Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0765080 | XP_003613550.1 | 98.157 | 217 | 2 | 1 | 3 | 217 | 217 | 433 | 3.76e-146 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0765080 | G7K9N7 | 98.157 | 217 | 2 | 1 | 3 | 217 | 217 | 433 | 1.80e-146 | 424 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0765080 | 0.818155 | 2.272258e-52 | -8.615850e-47 |
| Msa0006380 | Msa0765080 | 0.841783 | 3.854226e-58 | -8.615850e-47 |
| Msa0026710 | Msa0765080 | 0.805993 | 1.020876e-49 | -8.615850e-47 |
| Msa0027260 | Msa0765080 | 0.806964 | 6.368347e-50 | -8.615850e-47 |
| Msa0032430 | Msa0765080 | 0.807973 | 3.890436e-50 | -8.615850e-47 |
| Msa0044000 | Msa0765080 | 0.821082 | 4.878190e-53 | -8.615850e-47 |
| Msa0059110 | Msa0765080 | 0.811275 | 7.593634e-51 | -8.615850e-47 |
| Msa0072420 | Msa0765080 | 0.840455 | 8.609165e-58 | -8.615850e-47 |
| Msa0081780 | Msa0765080 | 0.805574 | 1.250176e-49 | -8.615850e-47 |
| Msa0090360 | Msa0765080 | 0.800409 | 1.461067e-48 | -8.615850e-47 |
| Msa0090570 | Msa0765080 | 0.805154 | 1.530520e-49 | -8.615850e-47 |
| Msa0100740 | Msa0765080 | 0.801984 | 6.955264e-49 | -8.615850e-47 |
| Msa0101500 | Msa0765080 | -0.818027 | 2.427848e-52 | -8.615850e-47 |
| Msa0610840 | Msa0765080 | -0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa0615710 | Msa0765080 | 0.822173 | 2.728514e-53 | -8.615850e-47 |
| Msa0631170 | Msa0765080 | 0.840133 | 1.044479e-57 | -8.615850e-47 |
| Msa0649050 | Msa0765080 | 0.800202 | 1.609671e-48 | -8.615850e-47 |
| Msa0665860 | Msa0765080 | 0.825697 | 4.070023e-54 | -8.615850e-47 |
| Msa0669520 | Msa0765080 | 0.810126 | 1.346164e-50 | -8.615850e-47 |
| Msa0690860 | Msa0765080 | 0.815849 | 7.489309e-52 | -8.615850e-47 |
| Msa0698540 | Msa0765080 | 0.821600 | 3.703361e-53 | -8.615850e-47 |
| Msa0707250 | Msa0765080 | 0.812040 | 5.179338e-51 | -8.615850e-47 |
| Msa0717230 | Msa0765080 | -0.813223 | 2.854287e-51 | -8.615850e-47 |
| Msa0756490 | Msa0765080 | 0.802886 | 4.535032e-49 | -8.615850e-47 |
| Msa0765080 | Msa0765910 | 0.805203 | 1.494980e-49 | -8.615850e-47 |
| Msa0765080 | Msa0799680 | -0.808974 | 2.378624e-50 | -8.615850e-47 |
| Msa0765080 | Msa0829330 | 0.811355 | 7.298427e-51 | -8.615850e-47 |
| Msa0765080 | Msa0832340 | 0.816841 | 4.491292e-52 | -8.615850e-47 |
| Msa0765080 | Msa0835490 | 0.814037 | 1.889483e-51 | -8.615850e-47 |
| Msa0765080 | Msa0945110 | 0.835193 | 1.935509e-56 | -8.615850e-47 |
| Msa0765080 | Msa0963270 | 0.802663 | 5.041081e-49 | -8.615850e-47 |
| Msa0765080 | Msa1021520 | 0.830720 | 2.504940e-55 | -8.615850e-47 |
| Msa0765080 | Msa1031660 | 0.842936 | 1.907254e-58 | -8.615850e-47 |
| Msa0765080 | Msa1044680 | 0.805067 | 1.596594e-49 | -8.615850e-47 |
| Msa0765080 | Msa1060230 | 0.845370 | 4.236554e-59 | -8.615850e-47 |
| Msa0765080 | Msa1070720 | 0.842572 | 2.383089e-58 | -8.615850e-47 |
| Msa0765080 | Msa1078170 | 0.804677 | 1.925781e-49 | -8.615850e-47 |
| Msa0765080 | Msa1081930 | 0.828079 | 1.097222e-54 | -8.615850e-47 |
| Msa0765080 | Msa1089450 | 0.805979 | 1.027445e-49 | -8.615850e-47 |
| Msa0765080 | Msa1102220 | 0.815670 | 8.209355e-52 | -8.615850e-47 |
| Msa0765080 | Msa1105460 | 0.831993 | 1.217708e-55 | -8.615850e-47 |
| Msa0765080 | Msa1109680 | 0.820534 | 6.518769e-53 | -8.615850e-47 |
| Msa0765080 | Msa1126830 | 0.808945 | 2.412822e-50 | -8.615850e-47 |
| Msa0765080 | Msa1128600 | 0.852174 | 5.489192e-61 | -8.615850e-47 |
| Msa0765080 | Msa1148910 | 0.858888 | 6.046122e-63 | -8.615850e-47 |
| Msa0765080 | Msa1155170 | -0.800022 | 1.751203e-48 | -8.615850e-47 |
| Msa0765080 | Msa1165230 | 0.805772 | 1.136154e-49 | -8.615850e-47 |
| Msa0765080 | Msa1165940 | 0.825466 | 4.617180e-54 | -8.615850e-47 |
| Msa0765080 | Msa1174740 | 0.800798 | 1.217072e-48 | -8.615850e-47 |
| Msa0765080 | Msa1181910 | 0.809136 | 2.196869e-50 | -8.615850e-47 |
| Msa0765080 | Msa1191100 | 0.805771 | 1.136707e-49 | -8.615850e-47 |
| Msa0765080 | Msa1205280 | 0.807373 | 5.216656e-50 | -8.615850e-47 |
| Msa0765080 | Msa1211230 | -0.834656 | 2.642099e-56 | -8.615850e-47 |
| Msa0765080 | Msa1211420 | -0.814982 | 1.167343e-51 | -8.615850e-47 |
| Msa0765080 | Msa1243740 | -0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0765080 | Msa1244600 | 0.822194 | 2.698379e-53 | -8.615850e-47 |
| Msa0765080 | Msa1254730 | 0.820625 | 6.214717e-53 | -8.615850e-47 |
| Msa0765080 | Msa1294820 | 0.808671 | 2.762394e-50 | -8.615850e-47 |
| Msa0765080 | Msa1299400 | -0.811443 | 6.983706e-51 | -8.615850e-47 |
| Msa0765080 | Msa1331050 | -0.833365 | 5.561170e-56 | -8.615850e-47 |
| Msa0765080 | Msa1342410 | 0.801257 | 9.804643e-49 | -8.615850e-47 |
| Msa0765080 | Msa1343430 | 0.800646 | 1.306892e-48 | -8.615850e-47 |
| Msa0765080 | Msa1345100 | 0.801695 | 7.976228e-49 | -8.615850e-47 |
| Msa0765080 | Msa1381350 | 0.820031 | 8.501309e-53 | -8.615850e-47 |
| Msa0765080 | Msa1393570 | 0.810636 | 1.044742e-50 | -8.615850e-47 |
| Msa0765080 | Msa1435390 | 0.832866 | 7.401117e-56 | -8.615850e-47 |
| Msa0765080 | Msa1440930 | 0.831888 | 1.293214e-55 | -8.615850e-47 |
| Msa0765080 | Msa1451160 | 0.831574 | 1.545543e-55 | -8.615850e-47 |
| Msa0120880 | Msa0765080 | 0.810660 | 1.031918e-50 | -8.615850e-47 |
| Msa0127800 | Msa0765080 | 0.827916 | 1.201267e-54 | -8.615850e-47 |
| Msa0137990 | Msa0765080 | 0.800216 | 1.599366e-48 | -8.615850e-47 |
| Msa0140820 | Msa0765080 | 0.838193 | 3.326359e-57 | -8.615850e-47 |
| Msa0172070 | Msa0765080 | 0.806094 | 9.719375e-50 | -8.615850e-47 |
| Msa0172760 | Msa0765080 | 0.811671 | 6.228907e-51 | -8.615850e-47 |
| Msa0204960 | Msa0765080 | 0.853581 | 2.174589e-61 | -8.615850e-47 |
| Msa0209350 | Msa0765080 | 0.807648 | 4.561190e-50 | -8.615850e-47 |
| Msa0211150 | Msa0765080 | 0.826214 | 3.067268e-54 | -8.615850e-47 |
| Msa0214550 | Msa0765080 | 0.839221 | 1.804466e-57 | -8.615850e-47 |
| Msa0229230 | Msa0765080 | 0.856351 | 3.411086e-62 | -8.615850e-47 |
| Msa0232080 | Msa0765080 | 0.800787 | 1.223574e-48 | -8.615850e-47 |
| Msa0374930 | Msa0765080 | 0.805429 | 1.340682e-49 | -8.615850e-47 |
| Msa0386800 | Msa0765080 | 0.811064 | 8.439776e-51 | -8.615850e-47 |
| Msa0387820 | Msa0765080 | 0.853587 | 2.165547e-61 | -8.615850e-47 |
| Msa0395820 | Msa0765080 | 0.856545 | 2.992056e-62 | -8.615850e-47 |
| Msa0468330 | Msa0765080 | 0.812925 | 3.316565e-51 | -8.615850e-47 |
| Msa0240900 | Msa0765080 | 0.810429 | 1.157787e-50 | -8.615850e-47 |
| Msa0249580 | Msa0765080 | 0.810088 | 1.371464e-50 | -8.615850e-47 |
| Msa0258390 | Msa0765080 | 0.833182 | 6.175411e-56 | -8.615850e-47 |
| Msa0281530 | Msa0765080 | 0.852417 | 4.680859e-61 | -8.615850e-47 |
| Msa0288080 | Msa0765080 | 0.804704 | 1.901468e-49 | -8.615850e-47 |
| Msa0297610 | Msa0765080 | 0.816951 | 4.244427e-52 | -8.615850e-47 |
| Msa0317970 | Msa0765080 | 0.800361 | 1.494227e-48 | -8.615850e-47 |
| Msa0320590 | Msa0765080 | 0.802733 | 4.877896e-49 | -8.615850e-47 |
| Msa0326480 | Msa0765080 | 0.864733 | 9.831435e-65 | -8.615850e-47 |
| Msa0335730 | Msa0765080 | 0.818410 | 1.988468e-52 | -8.615850e-47 |
| Msa0340380 | Msa0765080 | 0.802522 | 5.391333e-49 | -8.615850e-47 |
| Msa0343500 | Msa0765080 | 0.821170 | 4.655909e-53 | -8.615850e-47 |
| Msa0357900 | Msa0765080 | 0.830438 | 2.936632e-55 | -8.615850e-47 |
| Msa0492890 | Msa0765080 | 0.818687 | 1.720863e-52 | -8.615850e-47 |
| Msa0497210 | Msa0765080 | 0.851205 | 1.032514e-60 | -8.615850e-47 |
| Msa0512340 | Msa0765080 | 0.835356 | 1.759764e-56 | -8.615850e-47 |
| Msa0527020 | Msa0765080 | 0.806299 | 8.798657e-50 | -8.615850e-47 |
| Msa0530560 | Msa0765080 | 0.800525 | 1.383764e-48 | -8.615850e-47 |
| Msa0530780 | Msa0765080 | 0.800100 | 1.688841e-48 | -8.615850e-47 |
| Msa0531530 | Msa0765080 | 0.843162 | 1.659723e-58 | -8.615850e-47 |
| Msa0548240 | Msa0765080 | 0.815245 | 1.020353e-51 | -8.615850e-47 |
| Msa0556060 | Msa0765080 | 0.831991 | 1.219454e-55 | -8.615850e-47 |
| Msa0581110 | Msa0765080 | 0.814093 | 1.836320e-51 | -8.615850e-47 |
| Msa0588260 | Msa0765080 | 0.813511 | 2.466770e-51 | -8.615850e-47 |
| Msa0588360 | Msa0765080 | 0.828408 | 9.142179e-55 | -8.615850e-47 |
| Msa0590860 | Msa0765080 | 0.804256 | 2.357796e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0765080 | MtrunA17_Chr5g0415781 | 98.157 | 217 | 2 | 1 | 3 | 217 | 217 | 433 | 3.46e-150 | 424 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0765080 | AT1G27090.1 | 44.809 | 183 | 82 | 6 | 3 | 184 | 225 | 389 | 5.67e-16 | 76.3 |
Find 87 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGCTGCTGCTGGAAATTA+TGG | 0.214893 | 5_2:-25566850 | Msa0765080:CDS |
| TCCACCGGCGCCTTCATTTC+AGG | 0.238120 | 5_2:+25566880 | None:intergenic |
| TTCCTTGGATAATAATTTCC+AGG | 0.314001 | 5_2:+25563636 | None:intergenic |
| TTCCAGGCTGGTCATGATAT+TGG | 0.314926 | 5_2:+25563652 | None:intergenic |
| GACCAATCCTCAGGGTGATT+TGG | 0.329600 | 5_2:-25563841 | Msa0765080:CDS |
| ATCATGTTGCAGGTGATGTT+GGG | 0.346961 | 5_2:-25563539 | Msa0765080:CDS |
| GACGCGGTGGAGGTGGTAGG+AGG | 0.358812 | 5_2:-25563740 | Msa0765080:CDS |
| GATATTGGTTGCCGCCATTA+GGG | 0.362030 | 5_2:+25563667 | None:intergenic |
| TGCTCCTTTCCCTCTCCATC+TGG | 0.363992 | 5_2:+25563807 | None:intergenic |
| TGATATTGGTTGCCGCCATT+AGG | 0.365393 | 5_2:+25563666 | None:intergenic |
| ACCTTCTGAAACTCGCCTTC+AGG | 0.376938 | 5_2:+25563990 | None:intergenic |
| CGCGGTGGAGGTGGTAGGAG+GGG | 0.378240 | 5_2:-25563738 | Msa0765080:CDS |
| GAAGTTGCTGCAGCTGCTGC+TGG | 0.381590 | 5_2:-25566859 | Msa0765080:CDS |
| CTGTTGTTATAATTGTTCCT+TGG | 0.383780 | 5_2:+25563621 | None:intergenic |
| ATCGTTCATTATACCTTCTC+AGG | 0.408040 | 5_2:+25566763 | None:intergenic |
| GGTCAAGTTAATCATGTTGC+AGG | 0.433886 | 5_2:-25563549 | Msa0765080:CDS |
| GCAGCTGCAGCAACTTCCAC+CGG | 0.436695 | 5_2:+25566865 | None:intergenic |
| CAGCTGCTGCTGGAAATTAT+GGG | 0.440177 | 5_2:-25566849 | Msa0765080:CDS |
| CGTGGTGGTGGAAGAGGAAG+AGG | 0.447735 | 5_2:-25563693 | Msa0765080:CDS |
| TGTTGTAGATGCTGGTTTGA+GGG | 0.473403 | 5_2:-25566947 | Msa0765080:intron |
| AATTCTCAAGGACAAGGATC+TGG | 0.475451 | 5_2:-25564029 | Msa0765080:CDS |
| TACGACTACTCCTGAAATGA+AGG | 0.481833 | 5_2:-25566890 | Msa0765080:CDS |
| GGTCGTGGAGGTCGTGGTGG+TGG | 0.482095 | 5_2:-25563705 | Msa0765080:CDS |
| GGAGGTCGTGGTGGTGGAAG+AGG | 0.483509 | 5_2:-25563699 | Msa0765080:CDS |
| AGAGGTGGACGCGGTGGAGG+TGG | 0.485228 | 5_2:-25563747 | Msa0765080:CDS |
| TTGTTGTAGATGCTGGTTTG+AGG | 0.485495 | 5_2:-25566948 | Msa0765080:intron |
| TGAGGCTTCTGTTGAAGTGG+AGG | 0.492187 | 5_2:-25566800 | Msa0765080:CDS |
| TTGGATAATAATTTCCAGGC+TGG | 0.492928 | 5_2:+25563640 | None:intergenic |
| TTCTGAGGCTTCTGTTGAAG+TGG | 0.493679 | 5_2:-25566803 | Msa0765080:CDS |
| CAAAGAGGTGGACGCGGTGG+AGG | 0.494514 | 5_2:-25563750 | Msa0765080:CDS |
| AGAGGAAGAGGTTACCCTAA+TGG | 0.500619 | 5_2:-25563681 | Msa0765080:CDS |
| TCAAATGGTCGTGGAGGTCG+TGG | 0.508125 | 5_2:-25563711 | Msa0765080:CDS |
| TTCCAAATCACCCTGAGGAT+TGG | 0.511408 | 5_2:+25563839 | None:intergenic |
| ACATGAGCAGACCAATCCTC+AGG | 0.511425 | 5_2:-25563850 | Msa0765080:CDS |
| AATCATGTTGCAGGTGATGT+TGG | 0.517059 | 5_2:-25563540 | Msa0765080:CDS |
| GAGGCTTCTGTTGAAGTGGA+GGG | 0.522429 | 5_2:-25566799 | Msa0765080:CDS |
| GTGGACGCGGTGGAGGTGGT+AGG | 0.530530 | 5_2:-25563743 | Msa0765080:CDS |
| GAGGATTGGTCTGCTCATGT+TGG | 0.531059 | 5_2:+25563853 | None:intergenic |
| GGTGCCGGTGCACGGTTCTG+AGG | 0.537359 | 5_2:-25566818 | Msa0765080:CDS |
| TTGGTCTGCTCATGTTGGAC+TGG | 0.537795 | 5_2:+25563858 | None:intergenic |
| ACGCGGTGGAGGTGGTAGGA+GGG | 0.538237 | 5_2:-25563739 | Msa0765080:CDS |
| TCCTGAAATGAAGGCGCCGG+TGG | 0.544678 | 5_2:-25566881 | Msa0765080:CDS |
| AATTATAACAACAGAGGACG+TGG | 0.548087 | 5_2:-25563612 | Msa0765080:CDS |
| GTTGAATAAGATTATGTCGT+CGG | 0.549357 | 5_2:-25566920 | Msa0765080:CDS |
| GGTAGGAGGGGTTATTCAAA+TGG | 0.558247 | 5_2:-25563726 | Msa0765080:CDS |
| TACTACAGTAACCATGGTGC+AGG | 0.560095 | 5_2:-25563573 | Msa0765080:CDS |
| TCAACCAGATGGAGAGGGAA+AGG | 0.569449 | 5_2:-25563811 | Msa0765080:CDS |
| AGCAGAAAATGCAGCAGAGG+CGG | 0.574303 | 5_2:-25563883 | Msa0765080:CDS |
| GAAGGAACTGCAAATTCTCA+AGG | 0.574901 | 5_2:-25564041 | Msa0765080:CDS |
| TTCTGATTCTCAGCCTGAGA+AGG | 0.580133 | 5_2:-25566776 | Msa0765080:intron |
| AACCAATATCATGACCAGCC+TGG | 0.585533 | 5_2:-25563654 | Msa0765080:CDS |
| GAAGCCTCAGAACCGTGCAC+CGG | 0.585641 | 5_2:+25566814 | None:intergenic |
| ATCAGTACTACCCTAGGAGG+GGG | 0.585668 | 5_2:-25563785 | Msa0765080:CDS |
| AGGGGTTATTCAAATGGTCG+TGG | 0.587046 | 5_2:-25563720 | Msa0765080:CDS |
| AGCCTGGAAATTATTATCCA+AGG | 0.590589 | 5_2:-25563638 | Msa0765080:CDS |
| AGGAGCATCAGTACTACCCT+AGG | 0.594284 | 5_2:-25563791 | Msa0765080:CDS |
| CAGAATCAAAGAGGTGGACG+CGG | 0.594472 | 5_2:-25563756 | Msa0765080:CDS |
| TTGGAATACAATCAACCAGA+TGG | 0.595382 | 5_2:-25563822 | Msa0765080:CDS |
| GCATCAGTACTACCCTAGGA+GGG | 0.597546 | 5_2:-25563787 | Msa0765080:CDS |
| CAGTACTACCCTAGGAGGGG+GGG | 0.599555 | 5_2:-25563783 | Msa0765080:CDS |
| TACTCCTGAAATGAAGGCGC+CGG | 0.600256 | 5_2:-25566884 | Msa0765080:CDS |
| AGAAGCAGAAAATGCAGCAG+AGG | 0.600401 | 5_2:-25563886 | Msa0765080:CDS |
| TCCTGAAGGCGAGTTTCAGA+AGG | 0.602945 | 5_2:-25563991 | Msa0765080:intron |
| AGCATCAGTACTACCCTAGG+AGG | 0.610794 | 5_2:-25563788 | Msa0765080:CDS |
| AGGATCTGGAGATGATCGGT+CGG | 0.610795 | 5_2:-25564015 | Msa0765080:CDS |
| TCATGTTGCAGGTGATGTTG+GGG | 0.611983 | 5_2:-25563538 | Msa0765080:CDS |
| AATCAAAGAGGTGGACGCGG+TGG | 0.615515 | 5_2:-25563753 | Msa0765080:CDS |
| TACAGTAACCATGGTGCAGG+TGG | 0.615862 | 5_2:-25563570 | Msa0765080:CDS |
| GACAAGGATCTGGAGATGAT+CGG | 0.618470 | 5_2:-25564019 | Msa0765080:CDS |
| GATGATCGGTCGGATCCTGA+AGG | 0.619170 | 5_2:-25564005 | Msa0765080:CDS |
| TCAGTACTACCCTAGGAGGG+GGG | 0.623179 | 5_2:-25563784 | Msa0765080:CDS |
| TTATAACAACAGAGGACGTG+GGG | 0.625856 | 5_2:-25563610 | Msa0765080:CDS |
| TACAATCAACCAGATGGAGA+GGG | 0.626907 | 5_2:-25563816 | Msa0765080:CDS |
| ATTATAACAACAGAGGACGT+GGG | 0.631139 | 5_2:-25563611 | Msa0765080:CDS |
| ATACAATCAACCAGATGGAG+AGG | 0.639413 | 5_2:-25563817 | Msa0765080:CDS |
| AATGGTCGTGGAGGTCGTGG+TGG | 0.651782 | 5_2:-25563708 | Msa0765080:CDS |
| CATGAGCAGACCAATCCTCA+GGG | 0.659746 | 5_2:-25563849 | Msa0765080:CDS |
| TAACTTGACCACCTGCACCA+TGG | 0.661351 | 5_2:+25563562 | None:intergenic |
| CATCAGTACTACCCTAGGAG+GGG | 0.664883 | 5_2:-25563786 | Msa0765080:CDS |
| AGGAACAATTATAACAACAG+AGG | 0.669186 | 5_2:-25563618 | Msa0765080:CDS |
| GGTGGATACTACAGTAACCA+TGG | 0.669836 | 5_2:-25563579 | Msa0765080:CDS |
| GGTTATCAGAATCAAAGAGG+TGG | 0.672400 | 5_2:-25563762 | Msa0765080:CDS |
| ACTGCAAATTCTCAAGGACA+AGG | 0.678365 | 5_2:-25564035 | Msa0765080:CDS |
| GGTTATTCAAATGGTCGTGG+AGG | 0.681935 | 5_2:-25563717 | Msa0765080:CDS |
| GGAAGAGGTTACCCTAATGG+CGG | 0.681996 | 5_2:-25563678 | Msa0765080:CDS |
| TTGTATTCCAAATCACCCTG+AGG | 0.690365 | 5_2:+25563834 | None:intergenic |
| TATAACAACAGAGGACGTGG+GGG | 0.719166 | 5_2:-25563609 | Msa0765080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATATAATATAATATTT+TGG | - | chr5_2:25563875-25563894 | Msa0765080:CDS | 0.0% |
| !! | ATTATATATTTATTATGTTG+TGG | - | chr5_2:25567634-25567653 | Msa0765080:intron | 10.0% |
| !! | TATAAAAATATGATAAATCT+AGG | + | chr5_2:25567674-25567693 | None:intergenic | 10.0% |
| !! | AAATTTGTAAATACAGAAAT+AGG | - | chr5_2:25563662-25563681 | Msa0765080:CDS | 15.0% |
| !! | ACTTATTAAAATGAAAAGTT+TGG | - | chr5_2:25563915-25563934 | Msa0765080:intron | 15.0% |
| !! | CTTATTAAAATGAAAAGTTT+GGG | - | chr5_2:25563916-25563935 | Msa0765080:intron | 15.0% |
| !!! | TACAATTAATTTTGTTTGTA+GGG | - | chr5_2:25565661-25565680 | Msa0765080:intron | 15.0% |
| !!! | TTTTATTGATGATTAGTATT+TGG | - | chr5_2:25565723-25565742 | Msa0765080:intron | 15.0% |
| !!! | TTTTTTGAAGTTTTATTGTT+TGG | - | chr5_2:25565977-25565996 | Msa0765080:intron | 15.0% |
| !!! | AAATGTTTTCACAAAATAAA+CGG | + | chr5_2:25566227-25566246 | None:intergenic | 15.0% |
| !! | AATATACACTTAACAATTTA+AGG | + | chr5_2:25568383-25568402 | None:intergenic | 15.0% |
| !!! | TGTGTTGATTTATTTTTAAA+TGG | - | chr5_2:25568435-25568454 | Msa0765080:intron | 15.0% |
| !! | TGGTTTAAAAAATTTAAACA+TGG | - | chr5_2:25568546-25568565 | Msa0765080:intron | 15.0% |
| !! | GTACTTAAGTGTAAAATATA+TGG | + | chr5_2:25564071-25564090 | None:intergenic | 20.0% |
| !! | TAAGTACTATTCTAATATAG+AGG | - | chr5_2:25564084-25564103 | Msa0765080:intron | 20.0% |
| !! | ATTATAAATGCGCTATAAAT+AGG | - | chr5_2:25564161-25564180 | Msa0765080:intron | 20.0% |
| !! | TTATAAATGCGCTATAAATA+GGG | - | chr5_2:25564162-25564181 | Msa0765080:intron | 20.0% |
| !!! | GAATTTTGAAAGTTGAAAAT+CGG | - | chr5_2:25564247-25564266 | Msa0765080:intron | 20.0% |
| !!! | ATAAAACAGAAACGTATTTT+CGG | - | chr5_2:25564383-25564402 | Msa0765080:intron | 20.0% |
| !! | AAAAAAATCCTCAATAAAAC+TGG | + | chr5_2:25564422-25564441 | None:intergenic | 20.0% |
| !!! | GTACAATTAATTTTGTTTGT+AGG | - | chr5_2:25565660-25565679 | Msa0765080:intron | 20.0% |
| !! | TATTGTTTGGTTGAATTATT+TGG | - | chr5_2:25565990-25566009 | Msa0765080:intron | 20.0% |
| !! | CATGTTAATATCCAAATTAT+AGG | - | chr5_2:25566183-25566202 | Msa0765080:intron | 20.0% |
| !!! | TAAGTTAGAATACAACTTTT+AGG | + | chr5_2:25566263-25566282 | None:intergenic | 20.0% |
| !!! | GTAAAGTTATCACAAATTTT+AGG | - | chr5_2:25566434-25566453 | Msa0765080:intron | 20.0% |
| !! | AAATGATTTCACAAAGTAAA+TGG | - | chr5_2:25566470-25566489 | Msa0765080:intron | 20.0% |
| !!! | CTTTTAATAAAATTTTCCCA+AGG | + | chr5_2:25567236-25567255 | None:intergenic | 20.0% |
| !! | TTTATTAGTTAATGTCTAAG+AGG | - | chr5_2:25567587-25567606 | Msa0765080:intron | 20.0% |
| !!! | ATTTTTATTGATGGTTTTGA+AGG | - | chr5_2:25567766-25567785 | Msa0765080:intron | 20.0% |
| !!! | TTTTTATTGATGGTTTTGAA+GGG | - | chr5_2:25567767-25567786 | Msa0765080:intron | 20.0% |
| !!! | ATAATCAATCTCATTTTCAT+TGG | - | chr5_2:25568093-25568112 | Msa0765080:intron | 20.0% |
| ! | ATACTGCACAAAAATATTGT+TGG | + | chr5_2:25563604-25563623 | None:intergenic | 25.0% |
| !!! | TATTTTTGTGCAGTATGTTT+AGG | - | chr5_2:25563608-25563627 | Msa0765080:CDS | 25.0% |
| ! | AAATGCTAAAATTATTGTGG+CGG | - | chr5_2:25563765-25563784 | Msa0765080:CDS | 25.0% |
| ! | ATATATGGCTAGAAAAATGT+GGG | + | chr5_2:25564056-25564075 | None:intergenic | 25.0% |
| ! | AATATATGGCTAGAAAAATG+TGG | + | chr5_2:25564057-25564076 | None:intergenic | 25.0% |
| ! | TATAAATGCGCTATAAATAG+GGG | - | chr5_2:25564163-25564182 | Msa0765080:intron | 25.0% |
| !! | TTCCAATTTCTTCAATTTTG+AGG | + | chr5_2:25564230-25564249 | None:intergenic | 25.0% |
| !! | TTATTTTCTGCTGTCAAAAT+CGG | + | chr5_2:25564367-25564386 | None:intergenic | 25.0% |
| !! | TAAAACAGAAACGTATTTTC+GGG | - | chr5_2:25564384-25564403 | Msa0765080:intron | 25.0% |
| ! | AATAAAACTGGAACAAATCT+AGG | + | chr5_2:25564410-25564429 | None:intergenic | 25.0% |
| ! | GTTACAAAAGAGATATCAAT+GGG | + | chr5_2:25564647-25564666 | None:intergenic | 25.0% |
| ! | TTACTCATCATATAGTGAAA+CGG | - | chr5_2:25564668-25564687 | Msa0765080:intron | 25.0% |
| ! | AAAGGATAATCAAGTATCAT+GGG | - | chr5_2:25564927-25564946 | Msa0765080:intron | 25.0% |
| !! | TTTACTAGAGATAACGATTT+TGG | - | chr5_2:25564972-25564991 | Msa0765080:intron | 25.0% |
| !! | TTACTAGAGATAACGATTTT+GGG | - | chr5_2:25564973-25564992 | Msa0765080:intron | 25.0% |
| ! | TTTGTATATGACAAAGTCTT+TGG | - | chr5_2:25565211-25565230 | Msa0765080:intron | 25.0% |
| ! | TGAATTATTTGGATATCTGA+TGG | - | chr5_2:25566001-25566020 | Msa0765080:intron | 25.0% |
| ! | GATGGTAAAAATGAGATTAT+TGG | - | chr5_2:25566126-25566145 | Msa0765080:intron | 25.0% |
| ! | TTATTGGATGAAATTGCATT+TGG | - | chr5_2:25566142-25566161 | Msa0765080:intron | 25.0% |
| ! | ATTTGGATATTAACATGTGA+TGG | + | chr5_2:25566180-25566199 | None:intergenic | 25.0% |
| ! | CATATCACATTCCTATAATT+TGG | + | chr5_2:25566197-25566216 | None:intergenic | 25.0% |
| !! | ATCATCAGCATTAGTTTATT+TGG | - | chr5_2:25566603-25566622 | Msa0765080:intron | 25.0% |
| !!! | TTTGTAGTTTTACAAGTTTG+AGG | - | chr5_2:25566685-25566704 | Msa0765080:intron | 25.0% |
| !!! | TTGTAGTTTTACAAGTTTGA+GGG | - | chr5_2:25566686-25566705 | Msa0765080:intron | 25.0% |
| ! | ACATTAGAGAAGCAAATTAA+TGG | + | chr5_2:25566811-25566830 | None:intergenic | 25.0% |
| ! | TACAATGTTTACAAAACCTT+GGG | - | chr5_2:25567217-25567236 | Msa0765080:intron | 25.0% |
| ! | ATCAGTAAGAAATAGAAAAC+AGG | + | chr5_2:25567315-25567334 | None:intergenic | 25.0% |
| !!! | TGTTTTCTATTTCTTACTGA+TGG | - | chr5_2:25567314-25567333 | Msa0765080:intron | 25.0% |
| ! | TATATTTGAAGATAGTCACA+AGG | + | chr5_2:25567478-25567497 | None:intergenic | 25.0% |
| ! | CTATCTTCAAATATATGTGT+TGG | - | chr5_2:25567483-25567502 | Msa0765080:intron | 25.0% |
| !!! | GTGAGAATCATTTTTATTGA+TGG | - | chr5_2:25567757-25567776 | Msa0765080:intron | 25.0% |
| ! | TGGAAATGATGATTAGATAT+AGG | - | chr5_2:25567866-25567885 | Msa0765080:intron | 25.0% |
| ! | ATTAGATATAGGACTTAAGA+GGG | - | chr5_2:25567877-25567896 | Msa0765080:intron | 25.0% |
| ! | TAATTGTGACCATCAATTTA+TGG | - | chr5_2:25568057-25568076 | Msa0765080:intron | 25.0% |
| ! | TGGCTGAAATACATTTAATA+CGG | + | chr5_2:25568185-25568204 | None:intergenic | 25.0% |
| !! | AAAAAACGTTTGTTAGTGTT+GGG | - | chr5_2:25568246-25568265 | Msa0765080:intron | 25.0% |
| ! | CAGTAAATAATAAGTTCACA+AGG | + | chr5_2:25568319-25568338 | None:intergenic | 25.0% |
| ! | ATACACTTAACAATTTAAGG+AGG | + | chr5_2:25568380-25568399 | None:intergenic | 25.0% |
| ! | TCATAATAAGTGATAAACTC+TGG | + | chr5_2:25568407-25568426 | None:intergenic | 25.0% |
| ! | ATCAAAGAACACAAAAAACT+TGG | + | chr5_2:25568575-25568594 | None:intergenic | 25.0% |
| !! | AGCTAAAAAAGTATAACACA+GGG | + | chr5_2:25568614-25568633 | None:intergenic | 25.0% |
| !! | AAGCTAAAAAAGTATAACAC+AGG | + | chr5_2:25568615-25568634 | None:intergenic | 25.0% |
| ! | TTCATTCTACAAAATGCATA+TGG | + | chr5_2:25568645-25568664 | None:intergenic | 25.0% |
| !! | ATATGCATTTTGTAGAATGA+AGG | - | chr5_2:25568644-25568663 | Msa0765080:intron | 25.0% |
| GCGAAATGCTAAAATTATTG+TGG | - | chr5_2:25563762-25563781 | Msa0765080:CDS | 30.0% | |
| AATGCTAAAATTATTGTGGC+GGG | - | chr5_2:25563766-25563785 | Msa0765080:CDS | 30.0% | |
| !! | ATGAAAAGTTTGGGATTTTG+AGG | - | chr5_2:25563925-25563944 | Msa0765080:intron | 30.0% |
| CAATCATATATGTTTGGCAA+GGG | + | chr5_2:25564020-25564039 | None:intergenic | 30.0% | |
| GTGTAGCAATCATATATGTT+TGG | + | chr5_2:25564026-25564045 | None:intergenic | 30.0% | |
| TATATGGCTAGAAAAATGTG+GGG | + | chr5_2:25564055-25564074 | None:intergenic | 30.0% | |
| TGCCTCAAAATTGAAGAAAT+TGG | - | chr5_2:25564225-25564244 | Msa0765080:intron | 30.0% | |
| !! | TTTTGAAAGTTGAAAATCGG+TGG | - | chr5_2:25564250-25564269 | Msa0765080:intron | 30.0% |
| CAAAAAACAGAGTCCAAAAT+TGG | + | chr5_2:25564297-25564316 | None:intergenic | 30.0% | |
| !!! | GATTTGTTCCAGTTTTATTG+AGG | - | chr5_2:25564411-25564430 | Msa0765080:intron | 30.0% |
| ! | TTTGAAAGTTGATTCACCTT+GGG | - | chr5_2:25564539-25564558 | Msa0765080:intron | 30.0% |
| CGTTACAAAAGAGATATCAA+TGG | + | chr5_2:25564648-25564667 | None:intergenic | 30.0% | |
| !! | TGTTCCATACACTTTGATTT+TGG | - | chr5_2:25564808-25564827 | Msa0765080:intron | 30.0% |
| CAAAGGATAATCAAGTATCA+TGG | - | chr5_2:25564926-25564945 | Msa0765080:intron | 30.0% | |
| ACAACTTTACTCATTCAAGA+TGG | - | chr5_2:25565256-25565275 | Msa0765080:intron | 30.0% | |
| ATTCAAGATGGTAAAGTCAA+AGG | - | chr5_2:25565268-25565287 | Msa0765080:intron | 30.0% | |
| ! | CAACAAAATCATTGGTGATT+TGG | - | chr5_2:25565316-25565335 | Msa0765080:intron | 30.0% |
| AAAATTAATTGTACCACTCC+CGG | + | chr5_2:25565654-25565673 | None:intergenic | 30.0% | |
| GTTGAATAAGATTATGTCGT+CGG | - | chr5_2:25565783-25565802 | Msa0765080:intron | 30.0% | |
| CGAATATCCAAATAACAGAA+AGG | + | chr5_2:25566074-25566093 | None:intergenic | 30.0% | |
| ! | CTGTTATTTGGATATTCGTT+AGG | - | chr5_2:25566076-25566095 | Msa0765080:intron | 30.0% |
| TATTTGGATATTCGTTAGGA+TGG | - | chr5_2:25566080-25566099 | Msa0765080:intron | 30.0% | |
| TCAGTATGTTTAATGTCTGT+TGG | - | chr5_2:25566104-25566123 | Msa0765080:intron | 30.0% | |
| TATGTTTAATGTCTGTTGGA+TGG | - | chr5_2:25566108-25566127 | Msa0765080:intron | 30.0% | |
| TTATAGGAATGTGATATGTC+AGG | - | chr5_2:25566199-25566218 | Msa0765080:intron | 30.0% | |
| TATAGGAATGTGATATGTCA+GGG | - | chr5_2:25566200-25566219 | Msa0765080:intron | 30.0% | |
| AGAAGATGAAATGCTAGTTA+AGG | - | chr5_2:25566316-25566335 | Msa0765080:intron | 30.0% | |
| TAGGTATAGATTGATGGAAA+TGG | + | chr5_2:25566532-25566551 | None:intergenic | 30.0% | |
| AACAGTTAGGTATAGATTGA+TGG | + | chr5_2:25566538-25566557 | None:intergenic | 30.0% | |
| ! | GTTAGAACTCTTTTATCAGA+AGG | - | chr5_2:25566646-25566665 | Msa0765080:intron | 30.0% |
| !! | TGTAGTTTTACAAGTTTGAG+GGG | - | chr5_2:25566687-25566706 | Msa0765080:intron | 30.0% |
| CATTGTGGATATGAATTTGA+AGG | - | chr5_2:25566782-25566801 | Msa0765080:CDS | 30.0% | |
| AAGTTAAACTTCCTTTCTCT+TGG | - | chr5_2:25566905-25566924 | Msa0765080:CDS | 30.0% | |
| TCTAGACATTTCAAATGCTA+GGG | + | chr5_2:25567098-25567117 | None:intergenic | 30.0% | |
| ! | TAGCATTTGAAATGTCTAGA+GGG | - | chr5_2:25567098-25567117 | Msa0765080:intron | 30.0% |
| TCTAGAGGGATTACTAATAA+TGG | - | chr5_2:25567112-25567131 | Msa0765080:intron | 30.0% | |
| CTACAATGTTTACAAAACCT+TGG | - | chr5_2:25567216-25567235 | Msa0765080:intron | 30.0% | |
| ATCATGCATTCTTCAATCAT+AGG | + | chr5_2:25567271-25567290 | None:intergenic | 30.0% | |
| ATTGAAGAATGCATGATTAG+AGG | - | chr5_2:25567274-25567293 | Msa0765080:intron | 30.0% | |
| !!! | ATGATTAGAGGTTTTGACTT+TGG | - | chr5_2:25567286-25567305 | Msa0765080:intron | 30.0% |
| ! | TGATTTTTCTCAAATAAGCC+TGG | - | chr5_2:25567382-25567401 | Msa0765080:intron | 30.0% |
| ! | AGATATGCAAACATTTTTCC+AGG | + | chr5_2:25567403-25567422 | None:intergenic | 30.0% |
| ! | TGATGTTGTTGTATTTCTGT+TGG | - | chr5_2:25567509-25567528 | Msa0765080:intron | 30.0% |
| GATTAGATATAGGACTTAAG+AGG | - | chr5_2:25567876-25567895 | Msa0765080:intron | 30.0% | |
| TTAATTTCTGTCATAGAGCA+TGG | + | chr5_2:25568040-25568059 | None:intergenic | 30.0% | |
| ATACACACAAACATACCTAA+TGG | + | chr5_2:25568130-25568149 | None:intergenic | 30.0% | |
| ! | ATTGTATAACTTTTGCTACG+TGG | + | chr5_2:25568205-25568224 | None:intergenic | 30.0% |
| ! | CAAAAAACGTTTGTTAGTGT+TGG | - | chr5_2:25568245-25568264 | Msa0765080:intron | 30.0% |
| TTTAAACCAAATGCAGAAAC+AGG | + | chr5_2:25568535-25568554 | None:intergenic | 30.0% | |
| AAAGAACACAAAAAACTTGG+CGG | + | chr5_2:25568572-25568591 | None:intergenic | 30.0% | |
| !! | TATAACACAGGGATTTGTTT+TGG | + | chr5_2:25568603-25568622 | None:intergenic | 30.0% |
| TTCCTTGGATAATAATTTCC+AGG | + | chr5_2:25569070-25569089 | None:intergenic | 30.0% | |
| CTGTTGTTATAATTGTTCCT+TGG | + | chr5_2:25569085-25569104 | None:intergenic | 30.0% | |
| AGGAACAATTATAACAACAG+AGG | - | chr5_2:25569085-25569104 | Msa0765080:intron | 30.0% | |
| CTAAGCATGATGTTCGATTA+GGG | - | chr5_2:25563560-25563579 | Msa0765080:CDS | 35.0% | |
| TCGATTAGGGTTTAAACTAG+TGG | - | chr5_2:25563573-25563592 | Msa0765080:CDS | 35.0% | |
| ATGCTAAAATTATTGTGGCG+GGG | - | chr5_2:25563767-25563786 | Msa0765080:CDS | 35.0% | |
| !! | AAAAGTTTGGGATTTTGAGG+AGG | - | chr5_2:25563928-25563947 | Msa0765080:intron | 35.0% |
| TGAAAGATTTAAACCAGTGG+CGG | + | chr5_2:25563982-25564001 | None:intergenic | 35.0% | |
| TCCTGAAAGATTTAAACCAG+TGG | + | chr5_2:25563985-25564004 | None:intergenic | 35.0% | |
| GCAATCATATATGTTTGGCA+AGG | + | chr5_2:25564021-25564040 | None:intergenic | 35.0% | |
| ATATGGCTAGAAAAATGTGG+GGG | + | chr5_2:25564054-25564073 | None:intergenic | 35.0% | |
| CTCACATACCAATCTATGAT+TGG | - | chr5_2:25564125-25564144 | Msa0765080:intron | 35.0% | |
| ACATACCAATCTATGATTGG+AGG | - | chr5_2:25564128-25564147 | Msa0765080:intron | 35.0% | |
| TTGCTGGAAGATAGGAAATT+GGG | - | chr5_2:25564189-25564208 | Msa0765080:intron | 35.0% | |
| !! | TCTGTTGGTTCTGCAAAAAT+CGG | - | chr5_2:25564317-25564336 | Msa0765080:intron | 35.0% |
| ACATTGTATCAGTGTAAACC+TGG | - | chr5_2:25564455-25564474 | Msa0765080:intron | 35.0% | |
| TTGTCTCTTAGCAACAAACT+AGG | - | chr5_2:25564515-25564534 | Msa0765080:intron | 35.0% | |
| TGTCTCTTAGCAACAAACTA+GGG | - | chr5_2:25564516-25564535 | Msa0765080:intron | 35.0% | |
| ! | GTTTGAAAGTTGATTCACCT+TGG | - | chr5_2:25564538-25564557 | Msa0765080:intron | 35.0% |
| AATCCTAATAGTGTTTCCCA+AGG | + | chr5_2:25564558-25564577 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | - | chr5_2:25564566-25564585 | Msa0765080:intron | 35.0% | |
| TCATCATATAGTGAAACGGA+TGG | - | chr5_2:25564672-25564691 | Msa0765080:intron | 35.0% | |
| !! | AAGAATTTGTTGACCCAGTT+CGG | + | chr5_2:25564730-25564749 | None:intergenic | 35.0% |
| GCAACCAAAATCAAAGTGTA+TGG | + | chr5_2:25564815-25564834 | None:intergenic | 35.0% | |
| CCAATAACAAACTTGATGTG+TGG | + | chr5_2:25564854-25564873 | None:intergenic | 35.0% | |
| !! | CCACACATCAAGTTTGTTAT+TGG | - | chr5_2:25564851-25564870 | Msa0765080:intron | 35.0% |
| CTCATCGAATTCACAACAAT+TGG | - | chr5_2:25564882-25564901 | Msa0765080:intron | 35.0% | |
| !!! | GAGATAACGATTTTGGGTTA+TGG | - | chr5_2:25564979-25564998 | Msa0765080:intron | 35.0% |
| !!! | TAACGATTTTGGGTTATGGA+AGG | - | chr5_2:25564983-25565002 | Msa0765080:intron | 35.0% |
| !! | AAGTGTGAGAAAGCTTTGAA+GGG | - | chr5_2:25565035-25565054 | Msa0765080:intron | 35.0% |
| GTGGAGTTCAACAAAATCAT+TGG | - | chr5_2:25565308-25565327 | Msa0765080:intron | 35.0% | |
| AAGAATACACATGATCTGTC+TGG | - | chr5_2:25565501-25565520 | Msa0765080:intron | 35.0% | |
| !!! | GTACTCATTTTCTAGTTGAG+AGG | - | chr5_2:25565595-25565614 | Msa0765080:intron | 35.0% |
| !!! | TCATTTTCTAGTTGAGAGGT+TGG | - | chr5_2:25565599-25565618 | Msa0765080:intron | 35.0% |
| !!! | GTTTTTGTTGTTGTAGATGC+TGG | - | chr5_2:25565748-25565767 | Msa0765080:intron | 35.0% |
| ! | TGGAAATTATGGGTCTTTTC+AGG | - | chr5_2:25565864-25565883 | Msa0765080:intron | 35.0% |
| ATCGTTCATTATACCTTCTC+AGG | + | chr5_2:25565943-25565962 | None:intergenic | 35.0% | |
| TGGAATAATGTAGAGTGTGA+TGG | - | chr5_2:25566043-25566062 | Msa0765080:intron | 35.0% | |
| CGAAATGGAATGAAATGTCA+GGG | + | chr5_2:25566498-25566517 | None:intergenic | 35.0% | |
| TCGAAATGGAATGAAATGTC+AGG | + | chr5_2:25566499-25566518 | None:intergenic | 35.0% | |
| ATTGATGGAAATGGACAGAA+TGG | + | chr5_2:25566523-25566542 | None:intergenic | 35.0% | |
| AAGAACACTACACAACAGTT+AGG | + | chr5_2:25566551-25566570 | None:intergenic | 35.0% | |
| !! | GTTTTGTTAGTGTTGTTCAC+TGG | - | chr5_2:25566578-25566597 | Msa0765080:intron | 35.0% |
| AGATAAATTTGACGTGTTGC+AGG | - | chr5_2:25567011-25567030 | Msa0765080:intron | 35.0% | |
| GATAAATTTGACGTGTTGCA+GGG | - | chr5_2:25567012-25567031 | Msa0765080:intron | 35.0% | |
| ATAAATTTGACGTGTTGCAG+GGG | - | chr5_2:25567013-25567032 | Msa0765080:intron | 35.0% | |
| CTCTAGACATTTCAAATGCT+AGG | + | chr5_2:25567099-25567118 | None:intergenic | 35.0% | |
| ! | CTAGCATTTGAAATGTCTAG+AGG | - | chr5_2:25567097-25567116 | Msa0765080:intron | 35.0% |
| CAACAATGATGCACTTACAA+AGG | + | chr5_2:25567801-25567820 | None:intergenic | 35.0% | |
| !! | AGAGTGGCATATAACTTGTT+AGG | - | chr5_2:25567972-25567991 | Msa0765080:intron | 35.0% |
| CAATACGCACCATAAATTGA+TGG | + | chr5_2:25568069-25568088 | None:intergenic | 35.0% | |
| CACTTAACAATTTAAGGAGG+CGG | + | chr5_2:25568377-25568396 | None:intergenic | 35.0% | |
| !!! | TTAAGTTTTTTCTCTCTCGC+AGG | - | chr5_2:25568787-25568806 | Msa0765080:intron | 35.0% |
| TTGGAATACAATCAACCAGA+TGG | - | chr5_2:25568881-25568900 | Msa0765080:intron | 35.0% | |
| TTGGATAATAATTTCCAGGC+TGG | + | chr5_2:25569066-25569085 | None:intergenic | 35.0% | |
| AGCCTGGAAATTATTATCCA+AGG | - | chr5_2:25569065-25569084 | Msa0765080:intron | 35.0% | |
| AATTATAACAACAGAGGACG+TGG | - | chr5_2:25569091-25569110 | Msa0765080:intron | 35.0% | |
| ATTATAACAACAGAGGACGT+GGG | - | chr5_2:25569092-25569111 | Msa0765080:intron | 35.0% | |
| !! | ATGGGTATTGAGGAGAGAAA+AGG | - | chr5_2:25563527-25563546 | Msa0765080:CDS | 40.0% |
| CCTAATCGAACATCATGCTT+AGG | + | chr5_2:25563562-25563581 | None:intergenic | 40.0% | |
| CCTAAGCATGATGTTCGATT+AGG | - | chr5_2:25563559-25563578 | Msa0765080:CDS | 40.0% | |
| TGCTAAAATTATTGTGGCGG+GGG | - | chr5_2:25563768-25563787 | Msa0765080:CDS | 40.0% | |
| ! | AAACAAGGCGCATTTGACTT+TGG | + | chr5_2:25563808-25563827 | None:intergenic | 40.0% |
| !! | GCCACTGGTTTAAATCTTTC+AGG | - | chr5_2:25563981-25564000 | Msa0765080:intron | 40.0% |
| TATGGCTAGAAAAATGTGGG+GGG | + | chr5_2:25564053-25564072 | None:intergenic | 40.0% | |
| ATGCTCCTCCAATCATAGAT+TGG | + | chr5_2:25564136-25564155 | None:intergenic | 40.0% | |
| CTATAAATAGGGGAAGTTGC+TGG | - | chr5_2:25564173-25564192 | Msa0765080:intron | 40.0% | |
| GTTGCTGGAAGATAGGAAAT+TGG | - | chr5_2:25564188-25564207 | Msa0765080:intron | 40.0% | |
| !!! | GGACTCTGTTTTTTGTCTGT+TGG | - | chr5_2:25564302-25564321 | Msa0765080:intron | 40.0% |
| AGTGTAAACCTGGAGATAGA+GGG | - | chr5_2:25564465-25564484 | Msa0765080:intron | 40.0% | |
| TCACCTTGGGAAACACTATT+AGG | - | chr5_2:25564552-25564571 | Msa0765080:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | - | chr5_2:25564572-25564591 | Msa0765080:intron | 40.0% | |
| !! | CTCTCGCTGTTTTCTACTTT+TGG | - | chr5_2:25564771-25564790 | Msa0765080:intron | 40.0% |
| AAACTTGATGTGTGGAGCAA+GGG | + | chr5_2:25564846-25564865 | None:intergenic | 40.0% | |
| AAGTATCATGGGTTCGAAGT+GGG | - | chr5_2:25564938-25564957 | Msa0765080:intron | 40.0% | |
| TGGGTTATGGAAGGTAAAGA+TGG | - | chr5_2:25564992-25565011 | Msa0765080:intron | 40.0% | |
| ATGGAAGGTAAAGATGGAAG+CGG | - | chr5_2:25564998-25565017 | Msa0765080:intron | 40.0% | |
| ! | GAAGTGTGAGAAAGCTTTGA+AGG | - | chr5_2:25565034-25565053 | Msa0765080:intron | 40.0% |
| AGTTTCGAGAGAAGTAGCAA+AGG | - | chr5_2:25565151-25565170 | Msa0765080:intron | 40.0% | |
| AGTAGCAAAGGATACAACTG+CGG | - | chr5_2:25565163-25565182 | Msa0765080:intron | 40.0% | |
| ! | TGACAAAGTCTTTGGCTCAT+CGG | - | chr5_2:25565219-25565238 | Msa0765080:intron | 40.0% |
| ! | TGGTGATTTGGAGAACATTG+AGG | - | chr5_2:25565328-25565347 | Msa0765080:intron | 40.0% |
| AAAGTGATGTGTCTCACCTT+GGG | - | chr5_2:25565405-25565424 | Msa0765080:intron | 40.0% | |
| TTAAACACTCAACATCAGCC+TGG | - | chr5_2:25565466-25565485 | Msa0765080:intron | 40.0% | |
| TACTCATGATCTACCTGTTG+AGG | - | chr5_2:25565541-25565560 | Msa0765080:intron | 40.0% | |
| TTTCAAGGTGGAAGACATAG+TGG | - | chr5_2:25565569-25565588 | Msa0765080:intron | 40.0% | |
| TTCAAGGTGGAAGACATAGT+GGG | - | chr5_2:25565570-25565589 | Msa0765080:intron | 40.0% | |
| !! | TTGTTGTAGATGCTGGTTTG+AGG | - | chr5_2:25565755-25565774 | Msa0765080:intron | 40.0% |
| !! | TGTTGTAGATGCTGGTTTGA+GGG | - | chr5_2:25565756-25565775 | Msa0765080:intron | 40.0% |
| TACGACTACTCCTGAAATGA+AGG | - | chr5_2:25565813-25565832 | Msa0765080:intron | 40.0% | |
| TGATGGAGAGCGAAATTGAA+TGG | - | chr5_2:25566018-25566037 | Msa0765080:intron | 40.0% | |
| GATGGAGAGCGAAATTGAAT+GGG | - | chr5_2:25566019-25566038 | Msa0765080:intron | 40.0% | |
| GGAGTTGCCTTTCTGTTATT+TGG | - | chr5_2:25566064-25566083 | Msa0765080:intron | 40.0% | |
| ATGGACAGAATGGATCGAAA+TGG | + | chr5_2:25566513-25566532 | None:intergenic | 40.0% | |
| ! | AGTTTTACAAGTTTGAGGGG+TGG | - | chr5_2:25566690-25566709 | Msa0765080:intron | 40.0% |
| ! | GTTTTACAAGTTTGAGGGGT+GGG | - | chr5_2:25566691-25566710 | Msa0765080:intron | 40.0% |
| ATTCCTCAGCTACATACCTA+AGG | - | chr5_2:25566752-25566771 | Msa0765080:intron | 40.0% | |
| TAACCTTAGGTATGTAGCTG+AGG | + | chr5_2:25566758-25566777 | None:intergenic | 40.0% | |
| ACCTAAGGTTAGAGTCATTG+TGG | - | chr5_2:25566767-25566786 | Msa0765080:intron | 40.0% | |
| TCCACAATGACTCTAACCTT+AGG | + | chr5_2:25566771-25566790 | None:intergenic | 40.0% | |
| TTGAACTCAACAACGTTTCC+AGG | + | chr5_2:25566933-25566952 | None:intergenic | 40.0% | |
| TAAATTTGACGTGTTGCAGG+GGG | - | chr5_2:25567014-25567033 | Msa0765080:intron | 40.0% | |
| TGATGGTATTGCTTTGCATG+TGG | - | chr5_2:25567331-25567350 | Msa0765080:intron | 40.0% | |
| TGCATGTGACTTTGTAAGTC+TGG | - | chr5_2:25567821-25567840 | Msa0765080:intron | 40.0% | |
| AGGATAGAACACTTGTGAGT+TGG | + | chr5_2:25567925-25567944 | None:intergenic | 40.0% | |
| AAGACACGTTAACCTAATGC+AGG | + | chr5_2:25567952-25567971 | None:intergenic | 40.0% | |
| TAGGTTAACGTGTCTTAGAG+TGG | - | chr5_2:25567956-25567975 | Msa0765080:intron | 40.0% | |
| ACTTTAGACACACACAACAC+TGG | - | chr5_2:25568005-25568024 | Msa0765080:intron | 40.0% | |
| ! | TTCATCATCTTTTCCTCAGC+AGG | + | chr5_2:25568162-25568181 | None:intergenic | 40.0% |
| ! | AAACGTTTGTTAGTGTTGGG+AGG | - | chr5_2:25568249-25568268 | Msa0765080:intron | 40.0% |
| ! | AACGTTTGTTAGTGTTGGGA+GGG | - | chr5_2:25568250-25568269 | Msa0765080:intron | 40.0% |
| AATTTAAGGAGGCGGTGAAA+GGG | + | chr5_2:25568369-25568388 | None:intergenic | 40.0% | |
| GGTAGGATAGAAATCACATC+AGG | + | chr5_2:25568500-25568519 | None:intergenic | 40.0% | |
| GAAGGAACTGCAAATTCTCA+AGG | - | chr5_2:25568662-25568681 | Msa0765080:intron | 40.0% | |
| ACTGCAAATTCTCAAGGACA+AGG | - | chr5_2:25568668-25568687 | Msa0765080:intron | 40.0% | |
| AATTCTCAAGGACAAGGATC+TGG | - | chr5_2:25568674-25568693 | Msa0765080:intron | 40.0% | |
| TTGTATTCCAAATCACCCTG+AGG | + | chr5_2:25568872-25568891 | None:intergenic | 40.0% | |
| ATACAATCAACCAGATGGAG+AGG | - | chr5_2:25568886-25568905 | Msa0765080:intron | 40.0% | |
| TACAATCAACCAGATGGAGA+GGG | - | chr5_2:25568887-25568906 | Msa0765080:intron | 40.0% | |
| GGTTATCAGAATCAAAGAGG+TGG | - | chr5_2:25568941-25568960 | Msa0765080:intron | 40.0% | |
| TTATAACAACAGAGGACGTG+GGG | - | chr5_2:25569093-25569112 | Msa0765080:intron | 40.0% | |
| GGTCAAGTTAATCATGTTGC+AGG | - | chr5_2:25569154-25569173 | Msa0765080:intron | 40.0% | |
| AATCATGTTGCAGGTGATGT+TGG | - | chr5_2:25569163-25569182 | Msa0765080:intron | 40.0% | |
| ATCATGTTGCAGGTGATGTT+GGG | - | chr5_2:25569164-25569183 | Msa0765080:intron | 40.0% | |
| TCCTGCGTAGTGGTAAAACA+AGG | + | chr5_2:25563823-25563842 | None:intergenic | 45.0% | |
| !! | GTTGGTTCTGCAAAAATCGG+TGG | - | chr5_2:25564320-25564339 | Msa0765080:intron | 45.0% |
| CAGTGTAAACCTGGAGATAG+AGG | - | chr5_2:25564464-25564483 | Msa0765080:intron | 45.0% | |
| GTGTAAACCTGGAGATAGAG+GGG | - | chr5_2:25564466-25564485 | Msa0765080:intron | 45.0% | |
| TGTAAACCTGGAGATAGAGG+GGG | - | chr5_2:25564467-25564486 | Msa0765080:intron | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | - | chr5_2:25564573-25564592 | Msa0765080:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | - | chr5_2:25564601-25564620 | Msa0765080:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | - | chr5_2:25564604-25564623 | Msa0765080:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | - | chr5_2:25564605-25564624 | Msa0765080:intron | 45.0% | |
| TCCAAATTGACCTAGTCTGG+GGG | + | chr5_2:25564707-25564726 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | + | chr5_2:25564708-25564727 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | + | chr5_2:25564709-25564728 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | - | chr5_2:25564713-25564732 | Msa0765080:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | - | chr5_2:25564714-25564733 | Msa0765080:intron | 45.0% | |
| CAAACTTGATGTGTGGAGCA+AGG | + | chr5_2:25564847-25564866 | None:intergenic | 45.0% | |
| CAAGTATCATGGGTTCGAAG+TGG | - | chr5_2:25564937-25564956 | Msa0765080:intron | 45.0% | |
| !! | GAGAAAGCTTTGAAGGGTGA+AGG | - | chr5_2:25565041-25565060 | Msa0765080:intron | 45.0% |
| ! | AGTGTCATTGTCTTGTGCCT+CGG | - | chr5_2:25565122-25565141 | Msa0765080:intron | 45.0% |
| CTCTCGAAACTTTATTCCCG+AGG | + | chr5_2:25565142-25565161 | None:intergenic | 45.0% | |
| ATACAACTGCGGCATCAATG+AGG | - | chr5_2:25565174-25565193 | Msa0765080:intron | 45.0% | |
| GGTAAAGTCAAAGGCCATCA+TGG | - | chr5_2:25565277-25565296 | Msa0765080:intron | 45.0% | |
| !! | TCTGATGGTGTGGTGTTGTT+TGG | - | chr5_2:25565373-25565392 | Msa0765080:intron | 45.0% |
| GAAAGTGATGTGTCTCACCT+TGG | - | chr5_2:25565404-25565423 | Msa0765080:intron | 45.0% | |
| TACACATGATCTGTCTGGAG+AGG | - | chr5_2:25565506-25565525 | Msa0765080:intron | 45.0% | |
| TCATGATCTACCTGTTGAGG+TGG | - | chr5_2:25565544-25565563 | Msa0765080:intron | 45.0% | |
| TTAGGTGGAGTTGAACACAC+CGG | - | chr5_2:25565632-25565651 | Msa0765080:intron | 45.0% | |
| CAGCTGCTGCTGGAAATTAT+GGG | - | chr5_2:25565854-25565873 | Msa0765080:intron | 45.0% | |
| !!! | TTATGGGTCTTTTCAGGTGC+CGG | - | chr5_2:25565870-25565889 | Msa0765080:intron | 45.0% |
| !! | TTCTGAGGCTTCTGTTGAAG+TGG | - | chr5_2:25565900-25565919 | Msa0765080:intron | 45.0% |
| TTCTGATTCTCAGCCTGAGA+AGG | - | chr5_2:25565927-25565946 | Msa0765080:intron | 45.0% | |
| GAGAGCGAAATTGAATGGGA+TGG | - | chr5_2:25566023-25566042 | Msa0765080:intron | 45.0% | |
| ACTTCCTTTCTCTTGGAACC+TGG | - | chr5_2:25566912-25566931 | Msa0765080:CDS | 45.0% | |
| GTTTCCAGGTTCCAAGAGAA+AGG | + | chr5_2:25566919-25566938 | None:intergenic | 45.0% | |
| AAATTTGACGTGTTGCAGGG+GGG | - | chr5_2:25567015-25567034 | Msa0765080:intron | 45.0% | |
| ! | GTAAGTCTGGCTTCCTCAAA+TGG | - | chr5_2:25567834-25567853 | Msa0765080:intron | 45.0% |
| ! | TCTGGCTTCCTCAAATGGTA+GGG | - | chr5_2:25567839-25567858 | Msa0765080:intron | 45.0% |
| !! | TTAAGAGGGTACCCTACATG+TGG | - | chr5_2:25567891-25567910 | Msa0765080:intron | 45.0% |
| TCTATCCTCCTTCCTGCATT+AGG | - | chr5_2:25567937-25567956 | Msa0765080:intron | 45.0% | |
| GTTAACCTAATGCAGGAAGG+AGG | + | chr5_2:25567945-25567964 | None:intergenic | 45.0% | |
| CACGTTAACCTAATGCAGGA+AGG | + | chr5_2:25567948-25567967 | None:intergenic | 45.0% | |
| TTAGACACACACAACACTGG+TGG | - | chr5_2:25568008-25568027 | Msa0765080:intron | 45.0% | |
| CACAAACATACCTAATGGCG+CGG | + | chr5_2:25568125-25568144 | None:intergenic | 45.0% | |
| !! | GTATTAGAAAGCACCTGCTG+AGG | - | chr5_2:25568146-25568165 | Msa0765080:intron | 45.0% |
| CAATTTAAGGAGGCGGTGAA+AGG | + | chr5_2:25568370-25568389 | None:intergenic | 45.0% | |
| GACAAGGATCTGGAGATGAT+CGG | - | chr5_2:25568684-25568703 | Msa0765080:intron | 45.0% | |
| AGAAGCAGAAAATGCAGCAG+AGG | - | chr5_2:25568817-25568836 | Msa0765080:intron | 45.0% | |
| TTCCAAATCACCCTGAGGAT+TGG | + | chr5_2:25568867-25568886 | None:intergenic | 45.0% | |
| GGGGGTTATCAGAATCAAAG+AGG | - | chr5_2:25568938-25568957 | Msa0765080:intron | 45.0% | |
| GGTAGGAGGGGTTATTCAAA+TGG | - | chr5_2:25568977-25568996 | Msa0765080:intron | 45.0% | |
| AGGGGTTATTCAAATGGTCG+TGG | - | chr5_2:25568983-25569002 | Msa0765080:intron | 45.0% | |
| GGTTATTCAAATGGTCGTGG+AGG | - | chr5_2:25568986-25569005 | Msa0765080:intron | 45.0% | |
| AGAGGAAGAGGTTACCCTAA+TGG | - | chr5_2:25569022-25569041 | Msa0765080:intron | 45.0% | |
| ! | GATATTGGTTGCCGCCATTA+GGG | + | chr5_2:25569039-25569058 | None:intergenic | 45.0% |
| ! | TGATATTGGTTGCCGCCATT+AGG | + | chr5_2:25569040-25569059 | None:intergenic | 45.0% |
| AACCAATATCATGACCAGCC+TGG | - | chr5_2:25569049-25569068 | Msa0765080:intron | 45.0% | |
| ! | TTCCAGGCTGGTCATGATAT+TGG | + | chr5_2:25569054-25569073 | None:intergenic | 45.0% |
| TATAACAACAGAGGACGTGG+GGG | - | chr5_2:25569094-25569113 | Msa0765080:intron | 45.0% | |
| GGTGGATACTACAGTAACCA+TGG | - | chr5_2:25569124-25569143 | Msa0765080:intron | 45.0% | |
| TACTACAGTAACCATGGTGC+AGG | - | chr5_2:25569130-25569149 | Msa0765080:intron | 45.0% | |
| TCATGTTGCAGGTGATGTTG+GGG | - | chr5_2:25569165-25569184 | Msa0765080:intron | 45.0% | |
| !!! | GCCTTGTTTTACCACTACGC+AGG | - | chr5_2:25563819-25563838 | Msa0765080:CDS | 50.0% |
| AGCATTTGCATCCTGCGTAG+TGG | + | chr5_2:25563833-25563852 | None:intergenic | 50.0% | |
| !! | TTGGGATTTTGAGGAGGCCA+TGG | - | chr5_2:25563934-25563953 | Msa0765080:intron | 50.0% |
| ! | TTTAAACCAGTGGCGGAGCT+AGG | + | chr5_2:25563975-25563994 | None:intergenic | 50.0% |
| !! | AGAGGTGCTAGATGCAAGAC+TGG | - | chr5_2:25564102-25564121 | Msa0765080:intron | 50.0% |
| AGGGGAAGTTGCTGGAAGAT+AGG | - | chr5_2:25564181-25564200 | Msa0765080:intron | 50.0% | |
| !! | GGCCACTGTGCTCTGAAAAT+CGG | + | chr5_2:25564276-25564295 | None:intergenic | 50.0% |
| ! | CAGAGCACAGTGGCCAATTT+TGG | - | chr5_2:25564281-25564300 | Msa0765080:intron | 50.0% |
| GCAAAAATCGGTGGCCGATT+TGG | - | chr5_2:25564329-25564348 | Msa0765080:intron | 50.0% | |
| AGATAGAGGGGGCTGAAACA+AGG | - | chr5_2:25564478-25564497 | Msa0765080:intron | 50.0% | |
| GATAGAGGGGGCTGAAACAA+GGG | - | chr5_2:25564479-25564498 | Msa0765080:intron | 50.0% | |
| ATAGAGGGGGCTGAAACAAG+GGG | - | chr5_2:25564480-25564499 | Msa0765080:intron | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | - | chr5_2:25564579-25564598 | Msa0765080:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | - | chr5_2:25564703-25564722 | Msa0765080:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | + | chr5_2:25564710-25564729 | None:intergenic | 50.0% | |
| ATCCTTTGACCTTTGCCCCA+CGG | + | chr5_2:25564914-25564933 | None:intergenic | 50.0% | |
| GAAGGGTGAAGGTTCGTTAC+CGG | - | chr5_2:25565052-25565071 | Msa0765080:intron | 50.0% | |
| GCACAAGACAATGACACTCC+TGG | + | chr5_2:25565120-25565139 | None:intergenic | 50.0% | |
| ! | GTGTCATTGTCTTGTGCCTC+GGG | - | chr5_2:25565123-25565142 | Msa0765080:intron | 50.0% |
| CTCCACAAGTAGCTCCATGA+TGG | + | chr5_2:25565294-25565313 | None:intergenic | 50.0% | |
| GAACATTGAGGTGCGTCTTG+AGG | - | chr5_2:25565340-25565359 | Msa0765080:intron | 50.0% | |
| !! | GATGGTGTGGTGTTGTTTGG+AGG | - | chr5_2:25565376-25565395 | Msa0765080:intron | 50.0% |
| ACCTTGGGAGTGATGCTTAG+TGG | - | chr5_2:25565420-25565439 | Msa0765080:intron | 50.0% | |
| TCCACTAAGCATCACTCCCA+AGG | + | chr5_2:25565424-25565443 | None:intergenic | 50.0% | |
| ACATGATCTGTCTGGAGAGG+CGG | - | chr5_2:25565509-25565528 | Msa0765080:intron | 50.0% | |
| CCTTGAAACTCCACCTCAAC+AGG | + | chr5_2:25565557-25565576 | None:intergenic | 50.0% | |
| CCTGTTGAGGTGGAGTTTCA+AGG | - | chr5_2:25565554-25565573 | Msa0765080:intron | 50.0% | |
| GTTGAGGTGGAGTTTCAAGG+TGG | - | chr5_2:25565557-25565576 | Msa0765080:intron | 50.0% | |
| GAGGTTGGAAGCTCAGCTTT+AGG | - | chr5_2:25565614-25565633 | Msa0765080:intron | 50.0% | |
| !! | GTTGGAAGCTCAGCTTTAGG+TGG | - | chr5_2:25565617-25565636 | Msa0765080:intron | 50.0% |
| TAGGTGGAGTTGAACACACC+GGG | - | chr5_2:25565633-25565652 | Msa0765080:intron | 50.0% | |
| ! | TACTCCTGAAATGAAGGCGC+CGG | - | chr5_2:25565819-25565838 | Msa0765080:intron | 50.0% |
| GCAGCTGCTGCTGGAAATTA+TGG | - | chr5_2:25565853-25565872 | Msa0765080:intron | 50.0% | |
| TGAGGCTTCTGTTGAAGTGG+AGG | - | chr5_2:25565903-25565922 | Msa0765080:intron | 50.0% | |
| GAGGCTTCTGTTGAAGTGGA+GGG | - | chr5_2:25565904-25565923 | Msa0765080:intron | 50.0% | |
| AAGTTTGAGGGGTGGGATCA+TGG | - | chr5_2:25566698-25566717 | Msa0765080:intron | 50.0% | |
| AGTTTGAGGGGTGGGATCAT+GGG | - | chr5_2:25566699-25566718 | Msa0765080:intron | 50.0% | |
| ! | GTCTGGCTTCCTCAAATGGT+AGG | - | chr5_2:25567838-25567857 | Msa0765080:intron | 50.0% |
| CTGGCTTCCTCAAATGGTAG+GGG | - | chr5_2:25567840-25567859 | Msa0765080:intron | 50.0% | |
| TCCTCAAATGGTAGGGGTCT+TGG | - | chr5_2:25567846-25567865 | Msa0765080:intron | 50.0% | |
| TCCAAGACCCCTACCATTTG+AGG | + | chr5_2:25567850-25567869 | None:intergenic | 50.0% | |
| ! | AGGGTACCCTACATGTGGTT+GGG | - | chr5_2:25567896-25567915 | Msa0765080:intron | 50.0% |
| TGGCTACCCAACCACATGTA+GGG | + | chr5_2:25567905-25567924 | None:intergenic | 50.0% | |
| TTGGCTACCCAACCACATGT+AGG | + | chr5_2:25567906-25567925 | None:intergenic | 50.0% | |
| !! | TGGGAGGGTACTGAGATGTT+AGG | - | chr5_2:25568265-25568284 | Msa0765080:intron | 50.0% |
| AGGATCTGGAGATGATCGGT+CGG | - | chr5_2:25568688-25568707 | Msa0765080:intron | 50.0% | |
| TCCTGAAGGCGAGTTTCAGA+AGG | - | chr5_2:25568712-25568731 | Msa0765080:intron | 50.0% | |
| !! | ACCTTCTGAAACTCGCCTTC+AGG | + | chr5_2:25568716-25568735 | None:intergenic | 50.0% |
| AGCAGAAAATGCAGCAGAGG+CGG | - | chr5_2:25568820-25568839 | Msa0765080:intron | 50.0% | |
| TTGGTCTGCTCATGTTGGAC+TGG | + | chr5_2:25568848-25568867 | None:intergenic | 50.0% | |
| !! | GAGGATTGGTCTGCTCATGT+TGG | + | chr5_2:25568853-25568872 | None:intergenic | 50.0% |
| ACATGAGCAGACCAATCCTC+AGG | - | chr5_2:25568853-25568872 | Msa0765080:intron | 50.0% | |
| CATGAGCAGACCAATCCTCA+GGG | - | chr5_2:25568854-25568873 | Msa0765080:intron | 50.0% | |
| GACCAATCCTCAGGGTGATT+TGG | - | chr5_2:25568862-25568881 | Msa0765080:intron | 50.0% | |
| TCAACCAGATGGAGAGGGAA+AGG | - | chr5_2:25568892-25568911 | Msa0765080:intron | 50.0% | |
| !! | AGGAGCATCAGTACTACCCT+AGG | - | chr5_2:25568912-25568931 | Msa0765080:intron | 50.0% |
| AGCATCAGTACTACCCTAGG+AGG | - | chr5_2:25568915-25568934 | Msa0765080:intron | 50.0% | |
| GCATCAGTACTACCCTAGGA+GGG | - | chr5_2:25568916-25568935 | Msa0765080:intron | 50.0% | |
| CATCAGTACTACCCTAGGAG+GGG | - | chr5_2:25568917-25568936 | Msa0765080:intron | 50.0% | |
| ATCAGTACTACCCTAGGAGG+GGG | - | chr5_2:25568918-25568937 | Msa0765080:intron | 50.0% | |
| CAGAATCAAAGAGGTGGACG+CGG | - | chr5_2:25568947-25568966 | Msa0765080:intron | 50.0% | |
| GGAAGAGGTTACCCTAATGG+CGG | - | chr5_2:25569025-25569044 | Msa0765080:intron | 50.0% | |
| TACAGTAACCATGGTGCAGG+TGG | - | chr5_2:25569133-25569152 | Msa0765080:intron | 50.0% | |
| TAACTTGACCACCTGCACCA+TGG | + | chr5_2:25569144-25569163 | None:intergenic | 50.0% | |
| !! | GGCCGATTTTCAGAGCACAG+TGG | - | chr5_2:25564271-25564290 | Msa0765080:intron | 55.0% |
| TTTCAGCCCCCTCTATCTCC+AGG | + | chr5_2:25564476-25564495 | None:intergenic | 55.0% | |
| TCTTGGTTACGGGAAGAGGC+TGG | - | chr5_2:25564583-25564602 | Msa0765080:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | - | chr5_2:25564584-25564603 | Msa0765080:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | - | chr5_2:25564590-25564609 | Msa0765080:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | - | chr5_2:25564591-25564610 | Msa0765080:intron | 55.0% | |
| TTTGACCTTTGCCCCACGGT+GGG | + | chr5_2:25564910-25564929 | None:intergenic | 55.0% | |
| TCTGCTCGTGACATGGTGAC+CGG | + | chr5_2:25565074-25565093 | None:intergenic | 55.0% | |
| GGTCTTCTCTGCTCGTGACA+TGG | + | chr5_2:25565081-25565100 | None:intergenic | 55.0% | |
| ACGAGCAGAGAAGACCGAGA+TGG | - | chr5_2:25565085-25565104 | Msa0765080:intron | 55.0% | |
| AGCAGAGAAGACCGAGATGG+TGG | - | chr5_2:25565088-25565107 | Msa0765080:intron | 55.0% | |
| !! | GAAGACCGAGATGGTGGACA+AGG | - | chr5_2:25565094-25565113 | Msa0765080:intron | 55.0% |
| GGCCATCATGGAGCTACTTG+TGG | - | chr5_2:25565289-25565308 | Msa0765080:intron | 55.0% | |
| TGAGGTGCGTCTTGAGGATG+CGG | - | chr5_2:25565346-25565365 | Msa0765080:intron | 55.0% | |
| GGGAGTGATGCTTAGTGGAG+CGG | - | chr5_2:25565425-25565444 | Msa0765080:intron | 55.0% | |
| AGTGATGCTTAGTGGAGCGG+TGG | - | chr5_2:25565428-25565447 | Msa0765080:intron | 55.0% | |
| CACTCAACATCAGCCTGGAG+AGG | - | chr5_2:25565471-25565490 | Msa0765080:intron | 55.0% | |
| TCAACATCAGCCTGGAGAGG+CGG | - | chr5_2:25565474-25565493 | Msa0765080:intron | 55.0% | |
| ATTCTTACCACCGCCTCTCC+AGG | + | chr5_2:25565487-25565506 | None:intergenic | 55.0% | |
| !!! | TCTTTTCAGGTGCCGGTGCA+CGG | - | chr5_2:25565877-25565896 | Msa0765080:intron | 55.0% |
| TGTTGCAGGGGGGAACTGAT+AGG | - | chr5_2:25567025-25567044 | Msa0765080:intron | 55.0% | |
| !! | GAGGGTACCCTACATGTGGT+TGG | - | chr5_2:25567895-25567914 | Msa0765080:intron | 55.0% |
| TTGGCAATGTCCGCGCCATT+AGG | - | chr5_2:25568112-25568131 | Msa0765080:intron | 55.0% | |
| GATGATCGGTCGGATCCTGA+AGG | - | chr5_2:25568698-25568717 | Msa0765080:intron | 55.0% | |
| TGCTCCTTTCCCTCTCCATC+TGG | + | chr5_2:25568899-25568918 | None:intergenic | 55.0% | |
| TCAGTACTACCCTAGGAGGG+GGG | - | chr5_2:25568919-25568938 | Msa0765080:intron | 55.0% | |
| TCTGATAACCCCCCCTCCTA+GGG | + | chr5_2:25568931-25568950 | None:intergenic | 55.0% | |
| TTCTGATAACCCCCCCTCCT+AGG | + | chr5_2:25568932-25568951 | None:intergenic | 55.0% | |
| AATCAAAGAGGTGGACGCGG+TGG | - | chr5_2:25568950-25568969 | Msa0765080:intron | 55.0% | |
| TCAAATGGTCGTGGAGGTCG+TGG | - | chr5_2:25568992-25569011 | Msa0765080:intron | 55.0% | |
| !! | GGTGGCCGATTTGGTGAGCA+CGG | - | chr5_2:25564338-25564357 | Msa0765080:intron | 60.0% |
| GGCCACCGTGCTCACCAAAT+CGG | + | chr5_2:25564346-25564365 | None:intergenic | 60.0% | |
| ACAACAATTGGCGCCCACCG+TGG | - | chr5_2:25564894-25564913 | Msa0765080:intron | 60.0% | |
| CAACAATTGGCGCCCACCGT+GGG | - | chr5_2:25564895-25564914 | Msa0765080:intron | 60.0% | |
| AACAATTGGCGCCCACCGTG+GGG | - | chr5_2:25564896-25564915 | Msa0765080:intron | 60.0% | |
| CTTTGACCTTTGCCCCACGG+TGG | + | chr5_2:25564911-25564930 | None:intergenic | 60.0% | |
| CACCGTGGGGCAAAGGTCAA+AGG | - | chr5_2:25564909-25564928 | Msa0765080:intron | 60.0% | |
| !! | CCTGGCCTTGTCCACCATCT+CGG | + | chr5_2:25565102-25565121 | None:intergenic | 60.0% |
| GAGGTGCGTCTTGAGGATGC+GGG | - | chr5_2:25565347-25565366 | Msa0765080:intron | 60.0% | |
| TGAGGATGCGGGTGCTCTGA+TGG | - | chr5_2:25565358-25565377 | Msa0765080:intron | 60.0% | |
| ! | ATGCGGGTGCTCTGATGGTG+TGG | - | chr5_2:25565363-25565382 | Msa0765080:intron | 60.0% |
| TTAGTGGAGCGGTGGTCGTC+TGG | - | chr5_2:25565436-25565455 | Msa0765080:intron | 60.0% | |
| TGATCTGTCTGGAGAGGCGG+AGG | - | chr5_2:25565512-25565531 | Msa0765080:intron | 60.0% | |
| GGAGTTGAACACACCGGGAG+TGG | - | chr5_2:25565638-25565657 | Msa0765080:intron | 60.0% | |
| !! | TCCTGAAATGAAGGCGCCGG+TGG | - | chr5_2:25565822-25565841 | Msa0765080:intron | 60.0% |
| TCCACCGGCGCCTTCATTTC+AGG | + | chr5_2:25565826-25565845 | None:intergenic | 60.0% | |
| GCAGCTGCAGCAACTTCCAC+CGG | + | chr5_2:25565841-25565860 | None:intergenic | 60.0% | |
| GAAGTTGCTGCAGCTGCTGC+TGG | - | chr5_2:25565844-25565863 | Msa0765080:intron | 60.0% | |
| GAAGCCTCAGAACCGTGCAC+CGG | + | chr5_2:25565892-25565911 | None:intergenic | 60.0% | |
| CAGTACTACCCTAGGAGGGG+GGG | - | chr5_2:25568920-25568939 | Msa0765080:intron | 60.0% | |
| AATGGTCGTGGAGGTCGTGG+TGG | - | chr5_2:25568995-25569014 | Msa0765080:intron | 60.0% | |
| !! | CGTGGTGGTGGAAGAGGAAG+AGG | - | chr5_2:25569010-25569029 | Msa0765080:intron | 60.0% |
| AACAGAGGACGTGGGGGAAG+AGG | - | chr5_2:25569100-25569119 | Msa0765080:intron | 60.0% | |
| ! | ACCAGTGGCGGAGCTAGGCA+GGG | + | chr5_2:25563970-25563989 | None:intergenic | 65.0% |
| ! | AACCAGTGGCGGAGCTAGGC+AGG | + | chr5_2:25563971-25563990 | None:intergenic | 65.0% |
| !! | GGCCGATTTGGTGAGCACGG+TGG | - | chr5_2:25564341-25564360 | Msa0765080:intron | 65.0% |
| GCTGCTCTCTCCCCCAGACT+AGG | - | chr5_2:25564694-25564713 | Msa0765080:intron | 65.0% | |
| !! | CCGAGATGGTGGACAAGGCC+AGG | - | chr5_2:25565099-25565118 | Msa0765080:intron | 65.0% |
| ACATCAGCCTGGAGAGGCGG+TGG | - | chr5_2:25565477-25565496 | Msa0765080:intron | 65.0% | |
| CAAAGAGGTGGACGCGGTGG+AGG | - | chr5_2:25568953-25568972 | Msa0765080:intron | 65.0% | |
| ACGCGGTGGAGGTGGTAGGA+GGG | - | chr5_2:25568964-25568983 | Msa0765080:intron | 65.0% | |
| !! | GGAGGTCGTGGTGGTGGAAG+AGG | - | chr5_2:25569004-25569023 | Msa0765080:intron | 65.0% |
| AGAGGACGTGGGGGAAGAGG+TGG | - | chr5_2:25569103-25569122 | Msa0765080:intron | 65.0% | |
| TGGCGGAGCTAGGCAGGGAC+GGG | + | chr5_2:25563965-25563984 | None:intergenic | 70.0% | |
| ! | GTGGCGGAGCTAGGCAGGGA+CGG | + | chr5_2:25563966-25563985 | None:intergenic | 70.0% |
| TCCCTGCCTAGCTCCGCCAC+TGG | - | chr5_2:25563966-25563985 | Msa0765080:intron | 70.0% | |
| !! | GGTGCCGGTGCACGGTTCTG+AGG | - | chr5_2:25565885-25565904 | Msa0765080:intron | 70.0% |
| AGAGGTGGACGCGGTGGAGG+TGG | - | chr5_2:25568956-25568975 | Msa0765080:intron | 70.0% | |
| GTGGACGCGGTGGAGGTGGT+AGG | - | chr5_2:25568960-25568979 | Msa0765080:intron | 70.0% | |
| GACGCGGTGGAGGTGGTAGG+AGG | - | chr5_2:25568963-25568982 | Msa0765080:intron | 70.0% | |
| CGCGGTGGAGGTGGTAGGAG+GGG | - | chr5_2:25568965-25568984 | Msa0765080:intron | 70.0% | |
| GGTCGTGGAGGTCGTGGTGG+TGG | - | chr5_2:25568998-25569017 | Msa0765080:intron | 70.0% | |
| GGACGTGGGGGAAGAGGTGG+TGG | - | chr5_2:25569106-25569125 | Msa0765080:intron | 70.0% | |
| GAGCTAGGCAGGGACGGGGG+AGG | + | chr5_2:25563960-25563979 | None:intergenic | 75.0% | |
| GCGGAGCTAGGCAGGGACGG+GGG | + | chr5_2:25563963-25563982 | None:intergenic | 75.0% | |
| GGCGGAGCTAGGCAGGGACG+GGG | + | chr5_2:25563964-25563983 | None:intergenic | 75.0% | |
| TGGCGCCCACCGTGGGGCAA+AGG | - | chr5_2:25564902-25564921 | Msa0765080:intron | 75.0% | |
| ! | GGCAGGGACGGGGGAGGCCA+TGG | + | chr5_2:25563954-25563973 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 25563527 | 25569198 | 25563527 | ID=Msa0765080;Name=Msa0765080 |
| chr5_2 | mRNA | 25563527 | 25569198 | 25563527 | ID=Msa0765080-mRNA-1;Parent=Msa0765080;Name=Msa0765080-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|0.75|1|1|4|0|217 |
| chr5_2 | exon | 25569195 | 25569198 | 25569195 | ID=Msa0765080-mRNA-1:exon:10282;Parent=Msa0765080-mRNA-1 |
| chr5_2 | exon | 25566777 | 25566961 | 25566777 | ID=Msa0765080-mRNA-1:exon:10281;Parent=Msa0765080-mRNA-1 |
| chr5_2 | exon | 25563992 | 25564066 | 25563992 | ID=Msa0765080-mRNA-1:exon:10280;Parent=Msa0765080-mRNA-1 |
| chr5_2 | exon | 25563527 | 25563916 | 25563527 | ID=Msa0765080-mRNA-1:exon:10279;Parent=Msa0765080-mRNA-1 |
| chr5_2 | CDS | 25569195 | 25569198 | 25569195 | ID=Msa0765080-mRNA-1:cds;Parent=Msa0765080-mRNA-1 |
| chr5_2 | CDS | 25566777 | 25566961 | 25566777 | ID=Msa0765080-mRNA-1:cds;Parent=Msa0765080-mRNA-1 |
| chr5_2 | CDS | 25563992 | 25564066 | 25563992 | ID=Msa0765080-mRNA-1:cds;Parent=Msa0765080-mRNA-1 |
| chr5_2 | CDS | 25563527 | 25563916 | 25563527 | ID=Msa0765080-mRNA-1:cds;Parent=Msa0765080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
