AlfalfaGEDB | Msa0531530

M. sativa cultivar zhongmu-4 / Msa0531530

KEGG: -
GO: -
PFAM: PF09072.13

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0531530	AES86666.1	100.000	64	0	0	1	64	1	64	3.86e-33	118

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0531530	G7JJD0	100.000	64	0	0	1	64	1	64	1.84e-33	118

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001450	Msa0531530	0.834232	3.376942e-56	-8.615850e-47
Msa0020390	Msa0531530	0.843289	1.535971e-58	-8.615850e-47
Msa0020410	Msa0531530	0.816874	4.416376e-52	-8.615850e-47
Msa0043980	Msa0531530	0.820059	8.378076e-53	-8.615850e-47
Msa0044000	Msa0531530	0.829134	6.102435e-55	-8.615850e-47
Msa0054230	Msa0531530	0.800727	1.258087e-48	-8.615850e-47
Msa0056470	Msa0531530	0.824417	8.165702e-54	-8.615850e-47
Msa0072420	Msa0531530	0.851849	6.788869e-61	-8.615850e-47
Msa0090520	Msa0531530	0.819241	1.287697e-52	-8.615850e-47
Msa0090550	Msa0531530	0.813762	2.172561e-51	-8.615850e-47
Msa0090570	Msa0531530	0.813107	3.026390e-51	-8.615850e-47
Msa0101500	Msa0531530	-0.801056	1.077888e-48	-8.615850e-47
Msa0108760	Msa0531530	0.804399	2.201205e-49	-8.615850e-47
Msa0121870	Msa0531530	0.816210	6.219166e-52	-8.615850e-47
Msa0123560	Msa0531530	0.824754	6.799990e-54	-8.615850e-47
Msa0127800	Msa0531530	0.822485	2.310177e-53	-8.615850e-47
Msa0137990	Msa0531530	0.820853	5.506099e-53	-8.615850e-47
Msa0140110	Msa0531530	0.811490	6.822809e-51	-8.615850e-47
Msa0140650	Msa0531530	0.830125	3.502814e-55	-8.615850e-47
Msa0140820	Msa0531530	0.822943	1.807012e-53	-8.615850e-47
Msa0146000	Msa0531530	0.812588	3.931172e-51	-8.615850e-47
Msa0148080	Msa0531530	0.803879	2.824192e-49	-8.615850e-47
Msa0183900	Msa0531530	0.808045	3.756441e-50	-8.615850e-47
Msa0191070	Msa0531530	0.808231	3.427873e-50	-8.615850e-47
Msa0194950	Msa0531530	-0.834977	2.193338e-56	-8.615850e-47
Msa0204960	Msa0531530	0.846400	2.223846e-59	-8.615850e-47
Msa0207670	Msa0531530	0.806283	8.868825e-50	-8.615850e-47
Msa0209350	Msa0531530	0.843640	1.237666e-58	-8.615850e-47
Msa0217670	Msa0531530	0.818429	1.969230e-52	-8.615850e-47
Msa0232790	Msa0531530	0.817311	3.522473e-52	-8.615850e-47
Msa0233370	Msa0531530	0.807508	4.883776e-50	-8.615850e-47
Msa0233630	Msa0531530	-0.816022	6.849452e-52	-8.615850e-47
Msa0380300	Msa0531530	0.832101	1.145741e-55	-8.615850e-47
Msa0385500	Msa0531530	0.864960	8.347540e-65	-8.615850e-47
Msa0385740	Msa0531530	0.811799	5.842374e-51	-8.615850e-47
Msa0386800	Msa0531530	0.833846	4.217290e-56	-8.615850e-47
Msa0387820	Msa0531530	0.864567	1.108267e-64	-8.615850e-47
Msa0388700	Msa0531530	0.808210	3.464279e-50	-8.615850e-47
Msa0398670	Msa0531530	0.830459	2.901439e-55	-8.615850e-47
Msa0415430	Msa0531530	0.805950	1.041958e-49	-8.615850e-47
Msa0462600	Msa0531530	0.805026	1.628236e-49	-8.615850e-47
Msa0467380	Msa0531530	0.809610	1.738129e-50	-8.615850e-47
Msa0240920	Msa0531530	0.811852	5.690175e-51	-8.615850e-47
Msa0257490	Msa0531530	0.855888	4.662640e-62	-8.615850e-47
Msa0261550	Msa0531530	0.811791	5.865703e-51	-8.615850e-47
Msa0272300	Msa0531530	0.866028	3.846357e-65	-8.615850e-47
Msa0274040	Msa0531530	-0.830334	3.114608e-55	-8.615850e-47
Msa0281530	Msa0531530	0.854457	1.215273e-61	-8.615850e-47
Msa0296790	Msa0531530	0.813409	2.597500e-51	-8.615850e-47
Msa0305410	Msa0531530	0.802239	6.165805e-49	-8.615850e-47
Msa0315440	Msa0531530	-0.839960	1.159309e-57	-8.615850e-47
Msa0317910	Msa0531530	0.801264	9.771816e-49	-8.615850e-47
Msa0317960	Msa0531530	0.802909	4.484239e-49	-8.615850e-47
Msa0320590	Msa0531530	0.817157	3.814255e-52	-8.615850e-47
Msa0326480	Msa0531530	0.812275	4.600661e-51	-8.615850e-47
Msa0496450	Msa0531530	0.809267	2.058933e-50	-8.615850e-47
Msa0497210	Msa0531530	0.806549	7.794031e-50	-8.615850e-47
Msa0512340	Msa0531530	0.886136	4.445206e-72	-8.615850e-47
Msa0521050	Msa0531530	0.820748	5.821835e-53	-8.615850e-47
Msa0524500	Msa0531530	0.808017	3.807350e-50	-8.615850e-47
Msa0527540	Msa0531530	0.834332	3.186041e-56	-8.615850e-47
Msa0530560	Msa0531530	0.841698	4.059106e-58	-8.615850e-47
Msa0531530	Msa0531690	0.832021	1.198664e-55	-8.615850e-47
Msa0531530	Msa0542260	0.819808	9.561653e-53	-8.615850e-47
Msa0531530	Msa0542290	0.829019	6.505189e-55	-8.615850e-47
Msa0531530	Msa0542560	0.816192	6.275862e-52	-8.615850e-47
Msa0531530	Msa0547160	0.837960	3.819154e-57	-8.615850e-47
Msa0531530	Msa0548240	0.853743	1.952831e-61	-8.615850e-47
Msa0531530	Msa0556060	0.821243	4.478830e-53	-8.615850e-47
Msa0531530	Msa0581110	0.827574	1.451172e-54	-8.615850e-47
Msa0531530	Msa0588260	0.958706	1.211015e-116	-8.615850e-47
Msa0531530	Msa0588360	0.804671	1.931632e-49	-8.615850e-47
Msa0531530	Msa0604290	0.843064	1.762824e-58	-8.615850e-47
Msa0531530	Msa0610550	0.804298	2.310209e-49	-8.615850e-47
Msa0531530	Msa0628710	0.804682	1.921137e-49	-8.615850e-47
Msa0531530	Msa0647500	0.800259	1.567130e-48	-8.615850e-47
Msa0531530	Msa0649220	0.806773	6.990616e-50	-8.615850e-47
Msa0531530	Msa0650050	-0.803556	3.294734e-49	-8.615850e-47
Msa0531530	Msa0651050	0.813861	2.065630e-51	-8.615850e-47
Msa0531530	Msa0661300	0.819862	9.293362e-53	-8.615850e-47
Msa0531530	Msa0665860	0.829162	6.007808e-55	-8.615850e-47
Msa0531530	Msa0666270	0.830750	2.462586e-55	-8.615850e-47
Msa0531530	Msa0677530	0.834434	3.004263e-56	-8.615850e-47
Msa0531530	Msa0682680	0.824429	8.110184e-54	-8.615850e-47
Msa0531530	Msa0685090	0.800749	1.245494e-48	-8.615850e-47
Msa0531530	Msa0698540	0.804607	1.992180e-49	-8.615850e-47
Msa0531530	Msa0698780	0.804631	1.969407e-49	-8.615850e-47
Msa0531530	Msa0709400	0.821964	3.050592e-53	-8.615850e-47
Msa0531530	Msa0722020	0.803924	2.764082e-49	-8.615850e-47
Msa0531530	Msa0765080	0.843162	1.659723e-58	-8.615850e-47
Msa0531530	Msa0776560	0.816041	6.783245e-52	-8.615850e-47
Msa0531530	Msa0800370	0.817152	3.824216e-52	-8.615850e-47
Msa0531530	Msa0828590	0.806603	7.592847e-50	-8.615850e-47
Msa0531530	Msa0933380	0.815363	9.608489e-52	-8.615850e-47
Msa0531530	Msa0944680	0.813408	2.599156e-51	-8.615850e-47
Msa0531530	Msa0958000	0.815413	9.364990e-52	-8.615850e-47
Msa0531530	Msa1021520	0.809235	2.091614e-50	-8.615850e-47
Msa0531530	Msa1029050	0.820376	7.086424e-53	-8.615850e-47
Msa0531530	Msa1031660	0.825735	3.985620e-54	-8.615850e-47
Msa0531530	Msa1059300	0.812739	3.643441e-51	-8.615850e-47
Msa0531530	Msa1059470	0.802534	5.361442e-49	-8.615850e-47
Msa0531530	Msa1070720	0.818385	2.015040e-52	-8.615850e-47
Msa0531530	Msa1081930	0.828672	7.891635e-55	-8.615850e-47
Msa0531530	Msa1089460	0.807386	5.185599e-50	-8.615850e-47
Msa0531530	Msa1109680	0.825783	3.882772e-54	-8.615850e-47
Msa0531530	Msa1117240	0.826823	2.195137e-54	-8.615850e-47
Msa0531530	Msa1124960	0.805874	1.081438e-49	-8.615850e-47
Msa0531530	Msa1126830	0.823847	1.110877e-53	-8.615850e-47
Msa0531530	Msa1128280	0.822530	2.255109e-53	-8.615850e-47
Msa0531530	Msa1148910	0.813968	1.956381e-51	-8.615850e-47
Msa0531530	Msa1150710	0.809852	1.541512e-50	-8.615850e-47
Msa0531530	Msa1158640	-0.828296	9.729507e-55	-8.615850e-47
Msa0531530	Msa1165230	0.842635	2.293096e-58	-8.615850e-47
Msa0531530	Msa1165270	0.811973	5.354756e-51	-8.615850e-47
Msa0531530	Msa1165940	0.836389	9.630244e-57	-8.615850e-47
Msa0531530	Msa1228040	0.801263	9.779653e-49	-8.615850e-47
Msa0531530	Msa1238390	0.801713	7.908475e-49	-8.615850e-47
Msa0531530	Msa1239910	0.804444	2.153827e-49	-8.615850e-47
Msa0531530	Msa1244600	0.840634	7.725063e-58	-8.615850e-47
Msa0531530	Msa1254730	0.835017	2.143091e-56	-8.615850e-47
Msa0531530	Msa1269790	0.805554	1.262342e-49	-8.615850e-47
Msa0531530	Msa1294820	0.823175	1.595959e-53	-8.615850e-47
Msa0531530	Msa1296830	0.817500	3.193807e-52	-8.615850e-47
Msa0531530	Msa1305660	0.818570	1.829446e-52	-8.615850e-47
Msa0531530	Msa1305700	0.805021	1.632192e-49	-8.615850e-47
Msa0531530	Msa1336560	0.816061	6.713321e-52	-8.615850e-47
Msa0531530	Msa1341060	0.851620	7.884383e-61	-8.615850e-47
Msa0531530	Msa1342890	0.826783	2.244335e-54	-8.615850e-47
Msa0531530	Msa1357620	0.807330	5.329498e-50	-8.615850e-47
Msa0531530	Msa1361520	0.803251	3.810377e-49	-8.615850e-47
Msa0531530	Msa1365800	0.834963	2.211306e-56	-8.615850e-47
Msa0531530	Msa1368530	0.831468	1.641039e-55	-8.615850e-47
Msa0531530	Msa1385770	0.808304	3.307155e-50	-8.615850e-47
Msa0531530	Msa1392980	0.818905	1.535546e-52	-8.615850e-47
Msa0531530	Msa1409240	0.808272	3.360741e-50	-8.615850e-47
Msa0531530	Msa1419870	0.802206	6.262967e-49	-8.615850e-47
Msa0531530	Msa1434420	-0.856943	2.284732e-62	-8.615850e-47
Msa0531530	Msa1435390	0.806220	9.143891e-50	-8.615850e-47
Msa0531530	Msa1451560	0.824241	8.981657e-54	-8.615850e-47
Msa0531530	Msa1457620	0.826966	2.029782e-54	-8.615850e-47
Msa0531530	Msa1462290	0.805736	1.155697e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0531530	MtrunA17_Chr4g0004541	100.000	64	0	0	1	64	1	64	3.55e-37	118

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0531530	AT1G15270.1	89.062	64	7	0	1	64	1	64	1.12e-33	109
Msa0531530	AT3G16040.1	84.375	64	10	0	1	64	1	64	3.79e-29	98.2

Find 39 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGCTTGGTCGACATGGTTT+TGG	0.243730	4_1:-5711190	None:intergenic
TCTATTATGTTCTCACCTTA+TGG	0.251637	4_1:+5713111	Msa0531530:three_prime_UTR
GCCTCACAGAAGGGATCTTT+TGG	0.287259	4_1:+5712786	Msa0531530:CDS
AGCTTCTTTGTGTCTCCCTT+TGG	0.293265	4_1:+5713001	Msa0531530:three_prime_UTR
TTGGGTGAAGAGTTAGGGTT+TGG	0.304226	4_1:-5711171	None:intergenic
GCTTCTTTGTGTCTCCCTTT+GGG	0.319835	4_1:+5713002	Msa0531530:three_prime_UTR
GGCTAACATCCAGAAGAAAA+AGG	0.357013	4_1:+5712636	Msa0531530:CDS
TCTGTTTAGTGTTGTGGCTT+TGG	0.357724	4_1:+5713034	Msa0531530:three_prime_UTR
TACTAACATCAGCAATTAAA+AGG	0.358102	4_1:-5712928	None:intergenic
TACATCATCACGATAAGCTT+TGG	0.387023	4_1:-5712956	None:intergenic
GAAAAGTGGAAAGAAATAGA+AGG	0.393132	4_1:+5712824	Msa0531530:exon
AATACATCTGTTTAGTGTTG+TGG	0.400431	4_1:+5713028	Msa0531530:three_prime_UTR
TAATCCTTCTTATCAGACTT+TGG	0.404695	4_1:-5711435	None:intergenic
GCTTTGGCATATACTTCTCT+TGG	0.414931	4_1:+5713050	Msa0531530:three_prime_UTR
AGATTGAAGGTTACCTTGCT+TGG	0.431112	4_1:-5711205	None:intergenic
TGGGTGAAGAGTTAGGGTTT+GGG	0.436696	4_1:-5711170	None:intergenic
CAAGGTAAGTTGTTACCATA+AGG	0.478549	4_1:-5713126	None:intergenic
AAAATAATTTAGTGAGGGTA+AGG	0.485824	4_1:+5711099	Msa0531530:five_prime_UTR
TCAGACTTTGGCTTCTTCAA+AGG	0.486773	4_1:-5711423	None:intergenic
TATAGGTTGCTTATAGAAAA+CGG	0.491126	4_1:+5711030	None:intergenic
GAAGCCAAAGTCTGATAAGA+AGG	0.504619	4_1:+5711431	Msa0531530:CDS
ATGGATTGAACAGGCGCTAA+AGG	0.513359	4_1:+5712749	Msa0531530:intron
GTTACCTTGCTTGGTCGACA+TGG	0.525919	4_1:-5711196	None:intergenic
ACAGATGTATTAAGCCCAAA+GGG	0.527031	4_1:-5713016	None:intergenic
GCTAAAGGAGCTGAAGGCTA+AGG	0.540771	4_1:+5712764	Msa0531530:CDS
GGATCTGGACTCAAGAAAAG+TGG	0.544869	4_1:+5712810	Msa0531530:CDS
CACAATAAGAGATGTTCTCA+TGG	0.546443	4_1:-5712902	None:intergenic
GAAGGCTAAGGCCTCACAGA+AGG	0.551780	4_1:+5712776	Msa0531530:CDS
AAAAGTGGAAAGAAATAGAA+GGG	0.572493	4_1:+5712825	Msa0531530:exon
AACAGATGTATTAAGCCCAA+AGG	0.577766	4_1:-5713017	None:intergenic
CAAGAATCTCATCTCTCACA+AGG	0.581904	4_1:-5713144	None:intergenic
AAAACCATGTCGACCAAGCA+AGG	0.588270	4_1:+5711192	Msa0531530:exon
TACCCGAAAATAATTTAGTG+AGG	0.592271	4_1:+5711093	Msa0531530:five_prime_UTR
ACCCGAAAATAATTTAGTGA+GGG	0.609648	4_1:+5711094	Msa0531530:five_prime_UTR
AAGGCTAAGGCCTCACAGAA+GGG	0.624637	4_1:+5712777	Msa0531530:CDS
ACAGGCGCTAAAGGAGCTGA+AGG	0.640092	4_1:+5712758	Msa0531530:intron
TCCAAAAGATCCCTTCTGTG+AGG	0.701774	4_1:-5712787	None:intergenic
TGATAAGAAGGATTACGATG+AGG	0.705327	4_1:+5711443	Msa0531530:CDS
AGGTTGCTTATAGAAAACGG+TGG	0.768300	4_1:+5711033	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTTTTGATTGATTTTTT+TGG	+	chr4_1:5711365-5711384	Msa0531530:intron	10.0%
!!!	AGGTATTTTAATTTTTTTTT+TGG	+	chr4_1:5711463-5711482	Msa0531530:intron	10.0%
!!	AAAAAATTGATTAATTCAAA+AGG	-	chr4_1:5711627-5711646	None:intergenic	10.0%
!!!	AATTTTTTGATTGATTTTTT+TGG	+	chr4_1:5711365-5711384	Msa0531530:intron	10.0%
!!!	AGGTATTTTAATTTTTTTTT+TGG	+	chr4_1:5711463-5711482	Msa0531530:intron	10.0%
!!	AAAAAATTGATTAATTCAAA+AGG	-	chr4_1:5711627-5711646	None:intergenic	10.0%
!!!	TTTTTTTTTGGATATTATGT+TGG	+	chr4_1:5711475-5711494	Msa0531530:intron	15.0%
!!	ATAGTAATTAAAAACAAAAG+AGG	+	chr4_1:5711707-5711726	Msa0531530:intron	15.0%
!!!	TTTTTTTTTGGATATTATGT+TGG	+	chr4_1:5711475-5711494	Msa0531530:intron	15.0%
!!	ATAGTAATTAAAAACAAAAG+AGG	+	chr4_1:5711707-5711726	Msa0531530:intron	15.0%
!!!	AGAATTGAAATTTTCAAGTT+TGG	+	chr4_1:5711542-5711561	Msa0531530:intron	20.0%
!!	GAATTCTATTAATTCAAACA+TGG	-	chr4_1:5711896-5711915	None:intergenic	20.0%
!!	CTAATCAAAGCTATTAATTT+GGG	-	chr4_1:5711954-5711973	None:intergenic	20.0%
!!	TCTAATCAAAGCTATTAATT+TGG	-	chr4_1:5711955-5711974	None:intergenic	20.0%
!!!	TAATTGTATCTGTATTTTGT+AGG	+	chr4_1:5712606-5712625	Msa0531530:intron	20.0%
!!!	AGAATTGAAATTTTCAAGTT+TGG	+	chr4_1:5711542-5711561	Msa0531530:intron	20.0%
!!	GAATTCTATTAATTCAAACA+TGG	-	chr4_1:5711896-5711915	None:intergenic	20.0%
!!	CTAATCAAAGCTATTAATTT+GGG	-	chr4_1:5711954-5711973	None:intergenic	20.0%
!!	TCTAATCAAAGCTATTAATT+TGG	-	chr4_1:5711955-5711974	None:intergenic	20.0%
!!!	TAATTGTATCTGTATTTTGT+AGG	+	chr4_1:5712606-5712625	Msa0531530:intron	20.0%
!!	TACCCTCACTAAATTATTTT+CGG	-	chr4_1:5711099-5711118	None:intergenic	25.0%
!	AAAATAATTTAGTGAGGGTA+AGG	+	chr4_1:5711099-5711118	Msa0531530:five_prime_UTR	25.0%
!	ACATGAATCAATAGAGTTAT+AGG	-	chr4_1:5711231-5711250	None:intergenic	25.0%
!!	ACGAACAGATCTATATTTTA+GGG	-	chr4_1:5711330-5711349	None:intergenic	25.0%
!!!	GTTTGCTTTTTGTGATTTTT+AGG	+	chr4_1:5711387-5711406	Msa0531530:intron	25.0%
!	ACTGTATATTTGAATTGTGT+TGG	+	chr4_1:5711515-5711534	Msa0531530:intron	25.0%
!!!	TTATTGGGTGTTTTTGTTTT+AGG	+	chr4_1:5711591-5711610	Msa0531530:intron	25.0%
!!!	TATTGGGTGTTTTTGTTTTA+GGG	+	chr4_1:5711592-5711611	Msa0531530:intron	25.0%
!	TTTCATATGTGTCTTCTTTA+AGG	+	chr4_1:5711790-5711809	Msa0531530:intron	25.0%
!!!	TCGAATTCTGTTTTTTTCAA+CGG	-	chr4_1:5711855-5711874	None:intergenic	25.0%
!!	AGCTTTGATTAGAAAGTATA+AGG	+	chr4_1:5711962-5711981	Msa0531530:intron	25.0%
!!	GCTTTGATTAGAAAGTATAA+GGG	+	chr4_1:5711963-5711982	Msa0531530:intron	25.0%
!!	CTTTGATTAGAAAGTATAAG+GGG	+	chr4_1:5711964-5711983	Msa0531530:intron	25.0%
!	AATCAAAAGGATAGAAGAAA+TGG	-	chr4_1:5712194-5712213	None:intergenic	25.0%
!	ATTGATATTCACACTGAATT+CGG	-	chr4_1:5712218-5712237	None:intergenic	25.0%
!	TCATATTCTTCAATCCTTTA+AGG	+	chr4_1:5712244-5712263	Msa0531530:intron	25.0%
!	TGATAGAATATGTTCTACAA+TGG	-	chr4_1:5712477-5712496	None:intergenic	25.0%
!!	TTTTTGTTGCATTTTACTTG+AGG	+	chr4_1:5712561-5712580	Msa0531530:intron	25.0%
!	ACAGATACAATTATATCACA+AGG	-	chr4_1:5712599-5712618	None:intergenic	25.0%
!	AAAAGTGGAAAGAAATAGAA+GGG	+	chr4_1:5712825-5712844	Msa0531530:exon	25.0%
!	TACTAACATCAGCAATTAAA+AGG	-	chr4_1:5712931-5712950	None:intergenic	25.0%
!!	TACCCTCACTAAATTATTTT+CGG	-	chr4_1:5711099-5711118	None:intergenic	25.0%
!	AAAATAATTTAGTGAGGGTA+AGG	+	chr4_1:5711099-5711118	Msa0531530:five_prime_UTR	25.0%
!	ACATGAATCAATAGAGTTAT+AGG	-	chr4_1:5711231-5711250	None:intergenic	25.0%
!!	ACGAACAGATCTATATTTTA+GGG	-	chr4_1:5711330-5711349	None:intergenic	25.0%
!!!	GTTTGCTTTTTGTGATTTTT+AGG	+	chr4_1:5711387-5711406	Msa0531530:intron	25.0%
!	ACTGTATATTTGAATTGTGT+TGG	+	chr4_1:5711515-5711534	Msa0531530:intron	25.0%
!!!	TTATTGGGTGTTTTTGTTTT+AGG	+	chr4_1:5711591-5711610	Msa0531530:intron	25.0%
!!!	TATTGGGTGTTTTTGTTTTA+GGG	+	chr4_1:5711592-5711611	Msa0531530:intron	25.0%
!	TTTCATATGTGTCTTCTTTA+AGG	+	chr4_1:5711790-5711809	Msa0531530:intron	25.0%
!!!	TCGAATTCTGTTTTTTTCAA+CGG	-	chr4_1:5711855-5711874	None:intergenic	25.0%
!!	AGCTTTGATTAGAAAGTATA+AGG	+	chr4_1:5711962-5711981	Msa0531530:intron	25.0%
!!	GCTTTGATTAGAAAGTATAA+GGG	+	chr4_1:5711963-5711982	Msa0531530:intron	25.0%
!!	CTTTGATTAGAAAGTATAAG+GGG	+	chr4_1:5711964-5711983	Msa0531530:intron	25.0%
!	AATCAAAAGGATAGAAGAAA+TGG	-	chr4_1:5712194-5712213	None:intergenic	25.0%
!	ATTGATATTCACACTGAATT+CGG	-	chr4_1:5712218-5712237	None:intergenic	25.0%
!	TCATATTCTTCAATCCTTTA+AGG	+	chr4_1:5712244-5712263	Msa0531530:intron	25.0%
!	TGATAGAATATGTTCTACAA+TGG	-	chr4_1:5712477-5712496	None:intergenic	25.0%
!!	TTTTTGTTGCATTTTACTTG+AGG	+	chr4_1:5712561-5712580	Msa0531530:intron	25.0%
!	ACAGATACAATTATATCACA+AGG	-	chr4_1:5712599-5712618	None:intergenic	25.0%
!	AAAAGTGGAAAGAAATAGAA+GGG	+	chr4_1:5712825-5712844	Msa0531530:exon	25.0%
!	TACTAACATCAGCAATTAAA+AGG	-	chr4_1:5712931-5712950	None:intergenic	25.0%
	TACCCGAAAATAATTTAGTG+AGG	+	chr4_1:5711093-5711112	Msa0531530:five_prime_UTR	30.0%
	ACCCGAAAATAATTTAGTGA+GGG	+	chr4_1:5711094-5711113	Msa0531530:five_prime_UTR	30.0%
!	ACCCTCACTAAATTATTTTC+GGG	-	chr4_1:5711098-5711117	None:intergenic	30.0%
	ATAGAGTTATAGGAGATTGA+AGG	-	chr4_1:5711221-5711240	None:intergenic	30.0%
!	CACGAACAGATCTATATTTT+AGG	-	chr4_1:5711331-5711350	None:intergenic	30.0%
!!	TGCTTTTTGTGATTTTTAGG+TGG	+	chr4_1:5711390-5711409	Msa0531530:intron	30.0%
	TAATCCTTCTTATCAGACTT+TGG	-	chr4_1:5711438-5711457	None:intergenic	30.0%
!!	TTTGAGCTTGGTTGTTTTAT+TGG	+	chr4_1:5711575-5711594	Msa0531530:intron	30.0%
!!	TTGAGCTTGGTTGTTTTATT+GGG	+	chr4_1:5711576-5711595	Msa0531530:intron	30.0%
	TATGAAAAATCAGCAAACAG+TGG	-	chr4_1:5711777-5711796	None:intergenic	30.0%
!!	AAAGTATAAGGGGAGTATTT+GGG	+	chr4_1:5711974-5711993	Msa0531530:intron	30.0%
	GGATATTAATGACAGACAAT+AGG	+	chr4_1:5711996-5712015	Msa0531530:intron	30.0%
	GGTAAGAAGGAAATATACAT+AGG	+	chr4_1:5712048-5712067	Msa0531530:intron	30.0%
	ACCATACCTAGAAATTAGAA+TGG	+	chr4_1:5712272-5712291	Msa0531530:intron	30.0%
	CCATACCTAGAAATTAGAAT+GGG	+	chr4_1:5712273-5712292	Msa0531530:intron	30.0%
	GTGGAATATTGTGTTAAGAA+TGG	+	chr4_1:5712329-5712348	Msa0531530:intron	30.0%
!	AAGGCTAATCTGAAATATGT+TGG	-	chr4_1:5712375-5712394	None:intergenic	30.0%
!!!	CATATTTCAGATTAGCCTTT+TGG	+	chr4_1:5712376-5712395	Msa0531530:intron	30.0%
	TTGAGATTTCTGCTGTTAAT+TGG	+	chr4_1:5712526-5712545	Msa0531530:intron	30.0%
	CAACAGAATCAGGTAAAAAT+AGG	-	chr4_1:5712728-5712747	None:intergenic	30.0%
	GAAAAGTGGAAAGAAATAGA+AGG	+	chr4_1:5712824-5712843	Msa0531530:exon	30.0%
	AATACATCTGTTTAGTGTTG+TGG	+	chr4_1:5713028-5713047	Msa0531530:three_prime_UTR	30.0%
	TCTATTATGTTCTCACCTTA+TGG	+	chr4_1:5713111-5713130	Msa0531530:three_prime_UTR	30.0%
	TACCCGAAAATAATTTAGTG+AGG	+	chr4_1:5711093-5711112	Msa0531530:five_prime_UTR	30.0%
	ACCCGAAAATAATTTAGTGA+GGG	+	chr4_1:5711094-5711113	Msa0531530:five_prime_UTR	30.0%
!	ACCCTCACTAAATTATTTTC+GGG	-	chr4_1:5711098-5711117	None:intergenic	30.0%
	ATAGAGTTATAGGAGATTGA+AGG	-	chr4_1:5711221-5711240	None:intergenic	30.0%
!	CACGAACAGATCTATATTTT+AGG	-	chr4_1:5711331-5711350	None:intergenic	30.0%
!!	TGCTTTTTGTGATTTTTAGG+TGG	+	chr4_1:5711390-5711409	Msa0531530:intron	30.0%
	TAATCCTTCTTATCAGACTT+TGG	-	chr4_1:5711438-5711457	None:intergenic	30.0%
!!	TTTGAGCTTGGTTGTTTTAT+TGG	+	chr4_1:5711575-5711594	Msa0531530:intron	30.0%
!!	TTGAGCTTGGTTGTTTTATT+GGG	+	chr4_1:5711576-5711595	Msa0531530:intron	30.0%
	TATGAAAAATCAGCAAACAG+TGG	-	chr4_1:5711777-5711796	None:intergenic	30.0%
!!	AAAGTATAAGGGGAGTATTT+GGG	+	chr4_1:5711974-5711993	Msa0531530:intron	30.0%
	GGATATTAATGACAGACAAT+AGG	+	chr4_1:5711996-5712015	Msa0531530:intron	30.0%
	GGTAAGAAGGAAATATACAT+AGG	+	chr4_1:5712048-5712067	Msa0531530:intron	30.0%
	ACCATACCTAGAAATTAGAA+TGG	+	chr4_1:5712272-5712291	Msa0531530:intron	30.0%
	CCATACCTAGAAATTAGAAT+GGG	+	chr4_1:5712273-5712292	Msa0531530:intron	30.0%
	GTGGAATATTGTGTTAAGAA+TGG	+	chr4_1:5712329-5712348	Msa0531530:intron	30.0%
!	AAGGCTAATCTGAAATATGT+TGG	-	chr4_1:5712375-5712394	None:intergenic	30.0%
!!!	CATATTTCAGATTAGCCTTT+TGG	+	chr4_1:5712376-5712395	Msa0531530:intron	30.0%
	TTGAGATTTCTGCTGTTAAT+TGG	+	chr4_1:5712526-5712545	Msa0531530:intron	30.0%
	CAACAGAATCAGGTAAAAAT+AGG	-	chr4_1:5712728-5712747	None:intergenic	30.0%
	GAAAAGTGGAAAGAAATAGA+AGG	+	chr4_1:5712824-5712843	Msa0531530:exon	30.0%
	AATACATCTGTTTAGTGTTG+TGG	+	chr4_1:5713028-5713047	Msa0531530:three_prime_UTR	30.0%
	TCTATTATGTTCTCACCTTA+TGG	+	chr4_1:5713111-5713130	Msa0531530:three_prime_UTR	30.0%
	TGATAAGAAGGATTACGATG+AGG	+	chr4_1:5711443-5711462	Msa0531530:CDS	35.0%
	AAAAATCAGCAAACAGTGGT+AGG	-	chr4_1:5711773-5711792	None:intergenic	35.0%
!!	GAAAGTATAAGGGGAGTATT+TGG	+	chr4_1:5711973-5711992	Msa0531530:intron	35.0%
!!	AAGTATAAGGGGAGTATTTG+GGG	+	chr4_1:5711975-5711994	Msa0531530:intron	35.0%
	TGACAGACAATAGGATATTC+AGG	+	chr4_1:5712005-5712024	Msa0531530:intron	35.0%
	CAGGTTTGCATAACAGAATT+AGG	+	chr4_1:5712024-5712043	Msa0531530:intron	35.0%
	GTTTGCATAACAGAATTAGG+AGG	+	chr4_1:5712027-5712046	Msa0531530:intron	35.0%
	AACAGAATTAGGAGGTAAGA+AGG	+	chr4_1:5712035-5712054	Msa0531530:intron	35.0%
	TTTGAAAGTCATGTCTCATG+AGG	+	chr4_1:5712141-5712160	Msa0531530:intron	35.0%
	TTGAAAGTCATGTCTCATGA+GGG	+	chr4_1:5712142-5712161	Msa0531530:intron	35.0%
	CACTGAATTCGGTAATCAAA+AGG	-	chr4_1:5712207-5712226	None:intergenic	35.0%
!	CCCATTCTAATTTCTAGGTA+TGG	-	chr4_1:5712276-5712295	None:intergenic	35.0%
!	TAAGGTTTGAGACCCTTATT+GGG	+	chr4_1:5712434-5712453	Msa0531530:intron	35.0%
	GAAATCTTCCTACCCAATAA+GGG	-	chr4_1:5712449-5712468	None:intergenic	35.0%
	TGAAATCTTCCTACCCAATA+AGG	-	chr4_1:5712450-5712469	None:intergenic	35.0%
	TTATTGGGTAGGAAGATTTC+AGG	+	chr4_1:5712449-5712468	Msa0531530:intron	35.0%
	TATTGGGTAGGAAGATTTCA+GGG	+	chr4_1:5712450-5712469	Msa0531530:intron	35.0%
!!	CTGTATTTTGTAGGTTGACA+TGG	+	chr4_1:5712615-5712634	Msa0531530:intron	35.0%
!	TTTTACCTGATTCTGTTGCA+TGG	+	chr4_1:5712730-5712749	Msa0531530:intron	35.0%
	CACAATAAGAGATGTTCTCA+TGG	-	chr4_1:5712905-5712924	None:intergenic	35.0%
	TACATCATCACGATAAGCTT+TGG	-	chr4_1:5712959-5712978	None:intergenic	35.0%
	ACAGATGTATTAAGCCCAAA+GGG	-	chr4_1:5713019-5713038	None:intergenic	35.0%
	AACAGATGTATTAAGCCCAA+AGG	-	chr4_1:5713020-5713039	None:intergenic	35.0%
	CAAGGTAAGTTGTTACCATA+AGG	-	chr4_1:5713129-5713148	None:intergenic	35.0%
!!!	GATTCTTGAATGCCGTTTTT+TGG	+	chr4_1:5713159-5713178	Msa0531530:three_prime_UTR	35.0%
	CCAAAGCTAATGCCAAAAAA+CGG	-	chr4_1:5713174-5713193	None:intergenic	35.0%
	TGATAAGAAGGATTACGATG+AGG	+	chr4_1:5711443-5711462	Msa0531530:CDS	35.0%
	AAAAATCAGCAAACAGTGGT+AGG	-	chr4_1:5711773-5711792	None:intergenic	35.0%
!!	GAAAGTATAAGGGGAGTATT+TGG	+	chr4_1:5711973-5711992	Msa0531530:intron	35.0%
!!	AAGTATAAGGGGAGTATTTG+GGG	+	chr4_1:5711975-5711994	Msa0531530:intron	35.0%
	TGACAGACAATAGGATATTC+AGG	+	chr4_1:5712005-5712024	Msa0531530:intron	35.0%
	CAGGTTTGCATAACAGAATT+AGG	+	chr4_1:5712024-5712043	Msa0531530:intron	35.0%
	GTTTGCATAACAGAATTAGG+AGG	+	chr4_1:5712027-5712046	Msa0531530:intron	35.0%
	AACAGAATTAGGAGGTAAGA+AGG	+	chr4_1:5712035-5712054	Msa0531530:intron	35.0%
	TTTGAAAGTCATGTCTCATG+AGG	+	chr4_1:5712141-5712160	Msa0531530:intron	35.0%
	TTGAAAGTCATGTCTCATGA+GGG	+	chr4_1:5712142-5712161	Msa0531530:intron	35.0%
	CACTGAATTCGGTAATCAAA+AGG	-	chr4_1:5712207-5712226	None:intergenic	35.0%
!	CCCATTCTAATTTCTAGGTA+TGG	-	chr4_1:5712276-5712295	None:intergenic	35.0%
!	TAAGGTTTGAGACCCTTATT+GGG	+	chr4_1:5712434-5712453	Msa0531530:intron	35.0%
	GAAATCTTCCTACCCAATAA+GGG	-	chr4_1:5712449-5712468	None:intergenic	35.0%
	TGAAATCTTCCTACCCAATA+AGG	-	chr4_1:5712450-5712469	None:intergenic	35.0%
	TTATTGGGTAGGAAGATTTC+AGG	+	chr4_1:5712449-5712468	Msa0531530:intron	35.0%
	TATTGGGTAGGAAGATTTCA+GGG	+	chr4_1:5712450-5712469	Msa0531530:intron	35.0%
!!	CTGTATTTTGTAGGTTGACA+TGG	+	chr4_1:5712615-5712634	Msa0531530:intron	35.0%
!	TTTTACCTGATTCTGTTGCA+TGG	+	chr4_1:5712730-5712749	Msa0531530:intron	35.0%
	CACAATAAGAGATGTTCTCA+TGG	-	chr4_1:5712905-5712924	None:intergenic	35.0%
	TACATCATCACGATAAGCTT+TGG	-	chr4_1:5712959-5712978	None:intergenic	35.0%
	ACAGATGTATTAAGCCCAAA+GGG	-	chr4_1:5713019-5713038	None:intergenic	35.0%
	AACAGATGTATTAAGCCCAA+AGG	-	chr4_1:5713020-5713039	None:intergenic	35.0%
	CAAGGTAAGTTGTTACCATA+AGG	-	chr4_1:5713129-5713148	None:intergenic	35.0%
!!!	GATTCTTGAATGCCGTTTTT+TGG	+	chr4_1:5713159-5713178	Msa0531530:three_prime_UTR	35.0%
	CCAAAGCTAATGCCAAAAAA+CGG	-	chr4_1:5713174-5713193	None:intergenic	35.0%
!!!	TGGTTTTGGGTGAAGAGTTA+GGG	-	chr4_1:5711179-5711198	None:intergenic	40.0%
!!!	ATGGTTTTGGGTGAAGAGTT+AGG	-	chr4_1:5711180-5711199	None:intergenic	40.0%
	AGATTGAAGGTTACCTTGCT+TGG	-	chr4_1:5711208-5711227	None:intergenic	40.0%
!	TCAGACTTTGGCTTCTTCAA+AGG	-	chr4_1:5711426-5711445	None:intergenic	40.0%
	GAAGCCAAAGTCTGATAAGA+AGG	+	chr4_1:5711431-5711450	Msa0531530:CDS	40.0%
	ATGTAGAGTAGAGAGTCTAG+AGG	+	chr4_1:5712107-5712126	Msa0531530:intron	40.0%
	TGTAGAGTAGAGAGTCTAGA+GGG	+	chr4_1:5712108-5712127	Msa0531530:intron	40.0%
	AGGTATGGTAGTTGCCTTAA+AGG	-	chr4_1:5712261-5712280	None:intergenic	40.0%
	CCACTCCCATTCTAATTTCT+AGG	-	chr4_1:5712281-5712300	None:intergenic	40.0%
	CCTAGAAATTAGAATGGGAG+TGG	+	chr4_1:5712278-5712297	Msa0531530:intron	40.0%
!!!	TTCAGATTAGCCTTTTGGAG+TGG	+	chr4_1:5712381-5712400	Msa0531530:intron	40.0%
!!!	TCAGATTAGCCTTTTGGAGT+GGG	+	chr4_1:5712382-5712401	Msa0531530:intron	40.0%
!	GTAAGGTTTGAGACCCTTAT+TGG	+	chr4_1:5712433-5712452	Msa0531530:intron	40.0%
	GGCTAACATCCAGAAGAAAA+AGG	+	chr4_1:5712636-5712655	Msa0531530:CDS	40.0%
	CATCCAGAAGAAAAAGGATG+AGG	+	chr4_1:5712642-5712661	Msa0531530:CDS	40.0%
!	TCTCCTCATCCTTTTTCTTC+TGG	-	chr4_1:5712648-5712667	None:intergenic	40.0%
	GAAGAAAAAGGATGAGGAGA+AGG	+	chr4_1:5712648-5712667	Msa0531530:CDS	40.0%
	TCAATCCATGCAACAGAATC+AGG	-	chr4_1:5712738-5712757	None:intergenic	40.0%
!	TTCTGTTGCATGGATTGAAC+AGG	+	chr4_1:5712740-5712759	Msa0531530:intron	40.0%
	TCTGTTTAGTGTTGTGGCTT+TGG	+	chr4_1:5713034-5713053	Msa0531530:three_prime_UTR	40.0%
	GCTTTGGCATATACTTCTCT+TGG	+	chr4_1:5713050-5713069	Msa0531530:three_prime_UTR	40.0%
	CAAGAATCTCATCTCTCACA+AGG	-	chr4_1:5713147-5713166	None:intergenic	40.0%
!!!	CCGTTTTTTGGCATTAGCTT+TGG	+	chr4_1:5713171-5713190	Msa0531530:three_prime_UTR	40.0%
!!!	TGGTTTTGGGTGAAGAGTTA+GGG	-	chr4_1:5711179-5711198	None:intergenic	40.0%
!!!	ATGGTTTTGGGTGAAGAGTT+AGG	-	chr4_1:5711180-5711199	None:intergenic	40.0%
	AGATTGAAGGTTACCTTGCT+TGG	-	chr4_1:5711208-5711227	None:intergenic	40.0%
!	TCAGACTTTGGCTTCTTCAA+AGG	-	chr4_1:5711426-5711445	None:intergenic	40.0%
	GAAGCCAAAGTCTGATAAGA+AGG	+	chr4_1:5711431-5711450	Msa0531530:CDS	40.0%
	ATGTAGAGTAGAGAGTCTAG+AGG	+	chr4_1:5712107-5712126	Msa0531530:intron	40.0%
	TGTAGAGTAGAGAGTCTAGA+GGG	+	chr4_1:5712108-5712127	Msa0531530:intron	40.0%
	AGGTATGGTAGTTGCCTTAA+AGG	-	chr4_1:5712261-5712280	None:intergenic	40.0%
	CCACTCCCATTCTAATTTCT+AGG	-	chr4_1:5712281-5712300	None:intergenic	40.0%
	CCTAGAAATTAGAATGGGAG+TGG	+	chr4_1:5712278-5712297	Msa0531530:intron	40.0%
!!!	TTCAGATTAGCCTTTTGGAG+TGG	+	chr4_1:5712381-5712400	Msa0531530:intron	40.0%
!!!	TCAGATTAGCCTTTTGGAGT+GGG	+	chr4_1:5712382-5712401	Msa0531530:intron	40.0%
!	GTAAGGTTTGAGACCCTTAT+TGG	+	chr4_1:5712433-5712452	Msa0531530:intron	40.0%
	GGCTAACATCCAGAAGAAAA+AGG	+	chr4_1:5712636-5712655	Msa0531530:CDS	40.0%
	CATCCAGAAGAAAAAGGATG+AGG	+	chr4_1:5712642-5712661	Msa0531530:CDS	40.0%
!	TCTCCTCATCCTTTTTCTTC+TGG	-	chr4_1:5712648-5712667	None:intergenic	40.0%
	GAAGAAAAAGGATGAGGAGA+AGG	+	chr4_1:5712648-5712667	Msa0531530:CDS	40.0%
	TCAATCCATGCAACAGAATC+AGG	-	chr4_1:5712738-5712757	None:intergenic	40.0%
!	TTCTGTTGCATGGATTGAAC+AGG	+	chr4_1:5712740-5712759	Msa0531530:intron	40.0%
	TCTGTTTAGTGTTGTGGCTT+TGG	+	chr4_1:5713034-5713053	Msa0531530:three_prime_UTR	40.0%
	GCTTTGGCATATACTTCTCT+TGG	+	chr4_1:5713050-5713069	Msa0531530:three_prime_UTR	40.0%
	CAAGAATCTCATCTCTCACA+AGG	-	chr4_1:5713147-5713166	None:intergenic	40.0%
!!!	CCGTTTTTTGGCATTAGCTT+TGG	+	chr4_1:5713171-5713190	Msa0531530:three_prime_UTR	40.0%
	TGGGTGAAGAGTTAGGGTTT+GGG	-	chr4_1:5711173-5711192	None:intergenic	45.0%
	TTGGGTGAAGAGTTAGGGTT+TGG	-	chr4_1:5711174-5711193	None:intergenic	45.0%
!	TGCTTGGTCGACATGGTTTT+GGG	-	chr4_1:5711192-5711211	None:intergenic	45.0%
!	TTGCTTGGTCGACATGGTTT+TGG	-	chr4_1:5711193-5711212	None:intergenic	45.0%
	AAAACCATGTCGACCAAGCA+AGG	+	chr4_1:5711192-5711211	Msa0531530:exon	45.0%
!!!	GGTGCAGTTTTGTTTGAGCT+TGG	+	chr4_1:5711563-5711582	Msa0531530:intron	45.0%
	ATTGAGGACTTGAGAGGATG+TGG	+	chr4_1:5712310-5712329	Msa0531530:intron	45.0%
!!!	CAGATTAGCCTTTTGGAGTG+GGG	+	chr4_1:5712383-5712402	Msa0531530:intron	45.0%
	TAGACGGTCGGTCATTCATT+TGG	+	chr4_1:5712411-5712430	Msa0531530:intron	45.0%
	GGTCGGTCATTCATTTGGTA+AGG	+	chr4_1:5712416-5712435	Msa0531530:intron	45.0%
!	GTTTGAGACCCTTATTGGGT+AGG	+	chr4_1:5712438-5712457	Msa0531530:intron	45.0%
!	ATGGATTGAACAGGCGCTAA+AGG	+	chr4_1:5712749-5712768	Msa0531530:intron	45.0%
	TCCAAAAGATCCCTTCTGTG+AGG	-	chr4_1:5712790-5712809	None:intergenic	45.0%
!	TCACAGAAGGGATCTTTTGG+AGG	+	chr4_1:5712789-5712808	Msa0531530:CDS	45.0%
!!	AAGGGATCTTTTGGAGGATC+TGG	+	chr4_1:5712795-5712814	Msa0531530:CDS	45.0%
	GGATCTGGACTCAAGAAAAG+TGG	+	chr4_1:5712810-5712829	Msa0531530:CDS	45.0%
	AGCTTCTTTGTGTCTCCCTT+TGG	+	chr4_1:5713001-5713020	Msa0531530:three_prime_UTR	45.0%
	GCTTCTTTGTGTCTCCCTTT+GGG	+	chr4_1:5713002-5713021	Msa0531530:three_prime_UTR	45.0%
	TGGGTGAAGAGTTAGGGTTT+GGG	-	chr4_1:5711173-5711192	None:intergenic	45.0%
	TTGGGTGAAGAGTTAGGGTT+TGG	-	chr4_1:5711174-5711193	None:intergenic	45.0%
!	TGCTTGGTCGACATGGTTTT+GGG	-	chr4_1:5711192-5711211	None:intergenic	45.0%
!	TTGCTTGGTCGACATGGTTT+TGG	-	chr4_1:5711193-5711212	None:intergenic	45.0%
	AAAACCATGTCGACCAAGCA+AGG	+	chr4_1:5711192-5711211	Msa0531530:exon	45.0%
!!!	GGTGCAGTTTTGTTTGAGCT+TGG	+	chr4_1:5711563-5711582	Msa0531530:intron	45.0%
	ATTGAGGACTTGAGAGGATG+TGG	+	chr4_1:5712310-5712329	Msa0531530:intron	45.0%
!!!	CAGATTAGCCTTTTGGAGTG+GGG	+	chr4_1:5712383-5712402	Msa0531530:intron	45.0%
	TAGACGGTCGGTCATTCATT+TGG	+	chr4_1:5712411-5712430	Msa0531530:intron	45.0%
	GGTCGGTCATTCATTTGGTA+AGG	+	chr4_1:5712416-5712435	Msa0531530:intron	45.0%
!	GTTTGAGACCCTTATTGGGT+AGG	+	chr4_1:5712438-5712457	Msa0531530:intron	45.0%
!	ATGGATTGAACAGGCGCTAA+AGG	+	chr4_1:5712749-5712768	Msa0531530:intron	45.0%
	TCCAAAAGATCCCTTCTGTG+AGG	-	chr4_1:5712790-5712809	None:intergenic	45.0%
!	TCACAGAAGGGATCTTTTGG+AGG	+	chr4_1:5712789-5712808	Msa0531530:CDS	45.0%
!!	AAGGGATCTTTTGGAGGATC+TGG	+	chr4_1:5712795-5712814	Msa0531530:CDS	45.0%
	GGATCTGGACTCAAGAAAAG+TGG	+	chr4_1:5712810-5712829	Msa0531530:CDS	45.0%
	AGCTTCTTTGTGTCTCCCTT+TGG	+	chr4_1:5713001-5713020	Msa0531530:three_prime_UTR	45.0%
	GCTTCTTTGTGTCTCCCTTT+GGG	+	chr4_1:5713002-5713021	Msa0531530:three_prime_UTR	45.0%
!!!	TTAATCAATTTTTTTAATTT+TGG	+	chr4_1:5711633-5711652	Msa0531530:intron	5.0%
!!!	TAATCAATTTTTTTAATTTT+GGG	+	chr4_1:5711634-5711653	Msa0531530:intron	5.0%
!!!	TTAATCAATTTTTTTAATTT+TGG	+	chr4_1:5711633-5711652	Msa0531530:intron	5.0%
!!!	TAATCAATTTTTTTAATTTT+GGG	+	chr4_1:5711634-5711653	Msa0531530:intron	5.0%
	GTTACCTTGCTTGGTCGACA+TGG	-	chr4_1:5711199-5711218	None:intergenic	50.0%
	ATTAGAATGGGAGTGGCTGC+AGG	+	chr4_1:5712285-5712304	Msa0531530:intron	50.0%
	TTAGAATGGGAGTGGCTGCA+GGG	+	chr4_1:5712286-5712305	Msa0531530:intron	50.0%
!!	CAGGGTATTGAGGACTTGAG+AGG	+	chr4_1:5712304-5712323	Msa0531530:intron	50.0%
	GCTAAAGGAGCTGAAGGCTA+AGG	+	chr4_1:5712764-5712783	Msa0531530:CDS	50.0%
	AAGGCTAAGGCCTCACAGAA+GGG	+	chr4_1:5712777-5712796	Msa0531530:CDS	50.0%
!	GCCTCACAGAAGGGATCTTT+TGG	+	chr4_1:5712786-5712805	Msa0531530:CDS	50.0%
	GTTACCTTGCTTGGTCGACA+TGG	-	chr4_1:5711199-5711218	None:intergenic	50.0%
	ATTAGAATGGGAGTGGCTGC+AGG	+	chr4_1:5712285-5712304	Msa0531530:intron	50.0%
	TTAGAATGGGAGTGGCTGCA+GGG	+	chr4_1:5712286-5712305	Msa0531530:intron	50.0%
!!	CAGGGTATTGAGGACTTGAG+AGG	+	chr4_1:5712304-5712323	Msa0531530:intron	50.0%
	GCTAAAGGAGCTGAAGGCTA+AGG	+	chr4_1:5712764-5712783	Msa0531530:CDS	50.0%
	AAGGCTAAGGCCTCACAGAA+GGG	+	chr4_1:5712777-5712796	Msa0531530:CDS	50.0%
!	GCCTCACAGAAGGGATCTTT+TGG	+	chr4_1:5712786-5712805	Msa0531530:CDS	50.0%
!!!	TAGCCTTTTGGAGTGGGGAG+AGG	+	chr4_1:5712388-5712407	Msa0531530:intron	55.0%
	CTACCTCTCCCCACTCCAAA+AGG	-	chr4_1:5712394-5712413	None:intergenic	55.0%
	TTGGAGTGGGGAGAGGTAGA+CGG	+	chr4_1:5712395-5712414	Msa0531530:intron	55.0%
	ACAGGCGCTAAAGGAGCTGA+AGG	+	chr4_1:5712758-5712777	Msa0531530:intron	55.0%
	GAAGGCTAAGGCCTCACAGA+AGG	+	chr4_1:5712776-5712795	Msa0531530:CDS	55.0%
!!!	TAGCCTTTTGGAGTGGGGAG+AGG	+	chr4_1:5712388-5712407	Msa0531530:intron	55.0%
	CTACCTCTCCCCACTCCAAA+AGG	-	chr4_1:5712394-5712413	None:intergenic	55.0%
	TTGGAGTGGGGAGAGGTAGA+CGG	+	chr4_1:5712395-5712414	Msa0531530:intron	55.0%
	ACAGGCGCTAAAGGAGCTGA+AGG	+	chr4_1:5712758-5712777	Msa0531530:intron	55.0%
	GAAGGCTAAGGCCTCACAGA+AGG	+	chr4_1:5712776-5712795	Msa0531530:CDS	55.0%
!!	GGAGTGGCTGCAGGGTATTG+AGG	+	chr4_1:5712294-5712313	Msa0531530:intron	60.0%
	AGTGGGGAGAGGTAGACGGT+CGG	+	chr4_1:5712399-5712418	Msa0531530:intron	60.0%
!!	GGAGTGGCTGCAGGGTATTG+AGG	+	chr4_1:5712294-5712313	Msa0531530:intron	60.0%
	AGTGGGGAGAGGTAGACGGT+CGG	+	chr4_1:5712399-5712418	Msa0531530:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	5711044	5713218	5711044	ID=Msa0531530;Name=Msa0531530
chr4_1	mRNA	5711044	5713218	5711044	ID=Msa0531530-mRNA-1;Parent=Msa0531530;Name=Msa0531530-mRNA-1;_AED=0.02;_eAED=0.02;_QI=154\|1\|1\|1\|1\|1\|4\|376\|64
chr4_1	exon	5711044	5711213	5711044	ID=Msa0531530-mRNA-1:exon:1861;Parent=Msa0531530-mRNA-1
chr4_1	exon	5711409	5711464	5711409	ID=Msa0531530-mRNA-1:exon:1862;Parent=Msa0531530-mRNA-1
chr4_1	exon	5712628	5712669	5712628	ID=Msa0531530-mRNA-1:exon:1863;Parent=Msa0531530-mRNA-1
chr4_1	exon	5712762	5713218	5712762	ID=Msa0531530-mRNA-1:exon:1864;Parent=Msa0531530-mRNA-1
chr4_1	five_prime_UTR	5711044	5711197	5711044	ID=Msa0531530-mRNA-1:five_prime_utr;Parent=Msa0531530-mRNA-1
chr4_1	CDS	5711198	5711213	5711198	ID=Msa0531530-mRNA-1:cds;Parent=Msa0531530-mRNA-1
chr4_1	CDS	5711409	5711464	5711409	ID=Msa0531530-mRNA-1:cds;Parent=Msa0531530-mRNA-1
chr4_1	CDS	5712628	5712669	5712628	ID=Msa0531530-mRNA-1:cds;Parent=Msa0531530-mRNA-1
chr4_1	CDS	5712762	5712842	5712762	ID=Msa0531530-mRNA-1:cds;Parent=Msa0531530-mRNA-1
chr4_1	three_prime_UTR	5712843	5713218	5712843	ID=Msa0531530-mRNA-1:three_prime_utr;Parent=Msa0531530-mRNA-1

Gene Sequence	>Msa0531530 ATGTCGACCAAGCAAGGTGGAAAAGCTAAGCCTTTGAAGAAGCCAAAGTCTGATAAGAAGGATTACGATGAGGTTGACATGGCTAACATCCAGAAGAAAAAGGATGAGGAGAAGGCGCTAAAGGAGCTGAAGGCTAAGGCCTCACAGAAGGGATCTTTTGGAGGATCTGGACTCAAGAAAAGTGGAAAGAAATAG
Protein sequence	>Msa0531530 MSTKQGGKAKPLKKPKSDKKDYDEVDMANIQKKKDEEKALKELKAKASQKGSFGGSGLKKSGKK*