Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161280 | XP_024626459.1 | 93.162 | 234 | 16 | 0 | 1 | 234 | 1 | 234 | 3.00e-157 | 453 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161280 | A0A396K1J8 | 93.162 | 234 | 16 | 0 | 1 | 234 | 1 | 234 | 1.43e-157 | 453 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040450 | Msa1161280 | 0.805264 | 1.452050e-49 | -8.615850e-47 |
| Msa0621590 | Msa1161280 | 0.804843 | 1.778196e-49 | -8.615850e-47 |
| Msa0638280 | Msa1161280 | 0.815003 | 1.154811e-51 | -8.615850e-47 |
| Msa0638320 | Msa1161280 | 0.819814 | 9.530356e-53 | -8.615850e-47 |
| Msa0647130 | Msa1161280 | 0.809661 | 1.694452e-50 | -8.615850e-47 |
| Msa0677270 | Msa1161280 | 0.821899 | 3.159629e-53 | -8.615850e-47 |
| Msa0754720 | Msa1161280 | -0.820289 | 7.420889e-53 | -8.615850e-47 |
| Msa0756630 | Msa1161280 | -0.821517 | 3.870890e-53 | -8.615850e-47 |
| Msa0760380 | Msa1161280 | 0.811643 | 6.319379e-51 | -8.615850e-47 |
| Msa0840260 | Msa1161280 | 0.807522 | 4.852452e-50 | -8.615850e-47 |
| Msa0222920 | Msa1161280 | 0.808813 | 2.575408e-50 | -8.615850e-47 |
| Msa0414170 | Msa1161280 | 0.800421 | 1.452912e-48 | -8.615850e-47 |
| Msa0990960 | Msa1161280 | 0.801292 | 9.645304e-49 | -8.615850e-47 |
| Msa1040120 | Msa1161280 | 0.828202 | 1.024646e-54 | -8.615850e-47 |
| Msa0311860 | Msa1161280 | 0.807621 | 4.622789e-50 | -8.615850e-47 |
| Msa0333720 | Msa1161280 | -0.805971 | 1.031487e-49 | -8.615850e-47 |
| Msa0334350 | Msa1161280 | 0.814504 | 1.489385e-51 | -8.615850e-47 |
| Msa1129250 | Msa1161280 | 0.826416 | 2.746310e-54 | -8.615850e-47 |
| Msa1139810 | Msa1161280 | 0.802586 | 5.230525e-49 | -8.615850e-47 |
| Msa1161280 | Msa1217860 | 0.819580 | 1.078081e-52 | -8.615850e-47 |
| Msa1161280 | Msa1222970 | 0.818107 | 2.329712e-52 | -8.615850e-47 |
| Msa1161280 | Msa1240310 | 0.803976 | 2.695590e-49 | -8.615850e-47 |
| Msa1161280 | Msa1242230 | 0.800101 | 1.687810e-48 | -8.615850e-47 |
| Msa1161280 | Msa1242240 | 0.807382 | 5.194194e-50 | -8.615850e-47 |
| Msa1161280 | Msa1264020 | 0.808843 | 2.537912e-50 | -8.615850e-47 |
| Msa1161280 | Msa1367080 | 0.812630 | 3.849336e-51 | -8.615850e-47 |
| Msa1161280 | Msa1427060 | 0.818920 | 1.523746e-52 | -8.615850e-47 |
| Msa1161280 | Msa1429150 | 0.817895 | 2.600315e-52 | -8.615850e-47 |
| Msa1161280 | Msa1439960 | 0.811684 | 6.190279e-51 | -8.615850e-47 |
| Msa0505770 | Msa1161280 | 0.804768 | 1.843484e-49 | -8.615850e-47 |
| Msa0521880 | Msa1161280 | 0.802259 | 6.106919e-49 | -8.615850e-47 |
| Msa0579390 | Msa1161280 | 0.801267 | 9.758272e-49 | -8.615850e-47 |
| Msa0850960 | Msa1161280 | 0.811337 | 7.365089e-51 | -8.615850e-47 |
| Msa0891040 | Msa1161280 | 0.815473 | 9.078043e-52 | -8.615850e-47 |
| Msa0894860 | Msa1161280 | 0.804796 | 1.818426e-49 | -8.615850e-47 |
| Msa0921600 | Msa1161280 | 0.806488 | 8.027335e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161280 | MtrunA17_Chr1g0206371 | 93.162 | 234 | 16 | 0 | 1 | 234 | 1 | 234 | 2.76e-161 | 453 |
| Msa1161280 | MtrunA17_Chr8g0380341 | 45.066 | 304 | 146 | 6 | 35 | 324 | 458 | 754 | 4.95e-76 | 253 |
| Msa1161280 | MtrunA17_Chr2g0305311 | 24.783 | 230 | 156 | 6 | 67 | 292 | 184 | 400 | 6.86e-16 | 79.7 |
| Msa1161280 | MtrunA17_Chr2g0309021 | 24.400 | 250 | 166 | 8 | 55 | 292 | 193 | 431 | 4.14e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1161280 | AT1G40087.1 | 21.824 | 307 | 214 | 12 | 68 | 367 | 81 | 368 | 4.43e-11 | 64.7 |
Find 72 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATTTCTTGACATTAAA+AGG | 0.128462 | 7_4:+51512914 | Msa1161270:intron |
| TCAAATCTCTTTCAATTTCT+TGG | 0.148267 | 7_4:-51513705 | Msa1161280:five_prime_UTR |
| CAAACCAGACCTTCCCTTTA+GGG | 0.251882 | 7_4:+51511931 | Msa1161270:intron |
| AGCCCAACTATAAGGATTTA+TGG | 0.254449 | 7_4:-51512246 | Msa1161280:CDS |
| TCTTCTTCACTTAAATCTTC+TGG | 0.269736 | 7_4:+51512618 | Msa1161270:intron |
| AGAAGGATAAGGATAATTTA+TGG | 0.271528 | 7_4:-51509759 | Msa1161280:three_prime_UTR |
| GCAAACCAGACCTTCCCTTT+AGG | 0.271614 | 7_4:+51511930 | Msa1161270:intron |
| ATATTGTAATTTGAAGAATT+TGG | 0.288634 | 7_4:+51513261 | Msa1161270:intron |
| TATCACCTAGAAGCTGGATA+TGG | 0.294596 | 7_4:-51512049 | Msa1161280:CDS |
| TGCATCTCTGAATCATGATT+TGG | 0.294739 | 7_4:+51513288 | Msa1161270:intron |
| ATTTACAGGAAATTAGTAAA+AGG | 0.297837 | 7_4:-51512471 | Msa1161280:intron |
| TGTCCCCATATCCAGCTTCT+AGG | 0.304977 | 7_4:+51512044 | Msa1161270:intron |
| CAAGATAGTATCAAAAGTTT+TGG | 0.320956 | 7_4:-51512867 | Msa1161280:intron |
| GCATCTCTGAATCATGATTT+GGG | 0.321535 | 7_4:+51513289 | Msa1161270:intron |
| ATGCTACACTCTTACCCTTT+AGG | 0.329470 | 7_4:-51511425 | Msa1161280:intron |
| CTATCTCATTTGTCTTGTAT+TGG | 0.330663 | 7_4:+51512655 | Msa1161270:intron |
| TGTTATTCCGACAGATAAAA+TGG | 0.332881 | 7_4:-51513002 | Msa1161280:CDS |
| CGAAAAGGAGCCCAACTATA+AGG | 0.333005 | 7_4:-51512254 | Msa1161280:CDS |
| AAGATTTAAGTGAAGAAGAT+TGG | 0.343547 | 7_4:-51512614 | Msa1161280:CDS |
| GTTGGAAGAGGAAGAACTAT+TGG | 0.361557 | 7_4:-51513076 | Msa1161280:CDS |
| TTTGGAGTAAGAGAAGATAA+TGG | 0.384574 | 7_4:+51513831 | Msa1161270:intron |
| TCTCCATAAATCCTTATAGT+TGG | 0.384858 | 7_4:+51512243 | Msa1161270:intron |
| CGTAATGGGTACTATATGTT+TGG | 0.389156 | 7_4:+51513813 | Msa1161270:intron |
| AAGGCAACTAGGAGAAAATA+TGG | 0.390316 | 7_4:-51511780 | Msa1161280:CDS |
| TTTACTCATGAAACCGTAAT+GGG | 0.393617 | 7_4:+51513799 | Msa1161270:intron |
| CTCCATAAATCCTTATAGTT+GGG | 0.402475 | 7_4:+51512244 | Msa1161270:intron |
| AGAAATTGAAAGAGATTTGA+AGG | 0.403978 | 7_4:+51513708 | Msa1161270:intron |
| TCAGGATATTGTCGTGGCTT+GGG | 0.416808 | 7_4:-51511968 | Msa1161280:CDS |
| CAAACATATAGTACCCATTA+CGG | 0.429729 | 7_4:-51513812 | Msa1161280:five_prime_UTR |
| TCTCGTTACCTCCATTGTGC+AGG | 0.435169 | 7_4:+51513766 | Msa1161270:intron |
| ATCAGGATATTGTCGTGGCT+TGG | 0.440491 | 7_4:-51511969 | Msa1161280:CDS |
| ATCACCTAGAAGCTGGATAT+GGG | 0.443128 | 7_4:-51512048 | Msa1161280:CDS |
| TATTGTCGTGGCTTGGGAGC+TGG | 0.446927 | 7_4:-51511962 | Msa1161280:CDS |
| AAACCCCTAAAGGGAAGGTC+TGG | 0.453319 | 7_4:-51511935 | Msa1161280:CDS |
| CAAGACAAATGAGATAGCTT+TGG | 0.454080 | 7_4:-51512649 | Msa1161280:CDS |
| TTGAAATTGCAGGTCAAGTA+AGG | 0.461734 | 7_4:-51509945 | Msa1161280:intron |
| GAATTGATATTGTTTCTAGC+TGG | 0.472059 | 7_4:-51509870 | Msa1161280:exon |
| ACACAAACAGCAACGGAGAA+TGG | 0.474002 | 7_4:-51512213 | Msa1161280:CDS |
| TCAGTTGTGGGAGAGCGATC+AGG | 0.476415 | 7_4:-51511986 | Msa1161280:CDS |
| TTGGAGTAAGAGAAGATAAT+GGG | 0.479906 | 7_4:+51513832 | Msa1161270:intron |
| AGCTGGAATTAAACCCCTAA+AGG | 0.483125 | 7_4:-51511945 | Msa1161280:CDS |
| TGAAGAAGATTGGAAGTACT+TGG | 0.484679 | 7_4:-51512604 | Msa1161280:CDS |
| AAAATGGTAGCTGTTGGATC+AGG | 0.488074 | 7_4:-51512986 | Msa1161280:CDS |
| TTTGCAAGAACAATTAGAAA+AGG | 0.490497 | 7_4:-51511912 | Msa1161280:CDS |
| CAGCACAAGCAGTACCTAAA+GGG | 0.491136 | 7_4:+51511411 | Msa1161270:intron |
| CTCGTTACCTCCATTGTGCA+GGG | 0.492548 | 7_4:+51513767 | Msa1161270:intron |
| TCTTCATATCACCTAGAAGC+TGG | 0.509469 | 7_4:-51512055 | Msa1161280:CDS |
| GCTGGAATTAAACCCCTAAA+GGG | 0.516789 | 7_4:-51511944 | Msa1161280:CDS |
| TACAAACATACCTTGAAGTC+AGG | 0.516893 | 7_4:+51512564 | Msa1161270:intron |
| GAGAGATCCTGAAACCGAAA+AGG | 0.518839 | 7_4:-51512269 | Msa1161280:CDS |
| GAAGAGAGTCAAAGGCAACT+AGG | 0.523426 | 7_4:-51511791 | Msa1161280:CDS |
| ACAGATAAAATGGTAGCTGT+TGG | 0.537238 | 7_4:-51512992 | Msa1161280:CDS |
| CAAAATTTGAAGAGAGTCAA+AGG | 0.540392 | 7_4:-51511799 | Msa1161280:CDS |
| CAAGTTATTAATCATAGATG+TGG | 0.560799 | 7_4:-51512427 | Msa1161280:CDS |
| GAGATACAGAGCAACACTAA+AGG | 0.575796 | 7_4:-51513745 | Msa1161280:five_prime_UTR |
| GAAGATTGGAAGTACTTGGT+AGG | 0.576273 | 7_4:-51512600 | Msa1161280:CDS |
| AAACATAACAAATAAAATTG+TGG | 0.580729 | 7_4:+51509845 | Msa1161270:intron |
| CATCTCTGAATCATGATTTG+GGG | 0.589533 | 7_4:+51513290 | Msa1161270:intron |
| AAACATGAGGGAAGAAATGA+CGG | 0.592296 | 7_4:-51511822 | Msa1161280:CDS |
| AATATAAGTCAACATCAAGA+AGG | 0.597106 | 7_4:-51513243 | Msa1161280:intron |
| AAACCAGACCTTCCCTTTAG+GGG | 0.599446 | 7_4:+51511932 | Msa1161270:intron |
| ATCTCTGAATCATGATTTGG+GGG | 0.607635 | 7_4:+51513291 | Msa1161270:intron |
| GAATTAAACCCCTAAAGGGA+AGG | 0.614459 | 7_4:-51511940 | Msa1161280:CDS |
| TCACCTAGAAGCTGGATATG+GGG | 0.621320 | 7_4:-51512047 | Msa1161280:CDS |
| TAAGAAACCCTGCACAATGG+AGG | 0.621338 | 7_4:-51513774 | Msa1161280:five_prime_UTR |
| AAATATGGAGAAACGAGTTG+AGG | 0.625492 | 7_4:-51511765 | Msa1161280:CDS |
| AAGTAAGAAACCCTGCACAA+TGG | 0.625591 | 7_4:-51513777 | Msa1161280:five_prime_UTR |
| AATGTCTGAACTTGTTCACA+AGG | 0.634831 | 7_4:-51511540 | Msa1161280:CDS |
| TCAAGCTGTTAGCTATGATG+CGG | 0.642379 | 7_4:-51512392 | Msa1161280:intron |
| TTATTAATCATAGATGTGGA+AGG | 0.653917 | 7_4:-51512423 | Msa1161280:CDS |
| GAGCGATCAGGATATTGTCG+TGG | 0.667913 | 7_4:-51511974 | Msa1161280:CDS |
| ATGACTCACACAAACAGCAA+CGG | 0.668395 | 7_4:-51512220 | Msa1161280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTAATATTTTTATA+GGG | - | chr7_4:51511988-51512007 | Msa1161280:CDS | 0.0% |
| !!! | TCATTTATTTTATTTAGTTA+TGG | - | chr7_4:51510268-51510287 | Msa1161280:intron | 10.0% |
| !!! | TTATTTCATTAAATTTGTTA+TGG | - | chr7_4:51511962-51511981 | Msa1161280:CDS | 10.0% |
| !!! | TATTTCATTAAATTTGTTAT+GGG | - | chr7_4:51511963-51511982 | Msa1161280:CDS | 10.0% |
| !!! | CTGTTTTTAAAATAAAAAAA+TGG | - | chr7_4:51512216-51512235 | Msa1161280:CDS | 10.0% |
| !!! | TTTTTAAAATAAAAAAATGG+AGG | - | chr7_4:51512219-51512238 | Msa1161280:CDS | 10.0% |
| !! | AAAAAAACTAATAATCATAA+TGG | + | chr7_4:51513799-51513818 | Msa1161270:intron | 10.0% |
| !! | ATATTGTAATTTGAAGAATT+TGG | + | chr7_4:51510326-51510345 | Msa1161270:intron | 15.0% |
| !! | AAGCAATCAATTAAATAAAA+AGG | + | chr7_4:51510760-51510779 | Msa1161270:intron | 15.0% |
| !! | TGATAAATATACCAAAAAAA+GGG | + | chr7_4:51511240-51511259 | Msa1161270:intron | 15.0% |
| !! | ATGATAAATATACCAAAAAA+AGG | + | chr7_4:51511241-51511260 | Msa1161270:intron | 15.0% |
| !! | TATGTTTAACAAATCAAAAA+AGG | + | chr7_4:51511433-51511452 | Msa1161270:intron | 15.0% |
| !!! | TTTACATTTTTAAATAGATG+AGG | - | chr7_4:51511494-51511513 | Msa1161280:intron | 15.0% |
| !!! | TTACATTTTTAAATAGATGA+GGG | - | chr7_4:51511495-51511514 | Msa1161280:intron | 15.0% |
| !!! | TTAATATTTTTATAGGGTAT+CGG | - | chr7_4:51511994-51512013 | Msa1161280:CDS | 15.0% |
| !! | AAATTAACGTATTAGAATAA+TGG | + | chr7_4:51513409-51513428 | Msa1161270:intron | 15.0% |
| !!! | AATTAATATTTTGAATAGGA+GGG | + | chr7_4:51513611-51513630 | Msa1161270:intron | 15.0% |
| !!! | ATCGAATTAATATTTTGAAT+AGG | + | chr7_4:51513615-51513634 | Msa1161270:intron | 15.0% |
| !! | AAACATAACAAATAAAATTG+TGG | + | chr7_4:51513742-51513761 | Msa1161270:intron | 15.0% |
| !!! | CATGAAATCAAACTATATTT+TGG | + | chr7_4:51509980-51509999 | Msa1161270:intron | 20.0% |
| !!! | AATTTTCCTTTGATCAATTT+TGG | - | chr7_4:51510017-51510036 | Msa1161280:intron | 20.0% |
| !!! | ATTTTACCAAAATTGATCAA+AGG | + | chr7_4:51510026-51510045 | Msa1161270:intron | 20.0% |
| !! | ATTTACAGGAAATTAGTAAA+AGG | - | chr7_4:51511113-51511132 | Msa1161280:intron | 20.0% |
| !!! | ATTTTGTGATGATGAAAATT+TGG | - | chr7_4:51511287-51511306 | Msa1161280:intron | 20.0% |
| !! | TGGTTATTTATATACTTACT+TGG | + | chr7_4:51511882-51511901 | Msa1161270:intron | 20.0% |
| !! | AGTATATAAATAACCATAGT+TGG | - | chr7_4:51511886-51511905 | Msa1161280:CDS | 20.0% |
| !!! | TTATATTTTTGTACCAACTA+TGG | + | chr7_4:51511902-51511921 | Msa1161270:intron | 20.0% |
| !!! | TAATTTTTTCTTGACTTTAG+TGG | - | chr7_4:51512097-51512116 | Msa1161280:intron | 20.0% |
| !! | AAATAAAAAAATGGAGGATA+AGG | - | chr7_4:51512225-51512244 | Msa1161280:CDS | 20.0% |
| !! | AATAAAAAAATGGAGGATAA+GGG | - | chr7_4:51512226-51512245 | Msa1161280:CDS | 20.0% |
| !! | GAGTTTATAAGATAATGAAT+AGG | - | chr7_4:51512340-51512359 | Msa1161280:intron | 20.0% |
| !! | TTTATAAGATAATGAATAGG+AGG | - | chr7_4:51512343-51512362 | Msa1161280:intron | 20.0% |
| !! | TTATAAGATAATGAATAGGA+GGG | - | chr7_4:51512344-51512363 | Msa1161280:intron | 20.0% |
| !! | TGGATTAATAAATCAAATGA+AGG | - | chr7_4:51512876-51512895 | Msa1161280:CDS | 20.0% |
| !! | AGAAGAAAAACTATTATGAA+AGG | - | chr7_4:51513020-51513039 | Msa1161280:CDS | 20.0% |
| !!! | AGTTTCTTTTAATACAGTTT+TGG | + | chr7_4:51513217-51513236 | Msa1161270:intron | 20.0% |
| !! | TTCAATCAAATAATATCTCA+TGG | - | chr7_4:51513302-51513321 | Msa1161280:exon | 20.0% |
| !!! | GAATTAATATTTTGAATAGG+AGG | + | chr7_4:51513612-51513631 | Msa1161270:intron | 20.0% |
| !!! | TTAGTTTTTTTGTGTTAAGA+AGG | - | chr7_4:51513808-51513827 | Msa1161280:five_prime_UTR | 20.0% |
| ! | AGAAATTGAAAGAGATTTGA+AGG | + | chr7_4:51509879-51509898 | Msa1161270:intron | 25.0% |
| ! | TCAAATCTCTTTCAATTTCT+TGG | - | chr7_4:51509879-51509898 | Msa1161280:exon | 25.0% |
| !!! | GAAATCAAACTATATTTTGG+AGG | + | chr7_4:51509977-51509996 | Msa1161270:intron | 25.0% |
| ! | AAAATGTTTGATTGCATGAA+TGG | - | chr7_4:51510041-51510060 | Msa1161280:intron | 25.0% |
| ! | AATATAAGTCAACATCAAGA+AGG | - | chr7_4:51510341-51510360 | Msa1161280:intron | 25.0% |
| !! | ACATTCTATAGCATTTTTAC+CGG | + | chr7_4:51510473-51510492 | Msa1161270:intron | 25.0% |
| !!! | CATTAAAAGGTGCATTTTTT+AGG | + | chr7_4:51510660-51510679 | Msa1161270:intron | 25.0% |
| !! | CAAGATAGTATCAAAAGTTT+TGG | - | chr7_4:51510717-51510736 | Msa1161280:intron | 25.0% |
| ! | AAGATTTAAGTGAAGAAGAT+TGG | - | chr7_4:51510970-51510989 | Msa1161280:intron | 25.0% |
| !!! | TTTCTACTTGTGTTATTTAC+AGG | - | chr7_4:51511099-51511118 | Msa1161280:intron | 25.0% |
| ! | CAAGTTATTAATCATAGATG+TGG | - | chr7_4:51511157-51511176 | Msa1161280:intron | 25.0% |
| ! | TTATTAATCATAGATGTGGA+AGG | - | chr7_4:51511161-51511180 | Msa1161280:intron | 25.0% |
| !!! | ATATCAAATCTCCCTTTTTT+TGG | - | chr7_4:51511226-51511245 | Msa1161280:intron | 25.0% |
| !!! | TATTGCTTTTAAATCAGTTG+TGG | - | chr7_4:51511585-51511604 | Msa1161280:intron | 25.0% |
| !!! | ATTGCTTTTAAATCAGTTGT+GGG | - | chr7_4:51511586-51511605 | Msa1161280:intron | 25.0% |
| ! | TTTGCAAGAACAATTAGAAA+AGG | - | chr7_4:51511672-51511691 | Msa1161280:intron | 25.0% |
| ! | TTGAAAAAGAGATAAACATG+AGG | - | chr7_4:51511749-51511768 | Msa1161280:CDS | 25.0% |
| ! | TGAAAAAGAGATAAACATGA+GGG | - | chr7_4:51511750-51511769 | Msa1161280:CDS | 25.0% |
| ! | AAAATTCCAAACAGTTCAAA+AGG | + | chr7_4:51512455-51512474 | Msa1161270:intron | 25.0% |
| !! | ATTGGTGTTTGAGATAAATA+TGG | - | chr7_4:51512702-51512721 | Msa1161280:CDS | 25.0% |
| ! | TTTCAATTATGATGATACCT+GGG | - | chr7_4:51512770-51512789 | Msa1161280:intron | 25.0% |
| ! | ACTTTGATTAAATAGCTAAG+TGG | - | chr7_4:51512825-51512844 | Msa1161280:intron | 25.0% |
| ! | ATTATGCAGAAAAATATGTG+TGG | - | chr7_4:51512950-51512969 | Msa1161280:CDS | 25.0% |
| ! | AGGTTAGAACTAATTAAACA+TGG | - | chr7_4:51513040-51513059 | Msa1161280:CDS | 25.0% |
| !! | ATTCCTAATTAGATTTGGTA+AGG | + | chr7_4:51513087-51513106 | Msa1161270:intron | 25.0% |
| ! | TTACCAAATCTAATTAGGAA+TGG | - | chr7_4:51513086-51513105 | Msa1161280:CDS | 25.0% |
| ! | TAACCATTCCTAATTAGATT+TGG | + | chr7_4:51513092-51513111 | Msa1161270:intron | 25.0% |
| !! | ATCAGTAATTTGAGGTTATA+GGG | + | chr7_4:51513123-51513142 | Msa1161270:intron | 25.0% |
| !! | TATCAGTAATTTGAGGTTAT+AGG | + | chr7_4:51513124-51513143 | Msa1161270:intron | 25.0% |
| ! | CAGTTTATATCAGTAATTTG+AGG | + | chr7_4:51513131-51513150 | Msa1161270:intron | 25.0% |
| ! | CTCAAATTACTGATATAAAC+TGG | - | chr7_4:51513129-51513148 | Msa1161280:intron | 25.0% |
| ! | GTAATCATGTATTAATGTTG+TGG | + | chr7_4:51513540-51513559 | Msa1161270:intron | 25.0% |
| !! | TTTTTGTGTTAAGAAGGATA+AGG | - | chr7_4:51513814-51513833 | Msa1161280:five_prime_UTR | 25.0% |
| ! | AGAAGGATAAGGATAATTTA+TGG | - | chr7_4:51513825-51513844 | Msa1161280:five_prime_UTR | 25.0% |
| TTGGAGTAAGAGAAGATAAT+GGG | + | chr7_4:51509755-51509774 | Msa1161270:intron | 30.0% | |
| ! | TTTGGAGTAAGAGAAGATAA+TGG | + | chr7_4:51509756-51509775 | Msa1161270:intron | 30.0% |
| CAAACATATAGTACCCATTA+CGG | - | chr7_4:51509772-51509791 | Msa1161280:three_prime_UTR | 30.0% | |
| TTTACTCATGAAACCGTAAT+GGG | + | chr7_4:51509788-51509807 | Msa1161270:intron | 30.0% | |
| ! | TTTTACTCATGAAACCGTAA+TGG | + | chr7_4:51509789-51509808 | Msa1161270:intron | 30.0% |
| !!! | TGTTAATGATTTTTTTCCGC+TGG | - | chr7_4:51510079-51510098 | Msa1161280:intron | 30.0% |
| TTCTCTCTCAATCAAAATCT+AGG | - | chr7_4:51510104-51510123 | Msa1161280:intron | 30.0% | |
| TCTCTCTCAATCAAAATCTA+GGG | - | chr7_4:51510105-51510124 | Msa1161280:intron | 30.0% | |
| TCAGTTTAATGTTGCTAAGA+GGG | - | chr7_4:51510193-51510212 | Msa1161280:intron | 30.0% | |
| !!! | TCTCTTCACTTTCTTTTTTC+CGG | - | chr7_4:51510451-51510470 | Msa1161280:intron | 30.0% |
| TGTTCTAATGCACAAAAAGT+TGG | - | chr7_4:51510490-51510509 | Msa1161280:intron | 30.0% | |
| TGTTATTCCGACAGATAAAA+TGG | - | chr7_4:51510582-51510601 | Msa1161280:intron | 30.0% | |
| ! | CACCTTTTAATGTCAAGAAA+TGG | - | chr7_4:51510668-51510687 | Msa1161280:intron | 30.0% |
| CTCCATTTCTTGACATTAAA+AGG | + | chr7_4:51510673-51510692 | Msa1161270:intron | 30.0% | |
| CTATCTCATTTGTCTTGTAT+TGG | + | chr7_4:51510932-51510951 | Msa1161270:intron | 30.0% | |
| TCTTCTTCACTTAAATCTTC+TGG | + | chr7_4:51510969-51510988 | Msa1161270:intron | 30.0% | |
| CTCCATAAATCCTTATAGTT+GGG | + | chr7_4:51511343-51511362 | Msa1161270:intron | 30.0% | |
| TCTCCATAAATCCTTATAGT+TGG | + | chr7_4:51511344-51511363 | Msa1161270:intron | 30.0% | |
| CAAAATTTGAAGAGAGTCAA+AGG | - | chr7_4:51511785-51511804 | Msa1161280:CDS | 30.0% | |
| !!! | ATATTTTTATAGGGTATCGG+CGG | - | chr7_4:51511997-51512016 | Msa1161280:CDS | 30.0% |
| ACTCAACGAGAAAAAGATTA+TGG | + | chr7_4:51512292-51512311 | Msa1161270:intron | 30.0% | |
| ! | AATCTTTTTCTCGTTGAGTT+TGG | - | chr7_4:51512293-51512312 | Msa1161280:intron | 30.0% |
| ! | TTCTAAGAACAGACTTAATG+AGG | - | chr7_4:51512473-51512492 | Msa1161280:intron | 30.0% |
| AACAGACTTAATGAGGAAAT+TGG | - | chr7_4:51512480-51512499 | Msa1161280:intron | 30.0% | |
| AAACAACACACGAAATTGTA+GGG | + | chr7_4:51512540-51512559 | Msa1161270:intron | 30.0% | |
| ! | TTGATTGGTGTTTGATTGAT+TGG | - | chr7_4:51512562-51512581 | Msa1161280:intron | 30.0% |
| ! | TGTTTGATTGATTGGTTGAT+TGG | - | chr7_4:51512570-51512589 | Msa1161280:intron | 30.0% |
| CATGTCTTCATATGTATGTT+AGG | - | chr7_4:51512640-51512659 | Msa1161280:CDS | 30.0% | |
| ! | AGTTTCATTCATGTGTTGTT+TGG | - | chr7_4:51512676-51512695 | Msa1161280:CDS | 30.0% |
| GTTTCAATTATGATGATACC+TGG | - | chr7_4:51512769-51512788 | Msa1161280:intron | 30.0% | |
| TCTACAACTTGTACGATATA+AGG | + | chr7_4:51512798-51512817 | Msa1161270:intron | 30.0% | |
| !! | AATATCCAAGTTCTAGGTAT+TGG | - | chr7_4:51512856-51512875 | Msa1161280:intron | 30.0% |
| TTAATCCAATACCTAGAACT+TGG | + | chr7_4:51512864-51512883 | Msa1161270:intron | 30.0% | |
| ATCAAATGAAGGTGATCATT+TGG | - | chr7_4:51512887-51512906 | Msa1161280:CDS | 30.0% | |
| TAATTATGCAGAAAATCCAG+AGG | + | chr7_4:51512934-51512953 | Msa1161270:intron | 30.0% | |
| GCACATAAAGAGTTTATACT+TGG | - | chr7_4:51512985-51513004 | Msa1161280:CDS | 30.0% | |
| ! | CTAATTAGATTTGGTAAGGT+TGG | + | chr7_4:51513083-51513102 | Msa1161270:intron | 30.0% |
| CAACCTTACCAAATCTAATT+AGG | - | chr7_4:51513081-51513100 | Msa1161280:CDS | 30.0% | |
| ! | TAAGTAGTCACTTTGAGTTA+TGG | + | chr7_4:51513183-51513202 | Msa1161270:intron | 30.0% |
| ATAACTCAAAGTGACTACTT+AGG | - | chr7_4:51513182-51513201 | Msa1161280:intron | 30.0% | |
| ACAAAAATAGACTTTGTCGT+TGG | - | chr7_4:51513258-51513277 | Msa1161280:CDS | 30.0% | |
| ATAATATCTCATGGTGTATC+TGG | - | chr7_4:51513311-51513330 | Msa1161280:intron | 30.0% | |
| TTCGATTATGTTGAAATTGC+AGG | - | chr7_4:51513629-51513648 | Msa1161280:intron | 30.0% | |
| !! | GAATTGATATTGTTTCTAGC+TGG | - | chr7_4:51513714-51513733 | Msa1161280:five_prime_UTR | 30.0% |
| !! | CGTAATGGGTACTATATGTT+TGG | + | chr7_4:51509774-51509793 | Msa1161270:intron | 35.0% |
| ! | CAGAATTCAAATTTTTCCCC+AGG | - | chr7_4:51509937-51509956 | Msa1161280:intron | 35.0% |
| !!! | TTGCATGAATGGCTTGTTTT+TGG | - | chr7_4:51510052-51510071 | Msa1161280:intron | 35.0% |
| !!! | TGCATGAATGGCTTGTTTTT+GGG | - | chr7_4:51510053-51510072 | Msa1161280:intron | 35.0% |
| TCACTGTGAATGTTGCTAAA+AGG | - | chr7_4:51510139-51510158 | Msa1161280:intron | 35.0% | |
| CACTGTGAATGTTGCTAAAA+GGG | - | chr7_4:51510140-51510159 | Msa1161280:intron | 35.0% | |
| ACTGTGAATGTTGCTAAAAG+GGG | - | chr7_4:51510141-51510160 | Msa1161280:intron | 35.0% | |
| TTGCTAAAAGGGGAAGAATT+CGG | - | chr7_4:51510151-51510170 | Msa1161280:intron | 35.0% | |
| GTCAGTTTAATGTTGCTAAG+AGG | - | chr7_4:51510192-51510211 | Msa1161280:intron | 35.0% | |
| CAGTTTAATGTTGCTAAGAG+GGG | - | chr7_4:51510194-51510213 | Msa1161280:intron | 35.0% | |
| ! | ATCTCTGAATCATGATTTGG+GGG | + | chr7_4:51510296-51510315 | Msa1161270:intron | 35.0% |
| CATCTCTGAATCATGATTTG+GGG | + | chr7_4:51510297-51510316 | Msa1161270:intron | 35.0% | |
| GCATCTCTGAATCATGATTT+GGG | + | chr7_4:51510298-51510317 | Msa1161270:intron | 35.0% | |
| TGCATCTCTGAATCATGATT+TGG | + | chr7_4:51510299-51510318 | Msa1161270:intron | 35.0% | |
| AATGCACAAAAAGTTGGAAG+AGG | - | chr7_4:51510496-51510515 | Msa1161280:intron | 35.0% | |
| ! | ACAGCTACCATTTTATCTGT+CGG | + | chr7_4:51510592-51510611 | Msa1161270:intron | 35.0% |
| ACAGATAAAATGGTAGCTGT+TGG | - | chr7_4:51510592-51510611 | Msa1161280:intron | 35.0% | |
| !!! | ATCTTGTTTTCTGTCTCTTG+TGG | + | chr7_4:51510703-51510722 | Msa1161270:intron | 35.0% |
| !!! | CGATTTTAATTGTTGAGTGC+AGG | - | chr7_4:51510803-51510822 | Msa1161280:intron | 35.0% |
| CAAGACAAATGAGATAGCTT+TGG | - | chr7_4:51510935-51510954 | Msa1161280:intron | 35.0% | |
| !! | TGAAGAAGATTGGAAGTACT+TGG | - | chr7_4:51510980-51510999 | Msa1161280:intron | 35.0% |
| !!! | TTTTTCAAGTCCTGACTTCA+AGG | - | chr7_4:51511010-51511029 | Msa1161280:intron | 35.0% |
| TACAAACATACCTTGAAGTC+AGG | + | chr7_4:51511023-51511042 | Msa1161270:intron | 35.0% | |
| AGCCCAACTATAAGGATTTA+TGG | - | chr7_4:51511338-51511357 | Msa1161280:intron | 35.0% | |
| AAACATGAGGGAAGAAATGA+CGG | - | chr7_4:51511762-51511781 | Msa1161280:CDS | 35.0% | |
| AAGGCAACTAGGAGAAAATA+TGG | - | chr7_4:51511804-51511823 | Msa1161280:CDS | 35.0% | |
| AAATATGGAGAAACGAGTTG+AGG | - | chr7_4:51511819-51511838 | Msa1161280:CDS | 35.0% | |
| ! | GAAACGAGTTGAGGAAAAAA+TGG | - | chr7_4:51511828-51511847 | Msa1161280:CDS | 35.0% |
| ! | AATGTCTGAACTTGTTCACA+AGG | - | chr7_4:51512044-51512063 | Msa1161280:CDS | 35.0% |
| !!! | GCTGTTTTGTTTTTCTGTTC+AGG | - | chr7_4:51512126-51512145 | Msa1161280:intron | 35.0% |
| ! | GTCTAACTCATGTGGTTTTT+AGG | - | chr7_4:51512250-51512269 | Msa1161280:CDS | 35.0% |
| !! | TAACTCATGTGGTTTTTAGG+TGG | - | chr7_4:51512253-51512272 | Msa1161280:CDS | 35.0% |
| GTTTGGTCATTGGATTATGT+TGG | - | chr7_4:51512310-51512329 | Msa1161280:intron | 35.0% | |
| CAAACAACACACGAAATTGT+AGG | + | chr7_4:51512541-51512560 | Msa1161270:intron | 35.0% | |
| ! | CTACAATTTCGTGTGTTGTT+TGG | - | chr7_4:51512539-51512558 | Msa1161280:intron | 35.0% |
| !! | TCATGTGTTGTTTGGTTGAT+TGG | - | chr7_4:51512684-51512703 | Msa1161280:CDS | 35.0% |
| CTAGAACTTGGATATTCCAA+GGG | + | chr7_4:51512852-51512871 | Msa1161270:intron | 35.0% | |
| ! | GTGATCATTTGGCTTATCTA+AGG | - | chr7_4:51512898-51512917 | Msa1161280:CDS | 35.0% |
| ! | TTGGCTTATCTAAGGACTTT+TGG | - | chr7_4:51512906-51512925 | Msa1161280:CDS | 35.0% |
| ! | ATATGTGTGGACATTAGCTT+AGG | - | chr7_4:51512963-51512982 | Msa1161280:CDS | 35.0% |
| ! | CATGGTGTATCTGGTTTATT+CGG | - | chr7_4:51513320-51513339 | Msa1161280:intron | 35.0% |
| ! | TATCTGGTTTATTCGGTACA+TGG | - | chr7_4:51513327-51513346 | Msa1161280:intron | 35.0% |
| AAGATTATACACAGTGAAGC+AGG | + | chr7_4:51513360-51513379 | Msa1161270:intron | 35.0% | |
| TTGAAATTGCAGGTCAAGTA+AGG | - | chr7_4:51513639-51513658 | Msa1161280:intron | 35.0% | |
| AAGTAAGAAACCCTGCACAA+TGG | - | chr7_4:51509807-51509826 | Msa1161280:three_prime_UTR | 40.0% | |
| GAGATACAGAGCAACACTAA+AGG | - | chr7_4:51509839-51509858 | Msa1161280:three_prime_UTR | 40.0% | |
| AGGCAGCAAAAAACTTACCT+GGG | + | chr7_4:51509957-51509976 | Msa1161270:intron | 40.0% | |
| !!! | GCATGAATGGCTTGTTTTTG+GGG | - | chr7_4:51510054-51510073 | Msa1161280:intron | 40.0% |
| TTGCTAAGAGGGGAAGAATT+GGG | - | chr7_4:51510204-51510223 | Msa1161280:intron | 40.0% | |
| GTTGGAAGAGGAAGAACTAT+TGG | - | chr7_4:51510508-51510527 | Msa1161280:intron | 40.0% | |
| !! | AAGAAAAAGAAGAGCGCTAC+TGG | - | chr7_4:51510547-51510566 | Msa1161280:intron | 40.0% |
| AAAATGGTAGCTGTTGGATC+AGG | - | chr7_4:51510598-51510617 | Msa1161280:intron | 40.0% | |
| ! | AGCTGCTAATTTTGTGACTG+AGG | - | chr7_4:51510621-51510640 | Msa1161280:intron | 40.0% |
| !! | GAAGATTGGAAGTACTTGGT+AGG | - | chr7_4:51510984-51511003 | Msa1161280:intron | 40.0% |
| TCAAGCTGTTAGCTATGATG+CGG | - | chr7_4:51511192-51511211 | Msa1161280:intron | 40.0% | |
| ! | CTTATAGTTGGGCTCCTTTT+CGG | + | chr7_4:51511332-51511351 | Msa1161270:intron | 40.0% |
| ATGACTCACACAAACAGCAA+CGG | - | chr7_4:51511364-51511383 | Msa1161280:intron | 40.0% | |
| TCTTCATATCACCTAGAAGC+TGG | - | chr7_4:51511529-51511548 | Msa1161280:CDS | 40.0% | |
| TATCACCTAGAAGCTGGATA+TGG | - | chr7_4:51511535-51511554 | Msa1161280:CDS | 40.0% | |
| ATCACCTAGAAGCTGGATAT+GGG | - | chr7_4:51511536-51511555 | Msa1161280:CDS | 40.0% | |
| AGCTGGAATTAAACCCCTAA+AGG | - | chr7_4:51511639-51511658 | Msa1161280:intron | 40.0% | |
| GCTGGAATTAAACCCCTAAA+GGG | - | chr7_4:51511640-51511659 | Msa1161280:intron | 40.0% | |
| GAATTAAACCCCTAAAGGGA+AGG | - | chr7_4:51511644-51511663 | Msa1161280:intron | 40.0% | |
| ATGCTACACTCTTACCCTTT+AGG | - | chr7_4:51512159-51512178 | Msa1161280:intron | 40.0% | |
| ATAAGGGAGTCTAACTCATG+TGG | - | chr7_4:51512242-51512261 | Msa1161280:CDS | 40.0% | |
| !!! | ATGTGGTTTTTAGGTGGCTA+AGG | - | chr7_4:51512259-51512278 | Msa1161280:CDS | 40.0% |
| TTCTCGTTGAGTTTGGTCAT+TGG | - | chr7_4:51512300-51512319 | Msa1161280:intron | 40.0% | |
| !! | ATAATGAATAGGAGGGCACT+GGG | - | chr7_4:51512351-51512370 | Msa1161280:intron | 40.0% |
| ! | TGCTGTCCTTTTGAACTGTT+TGG | - | chr7_4:51512446-51512465 | Msa1161280:CDS | 40.0% |
| !! | TCGTGTGTTGTTTGGTTGAT+TGG | - | chr7_4:51512547-51512566 | Msa1161280:intron | 40.0% |
| TAAATAGCTAAGTGGTCCCT+TGG | - | chr7_4:51512833-51512852 | Msa1161280:intron | 40.0% | |
| CCTAGAACTTGGATATTCCA+AGG | + | chr7_4:51512853-51512872 | Msa1161270:intron | 40.0% | |
| CCTTGGAATATCCAAGTTCT+AGG | - | chr7_4:51512850-51512869 | Msa1161280:intron | 40.0% | |
| !! | CTTTGTCGTTGGCTTAAATG+TGG | - | chr7_4:51513269-51513288 | Msa1161280:CDS | 40.0% |
| TAAGAAACCCTGCACAATGG+AGG | - | chr7_4:51509810-51509829 | Msa1161280:three_prime_UTR | 45.0% | |
| GGCAGCAAAAAACTTACCTG+GGG | + | chr7_4:51509956-51509975 | Msa1161270:intron | 45.0% | |
| GAGGCAGCAAAAAACTTACC+TGG | + | chr7_4:51509958-51509977 | Msa1161270:intron | 45.0% | |
| TGATTGAGAGAGAAAGCCAG+CGG | + | chr7_4:51510098-51510117 | Msa1161270:intron | 45.0% | |
| GTTGCTAAGAGGGGAAGAAT+TGG | - | chr7_4:51510203-51510222 | Msa1161280:intron | 45.0% | |
| AGAGGGGAAGAATTGGGAAT+TGG | - | chr7_4:51510210-51510229 | Msa1161280:intron | 45.0% | |
| GAGGGGAAGAATTGGGAATT+GGG | - | chr7_4:51510211-51510230 | Msa1161280:intron | 45.0% | |
| GAGAGATCCTGAAACCGAAA+AGG | - | chr7_4:51511315-51511334 | Msa1161280:intron | 45.0% | |
| CGAAAAGGAGCCCAACTATA+AGG | - | chr7_4:51511330-51511349 | Msa1161280:intron | 45.0% | |
| ACACAAACAGCAACGGAGAA+TGG | - | chr7_4:51511371-51511390 | Msa1161280:intron | 45.0% | |
| TCACCTAGAAGCTGGATATG+GGG | - | chr7_4:51511537-51511556 | Msa1161280:CDS | 45.0% | |
| ATCAGGATATTGTCGTGGCT+TGG | - | chr7_4:51511615-51511634 | Msa1161280:intron | 45.0% | |
| TCAGGATATTGTCGTGGCTT+GGG | - | chr7_4:51511616-51511635 | Msa1161280:intron | 45.0% | |
| AAACCAGACCTTCCCTTTAG+GGG | + | chr7_4:51511655-51511674 | Msa1161270:intron | 45.0% | |
| CAAACCAGACCTTCCCTTTA+GGG | + | chr7_4:51511656-51511675 | Msa1161270:intron | 45.0% | |
| GAAGAGAGTCAAAGGCAACT+AGG | - | chr7_4:51511793-51511812 | Msa1161280:CDS | 45.0% | |
| CAGCACAAGCAGTACCTAAA+GGG | + | chr7_4:51512176-51512195 | Msa1161270:intron | 45.0% | |
| ! | CTTTAGGTACTGCTTGTGCT+GGG | - | chr7_4:51512175-51512194 | Msa1161280:intron | 45.0% |
| ! | TTTAGGTACTGCTTGTGCTG+GGG | - | chr7_4:51512176-51512195 | Msa1161280:intron | 45.0% |
| ! | GATAATGAATAGGAGGGCAC+TGG | - | chr7_4:51512350-51512369 | Msa1161280:intron | 45.0% |
| ! | TTGGTTGATTGGTGTTCTGC+AGG | - | chr7_4:51512581-51512600 | Msa1161280:CDS | 45.0% |
| ! | TTGTACGATATAAGGCACCC+AGG | + | chr7_4:51512790-51512809 | Msa1161270:intron | 45.0% |
| ! | CTAAGGACTTTTGGTACCTC+TGG | - | chr7_4:51512915-51512934 | Msa1161280:CDS | 45.0% |
| ! | GCCAAGCTTTGTACATGTGT+CGG | - | chr7_4:51513505-51513524 | Msa1161280:intron | 45.0% |
| ACCGACACATGTACAAAGCT+TGG | + | chr7_4:51513509-51513528 | Msa1161270:intron | 45.0% | |
| ! | CTTTGTACATGTGTCGGTGT+TGG | - | chr7_4:51513511-51513530 | Msa1161280:intron | 45.0% |
| !!! | GTTATTTTTAATATTTTTAT+AGG | - | chr7_4:51511987-51512006 | Msa1161280:CDS | 5.0% |
| CTCGTTACCTCCATTGTGCA+GGG | + | chr7_4:51509820-51509839 | Msa1161270:intron | 50.0% | |
| TCTCGTTACCTCCATTGTGC+AGG | + | chr7_4:51509821-51509840 | Msa1161270:intron | 50.0% | |
| ! | TTGGGCTCCTTTTCGGTTTC+AGG | + | chr7_4:51511325-51511344 | Msa1161270:intron | 50.0% |
| TGTCCCCATATCCAGCTTCT+AGG | + | chr7_4:51511543-51511562 | Msa1161270:intron | 50.0% | |
| GAGCGATCAGGATATTGTCG+TGG | - | chr7_4:51511610-51511629 | Msa1161280:intron | 50.0% | |
| AAACCCCTAAAGGGAAGGTC+TGG | - | chr7_4:51511649-51511668 | Msa1161280:intron | 50.0% | |
| GCAAACCAGACCTTCCCTTT+AGG | + | chr7_4:51511657-51511676 | Msa1161270:intron | 50.0% | |
| CCAGCACAAGCAGTACCTAA+AGG | + | chr7_4:51512177-51512196 | Msa1161270:intron | 50.0% | |
| ! | CCTTTAGGTACTGCTTGTGC+TGG | - | chr7_4:51512174-51512193 | Msa1161280:intron | 50.0% |
| GGGCAATGCACACTGGATTA+TGG | + | chr7_4:51513591-51513610 | Msa1161270:intron | 50.0% | |
| AATAGGAGGGCAATGCACAC+TGG | + | chr7_4:51513598-51513617 | Msa1161270:intron | 50.0% | |
| TCAGTTGTGGGAGAGCGATC+AGG | - | chr7_4:51511598-51511617 | Msa1161280:intron | 55.0% | |
| ! | TATTGTCGTGGCTTGGGAGC+TGG | - | chr7_4:51511622-51511641 | Msa1161280:intron | 55.0% |
| GGTACTGCTTGTGCTGGGGT+TGG | - | chr7_4:51512180-51512199 | Msa1161280:intron | 60.0% | |
| !! | TGAATAGGAGGGCACTGGGC+AGG | - | chr7_4:51512355-51512374 | Msa1161280:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 51509728 | 51513878 | 51509728 | ID=Msa1161280;Name=Msa1161280 |
| chr7_4 | mRNA | 51509728 | 51513878 | 51509728 | ID=Msa1161280-mRNA-1;Parent=Msa1161280;Name=Msa1161280-mRNA-1;_AED=0.14;_eAED=0.14;_QI=233|0.66|0.7|0.9|0.88|0.9|10|158|429 |
| chr7_4 | exon | 51509728 | 51509955 | 51509728 | ID=Msa1161280-mRNA-1:exon:14582;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51511426 | 51511458 | 51511426 | ID=Msa1161280-mRNA-1:exon:14581;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51511515 | 51511597 | 51511515 | ID=Msa1161280-mRNA-1:exon:14580;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51511724 | 51512095 | 51511724 | ID=Msa1161280-mRNA-1:exon:14579;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51512186 | 51512290 | 51512186 | ID=Msa1161280-mRNA-1:exon:14578;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51512393 | 51512485 | 51512393 | ID=Msa1161280-mRNA-1:exon:14577;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51512575 | 51512781 | 51512575 | ID=Msa1161280-mRNA-1:exon:14576;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51512868 | 51513118 | 51512868 | ID=Msa1161280-mRNA-1:exon:14575;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51513244 | 51513321 | 51513244 | ID=Msa1161280-mRNA-1:exon:14574;Parent=Msa1161280-mRNA-1 |
| chr7_4 | exon | 51513648 | 51513878 | 51513648 | ID=Msa1161280-mRNA-1:exon:14573;Parent=Msa1161280-mRNA-1 |
| chr7_4 | five_prime_UTR | 51513648 | 51513878 | 51513648 | ID=Msa1161280-mRNA-1:five_prime_utr;Parent=Msa1161280-mRNA-1 |
| chr7_4 | five_prime_UTR | 51513320 | 51513321 | 51513320 | ID=Msa1161280-mRNA-1:five_prime_utr;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51513244 | 51513319 | 51513244 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51512868 | 51513118 | 51512868 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51512575 | 51512781 | 51512575 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51512393 | 51512485 | 51512393 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51512186 | 51512290 | 51512186 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51511724 | 51512095 | 51511724 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51511515 | 51511597 | 51511515 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51511426 | 51511458 | 51511426 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | CDS | 51509886 | 51509955 | 51509886 | ID=Msa1161280-mRNA-1:cds;Parent=Msa1161280-mRNA-1 |
| chr7_4 | three_prime_UTR | 51509728 | 51509885 | 51509728 | ID=Msa1161280-mRNA-1:three_prime_utr;Parent=Msa1161280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
