AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203810 MtrunA17_Chr8g0374991 96.817 597 19 0 1 597 1 597 0.0 1188
Msa1203810 MtrunA17_Chr3g0120631 41.971 548 304 8 11 554 12 549 6.53e-143 425
Msa1203810 MtrunA17_Chr7g0226361 38.600 557 311 10 15 561 13 548 1.72e-138 415
Msa1203810 MtrunA17_Chr6g0458321 39.107 560 321 9 5 560 21 564 1.62e-132 400
Msa1203810 MtrunA17_Chr3g0120571 49.338 302 148 4 11 310 12 310 5.08e-89 278
Msa1203810 MtrunA17_Chr3g0120581 36.923 195 119 2 360 554 5 195 1.28e-38 141
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203810 AT4G37030.1 65.603 564 192 1 1 562 1 564 0.0 764
Msa1203810 AT4G12680.1 42.697 534 282 6 28 552 28 546 2.91e-146 435
Msa1203810 AT5G40640.1 41.603 524 288 6 21 542 21 528 1.15e-137 413
Msa1203810 AT3G27390.2 39.789 568 318 7 21 586 21 566 5.90e-137 411
Msa1203810 AT3G27390.1 39.789 568 318 7 21 586 21 566 5.90e-137 411

Find 145 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAAACGTTGGGGTGATTT+TGG 0.073856 8_1:-58930658 Msa1203810:CDS
TAGAATCATTATCAAGATTT+TGG 0.149271 8_1:+58931144 None:intergenic
GCTGCTTTGATACTGATTAT+AGG 0.191136 8_1:-58930678 Msa1203810:CDS
AGATGTTTCTGAAAAGATTT+TGG 0.223952 8_1:-58926854 Msa1203810:CDS
GACCATCTTCTTTCGATATT+GGG 0.235654 8_1:+58928771 None:intergenic
ATCCAATCTTCTATAGAATT+AGG 0.257245 8_1:+58930930 None:intergenic
AGACCATCTTCTTTCGATAT+TGG 0.271551 8_1:+58928770 None:intergenic
ACCACTTGAGTTGGCTTTGA+TGG 0.278525 8_1:+58927671 None:intergenic
TGCCTCTATTATAGTATATC+AGG 0.289735 8_1:-58929175 Msa1203810:intron
GATAAGAGGCAAGGAATTAT+TGG 0.307588 8_1:-58927814 Msa1203810:CDS
GACCATTCAAGAAGTGAAAA+TGG 0.309864 8_1:-58928629 Msa1203810:CDS
TTTGGCATATGGTTGGGTTT+AGG 0.310250 8_1:-58930452 Msa1203810:CDS
AAATTAATTGTTACTTCAAA+AGG 0.318285 8_1:+58930598 None:intergenic
GGCATTATTTACTCATTCAT+TGG 0.319746 8_1:-58926923 Msa1203810:CDS
CGTAGTTCCTTCAAGTAACT+TGG 0.327610 8_1:+58929998 None:intergenic
TGTAATGAAGAAAATGAATA+TGG 0.331464 8_1:+58931000 None:intergenic
AGGCAATCCAATACCAACTA+TGG 0.334369 8_1:+58927725 None:intergenic
AGCCATGATACTAGTAATAA+AGG 0.337857 8_1:+58930959 None:intergenic
TTCCTAATTCTATAGAAGAT+TGG 0.351801 8_1:-58930932 Msa1203810:CDS
TGCCAGCTTTGTTTGGCATA+TGG 0.354484 8_1:-58930463 Msa1203810:CDS
GAATGAATTGTTAGGATGAT+TGG 0.364915 8_1:-58927006 Msa1203810:intron
ATTGCTTTGCCAGCTTTGTT+TGG 0.365895 8_1:-58930470 Msa1203810:CDS
GGCTTTGGTTACACATTCTC+AGG 0.376208 8_1:-58926881 Msa1203810:CDS
TTGGTTCTTCAATCCGGTTA+TGG 0.376453 8_1:-58927586 Msa1203810:CDS
AAGATTGTCAAACCAGCAAT+TGG 0.382683 8_1:+58929267 None:intergenic
AAGGCAGTTGTACTGTGGTT+AGG 0.385783 8_1:-58930051 Msa1203810:CDS
CAATCCAACAACTTGTCCTT+TGG 0.390148 8_1:+58927606 None:intergenic
GAAGCATCCATAGTTGGTAT+TGG 0.391313 8_1:-58927732 Msa1203810:CDS
TGTTTCCTGCACATGTGGCT+TGG 0.393525 8_1:-58930632 Msa1203810:CDS
GCTTTGTTTGGCATATGGTT+GGG 0.393957 8_1:-58930458 Msa1203810:CDS
TGTACCAGCCCTTGAACAAT+AGG 0.397217 8_1:+58929346 None:intergenic
GTTCTTGTTGGTGTTGGGTA+TGG 0.397301 8_1:-58930416 Msa1203810:CDS
AAGCAGATCAAATACTACTA+TGG 0.398252 8_1:-58928704 Msa1203810:CDS
GGTAGTGTTCTTGTTGGTGT+TGG 0.400483 8_1:-58930422 Msa1203810:CDS
TACTGATTATAGGAAACGTT+GGG 0.405547 8_1:-58930668 Msa1203810:CDS
GATCTTGAAGGAGCTAAGTT+TGG 0.406186 8_1:+58928661 None:intergenic
AAGATCTTTCCGTAGAGGTT+TGG 0.407048 8_1:-58928958 Msa1203810:CDS
ACAGTTTGTGTCCCAATTGC+TGG 0.407213 8_1:-58929279 Msa1203810:CDS
ATCCTTTATTACTAGTATCA+TGG 0.407218 8_1:-58930961 Msa1203810:exon
TGTCATTGCCAGCATTTCAT+TGG 0.408938 8_1:-58929229 Msa1203810:CDS
TCCTTGGATTTCAACTTTCG+AGG 0.417570 8_1:-58930384 Msa1203810:CDS
GTAGTGTTCTTGTTGGTGTT+GGG 0.422524 8_1:-58930421 Msa1203810:CDS
AGGTTGAAGACTTGGGATAA+TGG 0.424290 8_1:-58927474 Msa1203810:CDS
AAGTTTGGCATAAACATTGC+AGG 0.426495 8_1:+58928676 None:intergenic
ACAGATAAGGGTTATTAAGT+TGG 0.427835 8_1:-58927553 Msa1203810:CDS
GGTTCTCAAGGAACAGATAA+GGG 0.430454 8_1:-58927565 Msa1203810:CDS
AGCTTTGTTTGGCATATGGT+TGG 0.433383 8_1:-58930459 Msa1203810:CDS
AGGCAGTTGTACTGTGGTTA+GGG 0.434898 8_1:-58930050 Msa1203810:CDS
TTGATGAATATACGAATGAT+TGG 0.435343 8_1:-58928908 Msa1203810:CDS
TTCATATCCAAGTTACTTGA+AGG 0.443666 8_1:-58930005 Msa1203810:CDS
CAAAGGACAAGTTGTTGGAT+TGG 0.449625 8_1:-58927605 Msa1203810:CDS
TAGAGGTTTGGCTTATATAG+TGG 0.454344 8_1:-58928946 Msa1203810:CDS
CGAAACTTCCTTCTGTATGT+TGG 0.456021 8_1:+58926958 None:intergenic
ATCAGTATCAAAGCAGCAAT+AGG 0.464848 8_1:+58930684 None:intergenic
GTTCCTGCATGTGTGATTGT+AGG 0.467610 8_1:-58929432 Msa1203810:CDS
GTTGGATTGGTTCTTCAATC+CGG 0.471016 8_1:-58927592 Msa1203810:CDS
CAGACCAAAGGACAAGTTGT+TGG 0.471091 8_1:-58927610 Msa1203810:CDS
TTAACTCAGGATGGAACCTT+GGG 0.472086 8_1:-58930082 Msa1203810:intron
TTGGGACACAAACTGTTTCA+AGG 0.474502 8_1:+58929286 None:intergenic
TGTTCCTTGAGAACCATAAC+CGG 0.474914 8_1:+58927573 None:intergenic
AATTAATTGTTACTTCAAAA+GGG 0.479275 8_1:+58930599 None:intergenic
TGAGCAGCTCTAAGACCATC+AGG 0.483015 8_1:+58927438 None:intergenic
GATAAGGGTTATTAAGTTGG+TGG 0.485743 8_1:-58927550 Msa1203810:CDS
GAAAATAGCCAATGAAATGC+TGG 0.487880 8_1:+58929221 None:intergenic
TGGTTCTCAAGGAACAGATA+AGG 0.493510 8_1:-58927566 Msa1203810:CDS
ATAGCTGGTAGTGTTCTTGT+TGG 0.494389 8_1:-58930428 Msa1203810:CDS
AATTATGCAGGCTTTATTGT+GGG 0.495246 8_1:-58930708 Msa1203810:intron
ATGTGTGATTGTAGGGATAG+TGG 0.496279 8_1:-58929424 Msa1203810:CDS
TGGTTGGGTTTAGGTATAGC+TGG 0.496915 8_1:-58930443 Msa1203810:CDS
TCAAGTAACTTGGATATGAA+TGG 0.499939 8_1:+58930008 None:intergenic
CAGATCAGTGTAAGACACTA+AGG 0.500384 8_1:-58929961 Msa1203810:intron
GAGTCCATACCTATTGTTCA+AGG 0.501729 8_1:-58929355 Msa1203810:CDS
ATGAGGGACTGCGAGATAAG+AGG 0.502133 8_1:-58927828 Msa1203810:CDS
ACAGTCCAAGCCACATGTGC+AGG 0.503615 8_1:+58930627 None:intergenic
TTTAACTCAGGATGGAACCT+TGG 0.509087 8_1:-58930083 Msa1203810:intron
ACCATCTTCTTTCGATATTG+GGG 0.510188 8_1:+58928772 None:intergenic
ATAAACAAAGGTTGAAGACT+TGG 0.510371 8_1:-58927482 Msa1203810:CDS
CTTAGAGCTGCTCAAATTGA+GGG 0.513791 8_1:-58927429 Msa1203810:CDS
AACCATATGCCAAACAAAGC+TGG 0.514652 8_1:+58930461 None:intergenic
GTCTCTCTAACAGATCTTGA+AGG 0.514845 8_1:+58928649 None:intergenic
TATTTGGAGAAAGATCCTTC+TGG 0.517933 8_1:-58926823 Msa1203810:CDS
ATAGCAATTGCAGTGAATAG+AGG 0.521061 8_1:+58929384 None:intergenic
TCTTAGAGCTGCTCAAATTG+AGG 0.521338 8_1:-58927430 Msa1203810:CDS
GAAATTCTTGCACTGTATTG+TGG 0.522001 8_1:-58930336 Msa1203810:intron
CTGGTTTGACAATCTTTGTG+TGG 0.522927 8_1:-58929260 Msa1203810:CDS
GTTAATGAAGCATCCATAGT+TGG 0.525887 8_1:-58927738 Msa1203810:CDS
CAGCAATACACCACTTGAGT+TGG 0.526106 8_1:+58927662 None:intergenic
AGATTGTCAAACCAGCAATT+GGG 0.527536 8_1:+58929268 None:intergenic
AACCTGATATACTATAATAG+AGG 0.530458 8_1:+58929173 None:intergenic
AAATTATGCAGGCTTTATTG+TGG 0.530901 8_1:-58930709 Msa1203810:intron
AGGGTTATTAAGTTGGTGGA+AGG 0.531476 8_1:-58927546 Msa1203810:CDS
CATGATTTAATCAGCAGAGA+AGG 0.534133 8_1:-58929315 Msa1203810:CDS
ACACAAACTGTTTCAAGGAA+TGG 0.536385 8_1:+58929291 None:intergenic
TTTGGCTTATATAGTGGCAA+TGG 0.537383 8_1:-58928940 Msa1203810:CDS
GAAGTTTCGTCAAGTCGTTA+AGG 0.537989 8_1:-58926944 Msa1203810:CDS
TTCCTGCATGTGTGATTGTA+GGG 0.538034 8_1:-58929431 Msa1203810:CDS
CTATATAAGCCAAACCTCTA+CGG 0.539558 8_1:+58928949 None:intergenic
TCAAGAAGTGAAAATGGTGC+AGG 0.541464 8_1:-58928623 Msa1203810:intron
ATCCCTACAATCACACATGC+AGG 0.545339 8_1:+58929429 None:intergenic
TAAACAAAGGTTGAAGACTT+GGG 0.547144 8_1:-58927481 Msa1203810:CDS
CAGCCCTTGAACAATAGGTA+TGG 0.553845 8_1:+58929351 None:intergenic
GGGATTGTTTCCTGCACATG+TGG 0.554102 8_1:-58930637 Msa1203810:CDS
CAATCCGGTTATGGTTCTCA+AGG 0.559769 8_1:-58927577 Msa1203810:CDS
TATTGGTGGCGTGTGTTGCA+AGG 0.564281 8_1:+58931073 None:intergenic
TCCATCAAAGCCAACTCAAG+TGG 0.565812 8_1:-58927672 Msa1203810:CDS
ATACTGATTATAGGAAACGT+TGG 0.566056 8_1:-58930669 Msa1203810:CDS
GATCTTTACGAGTGGTTGCG+AGG 0.567463 8_1:-58927768 Msa1203810:CDS
CATACCTATTGTTCAAGGGC+TGG 0.568654 8_1:-58929350 Msa1203810:CDS
GGAAGGTGAAGTGAGATACT+TGG 0.570542 8_1:-58927529 Msa1203810:CDS
GCCCCAATATCGAAAGAAGA+TGG 0.573372 8_1:-58928773 Msa1203810:CDS
TGACTCATTATCATATCTGA+AGG 0.575441 8_1:+58930361 None:intergenic
GGTAGCTTATTGATTCCTGA+TGG 0.575995 8_1:-58927453 Msa1203810:CDS
CTTCTGGTAGATCAAGTACA+AGG 0.577363 8_1:-58926807 Msa1203810:CDS
AGGATGATTGGAATGATAAG+AGG 0.577930 8_1:-58926994 Msa1203810:CDS
AAAACAAGAAGGTATATTGG+TGG 0.579194 8_1:+58931059 None:intergenic
ACTGCCTTTGATAGTTCCCA+AGG 0.580385 8_1:+58930066 None:intergenic
TGTGTGATTGTAGGGATAGT+GGG 0.584834 8_1:-58929423 Msa1203810:CDS
GGAACCTTGGGAACTATCAA+AGG 0.586981 8_1:-58930070 Msa1203810:CDS
GCCTCGAAAGTTGAAATCCA+AGG 0.596159 8_1:+58930383 None:intergenic
ATGCTGGCAATGACAACAAG+AGG 0.599832 8_1:+58929237 None:intergenic
TAGGAAAGATCTTTCCGTAG+AGG 0.600407 8_1:-58928963 Msa1203810:CDS
CAAAGCTTCCAACATACAGA+AGG 0.602294 8_1:-58926966 Msa1203810:CDS
TTTCTACTCGAGGAAACAGT+GGG 0.608465 8_1:-58928732 Msa1203810:CDS
GATTGGCTCTATCTTAGAGA+GGG 0.610416 8_1:-58928891 Msa1203810:CDS
AATGTATTGCGACAGATATG+GGG 0.611258 8_1:-58927858 Msa1203810:intron
TCGCAACCACTCGTAAAGAT+CGG 0.616434 8_1:+58927770 None:intergenic
AAAATGAATATGGAAGTCAA+AGG 0.621465 8_1:+58931010 None:intergenic
AGATATGGGGAAATATGATG+AGG 0.623153 8_1:-58927845 Msa1203810:CDS
TGATTGGCTCTATCTTAGAG+AGG 0.623421 8_1:-58928892 Msa1203810:CDS
AGTCCATACCTATTGTTCAA+GGG 0.625840 8_1:-58929354 Msa1203810:CDS
GATAGTGGGACTAATTGTTG+AGG 0.633806 8_1:-58929409 Msa1203810:CDS
AACTCATTTCAACAGACCAA+AGG 0.636042 8_1:-58927622 Msa1203810:CDS
GGACTGCGAGATAAGAGGCA+AGG 0.639998 8_1:-58927823 Msa1203810:CDS
TATGGCACCAAGGAAAAGAG+CGG 0.642005 8_1:+58930875 None:intergenic
GATATGGGGAAATATGATGA+GGG 0.644477 8_1:-58927844 Msa1203810:CDS
CTTGTACTTGATCTACCAGA+AGG 0.644969 8_1:+58926808 None:intergenic
GTCTTACACTGATCTGAACA+AGG 0.649202 8_1:+58929968 None:intergenic
CAGCTGCCGATCTTTACGAG+TGG 0.654435 8_1:-58927776 Msa1203810:CDS
ATTGGCTCTATCTTAGAGAG+GGG 0.667912 8_1:-58928890 Msa1203810:CDS
AAATTGAGGGAATTTCCAGA+AGG 0.670524 8_1:-58927416 Msa1203810:intron
GTTTCCTCGAGTAGAAAACT+CGG 0.683978 8_1:+58928738 None:intergenic
TATCAAAGGCAGTTGTACTG+TGG 0.686468 8_1:-58930056 Msa1203810:CDS
GTTTGTAGAAGTGAATAACA+AGG 0.688747 8_1:+58927705 None:intergenic
ACTGATTATAGGAAACGTTG+GGG 0.698175 8_1:-58930667 Msa1203810:CDS
TTTGGCATAAACATTGCAGG+CGG 0.704279 8_1:+58928679 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAATTGTTACTTCAAAA+GGG + chr8_1:58927329-58927348 None:intergenic 15.0%
!!! AAATTAATTGTTACTTCAAA+AGG + chr8_1:58927330-58927349 None:intergenic 15.0%
!!! AAAATAATTAAGTGATTTTC+TGG + chr8_1:58928901-58928920 None:intergenic 15.0%
!!! ATTCAGAATTTTCAATTTTA+TGG - chr8_1:58929591-58929610 Msa1203810:intron 15.0%
!! TATTGTGATGTTAATTTATT+CGG - chr8_1:58930021-58930040 Msa1203810:CDS 15.0%
!!! TAGAATCATTATCAAGATTT+TGG + chr8_1:58926784-58926803 None:intergenic 20.0%
!! TGTAATGAAGAAAATGAATA+TGG + chr8_1:58926928-58926947 None:intergenic 20.0%
!!! AAAGAATAAAGAACCTTTTA+TGG + chr8_1:58927071-58927090 None:intergenic 20.0%
!! GTAACATAAAGTATGAAAAA+GGG + chr8_1:58927104-58927123 None:intergenic 20.0%
!! TGTAACATAAAGTATGAAAA+AGG + chr8_1:58927105-58927124 None:intergenic 20.0%
!!! TTTCTTGATATTTTTCTTGA+AGG - chr8_1:58927172-58927191 Msa1203810:intron 20.0%
!!! TTCTTGATATTTTTCTTGAA+GGG - chr8_1:58927173-58927192 Msa1203810:intron 20.0%
!!! ATTTTTCTTGAAAATTATGC+AGG - chr8_1:58927205-58927224 Msa1203810:intron 20.0%
!!! ATTTTTTTTTCATGTGTGTT+TGG - chr8_1:58927346-58927365 Msa1203810:intron 20.0%
!! ATTATTTCAATGTTACATAG+TGG - chr8_1:58927654-58927673 Msa1203810:CDS 20.0%
!! ATTATCAACTTATTAAGGTT+AGG - chr8_1:58928085-58928104 Msa1203810:intron 20.0%
!!! AATGATTGATCTTTTATTGT+TGG - chr8_1:58928120-58928139 Msa1203810:intron 20.0%
!! TTGAAATGACATAATCAATA+TGG + chr8_1:58928152-58928171 None:intergenic 20.0%
!! GTCATTTCAATTACAAATTT+CGG - chr8_1:58928162-58928181 Msa1203810:intron 20.0%
!! TCATTTCAATTACAAATTTC+GGG - chr8_1:58928163-58928182 Msa1203810:intron 20.0%
!!! ATCGACAAATTTTAATCTTA+GGG + chr8_1:58929509-58929528 None:intergenic 20.0%
!!! TATCGACAAATTTTAATCTT+AGG + chr8_1:58929510-58929529 None:intergenic 20.0%
!!! ATTTTATCTTAGATATTGTC+CGG + chr8_1:58929546-58929565 None:intergenic 20.0%
!!! TAACAAAACTACATTACTTT+TGG + chr8_1:58929727-58929746 None:intergenic 20.0%
!!! TAATGTAGTTTTGTTAGAAT+TGG - chr8_1:58929731-58929750 Msa1203810:intron 20.0%
!!! AAAGTTGTTTAAAACTTGTT+GGG + chr8_1:58929981-58930000 None:intergenic 20.0%
!!! AAAAGTTGTTTAAAACTTGT+TGG + chr8_1:58929982-58930001 None:intergenic 20.0%
!!! TTTTTGGAGTTAATAAACAA+AGG - chr8_1:58930431-58930450 Msa1203810:CDS 20.0%
!!! CAATATTAAGTTGATATGTA+TGG - chr8_1:58930587-58930606 Msa1203810:intron 20.0%
!! ACGTTTATTCCATAAAAAAA+GGG + chr8_1:58930745-58930764 None:intergenic 20.0%
!! AACGTTTATTCCATAAAAAA+AGG + chr8_1:58930746-58930765 None:intergenic 20.0%
!! AGTCAAATTTATCTAATAAC+AGG + chr8_1:58930884-58930903 None:intergenic 20.0%
!! CAAAAAACAAGAAGGTATAT+TGG + chr8_1:58926872-58926891 None:intergenic 25.0%
! TAATAGGTCAAAAAACAAGA+AGG + chr8_1:58926880-58926899 None:intergenic 25.0%
! GAGAAAAAAGGGAAATTAAT+AGG + chr8_1:58926896-58926915 None:intergenic 25.0%
! AAAATGAATATGGAAGTCAA+AGG + chr8_1:58926918-58926937 None:intergenic 25.0%
! ATCCTTTATTACTAGTATCA+TGG - chr8_1:58926964-58926983 Msa1203810:CDS 25.0%
! TTCCTAATTCTATAGAAGAT+TGG - chr8_1:58926993-58927012 Msa1203810:CDS 25.0%
! ATCCAATCTTCTATAGAATT+AGG + chr8_1:58926998-58927017 None:intergenic 25.0%
! AAGTATGAAAAAGGGTAAAA+GGG + chr8_1:58927096-58927115 None:intergenic 25.0%
! AAAGTATGAAAAAGGGTAAA+AGG + chr8_1:58927097-58927116 None:intergenic 25.0%
!!! ATGTTTTTTTTTGTGTTTGC+AGG - chr8_1:58927393-58927412 Msa1203810:intron 25.0%
!!! TGTTTTTTTTTGTGTTTGCA+GGG - chr8_1:58927394-58927413 Msa1203810:intron 25.0%
! AGTACAAAATGTTGTAATAG+TGG - chr8_1:58927733-58927752 Msa1203810:CDS 25.0%
! TATTTGCTTACATTTAACTC+AGG - chr8_1:58927830-58927849 Msa1203810:CDS 25.0%
! TTTGTTTATTTATGTGACGT+GGG - chr8_1:58928004-58928023 Msa1203810:intron 25.0%
! CAAAAAAACGTTATCTTAAC+TGG + chr8_1:58928047-58928066 None:intergenic 25.0%
! CGCAAATTATCAACTTATTA+AGG - chr8_1:58928080-58928099 Msa1203810:intron 25.0%
!! ATTTTCTCTAGCATTTTTGT+CGG - chr8_1:58928721-58928740 Msa1203810:CDS 25.0%
! AACCTGATATACTATAATAG+AGG + chr8_1:58928755-58928774 None:intergenic 25.0%
!!! ACCAAAATTGATTTTGAATG+AGG + chr8_1:58928868-58928887 None:intergenic 25.0%
! TTGATGAATATACGAATGAT+TGG - chr8_1:58929017-58929036 Msa1203810:intron 25.0%
! AGATAGGATAAGAAAACAAT+TGG + chr8_1:58929086-58929105 None:intergenic 25.0%
! CAAAGAATTACTATGACTAT+TGG + chr8_1:58929401-58929420 None:intergenic 25.0%
! AATTCTTTGTCTGTTAAGTT+TGG - chr8_1:58929412-58929431 Msa1203810:CDS 25.0%
!!! TTTTGTTAGAATTGGTTCAA+AGG - chr8_1:58929739-58929758 Msa1203810:intron 25.0%
! GTAATATATAACCCTAAGTA+AGG + chr8_1:58929861-58929880 None:intergenic 25.0%
! CAACTTGTGTTTAAATACTA+CGG - chr8_1:58929880-58929899 Msa1203810:intron 25.0%
! TCAAGGGTAATATTATAAAC+TGG + chr8_1:58929907-58929926 None:intergenic 25.0%
!! TTGGAAAAAGTTGTTCTTTT+TGG - chr8_1:58930415-58930434 Msa1203810:CDS 25.0%
! ATTGATATAACAATACCTTC+TGG + chr8_1:58930527-58930546 None:intergenic 25.0%
! TTTCATTCTTCATGTATGTT+TGG - chr8_1:58930619-58930638 Msa1203810:CDS 25.0%
!!! AGATGTTTCTGAAAAGATTT+TGG - chr8_1:58931071-58931090 Msa1203810:five_prime_UTR 25.0%
!!! GATTTTGGTTACTCATTATT+TGG - chr8_1:58931086-58931105 Msa1203810:five_prime_UTR 25.0%
! AAAACAAGAAGGTATATTGG+TGG + chr8_1:58926869-58926888 None:intergenic 30.0%
AGCCATGATACTAGTAATAA+AGG + chr8_1:58926969-58926988 None:intergenic 30.0%
!! AAATTATGCAGGCTTTATTG+TGG - chr8_1:58927216-58927235 Msa1203810:intron 30.0%
!! AATTATGCAGGCTTTATTGT+GGG - chr8_1:58927217-58927236 Msa1203810:intron 30.0%
! ATACTGATTATAGGAAACGT+TGG - chr8_1:58927256-58927275 Msa1203810:intron 30.0%
! TACTGATTATAGGAAACGTT+GGG - chr8_1:58927257-58927276 Msa1203810:intron 30.0%
TGACTCATTATCATATCTGA+AGG + chr8_1:58927567-58927586 None:intergenic 30.0%
GCTATAATATTGTTGTGTAG+CGG - chr8_1:58927757-58927776 Msa1203810:CDS 30.0%
CAATCGCAAATTGTAGAAAA+TGG + chr8_1:58927798-58927817 None:intergenic 30.0%
TCAAGTAACTTGGATATGAA+TGG + chr8_1:58927920-58927939 None:intergenic 30.0%
TTCATATCCAAGTTACTTGA+AGG - chr8_1:58927920-58927939 Msa1203810:intron 30.0%
CACGTCACATAAATAAACAA+AGG + chr8_1:58928005-58928024 None:intergenic 30.0%
! CTTTGTTTATTTATGTGACG+TGG - chr8_1:58928003-58928022 Msa1203810:intron 30.0%
ACAACTTATGACATGTTGAT+AGG - chr8_1:58928263-58928282 Msa1203810:intron 30.0%
TTGCTAATGATAGACATGTT+TGG + chr8_1:58928422-58928441 None:intergenic 30.0%
TGCCTCTATTATAGTATATC+AGG - chr8_1:58928750-58928769 Msa1203810:CDS 30.0%
! TCAATTTTACACTGAGACTT+AGG + chr8_1:58928806-58928825 None:intergenic 30.0%
! GCCTCATTCAAAATCAATTT+TGG - chr8_1:58928864-58928883 Msa1203810:intron 30.0%
!!! TAAGTGATTTTCTGGTTATG+TGG + chr8_1:58928893-58928912 None:intergenic 30.0%
CACAAAAAGGTCAAAAAAGA+AGG + chr8_1:58928938-58928957 None:intergenic 30.0%
! TTTGACCTTTTTGTGAATGT+AGG - chr8_1:58928943-58928962 Msa1203810:CDS 30.0%
TCTTTCCTACATTCACAAAA+AGG + chr8_1:58928951-58928970 None:intergenic 30.0%
CAATTGGAAGAAGTTTACTT+TGG + chr8_1:58929070-58929089 None:intergenic 30.0%
AAGCAGATCAAATACTACTA+TGG - chr8_1:58929221-58929240 Msa1203810:CDS 30.0%
TTTAATCTTAGGGATCACTT+TGG + chr8_1:58929499-58929518 None:intergenic 30.0%
ATCATTGATGTCGTGTAATT+TGG + chr8_1:58929647-58929666 None:intergenic 30.0%
! GCATTCTATGTTTGCATTTT+TGG + chr8_1:58929774-58929793 None:intergenic 30.0%
!! TGTTTAAAACTTGTTGGGTA+TGG + chr8_1:58929976-58929995 None:intergenic 30.0%
AAAATGTATTGCGACAGATA+TGG - chr8_1:58930065-58930084 Msa1203810:CDS 30.0%
AAATGTATTGCGACAGATAT+GGG - chr8_1:58930066-58930085 Msa1203810:CDS 30.0%
GTTTGTAGAAGTGAATAACA+AGG + chr8_1:58930223-58930242 None:intergenic 30.0%
ACAGATAAGGGTTATTAAGT+TGG - chr8_1:58930372-58930391 Msa1203810:CDS 30.0%
ATAAACAAAGGTTGAAGACT+TGG - chr8_1:58930443-58930462 Msa1203810:CDS 30.0%
TAAACAAAGGTTGAAGACTT+GGG - chr8_1:58930444-58930463 Msa1203810:CDS 30.0%
ATAAACATACACCAAAATGC+TGG - chr8_1:58930670-58930689 Msa1203810:CDS 30.0%
TAAACATACACCAAAATGCT+GGG - chr8_1:58930671-58930690 Msa1203810:CDS 30.0%
TATATCAAGACCTAACACTT+AGG - chr8_1:58930782-58930801 Msa1203810:intron 30.0%
GCAATGATGAATGAATTGTT+AGG - chr8_1:58930911-58930930 Msa1203810:CDS 30.0%
GAATGAATTGTTAGGATGAT+TGG - chr8_1:58930919-58930938 Msa1203810:CDS 30.0%
GGCATTATTTACTCATTCAT+TGG - chr8_1:58931002-58931021 Msa1203810:five_prime_UTR 30.0%
GGAAGTCAAAGGAGAAAAAA+GGG + chr8_1:58926907-58926926 None:intergenic 35.0%
TGGAAGTCAAAGGAGAAAAA+AGG + chr8_1:58926908-58926927 None:intergenic 35.0%
ATCAGTATCAAAGCAGCAAT+AGG + chr8_1:58927244-58927263 None:intergenic 35.0%
! GCTGCTTTGATACTGATTAT+AGG - chr8_1:58927247-58927266 Msa1203810:intron 35.0%
ACTGATTATAGGAAACGTTG+GGG - chr8_1:58927258-58927277 Msa1203810:intron 35.0%
GAAATTCTTGCACTGTATTG+TGG - chr8_1:58927589-58927608 Msa1203810:CDS 35.0%
TCGCAAATTGTAGAAAATGG+AGG + chr8_1:58927795-58927814 None:intergenic 35.0%
TCTACAATTTGCGATTGACA+AGG - chr8_1:58927801-58927820 Msa1203810:CDS 35.0%
TGCTTACATTTAACTCAGGA+TGG - chr8_1:58927834-58927853 Msa1203810:CDS 35.0%
CTTATTAAGGTTAGGTCGTT+TGG - chr8_1:58928093-58928112 Msa1203810:intron 35.0%
CATAAACTCTGCTTATTTGC+AGG - chr8_1:58928461-58928480 Msa1203810:intron 35.0%
ATAGCAATTGCAGTGAATAG+AGG + chr8_1:58928544-58928563 None:intergenic 35.0%
AGTCCATACCTATTGTTCAA+GGG - chr8_1:58928571-58928590 Msa1203810:intron 35.0%
CATGATTTAATCAGCAGAGA+AGG - chr8_1:58928610-58928629 Msa1203810:intron 35.0%
ACACAAACTGTTTCAAGGAA+TGG + chr8_1:58928637-58928656 None:intergenic 35.0%
AGATTGTCAAACCAGCAATT+GGG + chr8_1:58928660-58928679 None:intergenic 35.0%
AAGATTGTCAAACCAGCAAT+TGG + chr8_1:58928661-58928680 None:intergenic 35.0%
GAAAATAGCCAATGAAATGC+TGG + chr8_1:58928707-58928726 None:intergenic 35.0%
TTTACACTGAGACTTAGGAA+TGG + chr8_1:58928801-58928820 None:intergenic 35.0%
CTATATAAGCCAAACCTCTA+CGG + chr8_1:58928979-58928998 None:intergenic 35.0%
! TAGAGGTTTGGCTTATATAG+TGG - chr8_1:58928979-58928998 Msa1203810:intron 35.0%
! TTTGGCTTATATAGTGGCAA+TGG - chr8_1:58928985-58929004 Msa1203810:intron 35.0%
CAACAGAATAAATGGCAGAT+AGG + chr8_1:58929102-58929121 None:intergenic 35.0%
GTCGATGTCAACAGAATAAA+TGG + chr8_1:58929110-58929129 None:intergenic 35.0%
ACCATCTTCTTTCGATATTG+GGG + chr8_1:58929156-58929175 None:intergenic 35.0%
GACCATCTTCTTTCGATATT+GGG + chr8_1:58929157-58929176 None:intergenic 35.0%
AGACCATCTTCTTTCGATAT+TGG + chr8_1:58929158-58929177 None:intergenic 35.0%
AAGTTTGGCATAAACATTGC+AGG + chr8_1:58929252-58929271 None:intergenic 35.0%
GACCATTCAAGAAGTGAAAA+TGG - chr8_1:58929296-58929315 Msa1203810:CDS 35.0%
! CACCATTTTCACTTCTTGAA+TGG + chr8_1:58929301-58929320 None:intergenic 35.0%
TCGATAACAATATTCCGTTC+CGG - chr8_1:58929524-58929543 Msa1203810:intron 35.0%
ATCTTAGATATTGTCCGGAA+CGG + chr8_1:58929541-58929560 None:intergenic 35.0%
! TCACATTAGTTCTCATGAGT+TGG + chr8_1:58929572-58929591 None:intergenic 35.0%
TACACGACATCAATGATTTC+AGG - chr8_1:58929650-58929669 Msa1203810:intron 35.0%
AGAATGCACAAGATTTGATC+AGG - chr8_1:58929787-58929806 Msa1203810:intron 35.0%
CTAGGAGATGTATGCAAAAT+TGG + chr8_1:58929820-58929839 None:intergenic 35.0%
AATGTATTGCGACAGATATG+GGG - chr8_1:58930067-58930086 Msa1203810:CDS 35.0%
AGATATGGGGAAATATGATG+AGG - chr8_1:58930080-58930099 Msa1203810:intron 35.0%
GATATGGGGAAATATGATGA+GGG - chr8_1:58930081-58930100 Msa1203810:intron 35.0%
GATAAGAGGCAAGGAATTAT+TGG - chr8_1:58930111-58930130 Msa1203810:intron 35.0%
! GTTAATGAAGCATCCATAGT+TGG - chr8_1:58930187-58930206 Msa1203810:intron 35.0%
AACTCATTTCAACAGACCAA+AGG - chr8_1:58930303-58930322 Msa1203810:intron 35.0%
!! GATAAGGGTTATTAAGTTGG+TGG - chr8_1:58930375-58930394 Msa1203810:CDS 35.0%
AAATTGAGGGAATTTCCAGA+AGG - chr8_1:58930509-58930528 Msa1203810:CDS 35.0%
!!! ACCAGACTTCCCTTTTTTTA+TGG - chr8_1:58930733-58930752 Msa1203810:intron 35.0%
TCCATAAAAAAAGGGAAGTC+TGG + chr8_1:58930737-58930756 None:intergenic 35.0%
!! TGAAGGTGTTTAGCCAAATA+GGG + chr8_1:58930808-58930827 None:intergenic 35.0%
TAAGTTATTCCAAACGTACG+AGG - chr8_1:58930855-58930874 Msa1203810:intron 35.0%
AGGATGATTGGAATGATAAG+AGG - chr8_1:58930931-58930950 Msa1203810:CDS 35.0%
GGAGAAAGATGCTTCAAAAA+AGG - chr8_1:58931023-58931042 Msa1203810:five_prime_UTR 35.0%
AGATGCTTCAAAAAAGGCTT+TGG - chr8_1:58931029-58931048 Msa1203810:five_prime_UTR 35.0%
TATTTGGAGAAAGATCCTTC+TGG - chr8_1:58931102-58931121 Msa1203810:five_prime_UTR 35.0%
! TTCTTTTCCGCTCTTTTCCT+TGG - chr8_1:58927043-58927062 Msa1203810:intron 40.0%
!!! CTTTTCCTTGGTGCCATAAA+AGG - chr8_1:58927055-58927074 Msa1203810:intron 40.0%
! AAGAACCTTTTATGGCACCA+AGG + chr8_1:58927063-58927082 None:intergenic 40.0%
!! ATTGCTTTGCCAGCTTTGTT+TGG - chr8_1:58927455-58927474 Msa1203810:CDS 40.0%
AACCATATGCCAAACAAAGC+TGG + chr8_1:58927467-58927486 None:intergenic 40.0%
!! AGCTTTGTTTGGCATATGGT+TGG - chr8_1:58927466-58927485 Msa1203810:CDS 40.0%
!! GCTTTGTTTGGCATATGGTT+GGG - chr8_1:58927467-58927486 Msa1203810:CDS 40.0%
TTTGGCATATGGTTGGGTTT+AGG - chr8_1:58927473-58927492 Msa1203810:CDS 40.0%
! ATAGCTGGTAGTGTTCTTGT+TGG - chr8_1:58927497-58927516 Msa1203810:CDS 40.0%
! GTAGTGTTCTTGTTGGTGTT+GGG - chr8_1:58927504-58927523 Msa1203810:CDS 40.0%
! GGTATGGATTTTTCACTCCT+TGG - chr8_1:58927525-58927544 Msa1203810:CDS 40.0%
TCCTTGGATTTCAACTTTCG+AGG - chr8_1:58927541-58927560 Msa1203810:CDS 40.0%
TTTAACTCAGGATGGAACCT+TGG - chr8_1:58927842-58927861 Msa1203810:CDS 40.0%
TTAACTCAGGATGGAACCTT+GGG - chr8_1:58927843-58927862 Msa1203810:CDS 40.0%
TATCAAAGGCAGTTGTACTG+TGG - chr8_1:58927869-58927888 Msa1203810:intron 40.0%
CGTAGTTCCTTCAAGTAACT+TGG + chr8_1:58927930-58927949 None:intergenic 40.0%
GTCTTACACTGATCTGAACA+AGG + chr8_1:58927960-58927979 None:intergenic 40.0%
CAGATCAGTGTAAGACACTA+AGG - chr8_1:58927964-58927983 Msa1203810:intron 40.0%
ACACTAAGGTAATCATCACG+CGG - chr8_1:58927978-58927997 Msa1203810:intron 40.0%
TTCCTGCATGTGTGATTGTA+GGG - chr8_1:58928494-58928513 Msa1203810:intron 40.0%
ATGTGTGATTGTAGGGATAG+TGG - chr8_1:58928501-58928520 Msa1203810:intron 40.0%
TGTGTGATTGTAGGGATAGT+GGG - chr8_1:58928502-58928521 Msa1203810:intron 40.0%
!! GATAGTGGGACTAATTGTTG+AGG - chr8_1:58928516-58928535 Msa1203810:intron 40.0%
GAGTCCATACCTATTGTTCA+AGG - chr8_1:58928570-58928589 Msa1203810:intron 40.0%
TTGGGACACAAACTGTTTCA+AGG + chr8_1:58928642-58928661 None:intergenic 40.0%
! CTGGTTTGACAATCTTTGTG+TGG - chr8_1:58928665-58928684 Msa1203810:CDS 40.0%
TGTCATTGCCAGCATTTCAT+TGG - chr8_1:58928696-58928715 Msa1203810:CDS 40.0%
TAGGAAAGATCTTTCCGTAG+AGG - chr8_1:58928962-58928981 Msa1203810:CDS 40.0%
AAGATCTTTCCGTAGAGGTT+TGG - chr8_1:58928967-58928986 Msa1203810:intron 40.0%
!! TGATTGGCTCTATCTTAGAG+AGG - chr8_1:58929033-58929052 Msa1203810:intron 40.0%
!! GATTGGCTCTATCTTAGAGA+GGG - chr8_1:58929034-58929053 Msa1203810:intron 40.0%
!! ATTGGCTCTATCTTAGAGAG+GGG - chr8_1:58929035-58929054 Msa1203810:intron 40.0%
GTTTCCTCGAGTAGAAAACT+CGG + chr8_1:58929190-58929209 None:intergenic 40.0%
! TTTTCTACTCGAGGAAACAG+TGG - chr8_1:58929192-58929211 Msa1203810:CDS 40.0%
TTTCTACTCGAGGAAACAGT+GGG - chr8_1:58929193-58929212 Msa1203810:CDS 40.0%
TTTGGCATAAACATTGCAGG+CGG + chr8_1:58929249-58929268 None:intergenic 40.0%
GATCTTGAAGGAGCTAAGTT+TGG + chr8_1:58929267-58929286 None:intergenic 40.0%
GTCTCTCTAACAGATCTTGA+AGG + chr8_1:58929279-58929298 None:intergenic 40.0%
TCAAGAAGTGAAAATGGTGC+AGG - chr8_1:58929302-58929321 Msa1203810:CDS 40.0%
TCACTTGATTGATCGACATG+AGG + chr8_1:58929342-58929361 None:intergenic 40.0%
!! ATCTGTCTCTGAAACTGTAG+CGG - chr8_1:58929440-58929459 Msa1203810:CDS 40.0%
ATAATGTTACCCCTGCAGTA+TGG + chr8_1:58929931-58929950 None:intergenic 40.0%
GCAGGGGTAACATTATAAAC+TGG - chr8_1:58929935-58929954 Msa1203810:intron 40.0%
TGGGTATGGCTCATTGTTTA+CGG + chr8_1:58929962-58929981 None:intergenic 40.0%
! GAAGCATCCATAGTTGGTAT+TGG - chr8_1:58930193-58930212 Msa1203810:intron 40.0%
AGGCAATCCAATACCAACTA+TGG + chr8_1:58930203-58930222 None:intergenic 40.0%
CAATCCAACAACTTGTCCTT+TGG + chr8_1:58930322-58930341 None:intergenic 40.0%
CAAAGGACAAGTTGTTGGAT+TGG - chr8_1:58930320-58930339 Msa1203810:intron 40.0%
!! GTTGGATTGGTTCTTCAATC+CGG - chr8_1:58930333-58930352 Msa1203810:intron 40.0%
! TTGGTTCTTCAATCCGGTTA+TGG - chr8_1:58930339-58930358 Msa1203810:CDS 40.0%
TGTTCCTTGAGAACCATAAC+CGG + chr8_1:58930355-58930374 None:intergenic 40.0%
TGGTTCTCAAGGAACAGATA+AGG - chr8_1:58930359-58930378 Msa1203810:CDS 40.0%
GGTTCTCAAGGAACAGATAA+GGG - chr8_1:58930360-58930379 Msa1203810:CDS 40.0%
!! AGGGTTATTAAGTTGGTGGA+AGG - chr8_1:58930379-58930398 Msa1203810:CDS 40.0%
AGGTTGAAGACTTGGGATAA+TGG - chr8_1:58930451-58930470 Msa1203810:CDS 40.0%
!! GGTAGCTTATTGATTCCTGA+TGG - chr8_1:58930472-58930491 Msa1203810:CDS 40.0%
TCTTAGAGCTGCTCAAATTG+AGG - chr8_1:58930495-58930514 Msa1203810:CDS 40.0%
CTTAGAGCTGCTCAAATTGA+GGG - chr8_1:58930496-58930515 Msa1203810:CDS 40.0%
!! CTGAAGGTGTTTAGCCAAAT+AGG + chr8_1:58930809-58930828 None:intergenic 40.0%
CAAAGCTTCCAACATACAGA+AGG - chr8_1:58930959-58930978 Msa1203810:exon 40.0%
CGAAACTTCCTTCTGTATGT+TGG + chr8_1:58930970-58930989 None:intergenic 40.0%
GAAGTTTCGTCAAGTCGTTA+AGG - chr8_1:58930981-58931000 Msa1203810:five_prime_UTR 40.0%
CTTGTACTTGATCTACCAGA+AGG + chr8_1:58931120-58931139 None:intergenic 40.0%
CTTCTGGTAGATCAAGTACA+AGG - chr8_1:58931118-58931137 Msa1203810:five_prime_UTR 40.0%
TATGGCACCAAGGAAAAGAG+CGG + chr8_1:58927053-58927072 None:intergenic 45.0%
! AGGAAACGTTGGGGTGATTT+TGG - chr8_1:58927267-58927286 Msa1203810:intron 45.0%
! GGAAACGTTGGGGTGATTTT+GGG - chr8_1:58927268-58927287 Msa1203810:intron 45.0%
!! TGCCAGCTTTGTTTGGCATA+TGG - chr8_1:58927462-58927481 Msa1203810:CDS 45.0%
TGGTTGGGTTTAGGTATAGC+TGG - chr8_1:58927482-58927501 Msa1203810:CDS 45.0%
GGTAGTGTTCTTGTTGGTGT+TGG - chr8_1:58927503-58927522 Msa1203810:CDS 45.0%
!! GTTCTTGTTGGTGTTGGGTA+TGG - chr8_1:58927509-58927528 Msa1203810:CDS 45.0%
GCCTCGAAAGTTGAAATCCA+AGG + chr8_1:58927545-58927564 None:intergenic 45.0%
GGAACCTTGGGAACTATCAA+AGG - chr8_1:58927855-58927874 Msa1203810:intron 45.0%
! ACTGCCTTTGATAGTTCCCA+AGG + chr8_1:58927862-58927881 None:intergenic 45.0%
AAGGCAGTTGTACTGTGGTT+AGG - chr8_1:58927874-58927893 Msa1203810:intron 45.0%
AGGCAGTTGTACTGTGGTTA+GGG - chr8_1:58927875-58927894 Msa1203810:intron 45.0%
GTTCCTGCATGTGTGATTGT+AGG - chr8_1:58928493-58928512 Msa1203810:intron 45.0%
ATCCCTACAATCACACATGC+AGG + chr8_1:58928499-58928518 None:intergenic 45.0%
CAGCCCTTGAACAATAGGTA+TGG + chr8_1:58928577-58928596 None:intergenic 45.0%
CATACCTATTGTTCAAGGGC+TGG - chr8_1:58928575-58928594 Msa1203810:intron 45.0%
TGTACCAGCCCTTGAACAAT+AGG + chr8_1:58928582-58928601 None:intergenic 45.0%
ACAGTTTGTGTCCCAATTGC+TGG - chr8_1:58928646-58928665 Msa1203810:CDS 45.0%
ATGCTGGCAATGACAACAAG+AGG + chr8_1:58928691-58928710 None:intergenic 45.0%
ACATCAACTTTCTTGCAGCC+AGG - chr8_1:58929130-58929149 Msa1203810:intron 45.0%
GCCCCAATATCGAAAGAAGA+TGG - chr8_1:58929152-58929171 Msa1203810:intron 45.0%
ATACATCTCCTAGTGCAGAG+TGG - chr8_1:58929827-58929846 Msa1203810:intron 45.0%
TTACCCTTGAACCATACTGC+AGG - chr8_1:58929917-58929936 Msa1203810:intron 45.0%
TACCCTTGAACCATACTGCA+GGG - chr8_1:58929918-58929937 Msa1203810:intron 45.0%
TCGCAACCACTCGTAAAGAT+CGG + chr8_1:58930158-58930177 None:intergenic 45.0%
TCCATCAAAGCCAACTCAAG+TGG - chr8_1:58930253-58930272 Msa1203810:intron 45.0%
!! ACCACTTGAGTTGGCTTTGA+TGG + chr8_1:58930257-58930276 None:intergenic 45.0%
CAGCAATACACCACTTGAGT+TGG + chr8_1:58930266-58930285 None:intergenic 45.0%
CAGACCAAAGGACAAGTTGT+TGG - chr8_1:58930315-58930334 Msa1203810:intron 45.0%
CAATCCGGTTATGGTTCTCA+AGG - chr8_1:58930348-58930367 Msa1203810:CDS 45.0%
GGAAGGTGAAGTGAGATACT+TGG - chr8_1:58930396-58930415 Msa1203810:CDS 45.0%
CCAAATAGGGCCTAAGTGTT+AGG + chr8_1:58930795-58930814 None:intergenic 45.0%
CCTAACACTTAGGCCCTATT+TGG - chr8_1:58930792-58930811 Msa1203810:intron 45.0%
TGGCTAAACACCTTCAGACA+AGG - chr8_1:58930812-58930831 Msa1203810:intron 45.0%
GGCTAAACACCTTCAGACAA+GGG - chr8_1:58930813-58930832 Msa1203810:intron 45.0%
TGACATAAGCCCTTGTCTGA+AGG + chr8_1:58930825-58930844 None:intergenic 45.0%
AACAGGTTACCTCGTACGTT+TGG + chr8_1:58930867-58930886 None:intergenic 45.0%
! GGCTTTGGTTACACATTCTC+AGG - chr8_1:58931044-58931063 Msa1203810:five_prime_UTR 45.0%
!! TATTGGTGGCGTGTGTTGCA+AGG + chr8_1:58926855-58926874 None:intergenic 50.0%
GGGATTGTTTCCTGCACATG+TGG - chr8_1:58927288-58927307 Msa1203810:intron 50.0%
TGTTTCCTGCACATGTGGCT+TGG - chr8_1:58927293-58927312 Msa1203810:intron 50.0%
CTTCTTTCGATATTGGGGCC+TGG + chr8_1:58929151-58929170 None:intergenic 50.0%
! TCGTCCGAGTTTTCTACTCG+AGG - chr8_1:58929183-58929202 Msa1203810:CDS 50.0%
TGGCTGCAGTGCCTTACTTA+GGG - chr8_1:58929847-58929866 Msa1203810:intron 50.0%
ACCCTTGAACCATACTGCAG+GGG - chr8_1:58929919-58929938 Msa1203810:intron 50.0%
ACCCCTGCAGTATGGTTCAA+GGG + chr8_1:58929923-58929942 None:intergenic 50.0%
TACCCCTGCAGTATGGTTCA+AGG + chr8_1:58929924-58929943 None:intergenic 50.0%
ATGAGGGACTGCGAGATAAG+AGG - chr8_1:58930097-58930116 Msa1203810:intron 50.0%
GATCTTTACGAGTGGTTGCG+AGG - chr8_1:58930157-58930176 Msa1203810:intron 50.0%
!! TGAGCAGCTCTAAGACCATC+AGG + chr8_1:58930490-58930509 None:intergenic 50.0%
ACAGTCCAAGCCACATGTGC+AGG + chr8_1:58927301-58927320 None:intergenic 55.0%
GTGGCTGCAGTGCCTTACTT+AGG - chr8_1:58929846-58929865 Msa1203810:intron 55.0%
GGACTGCGAGATAAGAGGCA+AGG - chr8_1:58930102-58930121 Msa1203810:intron 55.0%
CAGCTGCCGATCTTTACGAG+TGG - chr8_1:58930149-58930168 Msa1203810:intron 55.0%
! AGGAAGGGGTCCCAGCATTT+TGG + chr8_1:58930684-58930703 None:intergenic 55.0%
!! CATGCGCAGGTTCTAGGAAG+GGG + chr8_1:58930698-58930717 None:intergenic 55.0%
!! GCATGCGCAGGTTCTAGGAA+GGG + chr8_1:58930699-58930718 None:intergenic 55.0%
CTTCCTAGAACCTGCGCATG+CGG - chr8_1:58930698-58930717 Msa1203810:CDS 55.0%
TTCCTAGAACCTGCGCATGC+GGG - chr8_1:58930699-58930718 Msa1203810:CDS 55.0%
CACTGCAGCCACTCTGCACT+AGG + chr8_1:58929838-58929857 None:intergenic 60.0%
!! CGCATGCGCAGGTTCTAGGA+AGG + chr8_1:58930700-58930719 None:intergenic 60.0%
ACTAAAGCTCCCGCATGCGC+AGG + chr8_1:58930711-58930730 None:intergenic 60.0%
CTCCCGCATGCGCAGGTTCT+AGG + chr8_1:58930704-58930723 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 58926771 58931176 58926771 ID=Msa1203810;Name=Msa1203810
chr8_1 mRNA 58926771 58931176 58926771 ID=Msa1203810-mRNA-1;Parent=Msa1203810;Name=Msa1203810-mRNA-1;_AED=0.13;_eAED=0.13;_QI=212|0.87|0.33|0.88|1|1|9|0|597
chr8_1 exon 58926771 58927014 58926771 ID=Msa1203810-mRNA-1:exon:19075;Parent=Msa1203810-mRNA-1
chr8_1 exon 58927417 58927865 58927417 ID=Msa1203810-mRNA-1:exon:19074;Parent=Msa1203810-mRNA-1
chr8_1 exon 58928624 58928795 58928624 ID=Msa1203810-mRNA-1:exon:19073;Parent=Msa1203810-mRNA-1
chr8_1 exon 58928876 58928982 58928876 ID=Msa1203810-mRNA-1:exon:19072;Parent=Msa1203810-mRNA-1
chr8_1 exon 58929176 58929464 58929176 ID=Msa1203810-mRNA-1:exon:19071;Parent=Msa1203810-mRNA-1
chr8_1 exon 58929962 58930095 58929962 ID=Msa1203810-mRNA-1:exon:19070;Parent=Msa1203810-mRNA-1
chr8_1 exon 58930337 58930532 58930337 ID=Msa1203810-mRNA-1:exon:19069;Parent=Msa1203810-mRNA-1
chr8_1 exon 58930612 58930720 58930612 ID=Msa1203810-mRNA-1:exon:19068;Parent=Msa1203810-mRNA-1
chr8_1 exon 58930871 58931176 58930871 ID=Msa1203810-mRNA-1:exon:19067;Parent=Msa1203810-mRNA-1
chr8_1 five_prime_UTR 58930965 58931176 58930965 ID=Msa1203810-mRNA-1:five_prime_utr;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58930871 58930964 58930871 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58930612 58930720 58930612 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58930337 58930532 58930337 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58929962 58930095 58929962 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58929176 58929464 58929176 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58928876 58928982 58928876 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58928624 58928795 58928624 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58927417 58927865 58927417 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
chr8_1 CDS 58926771 58927014 58926771 ID=Msa1203810-mRNA-1:cds;Parent=Msa1203810-mRNA-1
Gene Sequence

>Msa1203810

ATGGCTTTTCTTCCTAATTCTATAGAAGATTGGATTAAAGCTTCTTATGTTGTTTTTGCATTCTTTTCCGCTCTTTTCCTTGGTGCCATAAAAGGCTTTATTGTGGGTCCTATTGCTGCTTTGATACTGATTATAGGAAACGTTGGGGTGATTTTGGGATTGTTTCCTGCACATGTGGCTTGGACTGTTTACACCCTTTTGAAGGTTGAAATATTTGATGCAGCTTTGAAAGTTGCTATTTTGATTGCTTTGCCAGCTTTGTTTGGCATATGGTTGGGTTTAGGTATAGCTGGTAGTGTTCTTGTTGGTGTTGGGTATGGATTTTTCACTCCTTGGATTTCAACTTTCGAGGCCTTCAGATATGATAATGAGTCAAAGAAATTCTTGCACTGTATTGTGGATGGAACCTTGGGAACTATCAAAGGCAGTTGTACTGTGGTTAGGGATTTTGCAGATTTATGTTACCATTCATATCCAAGTTACTTGAAGGAACTACGCGAATCACCTTGTTCAGATCAGTGTAAGACACTAAGGTTAATTCATGTTCCTGCATGTGTGATTGTAGGGATAGTGGGACTAATTGTTGAGGTTCCTCTATTCACTGCAATTGCTATAGTAAAGAGTCCATACCTATTGTTCAAGGGCTGGTACAGACTTTTGCATGATTTAATCAGCAGAGAAGGTCCATTCCTTGAAACAGTTTGTGTCCCAATTGCTGGTTTGACAATCTTTGTGTGGCCTCTTGTTGTCATTGCCAGCATTTCATTGGCTATTTTCTCTAGCATTTTTGTCGGACTATATGCCTCTATTATAGTATATCAGGAAAGATCTTTCCGTAGAGGTTTGGCTTATATAGTGGCAATGGTTGCTGAGTTTGATGAATATACGAATGATTGGCTCTATCTTAGAGAGGGGTCATACTTTCCAAAGCCCCAATATCGAAAGAAGATGGTCTCTCAATCGTCCGAGTTTTCTACTCGAGGAAACAGTGGGTCAGAAAGCAGATCAAATACTACTATGGAACCGCCTGCAATGTTTATGCCAAACTTAGCTCCTTCAAGATCTGTTAGAGAGACCATTCAAGAAGTGAAAATGGTGCAGATATGGGGAAATATGATGAGGGACTGCGAGATAAGAGGCAAGGAATTATTGGATGCTAATGTACTCACAGCTGCCGATCTTTACGAGTGGTTGCGAGGAAAAAATGTTAATGAAGCATCCATAGTTGGTATTGGATTGCCTTGTTATTCACTTCTACAAACACTTCTCTTTTCCATCAAAGCCAACTCAAGTGGTGTATTGCTGCTTGATGATTTCGAGATAACTCATTTCAACAGACCAAAGGACAAGTTGTTGGATTGGTTCTTCAATCCGGTTATGGTTCTCAAGGAACAGATAAGGGTTATTAAGTTGGTGGAAGGTGAAGTGAGATACTTGGAAAAAGTTGTTCTTTTTGGAGTTAATAAACAAAGGTTGAAGACTTGGGATAATGGTAGCTTATTGATTCCTGATGGTCTTAGAGCTGCTCAAATTGAGGGAATTTCCAGAAGGATGATTGGAATGATAAGAGGTGTATCAAAGCTTCCAACATACAGAAGGAAGTTTCGTCAAGTCGTTAAGGCATTATTTACTCATTCATTGGAGAAAGATGCTTCAAAAAAGGCTTTGGTTACACATTCTCAGGATAGAGATGTTTCTGAAAAGATTTTGGTTACTCATTATTTGGAGAAAGATCCTTCTGGTAGATCAAGTACAAGGTCTATAGTATCAGTTCCATCAGATGAAAATGTTTAA

Protein sequence

>Msa1203810

MAFLPNSIEDWIKASYVVFAFFSALFLGAIKGFIVGPIAALILIIGNVGVILGLFPAHVAWTVYTLLKVEIFDAALKVAILIALPALFGIWLGLGIAGSVLVGVGYGFFTPWISTFEAFRYDNESKKFLHCIVDGTLGTIKGSCTVVRDFADLCYHSYPSYLKELRESPCSDQCKTLRLIHVPACVIVGIVGLIVEVPLFTAIAIVKSPYLLFKGWYRLLHDLISREGPFLETVCVPIAGLTIFVWPLVVIASISLAIFSSIFVGLYASIIVYQERSFRRGLAYIVAMVAEFDEYTNDWLYLREGSYFPKPQYRKKMVSQSSEFSTRGNSGSESRSNTTMEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMRDCEIRGKELLDANVLTAADLYEWLRGKNVNEASIVGIGLPCYSLLQTLLFSIKANSSGVLLLDDFEITHFNRPKDKLLDWFFNPVMVLKEQIRVIKLVEGEVRYLEKVVLFGVNKQRLKTWDNGSLLIPDGLRAAQIEGISRRMIGMIRGVSKLPTYRRKFRQVVKALFTHSLEKDASKKALVTHSQDRDVSEKILVTHYLEKDPSGRSSTRSIVSVPSDENV*