AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0505770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0505770 MtrunA17_Chr3g0107041 93.684 665 40 2 1 664 1 664 0.0 1188
Msa0505770 MtrunA17_Chr4g0047261 38.922 167 91 3 489 648 118 280 1.30e-21 95.9
Msa0505770 MtrunA17_Chr3g0139461 38.816 152 88 1 461 607 86 237 2.75e-21 95.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0505770 AT5G58370.3 75.806 310 72 2 355 664 158 464 3.61e-167 487
Msa0505770 AT5G58370.2 75.806 310 72 2 355 664 158 464 3.61e-167 487
Msa0505770 AT5G58370.1 75.261 287 68 2 355 641 158 441 5.51e-153 450
Msa0505770 AT5G11480.1 44.355 124 69 0 484 607 131 254 6.33e-25 106
Msa0505770 AT2G22870.1 33.333 213 125 3 443 648 81 283 1.11e-22 99.4

Find 155 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGAACTGATTGACTTAA+TGG 0.128958 3_4:-51398372 Msa0505770:CDS
TGATAAGGAAAATGGGTTTA+AGG 0.173720 3_4:-51402203 Msa0505770:CDS
GAGAGAGGTGATAGAGAAAA+TGG 0.190882 3_4:-51402364 Msa0505770:CDS
AGTTAATTAACATAAATTAA+TGG 0.225916 3_4:+51396231 None:intergenic
ACATAAATTAATGGCTAAAA+AGG 0.234227 3_4:+51396240 None:intergenic
GGCGCATGATAGAAATAAAA+AGG 0.238071 3_4:-51399927 Msa0505770:CDS
TGATAGGGAAAATGGGTATA+AGG 0.275651 3_4:-51402029 Msa0505770:CDS
TGGGCGTTCTGAGACATTTC+AGG 0.280707 3_4:+51400117 None:intergenic
TGATAGAGAAAATGGGTATA+AGG 0.292592 3_4:-51402356 Msa0505770:CDS
TAGGCTGTATTGCACGGAAT+TGG 0.304754 3_4:+51400097 None:intergenic
TTCATGGGAAGTGGATTTAT+AGG 0.312508 3_4:-51396065 Msa0505770:three_prime_UTR
ATAAATTAAACCATTGGAAT+TGG 0.316581 3_4:+51396107 None:intergenic
GTCAAATAAAGGATATAATA+AGG 0.318173 3_4:-51397653 Msa0505770:intron
TTAGTTGATTTGCCAGGATA+TGG 0.322044 3_4:-51399284 Msa0505770:CDS
GCACGTCGCGCCACATCAAT+TGG 0.323406 3_4:+51397976 None:intergenic
GTAAAAGATGAAGAGTTTAG+AGG 0.324819 3_4:-51402541 Msa0505770:CDS
TGATAGAGGAAATAGGTATA+AGG 0.326706 3_4:-51402458 Msa0505770:CDS
TATTCCTACGTGGTGTCTTC+AGG 0.327088 3_4:+51396335 None:intergenic
GATAAGGAAAATGGGTTTAA+GGG 0.327193 3_4:-51402202 Msa0505770:CDS
AGAGACGTGCCACATAAAAT+TGG 0.353346 3_4:+51396288 None:intergenic
AGGGAAGTTGAGAACTTCTA+AGG 0.353898 3_4:-51402104 Msa0505770:CDS
AAGAGAAATGAAGAGTTTAG+AGG 0.354265 3_4:-51402427 Msa0505770:CDS
CCCTTCAATACTTACCTTTG+TGG 0.354751 3_4:-51400073 Msa0505770:CDS
GATGATTCCATTGCTGTTGA+TGG 0.355744 3_4:-51401491 Msa0505770:intron
GATAGAGGAAATAGGTATAA+GGG 0.357678 3_4:-51402457 Msa0505770:CDS
ATGATTATGATAGAGGAAAT+AGG 0.357802 3_4:-51402465 Msa0505770:CDS
CTTCCGGAGATTGCATTTGC+TGG 0.361097 3_4:-51399647 Msa0505770:intron
GATAGAGAAAATGGGTATAA+GGG 0.364549 3_4:-51402355 Msa0505770:CDS
ATCATTACAATGGTGCTATC+TGG 0.367206 3_4:-51396030 Msa0505770:three_prime_UTR
GAAACCTTTGTTTAAGAAAA+GGG 0.369503 3_4:-51401819 Msa0505770:CDS
GACTTTAGAGGAAGGGAATC+AGG 0.377059 3_4:-51402160 Msa0505770:CDS
CTGTCTTGGTTAATACTATC+TGG 0.385303 3_4:+51398010 None:intergenic
CCGATGATGAACGTACAATC+TGG 0.385844 3_4:-51401760 Msa0505770:CDS
AGAAACCTTTGTTTAAGAAA+AGG 0.387621 3_4:-51401820 Msa0505770:CDS
CTCTTGTTTGAGATATCATA+TGG 0.387910 3_4:+51401518 None:intergenic
AGAAGAGAAGGAGAAGAAAA+AGG 0.388904 3_4:-51400154 Msa0505770:CDS
AAGGACAAGAAAGAAATTGA+TGG 0.389314 3_4:-51401680 Msa0505770:CDS
AGGCTGTATTGCACGGAATT+GGG 0.391617 3_4:+51400098 None:intergenic
AAGAAAAGGGTGGACTTTAG+AGG 0.393428 3_4:-51402172 Msa0505770:CDS
GAACGTACAATCTGGGATTT+CGG 0.397533 3_4:-51401752 Msa0505770:CDS
GATAGGGAAAATGGGTATAA+GGG 0.397826 3_4:-51402028 Msa0505770:CDS
GACAATAAACTTCTTCAACT+TGG 0.401509 3_4:-51399321 Msa0505770:CDS
TAGCTCGATTTGTCAAATAA+AGG 0.402383 3_4:-51397664 Msa0505770:exon
GTTTAAGAAAAGGGAGAAGA+AGG 0.405204 3_4:-51401810 Msa0505770:CDS
GAGAAGGGAATATTATCTAA+TGG 0.405851 3_4:+51399877 None:intergenic
TAATGCACTTACTAGACAAT+GGG 0.405934 3_4:-51399480 Msa0505770:CDS
TTCTTCAATGTTCTCTCTGT+CGG 0.408094 3_4:+51399846 None:intergenic
AACTTTAAAGGAACGGAATC+GGG 0.411357 3_4:-51401986 Msa0505770:CDS
AATTATAATTCACAGCTGTT+GGG 0.413429 3_4:-51399955 Msa0505770:intron
GACTTTGGAGGAACCGGATC+GGG 0.421078 3_4:-51402313 Msa0505770:CDS
TCCACAAAGGTAAGTATTGA+AGG 0.423833 3_4:+51400072 None:intergenic
ATTCCCTTGGTCAAATAGAA+TGG 0.431628 3_4:-51396196 Msa0505770:three_prime_UTR
ATTCCTCTCTTCACCCGATC+CGG 0.437243 3_4:+51402300 None:intergenic
ATTGGTTGGCCGGTGATGTT+AGG 0.439026 3_4:+51396125 None:intergenic
ACAATAAACTTCTTCAACTT+GGG 0.440946 3_4:-51399320 Msa0505770:CDS
ATGAAGAAAAGGGTGGACTT+TGG 0.442859 3_4:-51402328 Msa0505770:CDS
AATGCAATCTCCGGAAGATT+AGG 0.443410 3_4:+51399653 None:intergenic
AAACTTTAAAGGAACGGAAT+CGG 0.447386 3_4:-51401987 Msa0505770:CDS
GGTGAAAATGATTATGATAG+AGG 0.450608 3_4:-51402472 Msa0505770:CDS
AGAAGTAGAAAGGATGAGAA+TGG 0.452720 3_4:-51402247 Msa0505770:CDS
AGGGTGGACTTTGGAGGAAC+CGG 0.453893 3_4:-51402319 Msa0505770:CDS
CGCCACATCAATTGGGAAAA+CGG 0.454633 3_4:+51397984 None:intergenic
ATTTCCACCTCCTAATCTTC+CGG 0.464029 3_4:-51399663 Msa0505770:CDS
TCAATCAGTTCAATATCTCT+TGG 0.464126 3_4:+51398380 None:intergenic
TTTCAAAATGCTTGCAGCAT+AGG 0.467358 3_4:-51396150 Msa0505770:three_prime_UTR
GGTTGAATTACAGACTTGTT+CGG 0.468286 3_4:+51397840 None:intergenic
ATTAAACCATTGGAATTGGT+TGG 0.475377 3_4:+51396111 None:intergenic
ATGATGGCTAGCTCAAAATC+TGG 0.477405 3_4:-51397725 Msa0505770:CDS
AAAGGGTGGACTTTAGAGGA+AGG 0.482117 3_4:-51402168 Msa0505770:CDS
GAAGGGAATCAGGTGAAGAA+AGG 0.482320 3_4:-51402150 Msa0505770:CDS
TGGGAAAACGGTATCTGTCT+TGG 0.484355 3_4:+51397996 None:intergenic
AGGGAAGTTGAGAAGTAGAA+AGG 0.485019 3_4:-51402257 Msa0505770:CDS
GGACTTTGGAGGAACCGGAT+CGG 0.488246 3_4:-51402314 Msa0505770:CDS
AGAGAGGTGATAGAGAAAAT+GGG 0.489685 3_4:-51402363 Msa0505770:CDS
CTTAGCTTAGTTGATTTGCC+AGG 0.491612 3_4:-51399290 Msa0505770:CDS
ATAGTAATAAATTAAACCAT+TGG 0.497211 3_4:+51396101 None:intergenic
TCTTGTCAATAAGTTGACAT+TGG 0.497709 3_4:-51395968 Msa0505770:three_prime_UTR
ATAAGGGGAAGATGAAGAAA+AGG 0.498161 3_4:-51402339 Msa0505770:CDS
CACGTCGCGCCACATCAATT+GGG 0.502582 3_4:+51397977 None:intergenic
AGGGTATATGCTAATGAGGA+AGG 0.503049 3_4:-51401890 Msa0505770:CDS
GAACCTAGAATACCTGTGTA+TGG 0.504674 3_4:+51399429 None:intergenic
TTCAGGAAGTACAGAAGAGA+AGG 0.507107 3_4:-51400166 Msa0505770:intron
GAAGAGGGTATATGCTAATG+AGG 0.507461 3_4:-51401894 Msa0505770:CDS
ATTCACAGCTGTTGGGGAGG+AGG 0.510063 3_4:-51399948 Msa0505770:intron
GCTTTCAAATCAAAGTTTGA+AGG 0.510875 3_4:-51401699 Msa0505770:CDS
CAAGTCTGTAATTCAACCTC+TGG 0.514102 3_4:-51397835 Msa0505770:intron
GCATACGCAAATCCATATCC+TGG 0.515239 3_4:+51399272 None:intergenic
AGACGAAGTGAAAGAAGCTT+GGG 0.515480 3_4:-51399246 Msa0505770:CDS
AAGACGAAGTGAAAGAAGCT+TGG 0.522199 3_4:-51399247 Msa0505770:CDS
TTAATGCACTTACTAGACAA+TGG 0.524804 3_4:-51399481 Msa0505770:CDS
TTAAGGGGAAGATGAAGAAA+AGG 0.525378 3_4:-51402186 Msa0505770:CDS
CCAGATTGTACGTTCATCAT+CGG 0.525608 3_4:+51401760 None:intergenic
ATACCAGCAAATGCAATCTC+CGG 0.526546 3_4:+51399644 None:intergenic
GGATTTCGGTAAATTGAAGC+AGG 0.529223 3_4:-51401738 Msa0505770:CDS
CCACAAAGGTAAGTATTGAA+GGG 0.529256 3_4:+51400073 None:intergenic
GGACTAAATAGTTTATACAT+AGG 0.530408 3_4:-51395947 Msa0505770:three_prime_UTR
TTAGCATCATCTTCCAACCC+TGG 0.532299 3_4:+51401593 None:intergenic
AACCATTGGAATTGGTTGGC+CGG 0.535249 3_4:+51396115 None:intergenic
TTTGACAAATCGAGCTACGC+TGG 0.535258 3_4:+51397670 None:intergenic
TAGAATACCTGTGTATGGCC+AGG 0.542553 3_4:+51399434 None:intergenic
GAACGGAATCGGGTGAAGAA+AGG 0.545481 3_4:-51401976 Msa0505770:CDS
GCTAGCTCAAAATCTGGAGC+AGG 0.546793 3_4:-51397719 Msa0505770:CDS
CGATGATGAACGTACAATCT+GGG 0.549324 3_4:-51401759 Msa0505770:CDS
AAGAAAAGGGTGGACTTTGG+AGG 0.552587 3_4:-51402325 Msa0505770:CDS
AAGGTAAGTATTGAAGGGCT+AGG 0.555476 3_4:+51400078 None:intergenic
CTAACAGGAAAGTCAAATGT+TGG 0.557214 3_4:-51399518 Msa0505770:intron
ATTCACCTCTTCGATTTGCA+TGG 0.557235 3_4:+51397954 None:intergenic
AGAGGAAATGAAGAAAAGAG+TGG 0.559097 3_4:-51402523 Msa0505770:CDS
CGGTGAGAAGTTTCATGAGA+GGG 0.559454 3_4:-51401951 Msa0505770:CDS
AGGAAGTTCTATATTGTAGC+CGG 0.563265 3_4:+51399903 None:intergenic
GGAATATTATCTAATGGCAT+AGG 0.565864 3_4:+51399883 None:intergenic
AAGGGTGGACTTTAGAGGAA+GGG 0.568945 3_4:-51402167 Msa0505770:CDS
GCGGTGAGAAGTTTCATGAG+AGG 0.574177 3_4:-51401952 Msa0505770:CDS
ATTATAATTCACAGCTGTTG+GGG 0.574784 3_4:-51399954 Msa0505770:intron
GGTATATGCTAATGAGGAAG+GGG 0.575587 3_4:-51401888 Msa0505770:CDS
AACTGATTGACTTAATGGAA+AGG 0.575727 3_4:-51398367 Msa0505770:intron
GAAGGTGAGAGACGAGACTG+TGG 0.576332 3_4:-51401792 Msa0505770:CDS
ATAAGGAAAATGGGTTTAAG+GGG 0.577313 3_4:-51402201 Msa0505770:CDS
ATATGTACCATCAACAGCAA+TGG 0.582483 3_4:+51401484 None:intergenic
CAACCATTCTATTTGACCAA+GGG 0.582629 3_4:+51396193 None:intergenic
ATAGAGGAAATAGGTATAAG+GGG 0.584139 3_4:-51402456 Msa0505770:CDS
GGGTATATGCTAATGAGGAA+GGG 0.586120 3_4:-51401889 Msa0505770:CDS
CACCGGCCAACCAATTCCAA+TGG 0.589363 3_4:-51396117 Msa0505770:three_prime_UTR
ATAGAGAAAATGGGTATAAG+GGG 0.591187 3_4:-51402354 Msa0505770:CDS
GCAATCTCCGGAAGATTAGG+AGG 0.592767 3_4:+51399656 None:intergenic
TAAGGGGAAGATGAAGAAAA+GGG 0.595901 3_4:-51402338 Msa0505770:CDS
AAATGTAAACTTTAAAGGAA+CGG 0.600262 3_4:-51401993 Msa0505770:CDS
CTAAATAGTTTATACATAGG+TGG 0.601021 3_4:-51395944 Msa0505770:three_prime_UTR
AGAAATGAAGAGTTTAGAGG+AGG 0.602155 3_4:-51402424 Msa0505770:CDS
ATCTCCGGAAGATTAGGAGG+TGG 0.612926 3_4:+51399659 None:intergenic
AAGGGCTAGGCTGTATTGCA+CGG 0.613549 3_4:+51400091 None:intergenic
ATAATTCACAGCTGTTGGGG+AGG 0.614023 3_4:-51399951 Msa0505770:intron
GTACGGACATCAGACAAGCC+TGG 0.614464 3_4:-51399452 Msa0505770:CDS
TGCACTTACTAGACAATGGG+GGG 0.615214 3_4:-51399477 Msa0505770:CDS
GAACCGGATCGGGTGAAGAG+AGG 0.615316 3_4:-51402303 Msa0505770:CDS
CGAAGTGAAAGAAGCTTGGG+AGG 0.617961 3_4:-51399243 Msa0505770:CDS
ATATGCTAATGAGGAAGGGG+TGG 0.619724 3_4:-51401885 Msa0505770:CDS
GGGGAAGATGAAGAAAAGGG+TGG 0.621693 3_4:-51402335 Msa0505770:CDS
ATGCACTTACTAGACAATGG+GGG 0.621959 3_4:-51399478 Msa0505770:CDS
TAAGGGGAAGATGAAGAAAA+GGG 0.623119 3_4:-51402185 Msa0505770:CDS
GGGGAAGATGAAGAAAAGGG+TGG 0.624982 3_4:-51402182 Msa0505770:CDS
GCAACCATTCTATTTGACCA+AGG 0.627815 3_4:+51396192 None:intergenic
ATAGGGAAAATGGGTATAAG+GGG 0.628936 3_4:-51402027 Msa0505770:CDS
AGACAAGCCTGGCCATACAC+AGG 0.636059 3_4:-51399441 Msa0505770:intron
GAGTATGTAGCAACACGAGT+TGG 0.639967 3_4:-51398449 Msa0505770:CDS
AAGCATGAACATCATTACAA+TGG 0.642860 3_4:-51396040 Msa0505770:three_prime_UTR
GGATCGGGTGAAGAGAGGAA+TGG 0.655349 3_4:-51402298 Msa0505770:CDS
ACGTGCCATGCAAATCGAAG+AGG 0.659942 3_4:-51397959 Msa0505770:intron
GGTGAGAAGTTTCATGAGAG+GGG 0.660728 3_4:-51401950 Msa0505770:CDS
TTGAAGCATTATGTCTACTG+AGG 0.660792 3_4:-51402635 None:intergenic
GCATAGGTACCTAACATCAC+CGG 0.666756 3_4:-51396134 Msa0505770:three_prime_UTR
AATGCACTTACTAGACAATG+GGG 0.709925 3_4:-51399479 Msa0505770:CDS
GAATCGGGTGAAGAAAGGAG+CGG 0.750171 3_4:-51401971 Msa0505770:CDS
AACATGTCATTATTCCTACG+TGG 0.751587 3_4:+51396325 None:intergenic
TACACCTGAAGACACCACGT+AGG 0.776373 3_4:-51396339 Msa0505770:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTGCATATTAATAATA+AGG + chr3_4:51397159-51397178 None:intergenic 10.0%
!! AGTTAATTAACATAAATTAA+TGG + chr3_4:51402341-51402360 None:intergenic 10.0%
!! AAGAAAAATGTAAACTTTAA+AGG - chr3_4:51396571-51396590 Msa0505770:intron 15.0%
!!! TTGAAAAATTTAGATTCTTT+TGG - chr3_4:51396646-51396665 Msa0505770:intron 15.0%
!!! TGAAAAATTTAGATTCTTTT+GGG - chr3_4:51396647-51396666 Msa0505770:intron 15.0%
!! TTTAATTCCAAATAATTCAA+TGG - chr3_4:51397255-51397274 Msa0505770:intron 15.0%
!! AATCTTAATGTATATTAAAC+TGG - chr3_4:51397734-51397753 Msa0505770:intron 15.0%
!! ATCTTAATGTATATTAAACT+GGG - chr3_4:51397735-51397754 Msa0505770:intron 15.0%
!! ACAAAAAATAGAAATGTTAA+CGG + chr3_4:51398274-51398293 None:intergenic 15.0%
!! AAAACAATATATAGTTTCTA+TGG + chr3_4:51399731-51399750 None:intergenic 15.0%
!! AATGTAAATGAATATAAAAC+CGG + chr3_4:51399974-51399993 None:intergenic 15.0%
!!! AATATAATAAGTTGATAACA+AGG + chr3_4:51400045-51400064 None:intergenic 15.0%
!!! TTCTATTTTATTTTTTCCTT+CGG - chr3_4:51400450-51400469 Msa0505770:intron 15.0%
!! TGATCACTAAATTTATTTAA+TGG - chr3_4:51400504-51400523 Msa0505770:intron 15.0%
!! TATATGAAAACAGTATTAAA+TGG + chr3_4:51401522-51401541 None:intergenic 15.0%
!! ATAGTAATAAATTAAACCAT+TGG + chr3_4:51402471-51402490 None:intergenic 15.0%
!!! AAATGTAAACTTTAAAGGAA+CGG - chr3_4:51396576-51396595 Msa0505770:intron 20.0%
!! CGAAGTATAAAACAAAAATT+TGG + chr3_4:51397417-51397436 None:intergenic 20.0%
!! ATGAATTTGGTTAAAAGATA+TGG - chr3_4:51397461-51397480 Msa0505770:intron 20.0%
!!! ATTTGTTTTCTTTCTGAATA+AGG - chr3_4:51397831-51397850 Msa0505770:intron 20.0%
!! AAATCAGATGTTAAACATTT+GGG + chr3_4:51398155-51398174 None:intergenic 20.0%
!! AACTTTGATAAAAGAATTCA+CGG - chr3_4:51398200-51398219 Msa0505770:intron 20.0%
!!! AATTACATTTTTTTCCACAA+AGG + chr3_4:51398513-51398532 None:intergenic 20.0%
!! TTCTTAAATGTTGAAACATT+TGG - chr3_4:51399160-51399179 Msa0505770:intron 20.0%
!!! ACTATATATTGTTTTGTTGT+CGG - chr3_4:51399736-51399755 Msa0505770:intron 20.0%
!! TATTCTTGTTGACATATTTA+AGG - chr3_4:51400003-51400022 Msa0505770:intron 20.0%
!!! AAATGACTAATTTTAGGTAA+AGG - chr3_4:51400098-51400117 Msa0505770:CDS 20.0%
!!! TTTTAAAAACTAAATCGAAC+TGG + chr3_4:51400417-51400436 None:intergenic 20.0%
!! GAAGGAAAAAATAAAATAGA+AGG + chr3_4:51400451-51400470 None:intergenic 20.0%
!! AAAAAGAACGTTAATTTCTA+GGG + chr3_4:51400665-51400684 None:intergenic 20.0%
!! AAAAAAGAACGTTAATTTCT+AGG + chr3_4:51400666-51400685 None:intergenic 20.0%
!!! TAGAAATTAACGTTCTTTTT+TGG - chr3_4:51400665-51400684 Msa0505770:intron 20.0%
!!! GGTTGTAATATTTGTTTTAT+TGG - chr3_4:51400805-51400824 Msa0505770:intron 20.0%
!! GTCAAATAAAGGATATAATA+AGG - chr3_4:51400916-51400935 Msa0505770:intron 20.0%
!!! TAACTTTTCTTCTTAACTAT+TGG - chr3_4:51401161-51401180 Msa0505770:intron 20.0%
!! AAATGGTTAAATAAGGATTT+GGG + chr3_4:51401505-51401524 None:intergenic 20.0%
!! TAAATGGTTAAATAAGGATT+TGG + chr3_4:51401506-51401525 None:intergenic 20.0%
!! CAGTATTAAATGGTTAAATA+AGG + chr3_4:51401512-51401531 None:intergenic 20.0%
!! ATAAATATTGTGATTGATGA+AGG + chr3_4:51402097-51402116 None:intergenic 20.0%
!! AGTATTAATAACAGCAAAAT+TGG + chr3_4:51402175-51402194 None:intergenic 20.0%
!!! TTTTGATATCCAATTTTATG+TGG - chr3_4:51402272-51402291 Msa0505770:CDS 20.0%
!! ACATAAATTAATGGCTAAAA+AGG + chr3_4:51402332-51402351 None:intergenic 20.0%
!! ATAAATTAAACCATTGGAAT+TGG + chr3_4:51402465-51402484 None:intergenic 20.0%
! ATTAGAAAAAAGCCTAAAGT+TGG - chr3_4:51395974-51395993 Msa0505770:three_prime_UTR 25.0%
!! GAAATTTTTACACCAACTTT+AGG + chr3_4:51395989-51396008 None:intergenic 25.0%
!!! AAGTTGGTGTAAAAATTTCT+AGG - chr3_4:51395990-51396009 Msa0505770:three_prime_UTR 25.0%
! ATGATTATGATAGAGGAAAT+AGG - chr3_4:51396104-51396123 Msa0505770:three_prime_UTR 25.0%
!!! TGATGAGAATCATTTTAACA+AGG - chr3_4:51396507-51396526 Msa0505770:intron 25.0%
!! AAAATTTAGATTCTTTTGGG+AGG - chr3_4:51396650-51396669 Msa0505770:intron 25.0%
!! AGAAACCTTTGTTTAAGAAA+AGG - chr3_4:51396749-51396768 Msa0505770:intron 25.0%
!! GAAACCTTTGTTTAAGAAAA+GGG - chr3_4:51396750-51396769 Msa0505770:intron 25.0%
!!! TTGATTTGAAAGCTTCTTTT+TGG + chr3_4:51396863-51396882 None:intergenic 25.0%
!! TTTTTCATGTCAGATTTTGA+AGG + chr3_4:51396955-51396974 None:intergenic 25.0%
!! ACCCTTTTCTTTTTCTTAAA+GGG + chr3_4:51397018-51397037 None:intergenic 25.0%
!! CAAATATTTTCCTTTCAAAC+TGG - chr3_4:51397172-51397191 Msa0505770:intron 25.0%
!! GTTTTACCTTTTATTGTAGA+TGG - chr3_4:51397218-51397237 Msa0505770:intron 25.0%
! CAATAACCATCTACAATAAA+AGG + chr3_4:51397227-51397246 None:intergenic 25.0%
! GTCTCGTTTGAAAAAATATA+AGG - chr3_4:51397708-51397727 Msa0505770:CDS 25.0%
! CAAATCAGATGTTAAACATT+TGG + chr3_4:51398156-51398175 None:intergenic 25.0%
! TACTTCCTGAAATTAACTTA+CGG + chr3_4:51398394-51398413 None:intergenic 25.0%
! AGTAAATCAAAATACCTTCA+AGG + chr3_4:51398586-51398605 None:intergenic 25.0%
! TAATTATAATTCACAGCTGT+TGG - chr3_4:51398613-51398632 Msa0505770:intron 25.0%
! AATTATAATTCACAGCTGTT+GGG - chr3_4:51398614-51398633 Msa0505770:intron 25.0%
!!! GTCGTTTTGAATGTAATAAA+CGG + chr3_4:51398760-51398779 None:intergenic 25.0%
!!! TACTGTTGTATTTTTTGTTC+CGG - chr3_4:51398820-51398839 Msa0505770:intron 25.0%
! ACAATAAACTTCTTCAACTT+GGG - chr3_4:51399249-51399268 Msa0505770:CDS 25.0%
! TATGGATCGATTAACATAAA+GGG + chr3_4:51399672-51399691 None:intergenic 25.0%
!!! CTATATATTGTTTTGTTGTC+GGG - chr3_4:51399737-51399756 Msa0505770:intron 25.0%
!!! TATATATTGTTTTGTTGTCG+GGG - chr3_4:51399738-51399757 Msa0505770:intron 25.0%
!!! CTCTTCTATATGGTTTTATA+TGG - chr3_4:51399824-51399843 Msa0505770:intron 25.0%
! TTGTTGACATATTTAAGGAT+TGG - chr3_4:51400008-51400027 Msa0505770:intron 25.0%
!! TTGGGAAAATGACTAATTTT+AGG - chr3_4:51400092-51400111 Msa0505770:CDS 25.0%
!!! CCTTTTGATTGATACAAAAT+GGG - chr3_4:51400158-51400177 Msa0505770:CDS 25.0%
!!! CTTTTGATTGATACAAAATG+GGG - chr3_4:51400159-51400178 Msa0505770:CDS 25.0%
!! TATTGAACTGATTGACTTAA+TGG - chr3_4:51400197-51400216 Msa0505770:intron 25.0%
!! TTAATTTCTAGGGGAAAAAA+AGG + chr3_4:51400655-51400674 None:intergenic 25.0%
!! AAAAGAACGTTAATTTCTAG+GGG + chr3_4:51400664-51400683 None:intergenic 25.0%
! AAAAGAATATATCTTACCAG+AGG + chr3_4:51400753-51400772 None:intergenic 25.0%
!! TCTGGTAAGATATATTCTTT+TGG - chr3_4:51400752-51400771 Msa0505770:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr3_4:51401212-51401231 None:intergenic 25.0%
! ATAAGTGCATATGCTAATAA+GGG + chr3_4:51401240-51401259 None:intergenic 25.0%
! TATTGACATAAACAATTGTG+AGG + chr3_4:51401433-51401452 None:intergenic 25.0%
! TTCCTCATTATGTTAATCTA+TGG - chr3_4:51401992-51402011 Msa0505770:CDS 25.0%
! TACCATAGATTAACATAATG+AGG + chr3_4:51401997-51402016 None:intergenic 25.0%
! ATTATGTTAATCTATGGTAG+TGG - chr3_4:51401998-51402017 Msa0505770:CDS 25.0%
!!! TTATGACTTTTTTTGTCACT+AGG - chr3_4:51402113-51402132 Msa0505770:CDS 25.0%
! GGCTAAAAAGGTAATTAAAA+TGG + chr3_4:51402320-51402339 None:intergenic 25.0%
!!! TTCAACATTTTTTATTCCCT+TGG - chr3_4:51402360-51402379 Msa0505770:CDS 25.0%
!! TTTTATATTTTCATGGGAAG+TGG - chr3_4:51402495-51402514 Msa0505770:CDS 25.0%
! GGACTAAATAGTTTATACAT+AGG - chr3_4:51402622-51402641 Msa0505770:CDS 25.0%
GTAAAAGATGAAGAGTTTAG+AGG - chr3_4:51396028-51396047 Msa0505770:three_prime_UTR 30.0%
!! AGAAGAAAGTTTTATGAGAG+AGG - chr3_4:51396076-51396095 Msa0505770:three_prime_UTR 30.0%
GGTGAAAATGATTATGATAG+AGG - chr3_4:51396097-51396116 Msa0505770:three_prime_UTR 30.0%
TGATAGAGGAAATAGGTATA+AGG - chr3_4:51396111-51396130 Msa0505770:three_prime_UTR 30.0%
GATAGAGGAAATAGGTATAA+GGG - chr3_4:51396112-51396131 Msa0505770:three_prime_UTR 30.0%
ATAGAGGAAATAGGTATAAG+GGG - chr3_4:51396113-51396132 Msa0505770:three_prime_UTR 30.0%
AAGAGAAATGAAGAGTTTAG+AGG - chr3_4:51396142-51396161 Msa0505770:three_prime_UTR 30.0%
!! AGAAGAAAGTTTTATGAGAG+AGG - chr3_4:51396076-51396095 Msa0505770:three_prime_UTR 30.0%
TGATAGAGAAAATGGGTATA+AGG - chr3_4:51396213-51396232 Msa0505770:three_prime_UTR 30.0%
GATAGAGAAAATGGGTATAA+GGG - chr3_4:51396214-51396233 Msa0505770:three_prime_UTR 30.0%
ATAGAGAAAATGGGTATAAG+GGG - chr3_4:51396215-51396234 Msa0505770:three_prime_UTR 30.0%
!!! GAATGGTTTTAATGAGGATA+CGG - chr3_4:51396339-51396358 Msa0505770:three_prime_UTR 30.0%
! ACGGTTTTTGATAAGGAAAA+TGG - chr3_4:51396358-51396377 Msa0505770:three_prime_UTR 30.0%
! CGGTTTTTGATAAGGAAAAT+GGG - chr3_4:51396359-51396378 Msa0505770:three_prime_UTR 30.0%
! TGATAAGGAAAATGGGTTTA+AGG - chr3_4:51396366-51396385 Msa0505770:three_prime_UTR 30.0%
! GATAAGGAAAATGGGTTTAA+GGG - chr3_4:51396367-51396386 Msa0505770:three_prime_UTR 30.0%
! ATAAGGAAAATGGGTTTAAG+GGG - chr3_4:51396368-51396387 Msa0505770:three_prime_UTR 30.0%
!! GAATCATTTTAACAAGGATG+TGG - chr3_4:51396513-51396532 Msa0505770:intron 30.0%
! TGGTTTTTGATAGGGAAAAT+GGG - chr3_4:51396533-51396552 Msa0505770:intron 30.0%
! AAACTTTAAAGGAACGGAAT+CGG - chr3_4:51396582-51396601 Msa0505770:intron 30.0%
! TTCTCCCTTTTCTTAAACAA+AGG + chr3_4:51396757-51396776 None:intergenic 30.0%
GCTTTCAAATCAAAGTTTGA+AGG - chr3_4:51396870-51396889 Msa0505770:intron 30.0%
AAGGACAAGAAAGAAATTGA+TGG - chr3_4:51396889-51396908 Msa0505770:intron 30.0%
AAATCTGACATGAAAAAACC+AGG - chr3_4:51396958-51396977 Msa0505770:intron 30.0%
AATCTGACATGAAAAAACCA+GGG - chr3_4:51396959-51396978 Msa0505770:intron 30.0%
! CCCTTTTCTTTTTCTTAAAG+GGG + chr3_4:51397017-51397036 None:intergenic 30.0%
! CCCCTTTAAGAAAAAGAAAA+GGG - chr3_4:51397014-51397033 Msa0505770:intron 30.0%
! CACCCTTTTCTTTTTCTTAA+AGG + chr3_4:51397019-51397038 None:intergenic 30.0%
! CTCTTGTTTGAGATATCATA+TGG + chr3_4:51397054-51397073 None:intergenic 30.0%
! GACAAATTTTCCAGTTTGAA+AGG + chr3_4:51397185-51397204 None:intergenic 30.0%
AGGTAAAACAGTATGATTAC+AGG + chr3_4:51397207-51397226 None:intergenic 30.0%
TCCAAATAATTCAATGGTGT+TGG - chr3_4:51397261-51397280 Msa0505770:intron 30.0%
ACCAACACCATTGAATTATT+TGG + chr3_4:51397265-51397284 None:intergenic 30.0%
GGTTAAAAGATATGGTAGAT+TGG - chr3_4:51397469-51397488 Msa0505770:intron 30.0%
TGGTAGTATGAACAAATTAC+AGG - chr3_4:51397489-51397508 Msa0505770:intron 30.0%
AACAAAATAACCTGCGAAAT+AGG + chr3_4:51397533-51397552 None:intergenic 30.0%
GACAAAACTAAAGGTTAAAC+TGG + chr3_4:51397648-51397667 None:intergenic 30.0%
TGATGTACAGACAAAACTAA+AGG + chr3_4:51397657-51397676 None:intergenic 30.0%
!!! TAGTTTTGTCTGTACATCAT+AGG - chr3_4:51397658-51397677 Msa0505770:exon 30.0%
!!! TACACTAAGGTTTTAAGGTT+TGG + chr3_4:51397780-51397799 None:intergenic 30.0%
AAACCTTAAAACCTTAGTGT+AGG - chr3_4:51397779-51397798 Msa0505770:intron 30.0%
AACCTTAAAACCTTAGTGTA+GGG - chr3_4:51397780-51397799 Msa0505770:intron 30.0%
ACAAATCATATTCGTTTCAC+TGG + chr3_4:51397817-51397836 None:intergenic 30.0%
AAACTGTCATGTAGATCATA+TGG + chr3_4:51397994-51398013 None:intergenic 30.0%
GTAAGTGCTTATACTATAAG+CGG - chr3_4:51398102-51398121 Msa0505770:intron 30.0%
ATTAAGCTGTTTATCCAAAC+AGG - chr3_4:51398128-51398147 Msa0505770:intron 30.0%
TTAAGCTGTTTATCCAAACA+GGG - chr3_4:51398129-51398148 Msa0505770:intron 30.0%
!!! CTATTTTTTGTTTCACACGT+TGG - chr3_4:51398283-51398302 Msa0505770:intron 30.0%
AACTTACGGAATCAAATTCA+AGG + chr3_4:51398380-51398399 None:intergenic 30.0%
TGATTCCGTAAGTTAATTTC+AGG - chr3_4:51398386-51398405 Msa0505770:CDS 30.0%
TTAATGCATCATTTCCTTGA+AGG - chr3_4:51398569-51398588 Msa0505770:intron 30.0%
ATTATAATTCACAGCTGTTG+GGG - chr3_4:51398615-51398634 Msa0505770:intron 30.0%
GCGCATGATAGAAATAAAAA+GGG - chr3_4:51398643-51398662 Msa0505770:intron 30.0%
ATGATAGAAATAAAAAGGGC+CGG - chr3_4:51398647-51398666 Msa0505770:intron 30.0%
GGAATATTATCTAATGGCAT+AGG + chr3_4:51398689-51398708 None:intergenic 30.0%
GAGAAGGGAATATTATCTAA+TGG + chr3_4:51398695-51398714 None:intergenic 30.0%
TTAATGCACTTACTAGACAA+TGG - chr3_4:51399088-51399107 Msa0505770:intron 30.0%
TAATGCACTTACTAGACAAT+GGG - chr3_4:51399089-51399108 Msa0505770:intron 30.0%
GACAATAAACTTCTTCAACT+TGG - chr3_4:51399248-51399267 Msa0505770:CDS 30.0%
TGATACAATGCATACTTACA+AGG + chr3_4:51399353-51399372 None:intergenic 30.0%
GCATTGTATCAAATTCTCAA+TGG - chr3_4:51399362-51399381 Msa0505770:intron 30.0%
CAAAAGACATTGAATTCTCA+GGG + chr3_4:51399470-51399489 None:intergenic 30.0%
! GACGTTTTTACATGTAAAAC+TGG + chr3_4:51399507-51399526 None:intergenic 30.0%
ATCTAATTGTCTACACAAAG+AGG - chr3_4:51399568-51399587 Msa0505770:intron 30.0%
GTATGGATCGATTAACATAA+AGG + chr3_4:51399673-51399692 None:intergenic 30.0%
AATGATCAGGAGATAAGATT+TGG - chr3_4:51399693-51399712 Msa0505770:CDS 30.0%
!! ATATATTGTTTTGTTGTCGG+GGG - chr3_4:51399739-51399758 Msa0505770:intron 30.0%
TATCATGTGTCTCTTCTATA+TGG - chr3_4:51399814-51399833 Msa0505770:intron 30.0%
!!! ATTGCGTTTTTTGTTTACTG+CGG + chr3_4:51399861-51399880 None:intergenic 30.0%
! TTATGCGCAGTTTTCAATAT+CGG - chr3_4:51399880-51399899 Msa0505770:CDS 30.0%
AATGAATATAAAACCGGACT+TGG + chr3_4:51399968-51399987 None:intergenic 30.0%
TATGTCAACAAGAATACATG+AGG + chr3_4:51399999-51400018 None:intergenic 30.0%
!! GCCTTTTGATTGATACAAAA+TGG - chr3_4:51400157-51400176 Msa0505770:CDS 30.0%
! CCCATTTTGTATCAATCAAA+AGG + chr3_4:51400161-51400180 None:intergenic 30.0%
TCAATCAGTTCAATATCTCT+TGG + chr3_4:51400192-51400211 None:intergenic 30.0%
! AACTGATTGACTTAATGGAA+AGG - chr3_4:51400202-51400221 Msa0505770:intron 30.0%
GTTTATAAACATAGGTTGCA+GGG + chr3_4:51400251-51400270 None:intergenic 30.0%
TGTTTATAAACATAGGTTGC+AGG + chr3_4:51400252-51400271 None:intergenic 30.0%
!! CTGGTTCTGTTTATAAACAT+AGG + chr3_4:51400259-51400278 None:intergenic 30.0%
TGCATTAAACCGTTTGAATT+GGG - chr3_4:51400316-51400335 Msa0505770:intron 30.0%
AAAAACTAAATCGAACTGGA+CGG + chr3_4:51400413-51400432 None:intergenic 30.0%
! TTATATATGTAACTTGCCGA+AGG + chr3_4:51400469-51400488 None:intergenic 30.0%
AATAATGTCCAAAAAGTGGA+GGG + chr3_4:51400782-51400801 None:intergenic 30.0%
CAACAATAATGTCCAAAAAG+TGG + chr3_4:51400786-51400805 None:intergenic 30.0%
!! CACTTTTTGGACATTATTGT+TGG - chr3_4:51400784-51400803 Msa0505770:intron 30.0%
! TAGCTCGATTTGTCAAATAA+AGG - chr3_4:51400905-51400924 Msa0505770:intron 30.0%
! TTTTCATGCTCATTGAAACA+TGG - chr3_4:51400966-51400985 Msa0505770:intron 30.0%
GAGCAAATAGTTAACTTAGT+AGG - chr3_4:51401090-51401109 Msa0505770:intron 30.0%
CACAGAAAATAAAACAGCTA+AGG + chr3_4:51401132-51401151 None:intergenic 30.0%
!!! CTTAGCTGTTTTATTTTCTG+TGG - chr3_4:51401130-51401149 Msa0505770:intron 30.0%
GATAAGTGCATATGCTAATA+AGG + chr3_4:51401241-51401260 None:intergenic 30.0%
CACTTATCATATAAGTGCTT+AGG - chr3_4:51401253-51401272 Msa0505770:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr3_4:51401369-51401388 Msa0505770:intron 30.0%
ATAAGCTGAAAACAGCTTAT+GGG - chr3_4:51401370-51401389 Msa0505770:intron 30.0%
GTTAAATAAGGATTTGGGTA+AGG + chr3_4:51401500-51401519 None:intergenic 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr3_4:51401369-51401388 Msa0505770:intron 30.0%
ATAAGCTGAAAACAGCTTAT+GGG - chr3_4:51401370-51401389 Msa0505770:intron 30.0%
TTGGCTGAGTTAAGAAAAAT+GGG + chr3_4:51401830-51401849 None:intergenic 30.0%
TGTACTCAACTCAAGTAAAT+GGG - chr3_4:51402028-51402047 Msa0505770:CDS 30.0%
ATGTTGAACTACTCTCAAAA+GGG + chr3_4:51402058-51402077 None:intergenic 30.0%
TGCTGTTATTAATACTTTGC+AGG - chr3_4:51402179-51402198 Msa0505770:CDS 30.0%
ATTAAACCATTGGAATTGGT+TGG + chr3_4:51402461-51402480 None:intergenic 30.0%
AAGCATGAACATCATTACAA+TGG - chr3_4:51402529-51402548 Msa0505770:CDS 30.0%
! TCTTGTCAATAAGTTGACAT+TGG - chr3_4:51402601-51402620 Msa0505770:CDS 30.0%
! TGTCTACTGAGGAAGTTTTA+AGG - chr3_4:51395945-51395964 Msa0505770:three_prime_UTR 35.0%
AGAGGAAATGAAGAAAAGAG+TGG - chr3_4:51396046-51396065 Msa0505770:three_prime_UTR 35.0%
AGAAATGAAGAGTTTAGAGG+AGG - chr3_4:51396145-51396164 Msa0505770:three_prime_UTR 35.0%
AGAGAGGTGATAGAGAAAAT+GGG - chr3_4:51396206-51396225 Msa0505770:three_prime_UTR 35.0%
ATAAGGGGAAGATGAAGAAA+AGG - chr3_4:51396230-51396249 Msa0505770:three_prime_UTR 35.0%
TAAGGGGAAGATGAAGAAAA+GGG - chr3_4:51396231-51396250 Msa0505770:three_prime_UTR 35.0%
!! GTGAGAAGTTTTATGAGAGA+GGG - chr3_4:51396293-51396312 Msa0505770:three_prime_UTR 35.0%
AGAAGTAGAAAGGATGAGAA+TGG - chr3_4:51396322-51396341 Msa0505770:three_prime_UTR 35.0%
!!! GGATGAGAATGGTTTTAATG+AGG - chr3_4:51396333-51396352 Msa0505770:three_prime_UTR 35.0%
! TGAGGATACGGTTTTTGATA+AGG - chr3_4:51396351-51396370 Msa0505770:three_prime_UTR 35.0%
TTAAGGGGAAGATGAAGAAA+AGG - chr3_4:51396383-51396402 Msa0505770:intron 35.0%
TAAGGGGAAGATGAAGAAAA+GGG - chr3_4:51396231-51396250 Msa0505770:three_prime_UTR 35.0%
! ACAAGGATGTGGTTTTTGAT+AGG - chr3_4:51396524-51396543 Msa0505770:intron 35.0%
! CAAGGATGTGGTTTTTGATA+GGG - chr3_4:51396525-51396544 Msa0505770:intron 35.0%
! GTGGTTTTTGATAGGGAAAA+TGG - chr3_4:51396532-51396551 Msa0505770:intron 35.0%
TGATAGGGAAAATGGGTATA+AGG - chr3_4:51396540-51396559 Msa0505770:intron 35.0%
GATAGGGAAAATGGGTATAA+GGG - chr3_4:51396541-51396560 Msa0505770:intron 35.0%
ATAGGGAAAATGGGTATAAG+GGG - chr3_4:51396542-51396561 Msa0505770:intron 35.0%
! AACTTTAAAGGAACGGAATC+GGG - chr3_4:51396583-51396602 Msa0505770:intron 35.0%
TGGATGAAAGCGAAAAATCA+TGG - chr3_4:51396704-51396723 Msa0505770:intron 35.0%
GTTTAAGAAAAGGGAGAAGA+AGG - chr3_4:51396759-51396778 Msa0505770:intron 35.0%
! GCCCCTTTAAGAAAAAGAAA+AGG - chr3_4:51397013-51397032 Msa0505770:intron 35.0%
AGAAAAAGAAAAGGGTGATG+AGG - chr3_4:51397022-51397041 Msa0505770:intron 35.0%
ATATGTACCATCAACAGCAA+TGG + chr3_4:51397088-51397107 None:intergenic 35.0%
TACTTCGAATACTACTTGCT+AGG - chr3_4:51397430-51397449 Msa0505770:intron 35.0%
CTAGGCACAATCTATGAATT+TGG - chr3_4:51397448-51397467 Msa0505770:intron 35.0%
AACTTAGTATCCTATTTCGC+AGG - chr3_4:51397520-51397539 Msa0505770:intron 35.0%
! AGTATAGGGTTTAGGGTTTA+GGG + chr3_4:51397571-51397590 None:intergenic 35.0%
AAGGAAAAAGGTGGAGTATA+GGG + chr3_4:51397585-51397604 None:intergenic 35.0%
AAAGGAAAAAGGTGGAGTAT+AGG + chr3_4:51397586-51397605 None:intergenic 35.0%
CTGGTTCCAGTGATATTATA+CGG + chr3_4:51397629-51397648 None:intergenic 35.0%
! ATCCCTACACTAAGGTTTTA+AGG + chr3_4:51397785-51397804 None:intergenic 35.0%
AACCTTAGTGTAGGGATTTA+TGG - chr3_4:51397788-51397807 Msa0505770:intron 35.0%
AACCATAAATCCCTACACTA+AGG + chr3_4:51397793-51397812 None:intergenic 35.0%
!!! GTTTTGAAGTTTGAGACCAA+GGG - chr3_4:51397853-51397872 Msa0505770:intron 35.0%
! GACCAAGGGTATATTTGAAT+TGG - chr3_4:51397867-51397886 Msa0505770:intron 35.0%
AGCCAATTCAAATATACCCT+TGG + chr3_4:51397872-51397891 None:intergenic 35.0%
GATAAAAGAATTCACGGAAG+AGG - chr3_4:51398206-51398225 Msa0505770:intron 35.0%
AAGAGGATCAATTCACCTTT+GGG - chr3_4:51398223-51398242 Msa0505770:intron 35.0%
AGAAGAGAAGGAGAAGAAAA+AGG - chr3_4:51398415-51398434 Msa0505770:CDS 35.0%
!! CCACAAAGGTAAGTATTGAA+GGG + chr3_4:51398499-51398518 None:intergenic 35.0%
!! TCCACAAAGGTAAGTATTGA+AGG + chr3_4:51398500-51398519 None:intergenic 35.0%
GGCGCATGATAGAAATAAAA+AGG - chr3_4:51398642-51398661 Msa0505770:intron 35.0%
AGGAAGTTCTATATTGTAGC+CGG + chr3_4:51398669-51398688 None:intergenic 35.0%
TTCTTCAATGTTCTCTCTGT+CGG + chr3_4:51398726-51398745 None:intergenic 35.0%
! ACAGGTTTTCAGAAACAGAT+TGG - chr3_4:51398852-51398871 Msa0505770:intron 35.0%
TGTAGTTGCTTAGCAAAACA+CGG - chr3_4:51398993-51399012 Msa0505770:intron 35.0%
!!! GTTTTTTGCTGATTGTGTTC+TGG - chr3_4:51399028-51399047 Msa0505770:intron 35.0%
CTAACAGGAAAGTCAAATGT+TGG - chr3_4:51399051-51399070 Msa0505770:intron 35.0%
AATGCACTTACTAGACAATG+GGG - chr3_4:51399090-51399109 Msa0505770:intron 35.0%
GCAGATAATTCACGATTTGT+TGG + chr3_4:51399227-51399246 None:intergenic 35.0%
!! TTAGTTGATTTGCCAGGATA+TGG - chr3_4:51399285-51399304 Msa0505770:CDS 35.0%
ATCAAATTCTCAATGGTCAC+TGG - chr3_4:51399369-51399388 Msa0505770:intron 35.0%
! GTCTGTTTGTTAACATGTCA+AGG - chr3_4:51399419-51399438 Msa0505770:intron 35.0%
CCAAAAGACATTGAATTCTC+AGG + chr3_4:51399471-51399490 None:intergenic 35.0%
! CCTGAGAATTCAATGTCTTT+TGG - chr3_4:51399468-51399487 Msa0505770:CDS 35.0%
AATCGATCCATACAATGATC+AGG - chr3_4:51399680-51399699 Msa0505770:CDS 35.0%
CTTATCTCCTGATCATTGTA+TGG + chr3_4:51399690-51399709 None:intergenic 35.0%
!! GCCATTAATATGAGTACTGA+CGG - chr3_4:51399902-51399921 Msa0505770:CDS 35.0%
ACCGTCAGTACTCATATTAA+TGG + chr3_4:51399906-51399925 None:intergenic 35.0%
TATAAAACCGGACTTGGATT+CGG + chr3_4:51399962-51399981 None:intergenic 35.0%
!!! AGTGCTGATTAGTTGTGTTT+TGG - chr3_4:51400073-51400092 Msa0505770:CDS 35.0%
!!! GTGCTGATTAGTTGTGTTTT+GGG - chr3_4:51400074-51400093 Msa0505770:CDS 35.0%
ATGGAAAGGTAAACCATACA+AGG - chr3_4:51400216-51400235 Msa0505770:intron 35.0%
TGGAAAGGTAAACCATACAA+GGG - chr3_4:51400217-51400236 Msa0505770:intron 35.0%
CTGCATTAAACCGTTTGAAT+TGG - chr3_4:51400315-51400334 Msa0505770:intron 35.0%
!! CAGTTTTGTCCCAATTCAAA+CGG + chr3_4:51400328-51400347 None:intergenic 35.0%
CTGTCTTGGTTAATACTATC+TGG + chr3_4:51400562-51400581 None:intergenic 35.0%
! GGTTGAATTACAGACTTGTT+CGG + chr3_4:51400732-51400751 None:intergenic 35.0%
CAATAATGTCCAAAAAGTGG+AGG + chr3_4:51400783-51400802 None:intergenic 35.0%
! AAAACCGAAGTACCAAAGAA+AGG - chr3_4:51401027-51401046 Msa0505770:intron 35.0%
! AAACCGAAGTACCAAAGAAA+GGG - chr3_4:51401028-51401047 Msa0505770:intron 35.0%
!! AAAAAAGTGTCCCCTTTCTT+TGG + chr3_4:51401042-51401061 None:intergenic 35.0%
TTCAAGGTTAAGACCTTGTT+TGG - chr3_4:51401196-51401215 Msa0505770:intron 35.0%
! TTTTCATTAGCTATCCTGCA+GGG - chr3_4:51401338-51401357 Msa0505770:intron 35.0%
AAACAATTGTGAGGCTGATT+GGG + chr3_4:51401424-51401443 None:intergenic 35.0%
TAAACAATTGTGAGGCTGAT+TGG + chr3_4:51401425-51401444 None:intergenic 35.0%
TAAGGATTTGGGTAAGGTAT+TGG + chr3_4:51401494-51401513 None:intergenic 35.0%
TTGTCAGAGCTTATAACACA+AGG - chr3_4:51401654-51401673 Msa0505770:CDS 35.0%
TGTCAGAGCTTATAACACAA+GGG - chr3_4:51401655-51401674 Msa0505770:CDS 35.0%
TGGCTGAGTTAAGAAAAATG+GGG + chr3_4:51401829-51401848 None:intergenic 35.0%
GTTGGCTGAGTTAAGAAAAA+TGG + chr3_4:51401831-51401850 None:intergenic 35.0%
! TTTTCTTAACTCAGCCAACA+TGG - chr3_4:51401832-51401851 Msa0505770:CDS 35.0%
CTCAGAATGAAAAAGCTGAA+GGG + chr3_4:51401882-51401901 None:intergenic 35.0%
GTGTACTCAACTCAAGTAAA+TGG - chr3_4:51402027-51402046 Msa0505770:CDS 35.0%
GATGTTGAACTACTCTCAAA+AGG + chr3_4:51402059-51402078 None:intergenic 35.0%
TCTACATCAGCAAAAACACA+TGG + chr3_4:51402205-51402224 None:intergenic 35.0%
AACATGTCATTATTCCTACG+TGG + chr3_4:51402247-51402266 None:intergenic 35.0%
ATTCCCTTGGTCAAATAGAA+TGG - chr3_4:51402373-51402392 Msa0505770:CDS 35.0%
CAACCATTCTATTTGACCAA+GGG + chr3_4:51402379-51402398 None:intergenic 35.0%
!! CAAGCATTTTGAAAAGGAGT+GGG + chr3_4:51402413-51402432 None:intergenic 35.0%
!! ATGCTGCAAGCATTTTGAAA+AGG + chr3_4:51402419-51402438 None:intergenic 35.0%
TTTCAAAATGCTTGCAGCAT+AGG - chr3_4:51402419-51402438 Msa0505770:CDS 35.0%
! TTCATGGGAAGTGGATTTAT+AGG - chr3_4:51402504-51402523 Msa0505770:CDS 35.0%
!! ATCATTACAATGGTGCTATC+TGG - chr3_4:51402539-51402558 Msa0505770:CDS 35.0%
AGAGGAGGTGAAAAAAAGAG+TGG - chr3_4:51396160-51396179 Msa0505770:three_prime_UTR 40.0%
GAGAGAGGTGATAGAGAAAA+TGG - chr3_4:51396205-51396224 Msa0505770:three_prime_UTR 40.0%
! ATGAAGAAAAGGGTGGACTT+TGG - chr3_4:51396241-51396260 Msa0505770:three_prime_UTR 40.0%
!! GGTGAGAAGTTTTATGAGAG+AGG - chr3_4:51396292-51396311 Msa0505770:three_prime_UTR 40.0%
AGGGAAGTTGAGAAGTAGAA+AGG - chr3_4:51396312-51396331 Msa0505770:three_prime_UTR 40.0%
! AAGAAAAGGGTGGACTTTAG+AGG - chr3_4:51396397-51396416 Msa0505770:intron 40.0%
! CAGAGAAGTTTTACGAGAGA+GGG - chr3_4:51396446-51396465 Msa0505770:intron 40.0%
AGGGAAGTTGAGAACTTCTA+AGG - chr3_4:51396465-51396484 Msa0505770:intron 40.0%
!! ATTCTTTTGGGAGGAAGAAG+AGG - chr3_4:51396659-51396678 Msa0505770:intron 40.0%
!! TTCTTTTGGGAGGAAGAAGA+GGG - chr3_4:51396660-51396679 Msa0505770:intron 40.0%
! GAAGAGGGTATATGCTAATG+AGG - chr3_4:51396675-51396694 Msa0505770:intron 40.0%
AGGGTATATGCTAATGAGGA+AGG - chr3_4:51396679-51396698 Msa0505770:intron 40.0%
GGGTATATGCTAATGAGGAA+GGG - chr3_4:51396680-51396699 Msa0505770:intron 40.0%
GGTATATGCTAATGAGGAAG+GGG - chr3_4:51396681-51396700 Msa0505770:intron 40.0%
CCAGATTGTACGTTCATCAT+CGG + chr3_4:51396812-51396831 None:intergenic 40.0%
CGATGATGAACGTACAATCT+GGG - chr3_4:51396810-51396829 Msa0505770:intron 40.0%
! GAACGTACAATCTGGGATTT+CGG - chr3_4:51396817-51396836 Msa0505770:intron 40.0%
GGATTTCGGTAAATTGAAGC+AGG - chr3_4:51396831-51396850 Msa0505770:intron 40.0%
TGACATGAAAAAACCAGGGT+TGG - chr3_4:51396963-51396982 Msa0505770:intron 40.0%
! GATGATTCCATTGCTGTTGA+TGG - chr3_4:51397078-51397097 Msa0505770:intron 40.0%
! CAGCTCTAATACTTAGCTCA+TGG + chr3_4:51397336-51397355 None:intergenic 40.0%
TTAGAGCTGTACTGAGACAA+TGG - chr3_4:51397347-51397366 Msa0505770:intron 40.0%
! GAGTATAGGGTTTAGGGTTT+AGG + chr3_4:51397572-51397591 None:intergenic 40.0%
AAGGTGGAGTATAGGGTTTA+GGG + chr3_4:51397578-51397597 None:intergenic 40.0%
AAAGGTGGAGTATAGGGTTT+AGG + chr3_4:51397579-51397598 None:intergenic 40.0%
CTACTCACTGGAAAGGAAAA+AGG + chr3_4:51397597-51397616 None:intergenic 40.0%
TCCTTTCCAGTGAGTAGAAA+TGG - chr3_4:51397600-51397619 Msa0505770:intron 40.0%
TCCATTTCTACTCACTGGAA+AGG + chr3_4:51397604-51397623 None:intergenic 40.0%
TGGAAGCCGTATAATATCAC+TGG - chr3_4:51397620-51397639 Msa0505770:intron 40.0%
!!! GGTTTTGAAGTTTGAGACCA+AGG - chr3_4:51397852-51397871 Msa0505770:CDS 40.0%
TTAAACATTTGGGCCCTGTT+TGG + chr3_4:51398145-51398164 None:intergenic 40.0%
GAAGAGGATCAATTCACCTT+TGG - chr3_4:51398222-51398241 Msa0505770:intron 40.0%
TTAACGGAACGACAATCATC+AGG + chr3_4:51398258-51398277 None:intergenic 40.0%
! TTCAGGAAGTACAGAAGAGA+AGG - chr3_4:51398403-51398422 Msa0505770:CDS 40.0%
!! AAGGTAAGTATTGAAGGGCT+AGG + chr3_4:51398494-51398513 None:intergenic 40.0%
CCCTTCAATACTTACCTTTG+TGG - chr3_4:51398496-51398515 Msa0505770:intron 40.0%
!! CTGTCGGAACTTTTAGAGAA+GGG + chr3_4:51398710-51398729 None:intergenic 40.0%
!! TCTGTCGGAACTTTTAGAGA+AGG + chr3_4:51398711-51398730 None:intergenic 40.0%
GAAAACCTGTCTCAGATTAC+CGG + chr3_4:51398842-51398861 None:intergenic 40.0%
! CAGATTGGAATTTTTCGCTG+CGG - chr3_4:51398867-51398886 Msa0505770:intron 40.0%
ATTTCCACCTCCTAATCTTC+CGG - chr3_4:51398906-51398925 Msa0505770:intron 40.0%
AATGCAATCTCCGGAAGATT+AGG + chr3_4:51398919-51398938 None:intergenic 40.0%
ATACCAGCAAATGCAATCTC+CGG + chr3_4:51398928-51398947 None:intergenic 40.0%
ATGCACTTACTAGACAATGG+GGG - chr3_4:51399091-51399110 Msa0505770:intron 40.0%
GAACCTAGAATACCTGTGTA+TGG + chr3_4:51399143-51399162 None:intergenic 40.0%
!! CTTAGCTTAGTTGATTTGCC+AGG - chr3_4:51399279-51399298 Msa0505770:CDS 40.0%
AAGACGAAGTGAAAGAAGCT+TGG - chr3_4:51399322-51399341 Msa0505770:CDS 40.0%
AGACGAAGTGAAAGAAGCTT+GGG - chr3_4:51399323-51399342 Msa0505770:CDS 40.0%
! AAGAGGTGATTTTGCAGTTC+TGG - chr3_4:51399585-51399604 Msa0505770:intron 40.0%
AGGGCAAAATTTCCCTTGTA+TGG + chr3_4:51400232-51400251 None:intergenic 40.0%
GGTTTAATGCAGTTGAACCA+TGG + chr3_4:51400307-51400326 None:intergenic 40.0%
! TACCGTTTTCCCAATTGATG+TGG - chr3_4:51400583-51400602 Msa0505770:intron 40.0%
! ATTCACCTCTTCGATTTGCA+TGG + chr3_4:51400618-51400637 None:intergenic 40.0%
!! GGGGAAAAAAAGGTACTGAT+AGG + chr3_4:51400645-51400664 None:intergenic 40.0%
CAAGTCTGTAATTCAACCTC+TGG - chr3_4:51400734-51400753 Msa0505770:intron 40.0%
!! TTGGTTTTCCCTCCACTTTT+TGG - chr3_4:51400771-51400790 Msa0505770:intron 40.0%
ATGATGCCTATTGCAGATGA+TGG - chr3_4:51400828-51400847 Msa0505770:intron 40.0%
! ATGATGGCTAGCTCAAAATC+TGG - chr3_4:51400844-51400863 Msa0505770:intron 40.0%
! AACCGAAGTACCAAAGAAAG+GGG - chr3_4:51401029-51401048 Msa0505770:intron 40.0%
TTGGAGTAACGTTGTCTTCA+AGG - chr3_4:51401180-51401199 Msa0505770:intron 40.0%
! GTTTTCATTAGCTATCCTGC+AGG - chr3_4:51401337-51401356 Msa0505770:intron 40.0%
!! TATTGGCTTAAGGGACTGTA+TGG + chr3_4:51401477-51401496 None:intergenic 40.0%
!! TGGGTAAGGTATTGGCTTAA+GGG + chr3_4:51401486-51401505 None:intergenic 40.0%
!! TTGGGTAAGGTATTGGCTTA+AGG + chr3_4:51401487-51401506 None:intergenic 40.0%
CTTATTTCCATGAACTCTGC+AGG + chr3_4:51401571-51401590 None:intergenic 40.0%
AAAAGTCATGCTTGGAACCA+AGG + chr3_4:51401635-51401654 None:intergenic 40.0%
CTCTGACAAAAAGTCATGCT+TGG + chr3_4:51401643-51401662 None:intergenic 40.0%
GATAGAATGGAACGGAAAAG+CGG + chr3_4:51401780-51401799 None:intergenic 40.0%
TGAGTTAAGAAAAATGGGGG+AGG + chr3_4:51401825-51401844 None:intergenic 40.0%
GGCTGAGTTAAGAAAAATGG+GGG + chr3_4:51401828-51401847 None:intergenic 40.0%
ATGAAAAAGCTGAAGGGAGA+TGG + chr3_4:51401876-51401895 None:intergenic 40.0%
CCTCAGAATGAAAAAGCTGA+AGG + chr3_4:51401883-51401902 None:intergenic 40.0%
!!! CCTTCAGCTTTTTCATTCTG+AGG - chr3_4:51401880-51401899 Msa0505770:CDS 40.0%
AGTGTACGTCACACAAAATG+GGG + chr3_4:51401947-51401966 None:intergenic 40.0%
CAGTGTACGTCACACAAAAT+GGG + chr3_4:51401948-51401967 None:intergenic 40.0%
AGAGACGTGCCACATAAAAT+TGG + chr3_4:51402284-51402303 None:intergenic 40.0%
GCAACCATTCTATTTGACCA+AGG + chr3_4:51402380-51402399 None:intergenic 40.0%
!! GCAAGCATTTTGAAAAGGAG+TGG + chr3_4:51402414-51402433 None:intergenic 40.0%
! AAGAAAAGGGTGGACTTTGG+AGG - chr3_4:51396244-51396263 Msa0505770:three_prime_UTR 45.0%
! AAAGGGTGGACTTTAGAGGA+AGG - chr3_4:51396401-51396420 Msa0505770:intron 45.0%
! AAGGGTGGACTTTAGAGGAA+GGG - chr3_4:51396402-51396421 Msa0505770:intron 45.0%
! GACTTTAGAGGAAGGGAATC+AGG - chr3_4:51396409-51396428 Msa0505770:intron 45.0%
GAAGGGAATCAGGTGAAGAA+AGG - chr3_4:51396419-51396438 Msa0505770:intron 45.0%
! GCAGAGAAGTTTTACGAGAG+AGG - chr3_4:51396445-51396464 Msa0505770:intron 45.0%
CGGTGAGAAGTTTCATGAGA+GGG - chr3_4:51396618-51396637 Msa0505770:intron 45.0%
GGTGAGAAGTTTCATGAGAG+GGG - chr3_4:51396619-51396638 Msa0505770:intron 45.0%
ATATGCTAATGAGGAAGGGG+TGG - chr3_4:51396684-51396703 Msa0505770:intron 45.0%
CCGATGATGAACGTACAATC+TGG - chr3_4:51396809-51396828 Msa0505770:intron 45.0%
TTAGCATCATCTTCCAACCC+TGG + chr3_4:51396979-51396998 None:intergenic 45.0%
! GGGTTTAGGGTTTAGGGTTT+AGG + chr3_4:51397565-51397584 None:intergenic 45.0%
CTCACTGGAAAGGAAAAAGG+TGG + chr3_4:51397594-51397613 None:intergenic 45.0%
GACTGTTTGAGAGAGCTCAT+AGG - chr3_4:51397927-51397946 Msa0505770:intron 45.0%
GAAGGAGAAGAAAAAGGACG+CGG - chr3_4:51398421-51398440 Msa0505770:CDS 45.0%
AGGCTGTATTGCACGGAATT+GGG + chr3_4:51398474-51398493 None:intergenic 45.0%
TAGGCTGTATTGCACGGAAT+TGG + chr3_4:51398475-51398494 None:intergenic 45.0%
ATAATTCACAGCTGTTGGGG+AGG - chr3_4:51398618-51398637 Msa0505770:intron 45.0%
! TTGTTCCGGTAATCTGAGAC+AGG - chr3_4:51398834-51398853 Msa0505770:intron 45.0%
! CTGATTGTGTTCTGGCTAAC+AGG - chr3_4:51399036-51399055 Msa0505770:intron 45.0%
TGCACTTACTAGACAATGGG+GGG - chr3_4:51399092-51399111 Msa0505770:intron 45.0%
TAGAATACCTGTGTATGGCC+AGG + chr3_4:51399138-51399157 None:intergenic 45.0%
TGGCCATACACAGGTATTCT+AGG - chr3_4:51399137-51399156 Msa0505770:intron 45.0%
GCATACGCAAATCCATATCC+TGG + chr3_4:51399300-51399319 None:intergenic 45.0%
TTGTTTACTGCGGCAGATTC+TGG + chr3_4:51399851-51399870 None:intergenic 45.0%
TAATGCACCGAATCCAAGTC+CGG - chr3_4:51399952-51399971 Msa0505770:intron 45.0%
GAGTATGTAGCAACACGAGT+TGG - chr3_4:51400120-51400139 Msa0505770:CDS 45.0%
AACAGAACCAGACATCGAAC+CGG - chr3_4:51400268-51400287 Msa0505770:intron 45.0%
CCATGGCTCAAAATTCTTGC+CGG + chr3_4:51400290-51400309 None:intergenic 45.0%
CTACGGCTCAGTTATTTGAG+CGG + chr3_4:51400359-51400378 None:intergenic 45.0%
AACTGAGCCGTAGACAATGT+CGG - chr3_4:51400366-51400385 Msa0505770:intron 45.0%
CCATGAACCGACATTGTCTA+CGG + chr3_4:51400376-51400395 None:intergenic 45.0%
ATCGAACTGGACGGTTCAAT+TGG + chr3_4:51400404-51400423 None:intergenic 45.0%
TGGGAAAACGGTATCTGTCT+TGG + chr3_4:51400576-51400595 None:intergenic 45.0%
CGCCACATCAATTGGGAAAA+CGG + chr3_4:51400588-51400607 None:intergenic 45.0%
AGCTAGCCATCATCTGCAAT+AGG + chr3_4:51400837-51400856 None:intergenic 45.0%
TTTGACAAATCGAGCTACGC+TGG + chr3_4:51400902-51400921 None:intergenic 45.0%
GTCCCCTTTCTTTGGTACTT+CGG + chr3_4:51401034-51401053 None:intergenic 45.0%
CTTATTTCCATGAACCCTGC+AGG + chr3_4:51401355-51401374 None:intergenic 45.0%
TAGCTATCCTGCAGAGTTCA+TGG - chr3_4:51401561-51401580 Msa0505770:CDS 45.0%
ATGGGCATTTAATCCAAGCC+AGG - chr3_4:51401604-51401623 Msa0505770:CDS 45.0%
ATCCAAGCCAGGTAAAACCT+TGG - chr3_4:51401615-51401634 Msa0505770:CDS 45.0%
! AACCAAGGTTTTACCTGGCT+TGG + chr3_4:51401620-51401639 None:intergenic 45.0%
! CTTGGAACCAAGGTTTTACC+TGG + chr3_4:51401625-51401644 None:intergenic 45.0%
AAACACACCAGCATGGAATG+TGG + chr3_4:51401722-51401741 None:intergenic 45.0%
GGTGCAGTGATAGAATGGAA+CGG + chr3_4:51401788-51401807 None:intergenic 45.0%
AAATGGGGGAGGAATGATGA+GGG + chr3_4:51401814-51401833 None:intergenic 45.0%
AAAATGGGGGAGGAATGATG+AGG + chr3_4:51401815-51401834 None:intergenic 45.0%
CCAGTGTACGTCACACAAAA+TGG + chr3_4:51401949-51401968 None:intergenic 45.0%
! CCATTTTGTGTGACGTACAC+TGG - chr3_4:51401946-51401965 Msa0505770:CDS 45.0%
TATTCCTACGTGGTGTCTTC+AGG + chr3_4:51402237-51402256 None:intergenic 45.0%
GCATAGGTACCTAACATCAC+CGG - chr3_4:51402435-51402454 Msa0505770:CDS 45.0%
AACCATTGGAATTGGTTGGC+CGG + chr3_4:51402457-51402476 None:intergenic 45.0%
!!! TATTATATTTTATATTTTCA+TGG - chr3_4:51402488-51402507 Msa0505770:CDS 5.0%
!!! ATTATATTTTATATTTTCAT+GGG - chr3_4:51402489-51402508 Msa0505770:CDS 5.0%
GGGGAAGATGAAGAAAAGGG+TGG - chr3_4:51396234-51396253 Msa0505770:three_prime_UTR 50.0%
ATTCCTCTCTTCACCCGATC+CGG + chr3_4:51396272-51396291 None:intergenic 50.0%
GGGGAAGATGAAGAAAAGGG+TGG - chr3_4:51396234-51396253 Msa0505770:three_prime_UTR 50.0%
GAACGGAATCGGGTGAAGAA+AGG - chr3_4:51396593-51396612 Msa0505770:intron 50.0%
GAATCGGGTGAAGAAAGGAG+CGG - chr3_4:51396598-51396617 Msa0505770:intron 50.0%
GCGGTGAGAAGTTTCATGAG+AGG - chr3_4:51396617-51396636 Msa0505770:intron 50.0%
CGGCTTCCATTTCTACTCAC+TGG + chr3_4:51397609-51397628 None:intergenic 50.0%
ATCAGGTGTTTCGCTCCCAA+AGG + chr3_4:51398241-51398260 None:intergenic 50.0%
!! TGGGCGTTCTGAGACATTTC+AGG + chr3_4:51398455-51398474 None:intergenic 50.0%
AAGGGCTAGGCTGTATTGCA+CGG + chr3_4:51398481-51398500 None:intergenic 50.0%
ATCTCCGGAAGATTAGGAGG+TGG + chr3_4:51398913-51398932 None:intergenic 50.0%
GCAATCTCCGGAAGATTAGG+AGG + chr3_4:51398916-51398935 None:intergenic 50.0%
CTTCCGGAGATTGCATTTGC+TGG - chr3_4:51398922-51398941 Msa0505770:intron 50.0%
CTAGACAATGGGGGGTTGTA+CGG - chr3_4:51399100-51399119 Msa0505770:intron 50.0%
CGAAGTGAAAGAAGCTTGGG+AGG - chr3_4:51399326-51399345 Msa0505770:intron 50.0%
TCTCAATGGTCACTGGTCAC+TGG - chr3_4:51399376-51399395 Msa0505770:intron 50.0%
TCACTGGTCACTGGTCACAT+TGG - chr3_4:51399385-51399404 Msa0505770:intron 50.0%
!! ATTCTTGCCGGTTCGATGTC+TGG + chr3_4:51400278-51400297 None:intergenic 50.0%
! CCGGCAAGAATTTTGAGCCA+TGG - chr3_4:51400287-51400306 Msa0505770:intron 50.0%
!! CCGTAGACAATGTCGGTTCA+TGG - chr3_4:51400373-51400392 Msa0505770:intron 50.0%
ACGTGCCATGCAAATCGAAG+AGG - chr3_4:51400610-51400629 Msa0505770:intron 50.0%
! GCTAGCTCAAAATCTGGAGC+AGG - chr3_4:51400850-51400869 Msa0505770:intron 50.0%
TAGCTATCCTGCAGGGTTCA+TGG - chr3_4:51401345-51401364 Msa0505770:intron 50.0%
ACTAGGCAAACACACCAGCA+TGG + chr3_4:51401729-51401748 None:intergenic 50.0%
TGTTTGCCTAGTCTCCATGC+CGG - chr3_4:51401737-51401756 Msa0505770:CDS 50.0%
GGTGTAAAGGTGGGACAAAC+CGG + chr3_4:51401759-51401778 None:intergenic 50.0%
CGGAAAAGCGGTGTAAAGGT+GGG + chr3_4:51401768-51401787 None:intergenic 50.0%
ACGGAAAAGCGGTGTAAAGG+TGG + chr3_4:51401769-51401788 None:intergenic 50.0%
GGAACGGAAAAGCGGTGTAA+AGG + chr3_4:51401772-51401791 None:intergenic 50.0%
GGAGTGGTGCAGTGATAGAA+TGG + chr3_4:51401793-51401812 None:intergenic 50.0%
AAGCTGAAGGGAGATGGTGT+TGG + chr3_4:51401870-51401889 None:intergenic 50.0%
TAGAGTCTGTTGCTGCCTAG+CGG - chr3_4:51401912-51401931 Msa0505770:CDS 50.0%
TACACCTGAAGACACCACGT+AGG - chr3_4:51402230-51402249 Msa0505770:CDS 50.0%
! ATTGGTTGGCCGGTGATGTT+AGG + chr3_4:51402447-51402466 None:intergenic 50.0%
! AGGGTGGACTTTGGAGGAAC+CGG - chr3_4:51396250-51396269 Msa0505770:three_prime_UTR 55.0%
! GGACTTTGGAGGAACCGGAT+CGG - chr3_4:51396255-51396274 Msa0505770:three_prime_UTR 55.0%
! GACTTTGGAGGAACCGGATC+GGG - chr3_4:51396256-51396275 Msa0505770:three_prime_UTR 55.0%
GGATCGGGTGAAGAGAGGAA+TGG - chr3_4:51396271-51396290 Msa0505770:three_prime_UTR 55.0%
GAAGGTGAGAGACGAGACTG+TGG - chr3_4:51396777-51396796 Msa0505770:intron 55.0%
ATTCACAGCTGTTGGGGAGG+AGG - chr3_4:51398621-51398640 Msa0505770:intron 55.0%
! GGAATTTTTCGCTGCGGCGA+AGG - chr3_4:51398873-51398892 Msa0505770:intron 55.0%
GTACGGACATCAGACAAGCC+TGG - chr3_4:51399117-51399136 Msa0505770:intron 55.0%
AGACAAGCCTGGCCATACAC+AGG - chr3_4:51399128-51399147 Msa0505770:intron 55.0%
CACGTCGCGCCACATCAATT+GGG + chr3_4:51400595-51400614 None:intergenic 55.0%
! AGCATGGAATGTGGCACTGG+CGG + chr3_4:51401713-51401732 None:intergenic 55.0%
ACCAGCATGGAATGTGGCAC+TGG + chr3_4:51401716-51401735 None:intergenic 55.0%
GACAAACCGGCATGGAGACT+AGG + chr3_4:51401746-51401765 None:intergenic 55.0%
AAAGGTGGGACAAACCGGCA+TGG + chr3_4:51401754-51401773 None:intergenic 55.0%
AGCCAACATGGTCCACACCT+CGG - chr3_4:51401844-51401863 Msa0505770:CDS 55.0%
GCTAGGCAGCAACAGACTCT+AGG + chr3_4:51401913-51401932 None:intergenic 55.0%
AGAGTCTGTTGCTGCCTAGC+GGG - chr3_4:51401913-51401932 Msa0505770:CDS 55.0%
CACCGGCCAACCAATTCCAA+TGG - chr3_4:51402452-51402471 Msa0505770:CDS 55.0%
GAACCGGATCGGGTGAAGAG+AGG - chr3_4:51396266-51396285 Msa0505770:three_prime_UTR 60.0%
GCACGTCGCGCCACATCAAT+TGG + chr3_4:51400596-51400615 None:intergenic 60.0%
GCCAGTGCCACATTCCATGC+TGG - chr3_4:51401712-51401731 Msa0505770:CDS 60.0%
GGGGAGGAATGATGAGGGAG+TGG + chr3_4:51401809-51401828 None:intergenic 60.0%
!! AGATGGTGTTGGCCGAGGTG+TGG + chr3_4:51401859-51401878 None:intergenic 60.0%
!! AAGGGAGATGGTGTTGGCCG+AGG + chr3_4:51401864-51401883 None:intergenic 60.0%
ATGGGGCTGTATGTCCCGCT+AGG + chr3_4:51401930-51401949 None:intergenic 60.0%
GGCCGAGGTGTGGACCATGT+TGG + chr3_4:51401849-51401868 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 51395944 51402647 51395944 ID=Msa0505770;Name=Msa0505770
chr3_4 mRNA 51395944 51402647 51395944 ID=Msa0505770-mRNA-1;Parent=Msa0505770;Name=Msa0505770-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.90|1|0.9|0.81|11|460|664
chr3_4 exon 51395944 51396390 51395944 ID=Msa0505770-mRNA-1:exon:11239;Parent=Msa0505770-mRNA-1
chr3_4 exon 51397654 51397747 51397654 ID=Msa0505770-mRNA-1:exon:11238;Parent=Msa0505770-mRNA-1
chr3_4 exon 51397836 51397871 51397836 ID=Msa0505770-mRNA-1:exon:11237;Parent=Msa0505770-mRNA-1
chr3_4 exon 51397960 51398047 51397960 ID=Msa0505770-mRNA-1:exon:11236;Parent=Msa0505770-mRNA-1
chr3_4 exon 51398368 51398477 51398368 ID=Msa0505770-mRNA-1:exon:11235;Parent=Msa0505770-mRNA-1
chr3_4 exon 51399238 51399342 51399238 ID=Msa0505770-mRNA-1:exon:11234;Parent=Msa0505770-mRNA-1
chr3_4 exon 51399442 51399533 51399442 ID=Msa0505770-mRNA-1:exon:11233;Parent=Msa0505770-mRNA-1
chr3_4 exon 51399648 51399735 51399648 ID=Msa0505770-mRNA-1:exon:11232;Parent=Msa0505770-mRNA-1
chr3_4 exon 51399843 51399962 51399843 ID=Msa0505770-mRNA-1:exon:11231;Parent=Msa0505770-mRNA-1
chr3_4 exon 51400065 51400183 51400065 ID=Msa0505770-mRNA-1:exon:11230;Parent=Msa0505770-mRNA-1
chr3_4 exon 51401492 51402647 51401492 ID=Msa0505770-mRNA-1:exon:11229;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51401492 51402647 51401492 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51400065 51400183 51400065 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51399843 51399962 51399843 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51399648 51399735 51399648 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51399442 51399533 51399442 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51399238 51399342 51399238 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51398368 51398477 51398368 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51397960 51398047 51397960 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51397836 51397871 51397836 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 CDS 51397667 51397747 51397667 ID=Msa0505770-mRNA-1:cds;Parent=Msa0505770-mRNA-1
chr3_4 three_prime_UTR 51397654 51397666 51397654 ID=Msa0505770-mRNA-1:three_prime_utr;Parent=Msa0505770-mRNA-1
chr3_4 three_prime_UTR 51395944 51396390 51395944 ID=Msa0505770-mRNA-1:three_prime_utr;Parent=Msa0505770-mRNA-1
Gene Sequence

>Msa0505770

ATGTCTACTGAGGAAGTTTTAAGGAATAAGATTAGAAAAAAGCCTAAAGTTGGTGTAAAAATTTCTAGGAACTCGTCTAGAATTGTAAAAGATGAAGAGTTTAGAGGAAATGAAGAAAAGAGTGGTTATGAGAGAAGAAAGTTTTATGAGAGAGGTGAAAATGATTATGATAGAGGAAATAGGTATAAGGGGAAATTGAAGAGAAATGAAGAGTTTAGAGGAGGTGAAAAAAAGAGTGGTTATGAGAGAAGAAAGTTTTATGAGAGAGGTGATAGAGAAAATGGGTATAAGGGGAAGATGAAGAAAAGGGTGGACTTTGGAGGAACCGGATCGGGTGAAGAGAGGAATGGTGAGAAGTTTTATGAGAGAGGGAAGTTGAGAAGTAGAAAGGATGAGAATGGTTTTAATGAGGATACGGTTTTTGATAAGGAAAATGGGTTTAAGGGGAAGATGAAGAAAAGGGTGGACTTTAGAGGAAGGGAATCAGGTGAAGAAAGGAGTGCAGAGAAGTTTTACGAGAGAGGGAAGTTGAGAACTTCTAAGGACTCGTCGAGAACTAGAAATGATGAGAATCATTTTAACAAGGATGTGGTTTTTGATAGGGAAAATGGGTATAAGGGGAAGTTGAAGAAAAATGTAAACTTTAAAGGAACGGAATCGGGTGAAGAAAGGAGCGGTGAGAAGTTTCATGAGAGGGGAAAGTTGAAAAATTTAGATTCTTTTGGGAGGAAGAAGAGGGTATATGCTAATGAGGAAGGGGTGGATGAAAGCGAAAAATCATGGAGTAGTGTGAAGATATCGAAGAAGAAACCTTTGTTTAAGAAAAGGGAGAAGAAGGTGAGAGACGAGACTGTGGAAGAGAAAACCGATGATGAACGTACAATCTGGGATTTCGGTAAATTGAAGCAGGCAAAATCCAAAAAGAAGCTTTCAAATCAAAGTTTGAAGGACAAGAAAGAAATTGATGGAAAAGATGATAGTGCTGAGAAAGTTAGAGAAGTTGTTTATCCTTCAAAATCTGACATGAAAAAACCAGGGTTGGAAGATGATGCTAAGAGACTAGATGATCGCCCCTTTAAGAAAAAGAAAAGGGTGATGAGGATTGATCCATATGATATCTCAAACAAGAGACTAGATGATTCCATTGCTGTTGATGGAAGTACAGAAGAGAAGGAGAAGAAAAAGGACGCGGAGAAAGAGCCTGAAATGTCTCAGAACGCCCAATTCCGTGCAATACAGCCTAGCCCTTCAATACTTACCTTTGTGGAAAAAAATCTGTTGGGGAGGAGGCGCATGATAGAAATAAAAAGGGCCGGCTACAATATAGAACTTCCTATGCCATTAGATAATATTCCCTTCTCTAAAAGTTCCGACAGAGAGAACATTGAAGAAAATGTTTTCAGAAACAGATTGGAATTTTTCGCTGCGGCGAAGGTCTCATCGTCATTTCCACCTCCTAATCTTCCGGAGATTGCATTTGCTGGAAAGTCAAATGTTGGTAAATCATCTCTTCTTAATGCACTTACTAGACAATGGGGGGTTGTACGGACATCAGACAAGCCTGGCCATACACAGACAATAAACTTCTTCAACTTGGGAACAAAGCTTAGCTTAGTTGATTTGCCAGGATATGGATTTGCGTATGCAAAAGACGAAGTGAAAGAAGCTTGGGAGGACCTTGTAAAGGAGTATGTAGCAACACGAGTTGGTCTCAAACAAGTATGCCTTTTGATTGATACAAAATGGGGCATGAAACCAAGAGATATTGAACTGATTGACTTAATGGAAAGATCAAAAACTAAATACCAGATAGTATTAACCAAGACAGATACCGTTTTCCCAATTGATGTGGCGCGACGTGCCATGCAAATCGAAGAGAGTCTCTTGCCGAACAAGTCTGTAATTCAACCTCTGATGATGGCTAGCTCAAAATCTGGAGCAGGCATCAGAAGCTTGAGAACTGTTCTTGCCAGCGTAGCTCGATTTGTCAAATAA
Protein sequence

>Msa0505770

MSTEEVLRNKIRKKPKVGVKISRNSSRIVKDEEFRGNEEKSGYERRKFYERGENDYDRGNRYKGKLKRNEEFRGGEKKSGYERRKFYERGDRENGYKGKMKKRVDFGGTGSGEERNGEKFYERGKLRSRKDENGFNEDTVFDKENGFKGKMKKRVDFRGRESGEERSAEKFYERGKLRTSKDSSRTRNDENHFNKDVVFDRENGYKGKLKKNVNFKGTESGEERSGEKFHERGKLKNLDSFGRKKRVYANEEGVDESEKSWSSVKISKKKPLFKKREKKVRDETVEEKTDDERTIWDFGKLKQAKSKKKLSNQSLKDKKEIDGKDDSAEKVREVVYPSKSDMKKPGLEDDAKRLDDRPFKKKKRVMRIDPYDISNKRLDDSIAVDGSTEEKEKKKDAEKEPEMSQNAQFRAIQPSPSILTFVEKNLLGRRRMIEIKRAGYNIELPMPLDNIPFSKSSDRENIEENVFRNRLEFFAAAKVSSSFPPPNLPEIAFAGKSNVGKSSLLNALTRQWGVVRTSDKPGHTQTINFFNLGTKLSLVDLPGYGFAYAKDEVKEAWEDLVKEYVATRVGLKQVCLLIDTKWGMKPRDIELIDLMERSKTKYQIVLTKTDTVFPIDVARRAMQIEESLLPNKSVIQPLMMASSKSGAGIRSLRTVLASVARFVK*