Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165230 | MCI24820.1 | 86.111 | 36 | 5 | 0 | 24 | 59 | 1 | 36 | 1.09e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165230 | A0A392QMC5 | 86.111 | 36 | 5 | 0 | 24 | 59 | 1 | 36 | 5.22e-14 | 68.9 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1165230 | 0.802901 | 4.501757e-49 | -8.615850e-47 |
| Msa0651050 | Msa1165230 | 0.808549 | 2.933097e-50 | -8.615850e-47 |
| Msa0687030 | Msa1165230 | 0.809147 | 2.184619e-50 | -8.615850e-47 |
| Msa0765080 | Msa1165230 | 0.805772 | 1.136154e-49 | -8.615850e-47 |
| Msa0123560 | Msa1165230 | 0.814026 | 1.899660e-51 | -8.615850e-47 |
| Msa0217670 | Msa1165230 | 0.811333 | 7.376950e-51 | -8.615850e-47 |
| Msa0374930 | Msa1165230 | 0.807376 | 5.209629e-50 | -8.615850e-47 |
| Msa0385500 | Msa1165230 | 0.816195 | 6.267731e-52 | -8.615850e-47 |
| Msa1031660 | Msa1165230 | 0.805496 | 1.298163e-49 | -8.615850e-47 |
| Msa1070720 | Msa1165230 | 0.817064 | 4.002744e-52 | -8.615850e-47 |
| Msa0257490 | Msa1165230 | 0.810962 | 8.880381e-51 | -8.615850e-47 |
| Msa0272300 | Msa1165230 | 0.820395 | 7.016075e-53 | -8.615850e-47 |
| Msa1118860 | Msa1165230 | 0.800020 | 1.753268e-48 | -8.615850e-47 |
| Msa1130980 | Msa1165230 | 0.804806 | 1.810226e-49 | -8.615850e-47 |
| Msa1165230 | Msa1228040 | 0.839035 | 2.015585e-57 | -8.615850e-47 |
| Msa1165230 | Msa1244600 | 0.812498 | 4.114340e-51 | -8.615850e-47 |
| Msa1165230 | Msa1269790 | 0.808084 | 3.684793e-50 | -8.615850e-47 |
| Msa1165230 | Msa1305700 | 0.819156 | 1.346667e-52 | -8.615850e-47 |
| Msa1165230 | Msa1342890 | 0.816799 | 4.589230e-52 | -8.615850e-47 |
| Msa1165230 | Msa1392980 | 0.847942 | 8.402406e-60 | -8.615850e-47 |
| Msa1165230 | Msa1418340 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa1165230 | Msa1434420 | -0.802560 | 5.294543e-49 | -8.615850e-47 |
| Msa1165230 | Msa1451560 | 0.801859 | 7.380751e-49 | -8.615850e-47 |
| Msa0531530 | Msa1165230 | 0.842635 | 2.293096e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 72 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAATGGATTGCTGGTTTA+AGG | 0.127791 | 7_4:-57082515 | Msa1165230:five_prime_UTR |
| AGGAAATTTGCAATCCCTTT+TGG | 0.229927 | 7_4:-57082027 | Msa1165230:five_prime_UTR |
| CACACTCTAACGCACTTTCT+TGG | 0.275401 | 7_4:-57082258 | Msa1165230:five_prime_UTR |
| CAACACTCTCCCGAGGTTAA+TGG | 0.283342 | 7_4:+57079126 | None:intergenic |
| TATTTATGGTCTGAAATTAA+AGG | 0.302509 | 7_4:+57079243 | None:intergenic |
| TGTCAATGTTATGATGTAAT+TGG | 0.304683 | 7_4:+57082363 | None:intergenic |
| ATATCTCAAAATGCTAAATA+AGG | 0.305122 | 7_4:+57082683 | None:intergenic |
| TCTAAATGTAAATGGATTGC+TGG | 0.328544 | 7_4:-57082522 | Msa1165230:five_prime_UTR |
| ATTCTACGATATAATTAAAC+TGG | 0.357983 | 7_4:+57082216 | None:intergenic |
| CATGCGATCCCTACAATCTA+TGG | 0.359919 | 7_4:-57079380 | Msa1165230:three_prime_UTR |
| CATTTAGAAAACATTATACT+TGG | 0.369154 | 7_4:+57082537 | None:intergenic |
| CCGGTCTTTCAAGTTAATCT+TGG | 0.393764 | 7_4:-57082708 | Msa1165230:five_prime_UTR |
| TTCAAATTTCATGTTAATCC+TGG | 0.405244 | 7_4:-57082560 | Msa1165230:five_prime_UTR |
| TACGTGAAGACCCGCCCAAA+AGG | 0.407251 | 7_4:+57082012 | None:intergenic |
| CATTTACATTTGTGGGTGTT+GGG | 0.409870 | 7_4:-57079179 | Msa1165230:three_prime_UTR |
| TATAATTAAACTGGAATGCT+AGG | 0.431144 | 7_4:+57082225 | None:intergenic |
| ATTATGTCTATATTAACATC+AGG | 0.433148 | 7_4:-57082176 | Msa1165230:five_prime_UTR |
| TACATGACATTTACATTTGT+GGG | 0.433285 | 7_4:-57079186 | Msa1165230:three_prime_UTR |
| TACAAGAGCATGTGAGGGTT+GGG | 0.437716 | 7_4:+57082630 | None:intergenic |
| TTGCCTCTGACTCTGAGAAC+TGG | 0.453045 | 7_4:+57081917 | None:intergenic |
| AACATTGTCTTTATTGAGGA+AGG | 0.455389 | 7_4:-57082060 | Msa1165230:five_prime_UTR |
| ATTCTACGATATAATTAAAC+CGG | 0.458230 | 7_4:+57082327 | None:intergenic |
| AACGATGATAACAATGGATC+AGG | 0.458389 | 7_4:+57081966 | None:intergenic |
| AAAAGATGTGAGTTTGTTCA+AGG | 0.461515 | 7_4:-57079497 | Msa1165230:CDS |
| ATTCAACATTGTCTTTATTG+AGG | 0.468021 | 7_4:-57082064 | Msa1165230:five_prime_UTR |
| ACATTTACATTTGTGGGTGT+TGG | 0.472768 | 7_4:-57079180 | Msa1165230:three_prime_UTR |
| AGTCAAGGATAAGGAAGAAA+AGG | 0.473090 | 7_4:-57079522 | Msa1165230:CDS |
| TGTTTCTGCTAACTCTTACA+TGG | 0.476878 | 7_4:-57082744 | Msa1165230:five_prime_UTR |
| TTCTTTATAAAATGTCATCA+AGG | 0.479997 | 7_4:+57079456 | None:intergenic |
| AGAAAACATTATACTTGGCC+AGG | 0.485123 | 7_4:+57082542 | None:intergenic |
| GTGAATACGTGCAGCGAAAG+AGG | 0.488972 | 7_4:-57082109 | Msa1165230:five_prime_UTR |
| ATGACTGCTGGTTGCTGCAG+TGG | 0.494944 | 7_4:-57079422 | Msa1165230:three_prime_UTR |
| GTACATGACATTTACATTTG+TGG | 0.499961 | 7_4:-57079187 | Msa1165230:three_prime_UTR |
| TAAAATGTCATCAAGGAAAG+TGG | 0.500944 | 7_4:+57079463 | None:intergenic |
| TACCTTGTCAGTCAAGGATA+AGG | 0.503334 | 7_4:-57079531 | Msa1165230:CDS |
| TATTAACATCAGGGTGGTAG+TGG | 0.512251 | 7_4:-57082166 | Msa1165230:five_prime_UTR |
| AATTCATCTGTGATGACTGC+TGG | 0.520104 | 7_4:-57079434 | Msa1165230:exon |
| TAGGGCATACCATAGATTGT+AGG | 0.525341 | 7_4:+57079371 | None:intergenic |
| ACATGGTCTTGTATACTATC+CGG | 0.529271 | 7_4:-57082727 | Msa1165230:five_prime_UTR |
| CCAAGATTAACTTGAAAGAC+CGG | 0.531367 | 7_4:+57082708 | None:intergenic |
| ACTGGAAAATTCATCAGCTA+CGG | 0.536485 | 7_4:+57081935 | None:intergenic |
| AGGGCATACCATAGATTGTA+GGG | 0.539987 | 7_4:+57079372 | None:intergenic |
| AATACATTCACAACTTCACT+AGG | 0.542782 | 7_4:+57079352 | None:intergenic |
| ACGTGAAGACCCGCCCAAAA+GGG | 0.543362 | 7_4:+57082013 | None:intergenic |
| TGCAGCGAAAGAGGAAATCA+AGG | 0.550811 | 7_4:-57082100 | Msa1165230:five_prime_UTR |
| AGTGTTGAGTTATGCTAATG+AGG | 0.551237 | 7_4:-57079110 | Msa1165230:three_prime_UTR |
| ATACAAGAGCATGTGAGGGT+TGG | 0.556279 | 7_4:+57082629 | None:intergenic |
| GACGCCTACCTTGTCAGTCA+AGG | 0.556323 | 7_4:-57079537 | Msa1165230:CDS |
| CTTATGTCTTGAGAAATGCT+AGG | 0.556503 | 7_4:-57082287 | Msa1165230:five_prime_UTR |
| TTATGTCTTGAGAAATGCTA+GGG | 0.557920 | 7_4:-57082286 | Msa1165230:five_prime_UTR |
| CTGGAAAATTCATCAGCTAC+GGG | 0.561525 | 7_4:+57081936 | None:intergenic |
| GAAAAGACACCATTAACCTC+GGG | 0.564719 | 7_4:-57079135 | Msa1165230:three_prime_UTR |
| ATGTAAATGTCATGTACAGT+AGG | 0.566184 | 7_4:+57079193 | None:intergenic |
| TTTCCAGTTCTCAGAGTCAG+AGG | 0.568276 | 7_4:-57081920 | Msa1165230:CDS |
| GTGTTGAGTTATGCTAATGA+GGG | 0.570494 | 7_4:-57079109 | Msa1165230:three_prime_UTR |
| ATAATTAAACTGGAATGCTA+GGG | 0.573733 | 7_4:+57082226 | None:intergenic |
| AAAGCATACAAGAGCATGTG+AGG | 0.577183 | 7_4:+57082624 | None:intergenic |
| TGAAAAGACACCATTAACCT+CGG | 0.578510 | 7_4:-57079136 | Msa1165230:three_prime_UTR |
| TTGAGGAAGGAGCTGCGAGA+AGG | 0.591672 | 7_4:-57082047 | Msa1165230:five_prime_UTR |
| TTCCTTATCCTTGACTGACA+AGG | 0.591721 | 7_4:+57079529 | None:intergenic |
| ACATGAAATTTGAAAGACAT+GGG | 0.593896 | 7_4:+57082569 | None:intergenic |
| AACATGAAATTTGAAAGACA+TGG | 0.597112 | 7_4:+57082568 | None:intergenic |
| AAGAGGAAATCAAGGAAAGG+TGG | 0.632824 | 7_4:-57082092 | Msa1165230:five_prime_UTR |
| TTATCCTTGACTGACAAGGT+AGG | 0.634664 | 7_4:+57079533 | None:intergenic |
| AATATAAACGATGATAACAA+TGG | 0.636064 | 7_4:+57081960 | None:intergenic |
| CGAAAGAGGAAATCAAGGAA+AGG | 0.643278 | 7_4:-57082095 | Msa1165230:five_prime_UTR |
| TTATGTCTATATTAACATCA+GGG | 0.655225 | 7_4:-57082175 | Msa1165230:five_prime_UTR |
| GATCGTTGTGAAATAAGATG+TGG | 0.655926 | 7_4:-57079328 | Msa1165230:three_prime_UTR |
| ATACATTCACAACTTCACTA+GGG | 0.669389 | 7_4:+57079353 | None:intergenic |
| AAGCATACAAGAGCATGTGA+GGG | 0.692997 | 7_4:+57082625 | None:intergenic |
| CATAACTCAACACTCTCCCG+AGG | 0.710171 | 7_4:+57079119 | None:intergenic |
| TGTCTATATTAACATCAGGG+TGG | 0.753699 | 7_4:-57082172 | Msa1165230:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTACTTATAATTTTATT+GGG | - | chr7_4:57080969-57080988 | Msa1165230:intron | 10.0% |
| !!! | TAATGTTTTCTAAATGTAAA+TGG | - | chr7_4:57079291-57079310 | Msa1165230:three_prime_UTR | 15.0% |
| !!! | GTGATTACTTATAATTTTAT+TGG | - | chr7_4:57080968-57080987 | Msa1165230:intron | 15.0% |
| !!! | ATATGTTAAATAGACAATTT+TGG | - | chr7_4:57081277-57081296 | Msa1165230:intron | 15.0% |
| !!! | CTATTTTCATTCAATATTTA+TGG | + | chr7_4:57082595-57082614 | None:intergenic | 15.0% |
| !! | ATATCTCAAAATGCTAAATA+AGG | + | chr7_4:57079141-57079160 | None:intergenic | 20.0% |
| !! | CATTTAGAAAACATTATACT+TGG | + | chr7_4:57079287-57079306 | None:intergenic | 20.0% |
| !! | AGATTAAAAAAACACATTAG+TGG | + | chr7_4:57079359-57079378 | None:intergenic | 20.0% |
| !!! | TTAAAAAGTACAACAACAAA+GGG | + | chr7_4:57079393-57079412 | None:intergenic | 20.0% |
| !!! | TTTAAAAAGTACAACAACAA+AGG | + | chr7_4:57079394-57079413 | None:intergenic | 20.0% |
| !! | ATTCTACGATATAATTAAAC+CGG | + | chr7_4:57079497-57079516 | None:intergenic | 20.0% |
| !! | ATTCTACGATATAATTAAAC+TGG | + | chr7_4:57079497-57079516 | None:intergenic | 20.0% |
| !! | ATTATGTCTATATTAACATC+AGG | - | chr7_4:57079645-57079664 | Msa1165230:intron | 20.0% |
| !! | TTATGTCTATATTAACATCA+GGG | - | chr7_4:57079646-57079665 | Msa1165230:intron | 20.0% |
| !! | AATATAAACGATGATAACAA+TGG | + | chr7_4:57079864-57079883 | None:intergenic | 20.0% |
| !! | ATTATCAAAAGCAATATTAG+TGG | + | chr7_4:57080013-57080032 | None:intergenic | 20.0% |
| !!! | TTGTAAAGGTATAAATCATT+AGG | + | chr7_4:57080158-57080177 | None:intergenic | 20.0% |
| !!! | CTTTCCACTATTTTAAAAAA+TGG | - | chr7_4:57080340-57080359 | Msa1165230:intron | 20.0% |
| !!! | TTCACCATTTTTTAAAATAG+TGG | + | chr7_4:57080347-57080366 | None:intergenic | 20.0% |
| !!! | ACTATTTTAAAAAATGGTGA+AGG | - | chr7_4:57080346-57080365 | Msa1165230:intron | 20.0% |
| !! | ATAACATGATTATCATCAAA+TGG | - | chr7_4:57080503-57080522 | Msa1165230:intron | 20.0% |
| !! | ATAGTTAAATAGGTTATGTA+TGG | + | chr7_4:57080907-57080926 | None:intergenic | 20.0% |
| !! | CTAAAATGTATGATATTCTT+GGG | + | chr7_4:57081216-57081235 | None:intergenic | 20.0% |
| !!! | AGATATGACATTGTTTTTAA+TGG | + | chr7_4:57082105-57082124 | None:intergenic | 20.0% |
| !! | TTCTTTATAAAATGTCATCA+AGG | + | chr7_4:57082368-57082387 | None:intergenic | 20.0% |
| !!! | TATTTATGGTCTGAAATTAA+AGG | + | chr7_4:57082581-57082600 | None:intergenic | 20.0% |
| ! | ACATGAAATTTGAAAGACAT+GGG | + | chr7_4:57079255-57079274 | None:intergenic | 25.0% |
| ! | AACATGAAATTTGAAAGACA+TGG | + | chr7_4:57079256-57079275 | None:intergenic | 25.0% |
| ! | TTCAAATTTCATGTTAATCC+TGG | - | chr7_4:57079261-57079280 | Msa1165230:three_prime_UTR | 25.0% |
| ! | TGTCAATGTTATGATGTAAT+TGG | + | chr7_4:57079461-57079480 | None:intergenic | 25.0% |
| ! | ATAATTAAACTGGAATGCTA+GGG | + | chr7_4:57079598-57079617 | None:intergenic | 25.0% |
| ! | TATAATTAAACTGGAATGCT+AGG | + | chr7_4:57079599-57079618 | None:intergenic | 25.0% |
| ! | ATTCAACATTGTCTTTATTG+AGG | - | chr7_4:57079757-57079776 | Msa1165230:intron | 25.0% |
| !!! | AATGCAAATTTTTTGTAGCA+TGG | - | chr7_4:57080087-57080106 | Msa1165230:intron | 25.0% |
| ! | TGATTTATACCTTTACAACT+AGG | - | chr7_4:57080160-57080179 | Msa1165230:intron | 25.0% |
| !! | TTAAAATAGTGGAAAGTAGT+GGG | + | chr7_4:57080336-57080355 | None:intergenic | 25.0% |
| !! | TTTAAAATAGTGGAAAGTAG+TGG | + | chr7_4:57080337-57080356 | None:intergenic | 25.0% |
| ! | TTTAAAAAATGGTGAAGGAA+AGG | - | chr7_4:57080351-57080370 | Msa1165230:intron | 25.0% |
| ! | TTAAAAAATGGTGAAGGAAA+GGG | - | chr7_4:57080352-57080371 | Msa1165230:intron | 25.0% |
| ! | TAACCTATTTAACTATTGCA+CGG | - | chr7_4:57080911-57080930 | Msa1165230:intron | 25.0% |
| ! | AATACTTCTCTATATGTTCA+GGG | + | chr7_4:57081079-57081098 | None:intergenic | 25.0% |
| ! | AAATACTTCTCTATATGTTC+AGG | + | chr7_4:57081080-57081099 | None:intergenic | 25.0% |
| ! | GCTAAAATGTATGATATTCT+TGG | + | chr7_4:57081217-57081236 | None:intergenic | 25.0% |
| !!! | AGAATATCATACATTTTAGC+AGG | - | chr7_4:57081217-57081236 | Msa1165230:intron | 25.0% |
| ! | ACATATTTGTCTACAATGTA+CGG | + | chr7_4:57081263-57081282 | None:intergenic | 25.0% |
| !! | ATATGTTAAGTAGACCATTT+TGG | - | chr7_4:57081358-57081377 | Msa1165230:intron | 25.0% |
| !! | TAATAAAAGGAGTGATTTTC+CGG | - | chr7_4:57081411-57081430 | Msa1165230:intron | 25.0% |
| !!! | TTAATTGTCTTTTTTCAGAG+AGG | - | chr7_4:57081942-57081961 | Msa1165230:exon | 25.0% |
| !! | GTTTAAAACAAGCAGATAAA+AGG | + | chr7_4:57082069-57082088 | None:intergenic | 25.0% |
| !! | GTTTAAAACTAGAAGTTACA+AGG | + | chr7_4:57082238-57082257 | None:intergenic | 25.0% |
| !! | GTAAATTTTGTTCAGAAATG+TGG | - | chr7_4:57082260-57082279 | Msa1165230:five_prime_UTR | 25.0% |
| ! | TACATGACATTTACATTTGT+GGG | - | chr7_4:57082635-57082654 | Msa1165230:five_prime_UTR | 25.0% |
| !! | TCTAAATGTAAATGGATTGC+TGG | - | chr7_4:57079299-57079318 | Msa1165230:three_prime_UTR | 30.0% |
| !!! | TTGACAGTAGAAGTTTTTTC+CGG | - | chr7_4:57079475-57079494 | Msa1165230:CDS | 30.0% |
| TTATGTCTTGAGAAATGCTA+GGG | - | chr7_4:57079535-57079554 | Msa1165230:CDS | 30.0% | |
| AACATTGTCTTTATTGAGGA+AGG | - | chr7_4:57079761-57079780 | Msa1165230:intron | 30.0% | |
| CATGTTTGACATTGAAGAAA+TGG | - | chr7_4:57080040-57080059 | Msa1165230:intron | 30.0% | |
| GATTATAAGAACACTAACGT+AGG | - | chr7_4:57080125-57080144 | Msa1165230:intron | 30.0% | |
| ! | TAGAATTAGCCTAGTTGTAA+AGG | + | chr7_4:57080172-57080191 | None:intergenic | 30.0% |
| TTACAACTAGGCTAATTCTA+TGG | - | chr7_4:57080172-57080191 | Msa1165230:intron | 30.0% | |
| ! | TTCATGTTTCATTTCTAGGA+TGG | + | chr7_4:57080460-57080479 | None:intergenic | 30.0% |
| CCTATTCATGTTTCATTTCT+AGG | + | chr7_4:57080464-57080483 | None:intergenic | 30.0% | |
| CCTAGAAATGAAACATGAAT+AGG | - | chr7_4:57080461-57080480 | Msa1165230:intron | 30.0% | |
| AATGAACCTGGAATTATGAT+AGG | - | chr7_4:57080556-57080575 | Msa1165230:intron | 30.0% | |
| !! | TGGTGCACAACATTTATTTT+CGG | + | chr7_4:57080887-57080906 | None:intergenic | 30.0% |
| GTAAATTGTGTGTCTTACAA+TGG | - | chr7_4:57081002-57081021 | Msa1165230:intron | 30.0% | |
| TTCTATACTGTCTTCATCTT+TGG | + | chr7_4:57081039-57081058 | None:intergenic | 30.0% | |
| ! | TGATATGAAAACCTAGCTTT+GGG | + | chr7_4:57081130-57081149 | None:intergenic | 30.0% |
| TTGATATGAAAACCTAGCTT+TGG | + | chr7_4:57081131-57081150 | None:intergenic | 30.0% | |
| ! | AATCTTTTTGTGATATGCTG+AGG | - | chr7_4:57081149-57081168 | Msa1165230:intron | 30.0% |
| ! | TTTTAGCAGGTAAAACATGT+TGG | - | chr7_4:57081230-57081249 | Msa1165230:intron | 30.0% |
| !! | GGTGTATTTGAAATTTTAGC+AGG | - | chr7_4:57081298-57081317 | Msa1165230:intron | 30.0% |
| ! | TTTTAGCAGGTAAAACATGT+TGG | - | chr7_4:57081230-57081249 | Msa1165230:intron | 30.0% |
| ACAGTTCAAATACACCAAAA+TGG | + | chr7_4:57081375-57081394 | None:intergenic | 30.0% | |
| ! | TCACTCCTTTTATTAGGAAT+GGG | + | chr7_4:57081406-57081425 | None:intergenic | 30.0% |
| ! | ATCACTCCTTTTATTAGGAA+TGG | + | chr7_4:57081407-57081426 | None:intergenic | 30.0% |
| ! | GGAAAATCACTCCTTTTATT+AGG | + | chr7_4:57081412-57081431 | None:intergenic | 30.0% |
| TCTTATTACTATCTCTCTCT+TGG | + | chr7_4:57081601-57081620 | None:intergenic | 30.0% | |
| TGTTAAAAGCAGTAAAAGCA+CGG | + | chr7_4:57081695-57081714 | None:intergenic | 30.0% | |
| CAAAAAAAGCTAGTCATAGT+GGG | + | chr7_4:57081785-57081804 | None:intergenic | 30.0% | |
| ACAAAAAAAGCTAGTCATAG+TGG | + | chr7_4:57081786-57081805 | None:intergenic | 30.0% | |
| !!! | ATGACTAGCTTTTTTTGTGT+AGG | - | chr7_4:57081788-57081807 | Msa1165230:intron | 30.0% |
| !! | GGGTTGATCATTTTATTCAT+TGG | - | chr7_4:57081918-57081937 | Msa1165230:CDS | 30.0% |
| !!! | CAACTCATTTTTTTGCAAGA+AGG | + | chr7_4:57082152-57082171 | None:intergenic | 30.0% |
| ! | AAAAGATGTGAGTTTGTTCA+AGG | - | chr7_4:57082324-57082343 | Msa1165230:five_prime_UTR | 30.0% |
| TAAAATGTCATCAAGGAAAG+TGG | + | chr7_4:57082361-57082380 | None:intergenic | 30.0% | |
| ATACATTCACAACTTCACTA+GGG | + | chr7_4:57082471-57082490 | None:intergenic | 30.0% | |
| AATACATTCACAACTTCACT+AGG | + | chr7_4:57082472-57082491 | None:intergenic | 30.0% | |
| ATGTAAATGTCATGTACAGT+AGG | + | chr7_4:57082631-57082650 | None:intergenic | 30.0% | |
| GTACATGACATTTACATTTG+TGG | - | chr7_4:57082634-57082653 | Msa1165230:five_prime_UTR | 30.0% | |
| ! | TGTTTCTGCTAACTCTTACA+TGG | - | chr7_4:57079077-57079096 | Msa1165230:three_prime_UTR | 35.0% |
| !! | ACATGGTCTTGTATACTATC+CGG | - | chr7_4:57079094-57079113 | Msa1165230:three_prime_UTR | 35.0% |
| ! | CCAAGATTAACTTGAAAGAC+CGG | + | chr7_4:57079116-57079135 | None:intergenic | 35.0% |
| ! | GCTCTTGTATGCTTTTGTTA+AGG | - | chr7_4:57079205-57079224 | Msa1165230:three_prime_UTR | 35.0% |
| AGAAAACATTATACTTGGCC+AGG | + | chr7_4:57079282-57079301 | None:intergenic | 35.0% | |
| !! | GTAAATGGATTGCTGGTTTA+AGG | - | chr7_4:57079306-57079325 | Msa1165230:three_prime_UTR | 35.0% |
| CTTATGTCTTGAGAAATGCT+AGG | - | chr7_4:57079534-57079553 | Msa1165230:CDS | 35.0% | |
| TGTCTATATTAACATCAGGG+TGG | - | chr7_4:57079649-57079668 | Msa1165230:intron | 35.0% | |
| ! | AGGAAATTTGCAATCCCTTT+TGG | - | chr7_4:57079794-57079813 | Msa1165230:intron | 35.0% |
| ! | GGAAATTTGCAATCCCTTTT+GGG | - | chr7_4:57079795-57079814 | Msa1165230:intron | 35.0% |
| AACGATGATAACAATGGATC+AGG | + | chr7_4:57079858-57079877 | None:intergenic | 35.0% | |
| ACTGGAAAATTCATCAGCTA+CGG | + | chr7_4:57079889-57079908 | None:intergenic | 35.0% | |
| TGGTGAAAACAACTTATGCA+AGG | + | chr7_4:57080222-57080241 | None:intergenic | 35.0% | |
| ACACATGATTGGTAGAAAGA+CGG | + | chr7_4:57080299-57080318 | None:intergenic | 35.0% | |
| ATCATCAGCAAAAATGAACC+TGG | - | chr7_4:57080544-57080563 | Msa1165230:intron | 35.0% | |
| ATTATGATAGGTGACACCAA+TGG | - | chr7_4:57080568-57080587 | Msa1165230:intron | 35.0% | |
| TGATTGGAGTTCCTAACTTA+GGG | - | chr7_4:57080678-57080697 | Msa1165230:intron | 35.0% | |
| CACATCGAAGTGAACAAAAT+GGG | + | chr7_4:57080722-57080741 | None:intergenic | 35.0% | |
| ACACATCGAAGTGAACAAAA+TGG | + | chr7_4:57080723-57080742 | None:intergenic | 35.0% | |
| !! | GCACAACATTTATTTTCGGT+TGG | + | chr7_4:57080883-57080902 | None:intergenic | 35.0% |
| TATACTGTCTTCATCTTTGG+AGG | + | chr7_4:57081036-57081055 | None:intergenic | 35.0% | |
| !! | GATATGAAAACCTAGCTTTG+GGG | + | chr7_4:57081129-57081148 | None:intergenic | 35.0% |
| ! | TTTTTGTGATATGCTGAGGT+AGG | - | chr7_4:57081153-57081172 | Msa1165230:intron | 35.0% |
| ! | CTTTTATTAGGAATGGGTGA+TGG | + | chr7_4:57081400-57081419 | None:intergenic | 35.0% |
| CATCACCCATTCCTAATAAA+AGG | - | chr7_4:57081398-57081417 | Msa1165230:intron | 35.0% | |
| GTGAATTCATTAGAGAGATG+AGG | - | chr7_4:57081649-57081668 | Msa1165230:intron | 35.0% | |
| ATTCATTAGAGAGATGAGGT+TGG | - | chr7_4:57081653-57081672 | Msa1165230:intron | 35.0% | |
| ! | GTTAAAAGCAGTAAAAGCAC+GGG | + | chr7_4:57081694-57081713 | None:intergenic | 35.0% |
| ! | CTTTTAACAGTACATCTTGC+CGG | - | chr7_4:57081706-57081725 | Msa1165230:intron | 35.0% |
| CCATCTCAAGTAATTTCATC+CGG | + | chr7_4:57081728-57081747 | None:intergenic | 35.0% | |
| !!! | ACTAGCTTTTTTTGTGTAGG+TGG | - | chr7_4:57081791-57081810 | Msa1165230:intron | 35.0% |
| !!! | CTAGCTTTTTTTGTGTAGGT+GGG | - | chr7_4:57081792-57081811 | Msa1165230:intron | 35.0% |
| !!! | TAGCTTTTTTTGTGTAGGTG+GGG | - | chr7_4:57081793-57081812 | Msa1165230:intron | 35.0% |
| !!! | ATTGTCTTTTTTCAGAGAGG+TGG | - | chr7_4:57081945-57081964 | Msa1165230:exon | 35.0% |
| CATCATAAGGATGGAATTAG+AGG | + | chr7_4:57081993-57082012 | None:intergenic | 35.0% | |
| CTATGACAACATCATAAGGA+TGG | + | chr7_4:57082002-57082021 | None:intergenic | 35.0% | |
| TGCACTATGACAACATCATA+AGG | + | chr7_4:57082006-57082025 | None:intergenic | 35.0% | |
| ! | GATGTTGTCATAGTGCATTT+TGG | - | chr7_4:57082009-57082028 | Msa1165230:five_prime_UTR | 35.0% |
| AAGGTGCAATTGTTGAATGT+TGG | + | chr7_4:57082050-57082069 | None:intergenic | 35.0% | |
| AATGCATTGCTTGATGTATG+CGG | + | chr7_4:57082204-57082223 | None:intergenic | 35.0% | |
| AGTCAAGGATAAGGAAGAAA+AGG | - | chr7_4:57082299-57082318 | Msa1165230:five_prime_UTR | 35.0% | |
| GATCGTTGTGAAATAAGATG+TGG | - | chr7_4:57082493-57082512 | Msa1165230:five_prime_UTR | 35.0% | |
| ACATTTACATTTGTGGGTGT+TGG | - | chr7_4:57082641-57082660 | Msa1165230:five_prime_UTR | 35.0% | |
| CATTTACATTTGTGGGTGTT+GGG | - | chr7_4:57082642-57082661 | Msa1165230:five_prime_UTR | 35.0% | |
| TGAAAAGACACCATTAACCT+CGG | - | chr7_4:57082685-57082704 | Msa1165230:five_prime_UTR | 35.0% | |
| ! | AGTGTTGAGTTATGCTAATG+AGG | - | chr7_4:57082711-57082730 | Msa1165230:five_prime_UTR | 35.0% |
| GTGTTGAGTTATGCTAATGA+GGG | - | chr7_4:57082712-57082731 | Msa1165230:five_prime_UTR | 35.0% | |
| !! | CCGGTCTTTCAAGTTAATCT+TGG | - | chr7_4:57079113-57079132 | Msa1165230:three_prime_UTR | 40.0% |
| ! | AAGCATACAAGAGCATGTGA+GGG | + | chr7_4:57079199-57079218 | None:intergenic | 40.0% |
| ! | AAAGCATACAAGAGCATGTG+AGG | + | chr7_4:57079200-57079219 | None:intergenic | 40.0% |
| TATTAACATCAGGGTGGTAG+TGG | - | chr7_4:57079655-57079674 | Msa1165230:intron | 40.0% | |
| CGAAAGAGGAAATCAAGGAA+AGG | - | chr7_4:57079726-57079745 | Msa1165230:intron | 40.0% | |
| AAGAGGAAATCAAGGAAAGG+TGG | - | chr7_4:57079729-57079748 | Msa1165230:intron | 40.0% | |
| ! | AATTTGCAATCCCTTTTGGG+CGG | - | chr7_4:57079798-57079817 | Msa1165230:intron | 40.0% |
| CTGGAAAATTCATCAGCTAC+GGG | + | chr7_4:57079888-57079907 | None:intergenic | 40.0% | |
| TAAGAACACTAACGTAGGTC+TGG | - | chr7_4:57080130-57080149 | Msa1165230:intron | 40.0% | |
| AAGAACACTAACGTAGGTCT+GGG | - | chr7_4:57080131-57080150 | Msa1165230:intron | 40.0% | |
| GGTGTATCATCAAATGAGGT+GGG | + | chr7_4:57080259-57080278 | None:intergenic | 40.0% | |
| TGGTGTATCATCAAATGAGG+TGG | + | chr7_4:57080260-57080279 | None:intergenic | 40.0% | |
| GGATGGTGTATCATCAAATG+AGG | + | chr7_4:57080263-57080282 | None:intergenic | 40.0% | |
| ! | AAAGACGGGAAAATTTGGTG+TGG | + | chr7_4:57080284-57080303 | None:intergenic | 40.0% |
| GGTAGAAAGACGGGAAAATT+TGG | + | chr7_4:57080289-57080308 | None:intergenic | 40.0% | |
| CACATGATTGGTAGAAAGAC+GGG | + | chr7_4:57080298-57080317 | None:intergenic | 40.0% | |
| ACACGATAAGGACACATGAT+TGG | + | chr7_4:57080310-57080329 | None:intergenic | 40.0% | |
| TGGTGAAGGAAAGGGAATTA+AGG | - | chr7_4:57080360-57080379 | Msa1165230:intron | 40.0% | |
| GGTGAAGGAAAGGGAATTAA+GGG | - | chr7_4:57080361-57080380 | Msa1165230:intron | 40.0% | |
| GTGAAGGAAAGGGAATTAAG+GGG | - | chr7_4:57080362-57080381 | Msa1165230:intron | 40.0% | |
| TGAAGGAAAGGGAATTAAGG+GGG | - | chr7_4:57080363-57080382 | Msa1165230:intron | 40.0% | |
| ! | TACACCAAAAGCACATCCTT+TGG | - | chr7_4:57080391-57080410 | Msa1165230:intron | 40.0% |
| TGTTTCCTTTGTGTTGCCAA+AGG | + | chr7_4:57080410-57080429 | None:intergenic | 40.0% | |
| GTGTCACCTATCATAATTCC+AGG | + | chr7_4:57080565-57080584 | None:intergenic | 40.0% | |
| GTGATTGGAGTTCCTAACTT+AGG | - | chr7_4:57080677-57080696 | Msa1165230:intron | 40.0% | |
| AATGGGCAAGTAAGAGCAAT+GGG | + | chr7_4:57080705-57080724 | None:intergenic | 40.0% | |
| AAATGGGCAAGTAAGAGCAA+TGG | + | chr7_4:57080706-57080725 | None:intergenic | 40.0% | |
| !!! | GAGTTTTAGATTCCCAGTGT+TGG | - | chr7_4:57080766-57080785 | Msa1165230:intron | 40.0% |
| CCACCGTGCAATAGTTAAAT+AGG | + | chr7_4:57080917-57080936 | None:intergenic | 40.0% | |
| CCTATTTAACTATTGCACGG+TGG | - | chr7_4:57080914-57080933 | Msa1165230:intron | 40.0% | |
| TCTCCTTACCACTAATGCAA+TGG | - | chr7_4:57080940-57080959 | Msa1165230:intron | 40.0% | |
| TGACCATTGCATTAGTGGTA+AGG | + | chr7_4:57080946-57080965 | None:intergenic | 40.0% | |
| TCTGGAGATTCGTTAGATTC+CGG | - | chr7_4:57081471-57081490 | Msa1165230:intron | 40.0% | |
| ! | AGATTCGTGCTTTTAGCACT+TGG | - | chr7_4:57081560-57081579 | Msa1165230:intron | 40.0% |
| CCGGATGAAATTACTTGAGA+TGG | - | chr7_4:57081725-57081744 | Msa1165230:intron | 40.0% | |
| ! | GTTGCTGCTTGAAAGTTGAA+AGG | - | chr7_4:57081891-57081910 | Msa1165230:CDS | 40.0% |
| CTTGAAAGTTGAAAGGACGA+GGG | - | chr7_4:57081898-57081917 | Msa1165230:CDS | 40.0% | |
| TTATCCTTGACTGACAAGGT+AGG | + | chr7_4:57082291-57082310 | None:intergenic | 40.0% | |
| TACCTTGTCAGTCAAGGATA+AGG | - | chr7_4:57082290-57082309 | Msa1165230:five_prime_UTR | 40.0% | |
| TTCCTTATCCTTGACTGACA+AGG | + | chr7_4:57082295-57082314 | None:intergenic | 40.0% | |
| AATTCATCTGTGATGACTGC+TGG | - | chr7_4:57082387-57082406 | Msa1165230:five_prime_UTR | 40.0% | |
| AGGGCATACCATAGATTGTA+GGG | + | chr7_4:57082452-57082471 | None:intergenic | 40.0% | |
| TAGGGCATACCATAGATTGT+AGG | + | chr7_4:57082453-57082472 | None:intergenic | 40.0% | |
| GAAAAGACACCATTAACCTC+GGG | - | chr7_4:57082686-57082705 | Msa1165230:five_prime_UTR | 40.0% | |
| ! | TACAAGAGCATGTGAGGGTT+GGG | + | chr7_4:57079194-57079213 | None:intergenic | 45.0% |
| ! | ATACAAGAGCATGTGAGGGT+TGG | + | chr7_4:57079195-57079214 | None:intergenic | 45.0% |
| CACACTCTAACGCACTTTCT+TGG | - | chr7_4:57079563-57079582 | Msa1165230:intron | 45.0% | |
| TGCAGCGAAAGAGGAAATCA+AGG | - | chr7_4:57079721-57079740 | Msa1165230:intron | 45.0% | |
| ! | ATTTGCAATCCCTTTTGGGC+GGG | - | chr7_4:57079799-57079818 | Msa1165230:intron | 45.0% |
| TTTCCAGTTCTCAGAGTCAG+AGG | - | chr7_4:57079901-57079920 | Msa1165230:intron | 45.0% | |
| !! | AGTCTCGTCTGAGCTTTTTC+TGG | + | chr7_4:57079931-57079950 | None:intergenic | 45.0% |
| AGAACACTAACGTAGGTCTG+GGG | - | chr7_4:57080132-57080151 | Msa1165230:intron | 45.0% | |
| !! | ACGGGAAAATTTGGTGTGGA+TGG | + | chr7_4:57080280-57080299 | None:intergenic | 45.0% |
| ! | GTTGCCAAAGGATGTGCTTT+TGG | + | chr7_4:57080398-57080417 | None:intergenic | 45.0% |
| CACATCCTTTGGCAACACAA+AGG | - | chr7_4:57080402-57080421 | Msa1165230:intron | 45.0% | |
| ATGATAGGTGACACCAATGG+AGG | - | chr7_4:57080571-57080590 | Msa1165230:intron | 45.0% | |
| TCTCTTCTCTCAACCTCCAT+TGG | + | chr7_4:57080587-57080606 | None:intergenic | 45.0% | |
| CACAGTGACCATTGCATTAG+TGG | + | chr7_4:57080951-57080970 | None:intergenic | 45.0% | |
| CTCTATATGTTCAGGGACAG+TGG | + | chr7_4:57081072-57081091 | None:intergenic | 45.0% | |
| TTGCTTACATCCCCAAAGCT+AGG | - | chr7_4:57081116-57081135 | Msa1165230:intron | 45.0% | |
| GGAATCTAACGAATCTCCAG+AGG | + | chr7_4:57081472-57081491 | None:intergenic | 45.0% | |
| CGCTAACACTGCAGAATCAT+TGG | + | chr7_4:57081516-57081535 | None:intergenic | 45.0% | |
| AAAGCACGAATCTGATCCTC+TGG | + | chr7_4:57081553-57081572 | None:intergenic | 45.0% | |
| CTATCTCTCTCTTGGACTGA+TGG | + | chr7_4:57081593-57081612 | None:intergenic | 45.0% | |
| ! | TTTTTGTGTAGGTGGGGATG+TGG | - | chr7_4:57081799-57081818 | Msa1165230:intron | 45.0% |
| GCTTGAAAGTTGAAAGGACG+AGG | - | chr7_4:57081897-57081916 | Msa1165230:CDS | 45.0% | |
| ! | GAGTTGTTGTTCCTTGCCAA+CGG | - | chr7_4:57082166-57082185 | Msa1165230:five_prime_UTR | 45.0% |
| CATGCGATCCCTACAATCTA+TGG | - | chr7_4:57082441-57082460 | Msa1165230:five_prime_UTR | 45.0% | |
| GTGAATACGTGCAGCGAAAG+AGG | - | chr7_4:57079712-57079731 | Msa1165230:intron | 50.0% | |
| ! | TTGCCTCTGACTCTGAGAAC+TGG | + | chr7_4:57079907-57079926 | None:intergenic | 50.0% |
| GGTGGGACTTACAGATTCAG+TGG | + | chr7_4:57080242-57080261 | None:intergenic | 50.0% | |
| ! | AGTAGTGGGAGCACACGATA+AGG | + | chr7_4:57080322-57080341 | None:intergenic | 50.0% |
| GTTGAGAGAAGAGACGTGAG+TGG | - | chr7_4:57080593-57080612 | Msa1165230:intron | 50.0% | |
| GTCACCTTCCCACTCAAACA+CGG | + | chr7_4:57080625-57080644 | None:intergenic | 50.0% | |
| ! | CTGAGCATGAGAGGTGTGAT+TGG | - | chr7_4:57080662-57080681 | Msa1165230:intron | 50.0% |
| GAGCAATGGGACCCTAAGTT+AGG | + | chr7_4:57080692-57080711 | None:intergenic | 50.0% | |
| TGTCCATGTTGCAGCAACAG+AGG | - | chr7_4:57080740-57080759 | Msa1165230:intron | 50.0% | |
| TACAAGACGGCACCAACACT+GGG | + | chr7_4:57080781-57080800 | None:intergenic | 50.0% | |
| CAGTACCCACCACTACAAGA+CGG | + | chr7_4:57080794-57080813 | None:intergenic | 50.0% | |
| !! | GTAGTGGTGGGTACTGTAAC+AGG | - | chr7_4:57080798-57080817 | Msa1165230:intron | 50.0% |
| ! | TGGTGGGTACTGTAACAGGA+GGG | - | chr7_4:57080802-57080821 | Msa1165230:intron | 50.0% |
| GTACTGTAACAGGAGGGAGA+GGG | - | chr7_4:57080808-57080827 | Msa1165230:intron | 50.0% | |
| TACTGTAACAGGAGGGAGAG+GGG | - | chr7_4:57080809-57080828 | Msa1165230:intron | 50.0% | |
| GGGGGGAAATTTAGCGTGTA+AGG | - | chr7_4:57080829-57080848 | Msa1165230:intron | 50.0% | |
| ! | TCCGGATCTGAAACCCTCTT+TGG | - | chr7_4:57081429-57081448 | Msa1165230:intron | 50.0% |
| GCCAAAGAGGGTTTCAGATC+CGG | + | chr7_4:57081433-57081452 | None:intergenic | 50.0% | |
| GTTAGATTCCGGTGCAGTGT+TGG | - | chr7_4:57081482-57081501 | Msa1165230:intron | 50.0% | |
| ATCCAAGTCCAACACTGCAC+CGG | + | chr7_4:57081493-57081512 | None:intergenic | 50.0% | |
| TCTCTCTTGGACTGATGGAG+AGG | + | chr7_4:57081588-57081607 | None:intergenic | 50.0% | |
| AGAGATGAGGTTGGACAGTG+AGG | - | chr7_4:57081662-57081681 | Msa1165230:intron | 50.0% | |
| GTGTGAGAGGGAACAGGATA+GGG | + | chr7_4:57081761-57081780 | None:intergenic | 50.0% | |
| TGTGTGAGAGGGAACAGGAT+AGG | + | chr7_4:57081762-57081781 | None:intergenic | 50.0% | |
| !! | GTCATAGTGGGTGTGTGAGA+GGG | + | chr7_4:57081773-57081792 | None:intergenic | 50.0% |
| !! | AGTCATAGTGGGTGTGTGAG+AGG | + | chr7_4:57081774-57081793 | None:intergenic | 50.0% |
| CTGAAAACATGCCGTTGGCA+AGG | + | chr7_4:57082180-57082199 | None:intergenic | 50.0% | |
| CAACACTCTCCCGAGGTTAA+TGG | + | chr7_4:57082698-57082717 | None:intergenic | 50.0% | |
| CATAACTCAACACTCTCCCG+AGG | + | chr7_4:57082705-57082724 | None:intergenic | 50.0% | |
| TTGAGGAAGGAGCTGCGAGA+AGG | - | chr7_4:57079774-57079793 | Msa1165230:intron | 55.0% | |
| ACGTGAAGACCCGCCCAAAA+GGG | + | chr7_4:57079811-57079830 | None:intergenic | 55.0% | |
| TACGTGAAGACCCGCCCAAA+AGG | + | chr7_4:57079812-57079831 | None:intergenic | 55.0% | |
| GAGAGAAGAGACGTGAGTGG+AGG | - | chr7_4:57080596-57080615 | Msa1165230:intron | 55.0% | |
| TGGAGGTGACCGTGTTTGAG+TGG | - | chr7_4:57080613-57080632 | Msa1165230:intron | 55.0% | |
| GGAGGTGACCGTGTTTGAGT+GGG | - | chr7_4:57080614-57080633 | Msa1165230:intron | 55.0% | |
| GTGACCGTGTTTGAGTGGGA+AGG | - | chr7_4:57080618-57080637 | Msa1165230:intron | 55.0% | |
| AGTGGGAAGGTGACTCACTG+AGG | - | chr7_4:57080631-57080650 | Msa1165230:intron | 55.0% | |
| GTGGGAAGGTGACTCACTGA+GGG | - | chr7_4:57080632-57080651 | Msa1165230:intron | 55.0% | |
| CTGCCTCTGTTGCTGCAACA+TGG | + | chr7_4:57080746-57080765 | None:intergenic | 55.0% | |
| CATGTTGCAGCAACAGAGGC+AGG | - | chr7_4:57080744-57080763 | Msa1165230:intron | 55.0% | |
| CTACAAGACGGCACCAACAC+TGG | + | chr7_4:57080782-57080801 | None:intergenic | 55.0% | |
| !! | GTGTTGGTGCCGTCTTGTAG+TGG | - | chr7_4:57080782-57080801 | Msa1165230:intron | 55.0% |
| !! | TTGGTGCCGTCTTGTAGTGG+TGG | - | chr7_4:57080785-57080804 | Msa1165230:intron | 55.0% |
| !! | TGGTGCCGTCTTGTAGTGGT+GGG | - | chr7_4:57080786-57080805 | Msa1165230:intron | 55.0% |
| !! | GTGGTGGGTACTGTAACAGG+AGG | - | chr7_4:57080801-57080820 | Msa1165230:intron | 55.0% |
| GGTACTGTAACAGGAGGGAG+AGG | - | chr7_4:57080807-57080826 | Msa1165230:intron | 55.0% | |
| ACTGTAACAGGAGGGAGAGG+GGG | - | chr7_4:57080810-57080829 | Msa1165230:intron | 55.0% | |
| ACAGTGTGCAGCGCCAAAGA+GGG | + | chr7_4:57081445-57081464 | None:intergenic | 55.0% | |
| TACAGTGTGCAGCGCCAAAG+AGG | + | chr7_4:57081446-57081465 | None:intergenic | 55.0% | |
| ! | TTCCGGTGCAGTGTTGGACT+TGG | - | chr7_4:57081488-57081507 | Msa1165230:intron | 55.0% |
| TGAGAGGGAACAGGATAGGG+AGG | + | chr7_4:57081758-57081777 | None:intergenic | 55.0% | |
| GTGGGGATGTGGTCTCATGT+CGG | - | chr7_4:57081810-57081829 | Msa1165230:intron | 55.0% | |
| GCGGTCTGAAAACATGCCGT+TGG | + | chr7_4:57082185-57082204 | None:intergenic | 55.0% | |
| GACGCCTACCTTGTCAGTCA+AGG | - | chr7_4:57082284-57082303 | Msa1165230:five_prime_UTR | 55.0% | |
| ! | ATGACTGCTGGTTGCTGCAG+TGG | - | chr7_4:57082399-57082418 | Msa1165230:five_prime_UTR | 55.0% |
| ! | GGTGACTCACTGAGGGTGTG+AGG | - | chr7_4:57080639-57080658 | Msa1165230:intron | 60.0% |
| GGTGTGAGGCTGAGCATGAG+AGG | - | chr7_4:57080653-57080672 | Msa1165230:intron | 60.0% | |
| CTGTAACAGGAGGGAGAGGG+GGG | - | chr7_4:57080811-57080830 | Msa1165230:intron | 60.0% | |
| TGTAACAGGAGGGAGAGGGG+GGG | - | chr7_4:57080812-57080831 | Msa1165230:intron | 60.0% | |
| GCTGCACACTGTACAGCCTC+TGG | - | chr7_4:57081453-57081472 | Msa1165230:intron | 60.0% | |
| GTGGGTGTGTGAGAGGGAAC+AGG | + | chr7_4:57081767-57081786 | None:intergenic | 60.0% | |
| CGATGTGCGCAGCACTCCAG+AGG | - | chr7_4:57081534-57081553 | Msa1165230:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 57079063 | 57082780 | 57079063 | ID=Msa1165230;Name=Msa1165230 |
| chr7_4 | mRNA | 57079063 | 57082780 | 57079063 | ID=Msa1165230-mRNA-1;Parent=Msa1165230;Name=Msa1165230-mRNA-1;_AED=0.15;_eAED=0.15;_QI=832|1|1|1|1|1|2|381|63 |
| chr7_4 | exon | 57079063 | 57079568 | 57079063 | ID=Msa1165230-mRNA-1:exon:17149;Parent=Msa1165230-mRNA-1 |
| chr7_4 | exon | 57081882 | 57082780 | 57081882 | ID=Msa1165230-mRNA-1:exon:17148;Parent=Msa1165230-mRNA-1 |
| chr7_4 | five_prime_UTR | 57081949 | 57082780 | 57081949 | ID=Msa1165230-mRNA-1:five_prime_utr;Parent=Msa1165230-mRNA-1 |
| chr7_4 | CDS | 57081882 | 57081948 | 57081882 | ID=Msa1165230-mRNA-1:cds;Parent=Msa1165230-mRNA-1 |
| chr7_4 | CDS | 57079444 | 57079568 | 57079444 | ID=Msa1165230-mRNA-1:cds;Parent=Msa1165230-mRNA-1 |
| chr7_4 | three_prime_UTR | 57079063 | 57079443 | 57079063 | ID=Msa1165230-mRNA-1:three_prime_utr;Parent=Msa1165230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
