Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980290 | XP_013451520.1 | 96.729 | 1009 | 29 | 1 | 1 | 1005 | 1 | 1009 | 0.0 | 2007 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980290 | sp|Q60EW9|FTIP7_ORYSJ | 51.373 | 765 | 326 | 13 | 267 | 1005 | 30 | 774 | 0.0 | 785 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980290 | A0A072U8X0 | 96.729 | 1009 | 29 | 1 | 1 | 1005 | 1 | 1009 | 0.0 | 2007 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0980290 | 0.807365 | 5.237895e-50 | -8.615850e-47 |
| Msa0016040 | Msa0980290 | 0.811904 | 5.544183e-51 | -8.615850e-47 |
| Msa0025160 | Msa0980290 | 0.829165 | 5.997436e-55 | -8.615850e-47 |
| Msa0029380 | Msa0980290 | 0.812271 | 4.610598e-51 | -8.615850e-47 |
| Msa0041850 | Msa0980290 | 0.818133 | 2.298114e-52 | -8.615850e-47 |
| Msa0044160 | Msa0980290 | 0.806590 | 7.639448e-50 | -8.615850e-47 |
| Msa0048510 | Msa0980290 | 0.832884 | 7.326918e-56 | -8.615850e-47 |
| Msa0050660 | Msa0980290 | 0.800330 | 1.515837e-48 | -8.615850e-47 |
| Msa0050700 | Msa0980290 | 0.802267 | 6.083981e-49 | -8.615850e-47 |
| Msa0050790 | Msa0980290 | 0.805951 | 1.041550e-49 | -8.615850e-47 |
| Msa0053070 | Msa0980290 | 0.814686 | 1.357642e-51 | -8.615850e-47 |
| Msa0062340 | Msa0980290 | 0.824188 | 9.241470e-54 | -8.615850e-47 |
| Msa0065020 | Msa0980290 | 0.830576 | 2.717251e-55 | -8.615850e-47 |
| Msa0072520 | Msa0980290 | 0.829844 | 4.100905e-55 | -8.615850e-47 |
| Msa0077340 | Msa0980290 | 0.848981 | 4.332928e-60 | -8.615850e-47 |
| Msa0077560 | Msa0980290 | 0.861272 | 1.152756e-63 | -8.615850e-47 |
| Msa0094780 | Msa0980290 | 0.820314 | 7.323461e-53 | -8.615850e-47 |
| Msa0094790 | Msa0980290 | 0.806393 | 8.409461e-50 | -8.615850e-47 |
| Msa0098410 | Msa0980290 | 0.805331 | 1.405644e-49 | -8.615850e-47 |
| Msa0110200 | Msa0980290 | 0.822524 | 2.262068e-53 | -8.615850e-47 |
| Msa0607800 | Msa0980290 | 0.862487 | 4.893863e-64 | -8.615850e-47 |
| Msa0621710 | Msa0980290 | 0.831051 | 2.077954e-55 | -8.615850e-47 |
| Msa0624900 | Msa0980290 | 0.821187 | 4.613479e-53 | -8.615850e-47 |
| Msa0641990 | Msa0980290 | 0.835856 | 1.314813e-56 | -8.615850e-47 |
| Msa0648040 | Msa0980290 | 0.846711 | 1.829214e-59 | -8.615850e-47 |
| Msa0658640 | Msa0980290 | 0.846574 | 1.994595e-59 | -8.615850e-47 |
| Msa0660370 | Msa0980290 | 0.808987 | 2.363431e-50 | -8.615850e-47 |
| Msa0666700 | Msa0980290 | 0.807148 | 5.823567e-50 | -8.615850e-47 |
| Msa0681050 | Msa0980290 | 0.810004 | 1.429871e-50 | -8.615850e-47 |
| Msa0682770 | Msa0980290 | 0.802323 | 5.925359e-49 | -8.615850e-47 |
| Msa0690740 | Msa0980290 | 0.833746 | 4.466840e-56 | -8.615850e-47 |
| Msa0703600 | Msa0980290 | 0.848244 | 6.933717e-60 | -8.615850e-47 |
| Msa0703950 | Msa0980290 | 0.817002 | 4.132231e-52 | -8.615850e-47 |
| Msa0709200 | Msa0980290 | 0.847489 | 1.119684e-59 | -8.615850e-47 |
| Msa0709440 | Msa0980290 | 0.870344 | 1.566954e-66 | -8.615850e-47 |
| Msa0714520 | Msa0980290 | 0.818248 | 2.164567e-52 | -8.615850e-47 |
| Msa0714790 | Msa0980290 | 0.816773 | 4.651390e-52 | -8.615850e-47 |
| Msa0716480 | Msa0980290 | 0.803725 | 3.039773e-49 | -8.615850e-47 |
| Msa0716890 | Msa0980290 | 0.802030 | 6.805217e-49 | -8.615850e-47 |
| Msa0722890 | Msa0980290 | 0.802097 | 6.595289e-49 | -8.615850e-47 |
| Msa0730930 | Msa0980290 | 0.819520 | 1.112546e-52 | -8.615850e-47 |
| Msa0735780 | Msa0980290 | 0.871552 | 6.263265e-67 | -8.615850e-47 |
| Msa0743440 | Msa0980290 | 0.833437 | 5.335345e-56 | -8.615850e-47 |
| Msa0747740 | Msa0980290 | 0.803144 | 4.010524e-49 | -8.615850e-47 |
| Msa0754430 | Msa0980290 | 0.859482 | 4.013289e-63 | -8.615850e-47 |
| Msa0754450 | Msa0980290 | 0.838660 | 2.519587e-57 | -8.615850e-47 |
| Msa0756820 | Msa0980290 | 0.800480 | 1.412790e-48 | -8.615850e-47 |
| Msa0773630 | Msa0980290 | 0.827603 | 1.428321e-54 | -8.615850e-47 |
| Msa0780910 | Msa0980290 | 0.851351 | 9.390467e-61 | -8.615850e-47 |
| Msa0787590 | Msa0980290 | 0.802507 | 5.428149e-49 | -8.615850e-47 |
| Msa0795870 | Msa0980290 | 0.812184 | 4.816746e-51 | -8.615850e-47 |
| Msa0804000 | Msa0980290 | 0.819112 | 1.377938e-52 | -8.615850e-47 |
| Msa0815970 | Msa0980290 | 0.820255 | 7.556348e-53 | -8.615850e-47 |
| Msa0818880 | Msa0980290 | 0.823772 | 1.157210e-53 | -8.615850e-47 |
| Msa0821160 | Msa0980290 | 0.837119 | 6.272258e-57 | -8.615850e-47 |
| Msa0824450 | Msa0980290 | 0.832457 | 9.351622e-56 | -8.615850e-47 |
| Msa0833650 | Msa0980290 | 0.807375 | 5.212003e-50 | -8.615850e-47 |
| Msa0837460 | Msa0980290 | 0.808221 | 3.445536e-50 | -8.615850e-47 |
| Msa0842070 | Msa0980290 | 0.805432 | 1.338831e-49 | -8.615850e-47 |
| Msa0120790 | Msa0980290 | 0.834893 | 2.303452e-56 | -8.615850e-47 |
| Msa0123070 | Msa0980290 | 0.851856 | 6.758691e-61 | -8.615850e-47 |
| Msa0124910 | Msa0980290 | 0.846465 | 2.135063e-59 | -8.615850e-47 |
| Msa0125360 | Msa0980290 | 0.828236 | 1.005493e-54 | -8.615850e-47 |
| Msa0127770 | Msa0980290 | 0.801911 | 7.199985e-49 | -8.615850e-47 |
| Msa0140280 | Msa0980290 | 0.806875 | 6.650106e-50 | -8.615850e-47 |
| Msa0142430 | Msa0980290 | 0.835811 | 1.350065e-56 | -8.615850e-47 |
| Msa0169410 | Msa0980290 | 0.812328 | 4.481109e-51 | -8.615850e-47 |
| Msa0181650 | Msa0980290 | 0.803053 | 4.188618e-49 | -8.615850e-47 |
| Msa0183710 | Msa0980290 | 0.821091 | 4.853515e-53 | -8.615850e-47 |
| Msa0185290 | Msa0980290 | 0.834908 | 2.283038e-56 | -8.615850e-47 |
| Msa0190570 | Msa0980290 | 0.804256 | 2.356829e-49 | -8.615850e-47 |
| Msa0190730 | Msa0980290 | 0.855254 | 7.136139e-62 | -8.615850e-47 |
| Msa0194630 | Msa0980290 | 0.808702 | 2.719556e-50 | -8.615850e-47 |
| Msa0204950 | Msa0980290 | 0.828074 | 1.100535e-54 | -8.615850e-47 |
| Msa0213030 | Msa0980290 | 0.803972 | 2.700890e-49 | -8.615850e-47 |
| Msa0225610 | Msa0980290 | 0.845567 | 3.745951e-59 | -8.615850e-47 |
| Msa0233020 | Msa0980290 | 0.844980 | 5.402722e-59 | -8.615850e-47 |
| Msa0367520 | Msa0980290 | 0.803450 | 3.466687e-49 | -8.615850e-47 |
| Msa0371270 | Msa0980290 | 0.801300 | 9.610044e-49 | -8.615850e-47 |
| Msa0373500 | Msa0980290 | 0.836243 | 1.049010e-56 | -8.615850e-47 |
| Msa0377710 | Msa0980290 | 0.822747 | 2.007772e-53 | -8.615850e-47 |
| Msa0380490 | Msa0980290 | 0.848562 | 5.661507e-60 | -8.615850e-47 |
| Msa0380670 | Msa0980290 | 0.813417 | 2.586842e-51 | -8.615850e-47 |
| Msa0409830 | Msa0980290 | 0.853902 | 1.757307e-61 | -8.615850e-47 |
| Msa0419540 | Msa0980290 | 0.814834 | 1.258884e-51 | -8.615850e-47 |
| Msa0421130 | Msa0980290 | 0.806233 | 9.086883e-50 | -8.615850e-47 |
| Msa0430000 | Msa0980290 | 0.836714 | 7.961118e-57 | -8.615850e-47 |
| Msa0430300 | Msa0980290 | 0.800837 | 1.195007e-48 | -8.615850e-47 |
| Msa0432010 | Msa0980290 | 0.863724 | 2.028889e-64 | -8.615850e-47 |
| Msa0436330 | Msa0980290 | 0.839390 | 1.630871e-57 | -8.615850e-47 |
| Msa0437520 | Msa0980290 | 0.806969 | 6.354786e-50 | -8.615850e-47 |
| Msa0440350 | Msa0980290 | 0.806153 | 9.447012e-50 | -8.615850e-47 |
| Msa0454560 | Msa0980290 | 0.815309 | 9.875078e-52 | -8.615850e-47 |
| Msa0462780 | Msa0980290 | 0.811985 | 5.322506e-51 | -8.615850e-47 |
| Msa0465530 | Msa0980290 | 0.809883 | 1.518316e-50 | -8.615850e-47 |
| Msa0466880 | Msa0980290 | 0.824496 | 7.820901e-54 | -8.615850e-47 |
| Msa0468620 | Msa0980290 | 0.818212 | 2.205379e-52 | -8.615850e-47 |
| Msa0468700 | Msa0980290 | 0.819853 | 9.337910e-53 | -8.615850e-47 |
| Msa0481890 | Msa0980290 | 0.871899 | 4.807937e-67 | -8.615850e-47 |
| Msa0980290 | Msa1002640 | 0.802250 | 6.134176e-49 | -8.615850e-47 |
| Msa0980290 | Msa1013350 | 0.816628 | 5.014115e-52 | -8.615850e-47 |
| Msa0980290 | Msa1035610 | 0.810378 | 1.187330e-50 | -8.615850e-47 |
| Msa0980290 | Msa1037540 | 0.813247 | 2.818709e-51 | -8.615850e-47 |
| Msa0980290 | Msa1042160 | 0.804982 | 1.663152e-49 | -8.615850e-47 |
| Msa0980290 | Msa1042190 | 0.806358 | 8.550569e-50 | -8.615850e-47 |
| Msa0980290 | Msa1042880 | 0.826491 | 2.634962e-54 | -8.615850e-47 |
| Msa0980290 | Msa1044250 | 0.805456 | 1.323436e-49 | -8.615850e-47 |
| Msa0980290 | Msa1074900 | 0.822732 | 2.023252e-53 | -8.615850e-47 |
| Msa0980290 | Msa1078830 | 0.804801 | 1.814357e-49 | -8.615850e-47 |
| Msa0980290 | Msa1084530 | 0.873069 | 1.955901e-67 | -8.615850e-47 |
| Msa0980290 | Msa1094010 | 0.822571 | 2.205474e-53 | -8.615850e-47 |
| Msa0980290 | Msa1104110 | 0.841667 | 4.134268e-58 | -8.615850e-47 |
| Msa0980290 | Msa1106590 | 0.802462 | 5.547382e-49 | -8.615850e-47 |
| Msa0980290 | Msa1114630 | 0.825348 | 4.922705e-54 | -8.615850e-47 |
| Msa0980290 | Msa1125820 | 0.869748 | 2.453490e-66 | -8.615850e-47 |
| Msa0980290 | Msa1125990 | 0.872378 | 3.331238e-67 | -8.615850e-47 |
| Msa0980290 | Msa1127470 | 0.803759 | 2.990082e-49 | -8.615850e-47 |
| Msa0980290 | Msa1130420 | 0.804816 | 1.801419e-49 | -8.615850e-47 |
| Msa0980290 | Msa1132530 | 0.859240 | 4.742855e-63 | -8.615850e-47 |
| Msa0980290 | Msa1132840 | 0.805816 | 1.111812e-49 | -8.615850e-47 |
| Msa0980290 | Msa1147700 | 0.841288 | 5.202421e-58 | -8.615850e-47 |
| Msa0980290 | Msa1147910 | 0.835473 | 1.643690e-56 | -8.615850e-47 |
| Msa0980290 | Msa1159590 | 0.819001 | 1.460201e-52 | -8.615850e-47 |
| Msa0980290 | Msa1162230 | 0.816337 | 5.825000e-52 | -8.615850e-47 |
| Msa0980290 | Msa1167470 | 0.807671 | 4.510772e-50 | -8.615850e-47 |
| Msa0980290 | Msa1169660 | 0.837458 | 5.137803e-57 | -8.615850e-47 |
| Msa0980290 | Msa1171290 | 0.869174 | 3.773123e-66 | -8.615850e-47 |
| Msa0980290 | Msa1173250 | 0.800947 | 1.134760e-48 | -8.615850e-47 |
| Msa0980290 | Msa1190390 | 0.816447 | 5.504047e-52 | -8.615850e-47 |
| Msa0980290 | Msa1192570 | 0.821262 | 4.434474e-53 | -8.615850e-47 |
| Msa0980290 | Msa1200890 | 0.818984 | 1.473834e-52 | -8.615850e-47 |
| Msa0980290 | Msa1201780 | 0.809607 | 1.740155e-50 | -8.615850e-47 |
| Msa0980290 | Msa1207330 | 0.801391 | 9.205953e-49 | -8.615850e-47 |
| Msa0980290 | Msa1211920 | 0.813928 | 1.997101e-51 | -8.615850e-47 |
| Msa0980290 | Msa1215870 | 0.832563 | 8.800015e-56 | -8.615850e-47 |
| Msa0980290 | Msa1216590 | 0.814893 | 1.221787e-51 | -8.615850e-47 |
| Msa0980290 | Msa1218820 | 0.844717 | 6.360359e-59 | -8.615850e-47 |
| Msa0980290 | Msa1223390 | 0.807242 | 5.562476e-50 | -8.615850e-47 |
| Msa0980290 | Msa1226520 | 0.840454 | 8.613927e-58 | -8.615850e-47 |
| Msa0980290 | Msa1244240 | 0.810169 | 1.317337e-50 | -8.615850e-47 |
| Msa0980290 | Msa1254540 | 0.839594 | 1.443123e-57 | -8.615850e-47 |
| Msa0980290 | Msa1262590 | 0.849367 | 3.383547e-60 | -8.615850e-47 |
| Msa0980290 | Msa1263780 | 0.830115 | 3.522711e-55 | -8.615850e-47 |
| Msa0980290 | Msa1294460 | 0.803109 | 4.077027e-49 | -8.615850e-47 |
| Msa0980290 | Msa1300460 | 0.800062 | 1.718763e-48 | -8.615850e-47 |
| Msa0980290 | Msa1306570 | 0.854006 | 1.640134e-61 | -8.615850e-47 |
| Msa0980290 | Msa1307630 | 0.816143 | 6.438410e-52 | -8.615850e-47 |
| Msa0980290 | Msa1332950 | 0.827764 | 1.306399e-54 | -8.615850e-47 |
| Msa0980290 | Msa1343180 | 0.818213 | 2.204704e-52 | -8.615850e-47 |
| Msa0980290 | Msa1362130 | 0.804702 | 1.903086e-49 | -8.615850e-47 |
| Msa0980290 | Msa1364680 | 0.823031 | 1.724242e-53 | -8.615850e-47 |
| Msa0980290 | Msa1366150 | 0.848599 | 5.529920e-60 | -8.615850e-47 |
| Msa0980290 | Msa1367180 | 0.809173 | 2.156646e-50 | -8.615850e-47 |
| Msa0980290 | Msa1368750 | 0.863519 | 2.349153e-64 | -8.615850e-47 |
| Msa0980290 | Msa1374790 | 0.861465 | 1.006738e-63 | -8.615850e-47 |
| Msa0980290 | Msa1375280 | 0.810880 | 9.250023e-51 | -8.615850e-47 |
| Msa0980290 | Msa1375350 | 0.844747 | 6.242777e-59 | -8.615850e-47 |
| Msa0980290 | Msa1380120 | 0.823727 | 1.185595e-53 | -8.615850e-47 |
| Msa0980290 | Msa1384150 | 0.851867 | 6.706699e-61 | -8.615850e-47 |
| Msa0980290 | Msa1387440 | 0.846549 | 2.025893e-59 | -8.615850e-47 |
| Msa0980290 | Msa1391500 | 0.836751 | 7.789634e-57 | -8.615850e-47 |
| Msa0980290 | Msa1393780 | 0.804582 | 2.015627e-49 | -8.615850e-47 |
| Msa0980290 | Msa1397270 | 0.845625 | 3.613720e-59 | -8.615850e-47 |
| Msa0980290 | Msa1398810 | 0.850094 | 2.120312e-60 | -8.615850e-47 |
| Msa0980290 | Msa1405460 | 0.842464 | 2.544797e-58 | -8.615850e-47 |
| Msa0980290 | Msa1407840 | 0.803094 | 4.107550e-49 | -8.615850e-47 |
| Msa0980290 | Msa1409410 | 0.825597 | 4.299044e-54 | -8.615850e-47 |
| Msa0980290 | Msa1414170 | 0.806389 | 8.423771e-50 | -8.615850e-47 |
| Msa0980290 | Msa1429070 | 0.856872 | 2.397490e-62 | -8.615850e-47 |
| Msa0980290 | Msa1437810 | 0.802657 | 5.056786e-49 | -8.615850e-47 |
| Msa0980290 | Msa1440630 | 0.807816 | 4.202448e-50 | -8.615850e-47 |
| Msa0980290 | Msa1441960 | 0.801390 | 9.208324e-49 | -8.615850e-47 |
| Msa0980290 | Msa1446100 | 0.805731 | 1.158775e-49 | -8.615850e-47 |
| Msa0980290 | Msa1447100 | 0.819475 | 1.138985e-52 | -8.615850e-47 |
| Msa0980290 | Msa1451820 | 0.863557 | 2.287365e-64 | -8.615850e-47 |
| Msa0980290 | Msa1454010 | 0.800246 | 1.576622e-48 | -8.615850e-47 |
| Msa0980290 | Msa1459010 | 0.813021 | 3.160752e-51 | -8.615850e-47 |
| Msa0241610 | Msa0980290 | 0.800914 | 1.152268e-48 | -8.615850e-47 |
| Msa0249850 | Msa0980290 | 0.812468 | 4.175221e-51 | -8.615850e-47 |
| Msa0269210 | Msa0980290 | 0.849627 | 2.864419e-60 | -8.615850e-47 |
| Msa0272260 | Msa0980290 | 0.814083 | 1.845710e-51 | -8.615850e-47 |
| Msa0274320 | Msa0980290 | 0.802762 | 4.809942e-49 | -8.615850e-47 |
| Msa0281470 | Msa0980290 | 0.832300 | 1.022807e-55 | -8.615850e-47 |
| Msa0307270 | Msa0980290 | 0.803018 | 4.258085e-49 | -8.615850e-47 |
| Msa0320600 | Msa0980290 | 0.831685 | 1.451073e-55 | -8.615850e-47 |
| Msa0330520 | Msa0980290 | 0.813335 | 2.696528e-51 | -8.615850e-47 |
| Msa0343010 | Msa0980290 | 0.813951 | 1.972986e-51 | -8.615850e-47 |
| Msa0354840 | Msa0980290 | 0.800453 | 1.431115e-48 | -8.615850e-47 |
| Msa0361910 | Msa0980290 | 0.850591 | 1.537798e-60 | -8.615850e-47 |
| Msa0495300 | Msa0980290 | 0.830312 | 3.152284e-55 | -8.615850e-47 |
| Msa0500570 | Msa0980290 | 0.839163 | 1.867481e-57 | -8.615850e-47 |
| Msa0500650 | Msa0980290 | 0.827850 | 1.245747e-54 | -8.615850e-47 |
| Msa0502510 | Msa0980290 | 0.829863 | 4.057118e-55 | -8.615850e-47 |
| Msa0514500 | Msa0980290 | 0.817021 | 4.093308e-52 | -8.615850e-47 |
| Msa0514580 | Msa0980290 | 0.831679 | 1.456106e-55 | -8.615850e-47 |
| Msa0517250 | Msa0980290 | 0.801466 | 8.884798e-49 | -8.615850e-47 |
| Msa0519810 | Msa0980290 | 0.802446 | 5.588641e-49 | -8.615850e-47 |
| Msa0520870 | Msa0980290 | 0.827477 | 1.530856e-54 | -8.615850e-47 |
| Msa0529030 | Msa0980290 | 0.840454 | 8.609930e-58 | -8.615850e-47 |
| Msa0531960 | Msa0980290 | 0.821572 | 3.759502e-53 | -8.615850e-47 |
| Msa0545920 | Msa0980290 | 0.805974 | 1.030201e-49 | -8.615850e-47 |
| Msa0550590 | Msa0980290 | 0.809682 | 1.676816e-50 | -8.615850e-47 |
| Msa0567170 | Msa0980290 | 0.842970 | 1.867121e-58 | -8.615850e-47 |
| Msa0574900 | Msa0980290 | 0.817781 | 2.759363e-52 | -8.615850e-47 |
| Msa0580370 | Msa0980290 | 0.809263 | 2.062549e-50 | -8.615850e-47 |
| Msa0588920 | Msa0980290 | 0.831235 | 1.872804e-55 | -8.615850e-47 |
| Msa0590200 | Msa0980290 | 0.824350 | 8.467172e-54 | -8.615850e-47 |
| Msa0591170 | Msa0980290 | 0.813088 | 3.054949e-51 | -8.615850e-47 |
| Msa0601720 | Msa0980290 | 0.808416 | 3.130439e-50 | -8.615850e-47 |
| Msa0850690 | Msa0980290 | 0.813153 | 2.956244e-51 | -8.615850e-47 |
| Msa0851300 | Msa0980290 | 0.829457 | 5.093062e-55 | -8.615850e-47 |
| Msa0863620 | Msa0980290 | 0.815960 | 7.072247e-52 | -8.615850e-47 |
| Msa0865420 | Msa0980290 | 0.803639 | 3.167355e-49 | -8.615850e-47 |
| Msa0867110 | Msa0980290 | 0.800243 | 1.579061e-48 | -8.615850e-47 |
| Msa0878280 | Msa0980290 | 0.873821 | 1.092536e-67 | -8.615850e-47 |
| Msa0879920 | Msa0980290 | 0.809076 | 2.262851e-50 | -8.615850e-47 |
| Msa0888790 | Msa0980290 | 0.811374 | 7.228624e-51 | -8.615850e-47 |
| Msa0901120 | Msa0980290 | 0.807692 | 4.465206e-50 | -8.615850e-47 |
| Msa0915520 | Msa0980290 | 0.801119 | 1.046428e-48 | -8.615850e-47 |
| Msa0931590 | Msa0980290 | 0.802286 | 6.028719e-49 | -8.615850e-47 |
| Msa0944010 | Msa0980290 | 0.927267 | 1.491837e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980290 | MtrunA17_Chr6g0460791 | 96.729 | 1009 | 29 | 1 | 1 | 1005 | 1 | 1009 | 0.0 | 2007 |
| Msa0980290 | MtrunA17_Chr4g0060191 | 45.695 | 1057 | 482 | 20 | 8 | 1005 | 15 | 1038 | 0.0 | 896 |
| Msa0980290 | MtrunA17_Chr5g0397601 | 44.123 | 1038 | 502 | 22 | 11 | 1005 | 5 | 1007 | 0.0 | 853 |
| Msa0980290 | MtrunA17_Chr6g0461151 | 43.519 | 1057 | 509 | 27 | 6 | 1005 | 1 | 1026 | 0.0 | 835 |
| Msa0980290 | MtrunA17_Chr8g0349231 | 41.619 | 1050 | 507 | 21 | 11 | 1005 | 5 | 1003 | 0.0 | 810 |
| Msa0980290 | MtrunA17_Chr7g0258331 | 51.172 | 768 | 326 | 13 | 267 | 1005 | 28 | 775 | 0.0 | 781 |
| Msa0980290 | MtrunA17_Chr1g0174761 | 51.503 | 765 | 326 | 12 | 267 | 1005 | 29 | 774 | 0.0 | 778 |
| Msa0980290 | MtrunA17_Chr1g0174581 | 48.831 | 770 | 345 | 14 | 267 | 1005 | 46 | 797 | 0.0 | 745 |
| Msa0980290 | MtrunA17_Chr4g0033151 | 49.675 | 769 | 344 | 15 | 259 | 1005 | 23 | 770 | 0.0 | 741 |
| Msa0980290 | MtrunA17_Chr3g0087501 | 45.952 | 840 | 393 | 17 | 205 | 1005 | 5 | 822 | 0.0 | 735 |
| Msa0980290 | MtrunA17_Chr4g0010751 | 48.828 | 768 | 346 | 14 | 267 | 1005 | 445 | 1194 | 0.0 | 734 |
| Msa0980290 | MtrunA17_Chr4g0010751 | 46.512 | 129 | 69 | 0 | 11 | 139 | 2 | 130 | 8.15e-29 | 125 |
| Msa0980290 | MtrunA17_Chr4g0014711 | 47.906 | 764 | 355 | 11 | 267 | 1005 | 299 | 1044 | 0.0 | 716 |
| Msa0980290 | MtrunA17_Chr4g0014711 | 41.085 | 129 | 66 | 4 | 9 | 134 | 1 | 122 | 7.00e-18 | 89.4 |
| Msa0980290 | MtrunA17_Chr7g0247271 | 47.660 | 705 | 320 | 12 | 329 | 1005 | 283 | 966 | 0.0 | 650 |
| Msa0980290 | MtrunA17_Chr7g0247271 | 25.000 | 628 | 320 | 26 | 7 | 533 | 78 | 655 | 5.00e-28 | 122 |
| Msa0980290 | MtrunA17_Chr4g0028371 | 42.179 | 780 | 393 | 14 | 258 | 1005 | 30 | 783 | 0.0 | 604 |
| Msa0980290 | MtrunA17_Chr4g0035961 | 40.641 | 780 | 354 | 15 | 258 | 1005 | 30 | 732 | 0.0 | 584 |
| Msa0980290 | MtrunA17_Chr1g0151051 | 40.365 | 768 | 392 | 16 | 270 | 999 | 53 | 792 | 1.00e-172 | 524 |
| Msa0980290 | MtrunA17_Chr5g0447321 | 34.034 | 761 | 452 | 15 | 271 | 1005 | 27 | 763 | 3.48e-142 | 443 |
| Msa0980290 | MtrunA17_Chr4g0010641 | 51.538 | 130 | 61 | 1 | 875 | 1004 | 1 | 128 | 2.79e-40 | 144 |
| Msa0980290 | MtrunA17_Chr6g0461171 | 48.951 | 143 | 72 | 1 | 6 | 147 | 1 | 143 | 3.53e-40 | 147 |
| Msa0980290 | MtrunA17_Chr4g0010701 | 41.489 | 94 | 33 | 1 | 888 | 981 | 26 | 97 | 2.88e-16 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980290 | AT3G03680.1 | 69.659 | 1025 | 270 | 15 | 9 | 1005 | 6 | 1017 | 0.0 | 1399 |
| Msa0980290 | AT4G11610.2 | 43.877 | 1037 | 514 | 18 | 6 | 1005 | 2 | 1007 | 0.0 | 860 |
| Msa0980290 | AT4G11610.1 | 43.912 | 1043 | 509 | 20 | 6 | 1005 | 2 | 1011 | 0.0 | 860 |
| Msa0980290 | AT5G17980.1 | 42.844 | 1083 | 502 | 29 | 6 | 1005 | 1 | 1049 | 0.0 | 835 |
| Msa0980290 | AT5G48060.1 | 43.318 | 1055 | 514 | 21 | 11 | 1005 | 6 | 1036 | 0.0 | 831 |
| Msa0980290 | AT1G04150.1 | 43.659 | 1033 | 512 | 20 | 11 | 1005 | 12 | 1012 | 0.0 | 820 |
| Msa0980290 | AT1G22610.1 | 41.500 | 1053 | 536 | 18 | 9 | 1005 | 1 | 1029 | 0.0 | 797 |
| Msa0980290 | AT3G57880.4 | 50.850 | 765 | 330 | 13 | 267 | 1005 | 29 | 773 | 0.0 | 774 |
| Msa0980290 | AT3G57880.2 | 50.850 | 765 | 330 | 13 | 267 | 1005 | 29 | 773 | 0.0 | 774 |
| Msa0980290 | AT3G57880.3 | 50.850 | 765 | 330 | 13 | 267 | 1005 | 29 | 773 | 0.0 | 774 |
| Msa0980290 | AT3G57880.1 | 50.850 | 765 | 330 | 13 | 267 | 1005 | 29 | 773 | 0.0 | 774 |
| Msa0980290 | AT5G12970.1 | 50.593 | 759 | 336 | 12 | 267 | 1005 | 30 | 769 | 0.0 | 772 |
| Msa0980290 | AT1G74720.1 | 51.292 | 774 | 319 | 14 | 270 | 1005 | 328 | 1081 | 0.0 | 770 |
| Msa0980290 | AT1G51570.1 | 48.892 | 767 | 345 | 12 | 267 | 1005 | 29 | 776 | 0.0 | 754 |
| Msa0980290 | AT4G11610.3 | 48.768 | 771 | 350 | 13 | 260 | 1005 | 124 | 874 | 0.0 | 746 |
| Msa0980290 | AT4G00700.1 | 39.962 | 1041 | 540 | 21 | 11 | 1005 | 5 | 1006 | 0.0 | 737 |
| Msa0980290 | AT4G00700.2 | 39.962 | 1041 | 540 | 21 | 11 | 1005 | 5 | 1006 | 0.0 | 737 |
| Msa0980290 | AT5G06850.1 | 48.119 | 771 | 348 | 14 | 267 | 1005 | 44 | 794 | 0.0 | 726 |
| Msa0980290 | AT3G61300.1 | 39.883 | 1023 | 541 | 24 | 6 | 1005 | 1 | 972 | 0.0 | 707 |
| Msa0980290 | AT4G20080.1 | 46.184 | 760 | 367 | 13 | 267 | 1005 | 36 | 774 | 0.0 | 669 |
| Msa0980290 | AT3G61720.1 | 33.960 | 798 | 429 | 23 | 267 | 1002 | 31 | 792 | 7.15e-126 | 402 |
| Msa0980290 | AT5G03435.1 | 35.640 | 766 | 405 | 27 | 267 | 999 | 30 | 740 | 1.76e-123 | 394 |
| Msa0980290 | AT5G03435.2 | 36.508 | 567 | 292 | 19 | 267 | 805 | 30 | 556 | 1.65e-95 | 313 |
| Msa0980290 | AT5G44760.1 | 39.175 | 388 | 185 | 13 | 258 | 636 | 19 | 364 | 2.05e-68 | 237 |
Find 239 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGCTGTGCCGTTTAA+AGG | 0.159382 | 6_4:+18298032 | Msa0980290:CDS |
| AGGATTGAATTCAACTTCTT+TGG | 0.217940 | 6_4:+18295741 | Msa0980290:CDS |
| TCTGCTGGAGTTTCTTCTTT+TGG | 0.221387 | 6_4:-18295346 | None:intergenic |
| GTCCTGGTTCGAACCCATTT+TGG | 0.222050 | 6_4:-18297051 | None:intergenic |
| AGCTCGGTCTGAACCGGCTT+TGG | 0.243409 | 6_4:+18297467 | Msa0980290:CDS |
| GATTGGAAGCTTTGTTTAGT+TGG | 0.245110 | 6_4:+18297952 | Msa0980290:CDS |
| GTTTAAAGGGTTTGTGCTTT+TGG | 0.255765 | 6_4:+18298046 | Msa0980290:CDS |
| CAGCTGGGTTTGAGTGGTTT+GGG | 0.261974 | 6_4:+18296102 | Msa0980290:CDS |
| CATATCCGTGCTTGTTTAGA+AGG | 0.272163 | 6_4:+18296841 | Msa0980290:CDS |
| TGTTCCACGTGTCCCATCTT+TGG | 0.298005 | 6_4:-18296998 | None:intergenic |
| ACAGCTGGGTTTGAGTGGTT+TGG | 0.306154 | 6_4:+18296101 | Msa0980290:CDS |
| GAGGAAAATCTTTCTTATAC+AGG | 0.314202 | 6_4:+18296411 | Msa0980290:CDS |
| TAATATGATTTGAGCTACTT+TGG | 0.314910 | 6_4:+18298294 | Msa0980290:three_prime_UTR |
| TAATGCATTCTTGGTAGAAT+TGG | 0.316598 | 6_4:-18297372 | None:intergenic |
| GATAGGGTGCGTGCTCTTGC+GGG | 0.324280 | 6_4:+18297885 | Msa0980290:CDS |
| CCCGACGTGGAATGAAGATT+TGG | 0.330917 | 6_4:+18296224 | Msa0980290:CDS |
| TCCGGTGCAGGCGGAATTGC+CGG | 0.332209 | 6_4:-18295394 | None:intergenic |
| GGTTTAACGTAATGCATTCT+TGG | 0.333224 | 6_4:-18297381 | None:intergenic |
| GCGAATTGGTTTAGATTAGT+TGG | 0.335655 | 6_4:+18297555 | Msa0980290:CDS |
| GTTTCAAATTCAAGATCAAT+TGG | 0.341775 | 6_4:+18296300 | Msa0980290:CDS |
| TCACCGACTGATTTGGTTAC+CGG | 0.343612 | 6_4:-18295235 | None:intergenic |
| GTGGTCTGAATGTGTATAAA+AGG | 0.343755 | 6_4:+18298358 | Msa0980290:three_prime_UTR |
| GCTCGGTCTGAACCGGCTTT+GGG | 0.345208 | 6_4:+18297468 | Msa0980290:CDS |
| CTCACCATCACCGACTGATT+TGG | 0.346379 | 6_4:-18295242 | None:intergenic |
| TCACCGGCTGGTTCGGTAAC+CGG | 0.351921 | 6_4:-18295283 | None:intergenic |
| GCTTATGTGGTGGCGAAATA+TGG | 0.356278 | 6_4:+18297027 | Msa0980290:CDS |
| AGTAGTTTAATTAGTACTTA+AGG | 0.358100 | 6_4:+18298208 | Msa0980290:three_prime_UTR |
| TCTATATGTTCGCGTTGTTA+AGG | 0.359422 | 6_4:+18295588 | Msa0980290:CDS |
| TGGCGAAATATGGTCCAAAA+TGG | 0.360595 | 6_4:+18297037 | Msa0980290:CDS |
| GTGAAAATGAAGGTAAAGAT+TGG | 0.376505 | 6_4:+18295692 | Msa0980290:CDS |
| TGAACTAAAACCGTTGTTGC+CGG | 0.377060 | 6_4:-18297639 | None:intergenic |
| AGGGTCTGAATGTGTATAAA+AGG | 0.377898 | 6_4:+18298378 | Msa0980290:three_prime_UTR |
| CTTCTCATCACCGGCTGGTT+CGG | 0.382135 | 6_4:-18295290 | None:intergenic |
| TCCAGATGGTTTAATCTTTG+TGG | 0.382847 | 6_4:+18296384 | Msa0980290:CDS |
| GAGTCGTGGCAGTCGGATTC+CGG | 0.386228 | 6_4:+18295991 | Msa0980290:CDS |
| TTAGGAAAAGTTAAAATCTC+TGG | 0.386303 | 6_4:+18295034 | Msa0980290:CDS |
| ATCCTCGGATCCATGTTCTT+TGG | 0.388714 | 6_4:-18297768 | None:intergenic |
| GATGCTGAAAATGAGGAAAA+AGG | 0.390152 | 6_4:+18298323 | Msa0980290:three_prime_UTR |
| AATATGATTTGAGCTACTTT+GGG | 0.390454 | 6_4:+18298295 | Msa0980290:three_prime_UTR |
| CCAATTGGTTTACTTGAAGT+TGG | 0.392682 | 6_4:+18296940 | Msa0980290:CDS |
| TCTATGCTGTGCCGTTTAAA+GGG | 0.398920 | 6_4:+18298033 | Msa0980290:CDS |
| TCACCGGCTGAATCGGTAAC+AGG | 0.400370 | 6_4:-18295178 | None:intergenic |
| CAATTGGTTTACTTGAAGTT+GGG | 0.401660 | 6_4:+18296941 | Msa0980290:CDS |
| GATTGGCGACGTTGCAGCCC+AGG | 0.404597 | 6_4:+18297923 | Msa0980290:CDS |
| CTGTGGAAGTGGTTCGAATC+AGG | 0.410881 | 6_4:+18297859 | Msa0980290:CDS |
| TTTACTATCCGTTAGAGAAA+AGG | 0.414602 | 6_4:+18295092 | Msa0980290:CDS |
| ATGACGTTATGATTGCAGTA+TGG | 0.419939 | 6_4:+18295938 | Msa0980290:CDS |
| GTATACCATTGCGGTGCTAA+TGG | 0.421746 | 6_4:-18295889 | None:intergenic |
| TGCAGCCCAGGGTGAGAGAT+TGG | 0.421788 | 6_4:+18297935 | Msa0980290:CDS |
| CCAGCTGTAAATCCTGGGTT+TGG | 0.421812 | 6_4:-18296086 | None:intergenic |
| GGGAGGGCACAAAGTTTGAT+TGG | 0.422832 | 6_4:+18297906 | Msa0980290:CDS |
| GATGTTTGCGATATTCTGTT+TGG | 0.424069 | 6_4:+18297995 | Msa0980290:CDS |
| GAGTCCTGAACTTTATGTTA+AGG | 0.424579 | 6_4:+18296143 | Msa0980290:CDS |
| TGAGGAAAAGTAAAGCGAAT+TGG | 0.426414 | 6_4:+18297541 | Msa0980290:CDS |
| GGTGCGTGCTCTTGCGGGGA+GGG | 0.427713 | 6_4:+18297890 | Msa0980290:CDS |
| TAAACCTTCGCTCGTGTCTC+CGG | 0.428687 | 6_4:-18296024 | None:intergenic |
| AATTCGCACGTGGGTGAATC+CGG | 0.433417 | 6_4:+18297620 | Msa0980290:CDS |
| CTACGTGGACATGGTAAGTT+TGG | 0.434355 | 6_4:+18297794 | Msa0980290:CDS |
| CTCAAAACATCTTGCTGACC+CGG | 0.437003 | 6_4:-18297411 | None:intergenic |
| ATTGATGAATTATTTGATTG+AGG | 0.438601 | 6_4:-18294734 | None:intergenic |
| AGTTCAGGACTCCGAACCTT+AGG | 0.439184 | 6_4:-18296132 | None:intergenic |
| GGTTCAGTTCATGCTTGATT+CGG | 0.439464 | 6_4:+18297500 | Msa0980290:CDS |
| TCGTTTAGCTCGGTCTGAAC+CGG | 0.441535 | 6_4:+18297461 | Msa0980290:CDS |
| ACATCCTTCGTTTCAGCTAC+CGG | 0.443201 | 6_4:-18295430 | None:intergenic |
| TCAAACCCAGCTGTAAATCC+TGG | 0.444324 | 6_4:-18296092 | None:intergenic |
| ACTTCCACAGACCTCATTGT+TGG | 0.444809 | 6_4:-18297846 | None:intergenic |
| ACTGTTGGTAGAATCAAATA+AGG | 0.446566 | 6_4:-18297690 | None:intergenic |
| GTCAATGACCTCTGAGACGA+TGG | 0.447157 | 6_4:+18294961 | Msa0980290:CDS |
| CGATAGGGTGCGTGCTCTTG+CGG | 0.447912 | 6_4:+18297884 | Msa0980290:CDS |
| CCAAACCCAGGATTTACAGC+TGG | 0.448616 | 6_4:+18296086 | Msa0980290:CDS |
| CCAAATCTTCATTCCACGTC+GGG | 0.451724 | 6_4:-18296224 | None:intergenic |
| CAAGAGATTTGAATCCTCAA+TGG | 0.452098 | 6_4:+18294903 | Msa0980290:CDS |
| TGCGGTGCTAATGGACTATC+CGG | 0.452139 | 6_4:-18295880 | None:intergenic |
| GAACTTGATGAAGAGTTTGA+TGG | 0.452182 | 6_4:+18297819 | Msa0980290:CDS |
| TTTCAAATTCAAGATCAATT+GGG | 0.452813 | 6_4:+18296301 | Msa0980290:CDS |
| TGGAGCAACGAATCTTCTTC+CGG | 0.452951 | 6_4:+18296969 | Msa0980290:CDS |
| CTTCTTTGGAAGTTTCCGTT+TGG | 0.454691 | 6_4:+18295755 | Msa0980290:CDS |
| TTATGATTGCAGTATGGATT+GGG | 0.454958 | 6_4:+18295944 | Msa0980290:CDS |
| AACAATGAGGTCTGTGGAAG+TGG | 0.457588 | 6_4:+18297848 | Msa0980290:CDS |
| CTTCCGGTGAAAACCAAAGA+TGG | 0.459935 | 6_4:+18296985 | Msa0980290:CDS |
| ACCACAAAGATTAAACCATC+TGG | 0.460899 | 6_4:-18296385 | None:intergenic |
| TGAGCCTTAACATAAAGTTC+AGG | 0.461491 | 6_4:-18296147 | None:intergenic |
| TAAGGCTCAGCTTGGTGCAC+AGG | 0.461853 | 6_4:+18296161 | Msa0980290:CDS |
| TGAGGTTTAGGAACAGAATG+AGG | 0.463797 | 6_4:+18297742 | Msa0980290:CDS |
| TTCATGGCTGAGTTTAATGC+AGG | 0.464148 | 6_4:+18297338 | Msa0980290:CDS |
| TTACTTGAAGTTGGGATTCG+TGG | 0.464302 | 6_4:+18296949 | Msa0980290:CDS |
| GATGCTAGAGATGTCAGAAT+GGG | 0.466489 | 6_4:+18297183 | Msa0980290:CDS |
| TGAAAATGAAGGTAAAGATT+GGG | 0.466816 | 6_4:+18295693 | Msa0980290:CDS |
| ACAACGCGAACATATAGAAA+TGG | 0.467257 | 6_4:-18295583 | None:intergenic |
| CATTCCATCTCGGGTTAAAC+CGG | 0.467359 | 6_4:-18297083 | None:intergenic |
| GTGTATTGCTCATTCCATCT+CGG | 0.471544 | 6_4:-18297093 | None:intergenic |
| TGTATTGCTCATTCCATCTC+GGG | 0.473085 | 6_4:-18297092 | None:intergenic |
| GCTGTTCCTTGACCGTCTTT+CGG | 0.475271 | 6_4:-18294824 | None:intergenic |
| TCTCAGATTAAAGGTGAACT+TGG | 0.475536 | 6_4:+18295124 | Msa0980290:CDS |
| CCAACTTCAAGTAAACCAAT+TGG | 0.475732 | 6_4:-18296940 | None:intergenic |
| CTGAGGCATCCGAGGTTTCG+TGG | 0.481796 | 6_4:+18298083 | Msa0980290:CDS |
| TGGTTTGGGCTCCGAACCTA+AGG | 0.482818 | 6_4:+18296116 | Msa0980290:CDS |
| ATTCTGTTTGGTAATGTCGT+TGG | 0.483815 | 6_4:+18298007 | Msa0980290:CDS |
| ACCGGCAATTCCGCCTGCAC+CGG | 0.485309 | 6_4:+18295393 | Msa0980290:CDS |
| TGAAGGTAAAGATTGGGATC+AGG | 0.487382 | 6_4:+18295699 | Msa0980290:CDS |
| AAAAGCACAAACCCTTTAAA+CGG | 0.491505 | 6_4:-18298044 | None:intergenic |
| ATGCATTACGTTAAACCATT+CGG | 0.491777 | 6_4:+18297387 | Msa0980290:CDS |
| GCCAGGTGGTGCGAGGAGAA+TGG | 0.497164 | 6_4:+18297281 | Msa0980290:CDS |
| GATTTACAGCTGGGTTTGAG+TGG | 0.498424 | 6_4:+18296096 | Msa0980290:CDS |
| GGCGAAATATGGTCCAAAAT+GGG | 0.500863 | 6_4:+18297038 | Msa0980290:CDS |
| TGGGCTCCGAACCTAAGGTT+CGG | 0.502057 | 6_4:+18296121 | Msa0980290:CDS |
| CCCATTCTCCTCGCACCACC+TGG | 0.502706 | 6_4:-18297282 | None:intergenic |
| CGACGGAAGTAGTTTCTGTA+AGG | 0.503747 | 6_4:+18294762 | Msa0980290:CDS |
| GGCAATTCCGCCTGCACCGG+AGG | 0.503883 | 6_4:+18295396 | Msa0980290:CDS |
| ATAACTAGAAACGGTTCAAA+CGG | 0.505478 | 6_4:-18296264 | None:intergenic |
| AGCTTCCAATCTCTCACCCT+GGG | 0.505653 | 6_4:-18297940 | None:intergenic |
| AAGAGATTTGAATCCTCAAT+GGG | 0.506511 | 6_4:+18294904 | Msa0980290:CDS |
| CAGTTAACGAAGCCTCCAAT+TGG | 0.508014 | 6_4:+18296925 | Msa0980290:CDS |
| GGATTAACAACCTCCGGTGC+AGG | 0.508272 | 6_4:-18295406 | None:intergenic |
| AGCAGAGAAAACTCCGGCAC+CGG | 0.509315 | 6_4:+18295363 | Msa0980290:CDS |
| TCTAATGTAATAACTAGAAA+CGG | 0.512939 | 6_4:-18296273 | None:intergenic |
| ACCGGTGGATTAACAACCTC+CGG | 0.513220 | 6_4:-18295412 | None:intergenic |
| CAAACCCAGGATTTACAGCT+GGG | 0.518498 | 6_4:+18296087 | Msa0980290:CDS |
| AGGACTCCGAACCTTAGGTT+CGG | 0.519500 | 6_4:-18296127 | None:intergenic |
| CTTGAATCGGAAAATTCACC+GGG | 0.520754 | 6_4:+18295913 | Msa0980290:CDS |
| AGTCTCAAATACCACAGCTT+CGG | 0.527472 | 6_4:-18296054 | None:intergenic |
| GTCCAAAATGGGTTCGAACC+AGG | 0.527862 | 6_4:+18297049 | Msa0980290:CDS |
| TAAAAGGTTACCGTTGATTG+TGG | 0.528483 | 6_4:+18298394 | Msa0980290:three_prime_UTR |
| CCAGGTGGTGCGAGGAGAAT+GGG | 0.529733 | 6_4:+18297282 | Msa0980290:CDS |
| TGATTCTGATTCTAACCAAA+CGG | 0.529918 | 6_4:-18295770 | None:intergenic |
| GGATTCCGGTGGTTTGATAC+CGG | 0.531419 | 6_4:+18296005 | Msa0980290:CDS |
| GTTATGATTGCAGTATGGAT+TGG | 0.533211 | 6_4:+18295943 | Msa0980290:CDS |
| ATTGGCGACGTTGCAGCCCA+GGG | 0.533947 | 6_4:+18297924 | Msa0980290:CDS |
| TCTCAGAGGTCATTGACTCT+TGG | 0.535745 | 6_4:-18294955 | None:intergenic |
| AAACAAAGAGAAACAAATAA+CGG | 0.536178 | 6_4:+18295801 | Msa0980290:CDS |
| TCCACCGGTAGCTGAAACGA+AGG | 0.537813 | 6_4:+18295426 | Msa0980290:CDS |
| TTACGTTAAACCATTCGGCC+CGG | 0.538338 | 6_4:+18297392 | Msa0980290:CDS |
| AGATGCTAGAGATGTCAGAA+TGG | 0.539326 | 6_4:+18297182 | Msa0980290:CDS |
| TCCATGTGGCGTCGATCGAG+AGG | 0.541235 | 6_4:+18296334 | Msa0980290:CDS |
| ACTTCAAGTAAACCAATTGG+AGG | 0.542639 | 6_4:-18296937 | None:intergenic |
| ACCGGCTTTGGGTTCAGAAG+TGG | 0.542962 | 6_4:+18297479 | Msa0980290:CDS |
| TGGTTCGAATCAGGTACGAT+AGG | 0.544765 | 6_4:+18297868 | Msa0980290:CDS |
| GGGTGCGTGCTCTTGCGGGG+AGG | 0.546936 | 6_4:+18297889 | Msa0980290:CDS |
| TACGTTAAACCATTCGGCCC+GGG | 0.548307 | 6_4:+18297393 | Msa0980290:CDS |
| AGAAGAAAATACAAAAGAAG+AGG | 0.548452 | 6_4:+18295318 | Msa0980290:CDS |
| CTTTATGTTAAGGCTCAGCT+TGG | 0.551843 | 6_4:+18296153 | Msa0980290:CDS |
| TAGTAACGGCTCGTTTAGCT+CGG | 0.551888 | 6_4:+18297451 | Msa0980290:CDS |
| CCAATTGTTAAAACTGTGCA+AGG | 0.552185 | 6_4:-18297132 | None:intergenic |
| TTAACTGCTTCGCAGAAGCA+CGG | 0.552505 | 6_4:-18296909 | None:intergenic |
| ACCACTTCTGAACCCAAAGC+CGG | 0.553210 | 6_4:-18297480 | None:intergenic |
| TCTTGCTGACCCGGGCCGAA+TGG | 0.553912 | 6_4:-18297402 | None:intergenic |
| GTTTAATCTTTGTGGTTCAG+AGG | 0.554034 | 6_4:+18296392 | Msa0980290:CDS |
| TGGAACAACTGATGCTTATG+TGG | 0.556975 | 6_4:+18297014 | Msa0980290:CDS |
| TCGAGTTTCTCGTCCCATTG+AGG | 0.558223 | 6_4:-18294917 | None:intergenic |
| CGACTCCTGAAAAGCTTCAT+CGG | 0.561784 | 6_4:-18295974 | None:intergenic |
| GAACCAGGACTGTTGTAGAC+CGG | 0.567577 | 6_4:+18297064 | Msa0980290:CDS |
| TGGTCTGAATGTGTATAAAA+GGG | 0.568281 | 6_4:+18298359 | Msa0980290:three_prime_UTR |
| CTATTTCAGTCCACAATCAA+CGG | 0.570423 | 6_4:-18298404 | None:intergenic |
| ATCCGTGCTTGTTTAGAAGG+TGG | 0.571890 | 6_4:+18296844 | Msa0980290:CDS |
| GGAAAATGATGCTGAAAATG+AGG | 0.573613 | 6_4:+18298316 | Msa0980290:three_prime_UTR |
| GCAATGGTATACGCTTGAAT+CGG | 0.574115 | 6_4:+18295900 | Msa0980290:CDS |
| AATGAGGGTGCCAAAGAACA+TGG | 0.574433 | 6_4:+18297758 | Msa0980290:CDS |
| AAACCGGTCTACAACAGTCC+TGG | 0.576100 | 6_4:-18297067 | None:intergenic |
| GTTTACTAAACCGATCCGAC+CGG | 0.577318 | 6_4:-18296193 | None:intergenic |
| TTCCGGTGAAAACCAAAGAT+GGG | 0.579067 | 6_4:+18296986 | Msa0980290:CDS |
| TCGGATCGGTTTAGTAAACT+CGG | 0.580775 | 6_4:+18296197 | Msa0980290:CDS |
| GTGGGTGAATCCGGCAACAA+CGG | 0.581645 | 6_4:+18297629 | Msa0980290:CDS |
| CCGACTGATTTGGTTACCGG+TGG | 0.583036 | 6_4:-18295232 | None:intergenic |
| TTTATTATCTGAGGCATCCG+AGG | 0.583279 | 6_4:+18298075 | Msa0980290:CDS |
| AAGCTTCCAATCTCTCACCC+TGG | 0.584206 | 6_4:-18297941 | None:intergenic |
| ACCGGAGGTTGTTAATCCAC+CGG | 0.584801 | 6_4:+18295411 | Msa0980290:CDS |
| GGTTAGATGGAATTCGCACG+TGG | 0.584819 | 6_4:+18297610 | Msa0980290:CDS |
| TTACCTGTTACCGATTCAGC+CGG | 0.585131 | 6_4:+18295175 | Msa0980290:CDS |
| GGTTCGAATCAGGTACGATA+GGG | 0.586450 | 6_4:+18297869 | Msa0980290:CDS |
| GCTTGAATCGGAAAATTCAC+CGG | 0.587335 | 6_4:+18295912 | Msa0980290:CDS |
| TTTATCTTTCTCCGAAGCTG+TGG | 0.588326 | 6_4:+18296043 | Msa0980290:CDS |
| TCAAAACATCTTGCTGACCC+GGG | 0.588752 | 6_4:-18297410 | None:intergenic |
| GAGGATGTCCTACGTGGACA+TGG | 0.588871 | 6_4:+18297785 | Msa0980290:CDS |
| TACGCGATCGTTGATTTCGA+CGG | 0.589131 | 6_4:+18294854 | Msa0980290:CDS |
| TAGACCGGTTTAACCCGAGA+TGG | 0.590412 | 6_4:+18297079 | Msa0980290:CDS |
| CAAATAACGGAGATTTCACT+CGG | 0.591708 | 6_4:+18295814 | Msa0980290:CDS |
| AGTTCCGAAAAGAGTTCCAC+CGG | 0.593353 | 6_4:+18295861 | Msa0980290:CDS |
| GAGGTTTAGGAACAGAATGA+GGG | 0.595506 | 6_4:+18297743 | Msa0980290:CDS |
| TCCGGCACCGGAAAATCCAC+CGG | 0.596866 | 6_4:+18295375 | Msa0980290:CDS |
| TCGAGAGGAGATTAGATGAT+CGG | 0.599775 | 6_4:+18296349 | Msa0980290:CDS |
| GCAAACATCGCTGTAGCACG+TGG | 0.600043 | 6_4:-18297981 | None:intergenic |
| CAAACCCAGCTGTAAATCCT+GGG | 0.600092 | 6_4:-18296091 | None:intergenic |
| GGACGGATGTGAAGTCCAGA+TGG | 0.601986 | 6_4:+18296370 | Msa0980290:CDS |
| GGTGCAGGCGGAATTGCCGG+TGG | 0.603110 | 6_4:-18295391 | None:intergenic |
| AGTTTAATTAGTACTTAAGG+TGG | 0.604988 | 6_4:+18298211 | Msa0980290:three_prime_UTR |
| AACGGAGATTTCACTCGGAA+CGG | 0.606889 | 6_4:+18295819 | Msa0980290:CDS |
| AGAACAAAGAGTGAAAATGA+AGG | 0.607463 | 6_4:+18295682 | Msa0980290:CDS |
| TGGTTTGAAAATTTCTTACG+TGG | 0.608351 | 6_4:+18295144 | Msa0980290:CDS |
| GTAACCAAATCAGTCGGTGA+TGG | 0.608863 | 6_4:+18295238 | Msa0980290:CDS |
| GGCATGTCACCACGAAACCT+CGG | 0.609287 | 6_4:-18298092 | None:intergenic |
| GATACCGGAGACACGAGCGA+AGG | 0.611413 | 6_4:+18296020 | Msa0980290:CDS |
| TGATGAAAAGAAAGAAGAGA+AGG | 0.614436 | 6_4:+18295198 | Msa0980290:CDS |
| TCCTTCGTTTCAGCTACCGG+TGG | 0.618506 | 6_4:-18295427 | None:intergenic |
| CCACCGGTTACCGAACCAGC+CGG | 0.618550 | 6_4:+18295280 | Msa0980290:CDS |
| TGTCTCCGGTATCAAACCAC+CGG | 0.619470 | 6_4:-18296010 | None:intergenic |
| ATGTCCACGTAGGACATCCT+CGG | 0.620138 | 6_4:-18297783 | None:intergenic |
| CCGGCTGGTTCGGTAACCGG+TGG | 0.620276 | 6_4:-18295280 | None:intergenic |
| AGGTCATTGACTCTTGGTCA+AGG | 0.623725 | 6_4:-18294949 | None:intergenic |
| ATACTCATGTGTGGAGCATG+AGG | 0.623826 | 6_4:+18297523 | Msa0980290:CDS |
| GCAATCATAACGTCATTCCC+CGG | 0.627372 | 6_4:-18295931 | None:intergenic |
| CAGAGATCGAAGCAGAAGCG+CGG | 0.627407 | 6_4:+18295537 | Msa0980290:CDS |
| ACCAAATCTTCATTCCACGT+CGG | 0.628402 | 6_4:-18296225 | None:intergenic |
| TTAACAACCTCCGGTGCAGG+CGG | 0.629400 | 6_4:-18295403 | None:intergenic |
| AAGAATCTAATGCCGAAAGA+CGG | 0.630498 | 6_4:+18294812 | Msa0980290:CDS |
| AATAAGAATTAACGTAGTCA+CGG | 0.632669 | 6_4:-18297242 | None:intergenic |
| GAGGAGATTAGATGATCGGA+CGG | 0.634983 | 6_4:+18296353 | Msa0980290:CDS |
| ATAGTCCATTAGCACCGCAA+TGG | 0.637924 | 6_4:+18295884 | Msa0980290:CDS |
| ATCCACCTTCTAAACAAGCA+CGG | 0.638012 | 6_4:-18296846 | None:intergenic |
| GAAGGTTGAAGAGAATCCAC+CGG | 0.639457 | 6_4:+18295216 | Msa0980290:CDS |
| GGAAGCACGTTTGTGAAAAG+CGG | 0.639955 | 6_4:+18295055 | Msa0980290:CDS |
| TGCCAAAGAACATGGATCCG+AGG | 0.642801 | 6_4:+18297766 | Msa0980290:CDS |
| TAGAGAAAACAGAACAGCAA+CGG | 0.643601 | 6_4:-18294674 | None:intergenic |
| ATTGATCTCCATCGTCTCAG+AGG | 0.644785 | 6_4:-18294969 | None:intergenic |
| AACTGCTATGAAGATAGTAA+CGG | 0.650640 | 6_4:+18297437 | Msa0980290:CDS |
| TAAACTCGGGTAACCCGACG+TGG | 0.651079 | 6_4:+18296211 | Msa0980290:CDS |
| AAGAAGTTCACGAAAACAGA+CGG | 0.651665 | 6_4:-18298113 | None:intergenic |
| CGGATCGGTTTAGTAAACTC+GGG | 0.658120 | 6_4:+18296198 | Msa0980290:CDS |
| GCTGTGGTATTTGAGACTAA+CGG | 0.660341 | 6_4:+18296059 | Msa0980290:CDS |
| AACTCCAGCAGAGAAAACTC+CGG | 0.662938 | 6_4:+18295357 | Msa0980290:CDS |
| AAAACCAAAGATGGGACACG+TGG | 0.664933 | 6_4:+18296994 | Msa0980290:CDS |
| GAATGGGGAAAATTCGTGTG+CGG | 0.674459 | 6_4:+18297199 | Msa0980290:CDS |
| ATGCTAGAGATGTCAGAATG+GGG | 0.678013 | 6_4:+18297184 | Msa0980290:CDS |
| CCACCGGTAACCAAATCAGT+CGG | 0.683840 | 6_4:+18295232 | Msa0980290:CDS |
| TAATTCATCAATGACTACGA+CGG | 0.684352 | 6_4:+18294745 | Msa0980290:exon |
| CTAATGCCGAAAGACGGTCA+AGG | 0.685567 | 6_4:+18294818 | Msa0980290:CDS |
| GTTAGATGGAATTCGCACGT+GGG | 0.694324 | 6_4:+18297611 | Msa0980290:CDS |
| GGTGCTAATGGACTATCCGG+TGG | 0.707887 | 6_4:-18295877 | None:intergenic |
| ATAATCTGATCAGAAAACGA+CGG | 0.708907 | 6_4:-18298146 | None:intergenic |
| GATTCAAGCGTATACCATTG+CGG | 0.708958 | 6_4:-18295898 | None:intergenic |
| TATGAAATTGTTCAGAAACG+AGG | 0.709736 | 6_4:+18295472 | Msa0980290:CDS |
| ATGGAATGAGCAATACACAT+GGG | 0.710143 | 6_4:+18297098 | Msa0980290:CDS |
| ACTAACGGTTATCCAAACCC+AGG | 0.721683 | 6_4:+18296074 | Msa0980290:CDS |
| GATGGAATGAGCAATACACA+TGG | 0.725517 | 6_4:+18297097 | Msa0980290:CDS |
| GGATCCGAGGATGTCCTACG+TGG | 0.726968 | 6_4:+18297779 | Msa0980290:CDS |
| AACAACTGATGCTTATGTGG+TGG | 0.739510 | 6_4:+18297017 | Msa0980290:CDS |
| TGGGAAAACAAAGATCCATG+TGG | 0.744037 | 6_4:+18296320 | Msa0980290:CDS |
| CAAACTTACCATGTCCACGT+AGG | 0.751076 | 6_4:-18297793 | None:intergenic |
| TTGATTCGGATACTCATGTG+TGG | 0.755979 | 6_4:+18297514 | Msa0980290:CDS |
| TTGAATCGGAAAATTCACCG+GGG | 0.804497 | 6_4:+18295914 | Msa0980290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTAATAGTATTTTTTGA+AGG | - | chr6_4:18296574-18296593 | None:intergenic | 10.0% |
| !! | TTCAAAAAATACTATTAATT+AGG | + | chr6_4:18296573-18296592 | Msa0980290:intron | 10.0% |
| !! | AGTAAAATATGCAATATATT+TGG | - | chr6_4:18296454-18296473 | None:intergenic | 15.0% |
| !! | ATTGATGAATTATTTGATTG+AGG | - | chr6_4:18294737-18294756 | None:intergenic | 20.0% |
| !! | AAACAAAGAGAAACAAATAA+CGG | + | chr6_4:18295801-18295820 | Msa0980290:CDS | 20.0% |
| !! | TCTAATGTAATAACTAGAAA+CGG | - | chr6_4:18296276-18296295 | None:intergenic | 20.0% |
| !! | TTTCAAATTCAAGATCAATT+GGG | + | chr6_4:18296301-18296320 | Msa0980290:CDS | 20.0% |
| !!! | TATATTGCATATTTTACTGT+TGG | + | chr6_4:18296456-18296475 | Msa0980290:intron | 20.0% |
| !! | AGTAGTTTAATTAGTACTTA+AGG | + | chr6_4:18298208-18298227 | Msa0980290:three_prime_UTR | 20.0% |
| ! | TTAGGAAAAGTTAAAATCTC+TGG | + | chr6_4:18295034-18295053 | Msa0980290:CDS | 25.0% |
| ! | AGAAGAAAATACAAAAGAAG+AGG | + | chr6_4:18295318-18295337 | Msa0980290:CDS | 25.0% |
| ! | TGAAAATGAAGGTAAAGATT+GGG | + | chr6_4:18295693-18295712 | Msa0980290:CDS | 25.0% |
| ! | GTTTCAAATTCAAGATCAAT+TGG | + | chr6_4:18296300-18296319 | Msa0980290:CDS | 25.0% |
| ! | AATGAGCTTATATTTAGAGA+CGG | + | chr6_4:18296640-18296659 | Msa0980290:intron | 25.0% |
| ! | AATCCAAAATGTCAATTAGT+GGG | - | chr6_4:18296800-18296819 | None:intergenic | 25.0% |
| ! | AAATCCAAAATGTCAATTAG+TGG | - | chr6_4:18296801-18296820 | None:intergenic | 25.0% |
| !! | ACAATTGGAGTTTTTGATAA+TGG | + | chr6_4:18297147-18297166 | Msa0980290:CDS | 25.0% |
| ! | AATAAGAATTAACGTAGTCA+CGG | - | chr6_4:18297245-18297264 | None:intergenic | 25.0% |
| !! | TTAGATTTTCATGTTCTTCA+TGG | + | chr6_4:18297322-18297341 | Msa0980290:CDS | 25.0% |
| ! | AAAGCATACATAAAAACTGT+TGG | - | chr6_4:18297708-18297727 | None:intergenic | 25.0% |
| ! | AGTTTAATTAGTACTTAAGG+TGG | + | chr6_4:18298211-18298230 | Msa0980290:three_prime_UTR | 25.0% |
| ! | TAATATGATTTGAGCTACTT+TGG | + | chr6_4:18298294-18298313 | Msa0980290:three_prime_UTR | 25.0% |
| !! | AATATGATTTGAGCTACTTT+GGG | + | chr6_4:18298295-18298314 | Msa0980290:three_prime_UTR | 25.0% |
| TAATTCATCAATGACTACGA+CGG | + | chr6_4:18294745-18294764 | Msa0980290:exon | 30.0% | |
| AAGAGATTTGAATCCTCAAT+GGG | + | chr6_4:18294904-18294923 | Msa0980290:CDS | 30.0% | |
| TACAACGACAAAAAAACAAC+TGG | + | chr6_4:18294995-18295014 | Msa0980290:CDS | 30.0% | |
| ACAACGACAAAAAAACAACT+GGG | + | chr6_4:18294996-18295015 | Msa0980290:CDS | 30.0% | |
| TTTACTATCCGTTAGAGAAA+AGG | + | chr6_4:18295092-18295111 | Msa0980290:CDS | 30.0% | |
| TGGTTTGAAAATTTCTTACG+TGG | + | chr6_4:18295144-18295163 | Msa0980290:CDS | 30.0% | |
| TGATGAAAAGAAAGAAGAGA+AGG | + | chr6_4:18295198-18295217 | Msa0980290:CDS | 30.0% | |
| TATGAAATTGTTCAGAAACG+AGG | + | chr6_4:18295472-18295491 | Msa0980290:CDS | 30.0% | |
| !!! | CTTTTTTCAAAGCTTGTGAT+TGG | + | chr6_4:18295646-18295665 | Msa0980290:CDS | 30.0% |
| AGAACAAAGAGTGAAAATGA+AGG | + | chr6_4:18295682-18295701 | Msa0980290:CDS | 30.0% | |
| GTGAAAATGAAGGTAAAGAT+TGG | + | chr6_4:18295692-18295711 | Msa0980290:CDS | 30.0% | |
| !! | GTTTTCGCTTTTGATAAAGA+AGG | + | chr6_4:18295721-18295740 | Msa0980290:CDS | 30.0% |
| AGGATTGAATTCAACTTCTT+TGG | + | chr6_4:18295741-18295760 | Msa0980290:CDS | 30.0% | |
| TGATTCTGATTCTAACCAAA+CGG | - | chr6_4:18295773-18295792 | None:intergenic | 30.0% | |
| TTATGATTGCAGTATGGATT+GGG | + | chr6_4:18295944-18295963 | Msa0980290:CDS | 30.0% | |
| !!! | GAATGAAGATTTGGTTTTTG+TGG | + | chr6_4:18296233-18296252 | Msa0980290:CDS | 30.0% |
| ATAACTAGAAACGGTTCAAA+CGG | - | chr6_4:18296267-18296286 | None:intergenic | 30.0% | |
| GAGGAAAATCTTTCTTATAC+AGG | + | chr6_4:18296411-18296430 | Msa0980290:CDS | 30.0% | |
| ! | CAATTGGTTTACTTGAAGTT+GGG | + | chr6_4:18296941-18296960 | Msa0980290:CDS | 30.0% |
| !!! | TTGGAGTTTTTGATAATGGA+AGG | + | chr6_4:18297151-18297170 | Msa0980290:CDS | 30.0% |
| TAATGCATTCTTGGTAGAAT+TGG | - | chr6_4:18297375-18297394 | None:intergenic | 30.0% | |
| ATGCATTACGTTAAACCATT+CGG | + | chr6_4:18297387-18297406 | Msa0980290:CDS | 30.0% | |
| AACTGCTATGAAGATAGTAA+CGG | + | chr6_4:18297437-18297456 | Msa0980290:CDS | 30.0% | |
| !! | ACTGTGTTTTATTGGTTAGA+TGG | + | chr6_4:18297597-18297616 | Msa0980290:CDS | 30.0% |
| ! | ACTGTTGGTAGAATCAAATA+AGG | - | chr6_4:18297693-18297712 | None:intergenic | 30.0% |
| ! | CTTTCTTGATTCTGATTTTG+AGG | + | chr6_4:18297724-18297743 | Msa0980290:CDS | 30.0% |
| !!! | TGATTCTGATTTTGAGGTTT+AGG | + | chr6_4:18297730-18297749 | Msa0980290:CDS | 30.0% |
| ! | AAAAGCACAAACCCTTTAAA+CGG | - | chr6_4:18298047-18298066 | None:intergenic | 30.0% |
| ATAATCTGATCAGAAAACGA+CGG | - | chr6_4:18298149-18298168 | None:intergenic | 30.0% | |
| TGGTCTGAATGTGTATAAAA+GGG | + | chr6_4:18298359-18298378 | Msa0980290:three_prime_UTR | 30.0% | |
| TAGAGAAAACAGAACAGCAA+CGG | - | chr6_4:18294677-18294696 | None:intergenic | 35.0% | |
| AAGAATCTAATGCCGAAAGA+CGG | + | chr6_4:18294812-18294831 | Msa0980290:CDS | 35.0% | |
| CAAGAGATTTGAATCCTCAA+TGG | + | chr6_4:18294903-18294922 | Msa0980290:CDS | 35.0% | |
| !!! | GGGAAGAGAAGTACTTTTTT+AGG | + | chr6_4:18295016-18295035 | Msa0980290:CDS | 35.0% |
| ! | AAAACGCTCCTTTTCTCTAA+CGG | - | chr6_4:18295103-18295122 | None:intergenic | 35.0% |
| ! | AGCGTTTTCTCTCAGATTAA+AGG | + | chr6_4:18295115-18295134 | Msa0980290:CDS | 35.0% |
| TCTCAGATTAAAGGTGAACT+TGG | + | chr6_4:18295124-18295143 | Msa0980290:CDS | 35.0% | |
| ! | CTCTTCTTTCTTTTCATCAC+CGG | - | chr6_4:18295197-18295216 | None:intergenic | 35.0% |
| ! | TTCTGTTTTCTTCTCATCAC+CGG | - | chr6_4:18295302-18295321 | None:intergenic | 35.0% |
| ACAACGCGAACATATAGAAA+TGG | - | chr6_4:18295586-18295605 | None:intergenic | 35.0% | |
| TCTATATGTTCGCGTTGTTA+AGG | + | chr6_4:18295588-18295607 | Msa0980290:CDS | 35.0% | |
| ! | CAAATAACGGAGATTTCACT+CGG | + | chr6_4:18295814-18295833 | Msa0980290:CDS | 35.0% |
| ATGACGTTATGATTGCAGTA+TGG | + | chr6_4:18295938-18295957 | Msa0980290:CDS | 35.0% | |
| GTTATGATTGCAGTATGGAT+TGG | + | chr6_4:18295943-18295962 | Msa0980290:CDS | 35.0% | |
| GAGTCCTGAACTTTATGTTA+AGG | + | chr6_4:18296143-18296162 | Msa0980290:CDS | 35.0% | |
| TGAGCCTTAACATAAAGTTC+AGG | - | chr6_4:18296150-18296169 | None:intergenic | 35.0% | |
| TCCAGATGGTTTAATCTTTG+TGG | + | chr6_4:18296384-18296403 | Msa0980290:CDS | 35.0% | |
| ACCACAAAGATTAAACCATC+TGG | - | chr6_4:18296388-18296407 | None:intergenic | 35.0% | |
| GTTTAATCTTTGTGGTTCAG+AGG | + | chr6_4:18296392-18296411 | Msa0980290:CDS | 35.0% | |
| ACTTCAAGTAAACCAATTGG+AGG | - | chr6_4:18296940-18296959 | None:intergenic | 35.0% | |
| CCAACTTCAAGTAAACCAAT+TGG | - | chr6_4:18296943-18296962 | None:intergenic | 35.0% | |
| ! | CCAATTGGTTTACTTGAAGT+TGG | + | chr6_4:18296940-18296959 | Msa0980290:CDS | 35.0% |
| ATGGAATGAGCAATACACAT+GGG | + | chr6_4:18297098-18297117 | Msa0980290:CDS | 35.0% | |
| CCAATTGTTAAAACTGTGCA+AGG | - | chr6_4:18297135-18297154 | None:intergenic | 35.0% | |
| !! | CCTTGCACAGTTTTAACAAT+TGG | + | chr6_4:18297132-18297151 | Msa0980290:CDS | 35.0% |
| !! | TCGTTGATTGTTTTATTGCC+AGG | + | chr6_4:18297264-18297283 | Msa0980290:CDS | 35.0% |
| !! | TTGATTGTTTTATTGCCAGG+TGG | + | chr6_4:18297267-18297286 | Msa0980290:CDS | 35.0% |
| GGTTTAACGTAATGCATTCT+TGG | - | chr6_4:18297384-18297403 | None:intergenic | 35.0% | |
| TGAGGAAAAGTAAAGCGAAT+TGG | + | chr6_4:18297541-18297560 | Msa0980290:CDS | 35.0% | |
| ! | GCGAATTGGTTTAGATTAGT+TGG | + | chr6_4:18297555-18297574 | Msa0980290:CDS | 35.0% |
| GAACTTGATGAAGAGTTTGA+TGG | + | chr6_4:18297819-18297838 | Msa0980290:CDS | 35.0% | |
| !! | TTGATGGTTTTCCAACAATG+AGG | + | chr6_4:18297835-18297854 | Msa0980290:CDS | 35.0% |
| !! | GATTGGAAGCTTTGTTTAGT+TGG | + | chr6_4:18297952-18297971 | Msa0980290:CDS | 35.0% |
| GATGTTTGCGATATTCTGTT+TGG | + | chr6_4:18297995-18298014 | Msa0980290:CDS | 35.0% | |
| !! | ATTCTGTTTGGTAATGTCGT+TGG | + | chr6_4:18298007-18298026 | Msa0980290:CDS | 35.0% |
| ! | GTTTAAAGGGTTTGTGCTTT+TGG | + | chr6_4:18298046-18298065 | Msa0980290:CDS | 35.0% |
| AAGAAGTTCACGAAAACAGA+CGG | - | chr6_4:18298116-18298135 | None:intergenic | 35.0% | |
| ! | CTGTTTTCGTGAACTTCTTT+CGG | + | chr6_4:18298117-18298136 | Msa0980290:CDS | 35.0% |
| !!! | AGGTGGCACTGTTTTTTTAA+TGG | + | chr6_4:18298228-18298247 | Msa0980290:three_prime_UTR | 35.0% |
| GGAAAATGATGCTGAAAATG+AGG | + | chr6_4:18298316-18298335 | Msa0980290:three_prime_UTR | 35.0% | |
| GATGCTGAAAATGAGGAAAA+AGG | + | chr6_4:18298323-18298342 | Msa0980290:three_prime_UTR | 35.0% | |
| !! | AATGAGGAAAAAGGTGTTCT+TGG | + | chr6_4:18298332-18298351 | Msa0980290:three_prime_UTR | 35.0% |
| !! | AAAAAGGTGTTCTTGGTATG+TGG | + | chr6_4:18298339-18298358 | Msa0980290:three_prime_UTR | 35.0% |
| GTGGTCTGAATGTGTATAAA+AGG | + | chr6_4:18298358-18298377 | Msa0980290:three_prime_UTR | 35.0% | |
| AGGGTCTGAATGTGTATAAA+AGG | + | chr6_4:18298378-18298397 | Msa0980290:three_prime_UTR | 35.0% | |
| ! | TAAAAGGTTACCGTTGATTG+TGG | + | chr6_4:18298394-18298413 | Msa0980290:three_prime_UTR | 35.0% |
| CTATTTCAGTCCACAATCAA+CGG | - | chr6_4:18298407-18298426 | None:intergenic | 35.0% | |
| !!! | GAACAGCAACGGTTTTTTTG+AGG | - | chr6_4:18294666-18294685 | None:intergenic | 40.0% |
| GAAAAAAGACGAGAATCCAC+CGG | + | chr6_4:18295264-18295283 | Msa0980290:CDS | 40.0% | |
| ! | TCTGCTGGAGTTTCTTCTTT+TGG | - | chr6_4:18295349-18295368 | None:intergenic | 40.0% |
| TGAAGGTAAAGATTGGGATC+AGG | + | chr6_4:18295699-18295718 | Msa0980290:CDS | 40.0% | |
| ! | CTTCTTTGGAAGTTTCCGTT+TGG | + | chr6_4:18295755-18295774 | Msa0980290:CDS | 40.0% |
| GATTCAAGCGTATACCATTG+CGG | - | chr6_4:18295901-18295920 | None:intergenic | 40.0% | |
| GCAATGGTATACGCTTGAAT+CGG | + | chr6_4:18295900-18295919 | Msa0980290:CDS | 40.0% | |
| GCTTGAATCGGAAAATTCAC+CGG | + | chr6_4:18295912-18295931 | Msa0980290:CDS | 40.0% | |
| CTTGAATCGGAAAATTCACC+GGG | + | chr6_4:18295913-18295932 | Msa0980290:CDS | 40.0% | |
| TTGAATCGGAAAATTCACCG+GGG | + | chr6_4:18295914-18295933 | Msa0980290:CDS | 40.0% | |
| TTTATCTTTCTCCGAAGCTG+TGG | + | chr6_4:18296043-18296062 | Msa0980290:CDS | 40.0% | |
| AGTCTCAAATACCACAGCTT+CGG | - | chr6_4:18296057-18296076 | None:intergenic | 40.0% | |
| ! | GCTGTGGTATTTGAGACTAA+CGG | + | chr6_4:18296059-18296078 | Msa0980290:CDS | 40.0% |
| CTTTATGTTAAGGCTCAGCT+TGG | + | chr6_4:18296153-18296172 | Msa0980290:CDS | 40.0% | |
| !!! | GGTGCACAGGTTTTTAAAAC+CGG | + | chr6_4:18296174-18296193 | Msa0980290:CDS | 40.0% |
| !!! | CACAGGTTTTTAAAACCGGT+CGG | + | chr6_4:18296178-18296197 | Msa0980290:CDS | 40.0% |
| !!! | GTTTTTAAAACCGGTCGGAT+CGG | + | chr6_4:18296183-18296202 | Msa0980290:CDS | 40.0% |
| ! | TCGGATCGGTTTAGTAAACT+CGG | + | chr6_4:18296197-18296216 | Msa0980290:CDS | 40.0% |
| ACCAAATCTTCATTCCACGT+CGG | - | chr6_4:18296228-18296247 | None:intergenic | 40.0% | |
| TGGGAAAACAAAGATCCATG+TGG | + | chr6_4:18296320-18296339 | Msa0980290:CDS | 40.0% | |
| TCGAGAGGAGATTAGATGAT+CGG | + | chr6_4:18296349-18296368 | Msa0980290:CDS | 40.0% | |
| AAATGTCAATTAGTGGGAGC+AGG | - | chr6_4:18296794-18296813 | None:intergenic | 40.0% | |
| ! | GCTCCCACTAATTGACATTT+TGG | + | chr6_4:18296794-18296813 | Msa0980290:intron | 40.0% |
| ! | TTTTGGATTTGTCTCTGCAC+AGG | + | chr6_4:18296811-18296830 | Msa0980290:intron | 40.0% |
| CATATCCGTGCTTGTTTAGA+AGG | + | chr6_4:18296841-18296860 | Msa0980290:CDS | 40.0% | |
| ATCCACCTTCTAAACAAGCA+CGG | - | chr6_4:18296849-18296868 | None:intergenic | 40.0% | |
| TTACTTGAAGTTGGGATTCG+TGG | + | chr6_4:18296949-18296968 | Msa0980290:CDS | 40.0% | |
| TTCCGGTGAAAACCAAAGAT+GGG | + | chr6_4:18296986-18297005 | Msa0980290:CDS | 40.0% | |
| TGGAACAACTGATGCTTATG+TGG | + | chr6_4:18297014-18297033 | Msa0980290:CDS | 40.0% | |
| AACAACTGATGCTTATGTGG+TGG | + | chr6_4:18297017-18297036 | Msa0980290:CDS | 40.0% | |
| TGGCGAAATATGGTCCAAAA+TGG | + | chr6_4:18297037-18297056 | Msa0980290:CDS | 40.0% | |
| GGCGAAATATGGTCCAAAAT+GGG | + | chr6_4:18297038-18297057 | Msa0980290:CDS | 40.0% | |
| TGTATTGCTCATTCCATCTC+GGG | - | chr6_4:18297095-18297114 | None:intergenic | 40.0% | |
| GTGTATTGCTCATTCCATCT+CGG | - | chr6_4:18297096-18297115 | None:intergenic | 40.0% | |
| GATGGAATGAGCAATACACA+TGG | + | chr6_4:18297097-18297116 | Msa0980290:CDS | 40.0% | |
| AGATGCTAGAGATGTCAGAA+TGG | + | chr6_4:18297182-18297201 | Msa0980290:CDS | 40.0% | |
| GATGCTAGAGATGTCAGAAT+GGG | + | chr6_4:18297183-18297202 | Msa0980290:CDS | 40.0% | |
| ATGCTAGAGATGTCAGAATG+GGG | + | chr6_4:18297184-18297203 | Msa0980290:CDS | 40.0% | |
| TTCATGGCTGAGTTTAATGC+AGG | + | chr6_4:18297338-18297357 | Msa0980290:CDS | 40.0% | |
| GGTTCAGTTCATGCTTGATT+CGG | + | chr6_4:18297500-18297519 | Msa0980290:CDS | 40.0% | |
| !! | TTGATTCGGATACTCATGTG+TGG | + | chr6_4:18297514-18297533 | Msa0980290:CDS | 40.0% |
| ! | GTTCGACGACTGTGTTTTAT+TGG | + | chr6_4:18297589-18297608 | Msa0980290:CDS | 40.0% |
| TGAACTAAAACCGTTGTTGC+CGG | - | chr6_4:18297642-18297661 | None:intergenic | 40.0% | |
| TGAGGTTTAGGAACAGAATG+AGG | + | chr6_4:18297742-18297761 | Msa0980290:CDS | 40.0% | |
| GAGGTTTAGGAACAGAATGA+GGG | + | chr6_4:18297743-18297762 | Msa0980290:CDS | 40.0% | |
| ! | TTTTCCAACAATGAGGTCTG+TGG | + | chr6_4:18297842-18297861 | Msa0980290:CDS | 40.0% |
| !! | TTCTATGCTGTGCCGTTTAA+AGG | + | chr6_4:18298032-18298051 | Msa0980290:CDS | 40.0% |
| !! | TCTATGCTGTGCCGTTTAAA+GGG | + | chr6_4:18298033-18298052 | Msa0980290:CDS | 40.0% |
| !!! | TGGCTGGGTTTTATTATCTG+AGG | + | chr6_4:18298066-18298085 | Msa0980290:CDS | 40.0% |
| ! | TTTATTATCTGAGGCATCCG+AGG | + | chr6_4:18298075-18298094 | Msa0980290:CDS | 40.0% |
| CGACGGAAGTAGTTTCTGTA+AGG | + | chr6_4:18294762-18294781 | Msa0980290:CDS | 45.0% | |
| !! | TACGCGATCGTTGATTTCGA+CGG | + | chr6_4:18294854-18294873 | Msa0980290:CDS | 45.0% |
| !! | AGGTCATTGACTCTTGGTCA+AGG | - | chr6_4:18294952-18294971 | None:intergenic | 45.0% |
| !! | TCTCAGAGGTCATTGACTCT+TGG | - | chr6_4:18294958-18294977 | None:intergenic | 45.0% |
| ATTGATCTCCATCGTCTCAG+AGG | - | chr6_4:18294972-18294991 | None:intergenic | 45.0% | |
| ! | GGAAGCACGTTTGTGAAAAG+CGG | + | chr6_4:18295055-18295074 | Msa0980290:CDS | 45.0% |
| !! | TTACCTGTTACCGATTCAGC+CGG | + | chr6_4:18295175-18295194 | Msa0980290:CDS | 45.0% |
| !! | CTTTTCATCACCGGCTGAAT+CGG | - | chr6_4:18295188-18295207 | None:intergenic | 45.0% |
| GAAGGTTGAAGAGAATCCAC+CGG | + | chr6_4:18295216-18295235 | Msa0980290:CDS | 45.0% | |
| !! | TCACCGACTGATTTGGTTAC+CGG | - | chr6_4:18295238-18295257 | None:intergenic | 45.0% |
| GTAACCAAATCAGTCGGTGA+TGG | + | chr6_4:18295238-18295257 | Msa0980290:CDS | 45.0% | |
| AACTCCAGCAGAGAAAACTC+CGG | + | chr6_4:18295357-18295376 | Msa0980290:CDS | 45.0% | |
| ACATCCTTCGTTTCAGCTAC+CGG | - | chr6_4:18295433-18295452 | None:intergenic | 45.0% | |
| AACGGAGATTTCACTCGGAA+CGG | + | chr6_4:18295819-18295838 | Msa0980290:CDS | 45.0% | |
| AGTTCCGAAAAGAGTTCCAC+CGG | + | chr6_4:18295861-18295880 | Msa0980290:CDS | 45.0% | |
| ! | CTATCCGGTGGAACTCTTTT+CGG | - | chr6_4:18295868-18295887 | None:intergenic | 45.0% |
| ATAGTCCATTAGCACCGCAA+TGG | + | chr6_4:18295884-18295903 | Msa0980290:CDS | 45.0% | |
| ! | GTATACCATTGCGGTGCTAA+TGG | - | chr6_4:18295892-18295911 | None:intergenic | 45.0% |
| GCAATCATAACGTCATTCCC+CGG | - | chr6_4:18295934-18295953 | None:intergenic | 45.0% | |
| CGACTCCTGAAAAGCTTCAT+CGG | - | chr6_4:18295977-18295996 | None:intergenic | 45.0% | |
| !! | ATGAAGCTTTTCAGGAGTCG+TGG | + | chr6_4:18295977-18295996 | Msa0980290:CDS | 45.0% |
| ACTAACGGTTATCCAAACCC+AGG | + | chr6_4:18296074-18296093 | Msa0980290:CDS | 45.0% | |
| CAAACCCAGGATTTACAGCT+GGG | + | chr6_4:18296087-18296106 | Msa0980290:CDS | 45.0% | |
| CAAACCCAGCTGTAAATCCT+GGG | - | chr6_4:18296094-18296113 | None:intergenic | 45.0% | |
| TCAAACCCAGCTGTAAATCC+TGG | - | chr6_4:18296095-18296114 | None:intergenic | 45.0% | |
| GATTTACAGCTGGGTTTGAG+TGG | + | chr6_4:18296096-18296115 | Msa0980290:CDS | 45.0% | |
| GTTTACTAAACCGATCCGAC+CGG | - | chr6_4:18296196-18296215 | None:intergenic | 45.0% | |
| ! | CGGATCGGTTTAGTAAACTC+GGG | + | chr6_4:18296198-18296217 | Msa0980290:CDS | 45.0% |
| CCAAATCTTCATTCCACGTC+GGG | - | chr6_4:18296227-18296246 | None:intergenic | 45.0% | |
| GAGGAGATTAGATGATCGGA+CGG | + | chr6_4:18296353-18296372 | Msa0980290:CDS | 45.0% | |
| ATCCGTGCTTGTTTAGAAGG+TGG | + | chr6_4:18296844-18296863 | Msa0980290:CDS | 45.0% | |
| TTAACTGCTTCGCAGAAGCA+CGG | - | chr6_4:18296912-18296931 | None:intergenic | 45.0% | |
| CAGTTAACGAAGCCTCCAAT+TGG | + | chr6_4:18296925-18296944 | Msa0980290:CDS | 45.0% | |
| TGGAGCAACGAATCTTCTTC+CGG | + | chr6_4:18296969-18296988 | Msa0980290:CDS | 45.0% | |
| CTTCCGGTGAAAACCAAAGA+TGG | + | chr6_4:18296985-18297004 | Msa0980290:CDS | 45.0% | |
| !!! | GTCCCATCTTTGGTTTTCAC+CGG | - | chr6_4:18296991-18297010 | None:intergenic | 45.0% |
| AAAACCAAAGATGGGACACG+TGG | + | chr6_4:18296994-18297013 | Msa0980290:CDS | 45.0% | |
| ! | GCTTATGTGGTGGCGAAATA+TGG | + | chr6_4:18297027-18297046 | Msa0980290:CDS | 45.0% |
| CATTCCATCTCGGGTTAAAC+CGG | - | chr6_4:18297086-18297105 | None:intergenic | 45.0% | |
| GAATGGGGAAAATTCGTGTG+CGG | + | chr6_4:18297199-18297218 | Msa0980290:CDS | 45.0% | |
| TTACGTTAAACCATTCGGCC+CGG | + | chr6_4:18297392-18297411 | Msa0980290:CDS | 45.0% | |
| TCAAAACATCTTGCTGACCC+GGG | - | chr6_4:18297413-18297432 | None:intergenic | 45.0% | |
| CTCAAAACATCTTGCTGACC+CGG | - | chr6_4:18297414-18297433 | None:intergenic | 45.0% | |
| TAGTAACGGCTCGTTTAGCT+CGG | + | chr6_4:18297451-18297470 | Msa0980290:CDS | 45.0% | |
| ATACTCATGTGTGGAGCATG+AGG | + | chr6_4:18297523-18297542 | Msa0980290:CDS | 45.0% | |
| GTTAGATGGAATTCGCACGT+GGG | + | chr6_4:18297611-18297630 | Msa0980290:CDS | 45.0% | |
| !! | AATGAGGGTGCCAAAGAACA+TGG | + | chr6_4:18297758-18297777 | Msa0980290:CDS | 45.0% |
| ATCCTCGGATCCATGTTCTT+TGG | - | chr6_4:18297771-18297790 | None:intergenic | 45.0% | |
| CAAACTTACCATGTCCACGT+AGG | - | chr6_4:18297796-18297815 | None:intergenic | 45.0% | |
| CTACGTGGACATGGTAAGTT+TGG | + | chr6_4:18297794-18297813 | Msa0980290:CDS | 45.0% | |
| ACTTCCACAGACCTCATTGT+TGG | - | chr6_4:18297849-18297868 | None:intergenic | 45.0% | |
| AACAATGAGGTCTGTGGAAG+TGG | + | chr6_4:18297848-18297867 | Msa0980290:CDS | 45.0% | |
| TGGTTCGAATCAGGTACGAT+AGG | + | chr6_4:18297868-18297887 | Msa0980290:CDS | 45.0% | |
| GGTTCGAATCAGGTACGATA+GGG | + | chr6_4:18297869-18297888 | Msa0980290:CDS | 45.0% | |
| ! | AAAGGGTTTGTGCTTTTGGC+TGG | + | chr6_4:18298050-18298069 | Msa0980290:CDS | 45.0% |
| !! | AAGGGTTTGTGCTTTTGGCT+GGG | + | chr6_4:18298051-18298070 | Msa0980290:CDS | 45.0% |
| CTAATGCCGAAAGACGGTCA+AGG | + | chr6_4:18294818-18294837 | Msa0980290:CDS | 50.0% | |
| GCTGTTCCTTGACCGTCTTT+CGG | - | chr6_4:18294827-18294846 | None:intergenic | 50.0% | |
| TCGAGTTTCTCGTCCCATTG+AGG | - | chr6_4:18294920-18294939 | None:intergenic | 50.0% | |
| !! | GTCAATGACCTCTGAGACGA+TGG | + | chr6_4:18294961-18294980 | Msa0980290:CDS | 50.0% |
| CCACCGGTAACCAAATCAGT+CGG | + | chr6_4:18295232-18295251 | Msa0980290:CDS | 50.0% | |
| ! | CTCACCATCACCGACTGATT+TGG | - | chr6_4:18295245-18295264 | None:intergenic | 50.0% |
| ! | GTTTTCTTCTCATCACCGGC+TGG | - | chr6_4:18295298-18295317 | None:intergenic | 50.0% |
| !! | GGAATTGCCGGTGGATTTTC+CGG | - | chr6_4:18295385-18295404 | None:intergenic | 50.0% |
| ACCGGAGGTTGTTAATCCAC+CGG | + | chr6_4:18295411-18295430 | Msa0980290:CDS | 50.0% | |
| !! | ACCGGTGGATTAACAACCTC+CGG | - | chr6_4:18295415-18295434 | None:intergenic | 50.0% |
| !! | TGCGGTGCTAATGGACTATC+CGG | - | chr6_4:18295883-18295902 | None:intergenic | 50.0% |
| ! | GCAAGCCGATGAAGCTTTTC+AGG | + | chr6_4:18295969-18295988 | Msa0980290:CDS | 50.0% |
| !! | TTTTCAGGAGTCGTGGCAGT+CGG | + | chr6_4:18295984-18296003 | Msa0980290:CDS | 50.0% |
| GGATTCCGGTGGTTTGATAC+CGG | + | chr6_4:18296005-18296024 | Msa0980290:CDS | 50.0% | |
| TGTCTCCGGTATCAAACCAC+CGG | - | chr6_4:18296013-18296032 | None:intergenic | 50.0% | |
| TAAACCTTCGCTCGTGTCTC+CGG | - | chr6_4:18296027-18296046 | None:intergenic | 50.0% | |
| CCAGCTGTAAATCCTGGGTT+TGG | - | chr6_4:18296089-18296108 | None:intergenic | 50.0% | |
| CCAAACCCAGGATTTACAGC+TGG | + | chr6_4:18296086-18296105 | Msa0980290:CDS | 50.0% | |
| ACAGCTGGGTTTGAGTGGTT+TGG | + | chr6_4:18296101-18296120 | Msa0980290:CDS | 50.0% | |
| CAGCTGGGTTTGAGTGGTTT+GGG | + | chr6_4:18296102-18296121 | Msa0980290:CDS | 50.0% | |
| AGGACTCCGAACCTTAGGTT+CGG | - | chr6_4:18296130-18296149 | None:intergenic | 50.0% | |
| AGTTCAGGACTCCGAACCTT+AGG | - | chr6_4:18296135-18296154 | None:intergenic | 50.0% | |
| CCCGACGTGGAATGAAGATT+TGG | + | chr6_4:18296224-18296243 | Msa0980290:CDS | 50.0% | |
| GGATTTGTCTCTGCACAGGT+AGG | + | chr6_4:18296815-18296834 | Msa0980290:intron | 50.0% | |
| TGTTCCACGTGTCCCATCTT+TGG | - | chr6_4:18297001-18297020 | None:intergenic | 50.0% | |
| ! | GTCCAAAATGGGTTCGAACC+AGG | + | chr6_4:18297049-18297068 | Msa0980290:CDS | 50.0% |
| !! | GTCCTGGTTCGAACCCATTT+TGG | - | chr6_4:18297054-18297073 | None:intergenic | 50.0% |
| GAACCAGGACTGTTGTAGAC+CGG | + | chr6_4:18297064-18297083 | Msa0980290:CDS | 50.0% | |
| AAACCGGTCTACAACAGTCC+TGG | - | chr6_4:18297070-18297089 | None:intergenic | 50.0% | |
| ! | TAGACCGGTTTAACCCGAGA+TGG | + | chr6_4:18297079-18297098 | Msa0980290:CDS | 50.0% |
| ! | TTTTATTGCCAGGTGGTGCG+AGG | + | chr6_4:18297274-18297293 | Msa0980290:CDS | 50.0% |
| TACGTTAAACCATTCGGCCC+GGG | + | chr6_4:18297393-18297412 | Msa0980290:CDS | 50.0% | |
| ! | TCGTTTAGCTCGGTCTGAAC+CGG | + | chr6_4:18297461-18297480 | Msa0980290:CDS | 50.0% |
| ACCACTTCTGAACCCAAAGC+CGG | - | chr6_4:18297483-18297502 | None:intergenic | 50.0% | |
| GGTTAGATGGAATTCGCACG+TGG | + | chr6_4:18297610-18297629 | Msa0980290:CDS | 50.0% | |
| AATTCGCACGTGGGTGAATC+CGG | + | chr6_4:18297620-18297639 | Msa0980290:CDS | 50.0% | |
| TGCCAAAGAACATGGATCCG+AGG | + | chr6_4:18297766-18297785 | Msa0980290:CDS | 50.0% | |
| ATGTCCACGTAGGACATCCT+CGG | - | chr6_4:18297786-18297805 | None:intergenic | 50.0% | |
| CTGTGGAAGTGGTTCGAATC+AGG | + | chr6_4:18297859-18297878 | Msa0980290:CDS | 50.0% | |
| ! | GGGAGGGCACAAAGTTTGAT+TGG | + | chr6_4:18297906-18297925 | Msa0980290:CDS | 50.0% |
| AGCTTCCAATCTCTCACCCT+GGG | - | chr6_4:18297943-18297962 | None:intergenic | 50.0% | |
| AAGCTTCCAATCTCTCACCC+TGG | - | chr6_4:18297944-18297963 | None:intergenic | 50.0% | |
| CAAACATCGCTGTAGCACGT+GGG | - | chr6_4:18297983-18298002 | None:intergenic | 50.0% | |
| ! | TCACCGGCTGAATCGGTAAC+AGG | - | chr6_4:18295181-18295200 | None:intergenic | 55.0% |
| !! | CCGACTGATTTGGTTACCGG+TGG | - | chr6_4:18295235-18295254 | None:intergenic | 55.0% |
| ! | CTTCTCATCACCGGCTGGTT+CGG | - | chr6_4:18295293-18295312 | None:intergenic | 55.0% |
| AGCAGAGAAAACTCCGGCAC+CGG | + | chr6_4:18295363-18295382 | Msa0980290:CDS | 55.0% | |
| TTAACAACCTCCGGTGCAGG+CGG | - | chr6_4:18295406-18295425 | None:intergenic | 55.0% | |
| GGATTAACAACCTCCGGTGC+AGG | - | chr6_4:18295409-18295428 | None:intergenic | 55.0% | |
| TCCACCGGTAGCTGAAACGA+AGG | + | chr6_4:18295426-18295445 | Msa0980290:CDS | 55.0% | |
| TCCTTCGTTTCAGCTACCGG+TGG | - | chr6_4:18295430-18295449 | None:intergenic | 55.0% | |
| CAGAGATCGAAGCAGAAGCG+CGG | + | chr6_4:18295537-18295556 | Msa0980290:CDS | 55.0% | |
| !! | GGTGCTAATGGACTATCCGG+TGG | - | chr6_4:18295880-18295899 | None:intergenic | 55.0% |
| ! | TGGTTTGGGCTCCGAACCTA+AGG | + | chr6_4:18296116-18296135 | Msa0980290:CDS | 55.0% |
| TGGGCTCCGAACCTAAGGTT+CGG | + | chr6_4:18296121-18296140 | Msa0980290:CDS | 55.0% | |
| !! | TAAGGCTCAGCTTGGTGCAC+AGG | + | chr6_4:18296161-18296180 | Msa0980290:CDS | 55.0% |
| TAAACTCGGGTAACCCGACG+TGG | + | chr6_4:18296211-18296230 | Msa0980290:CDS | 55.0% | |
| GGACGGATGTGAAGTCCAGA+TGG | + | chr6_4:18296370-18296389 | Msa0980290:CDS | 55.0% | |
| !! | ACCGGCTTTGGGTTCAGAAG+TGG | + | chr6_4:18297479-18297498 | Msa0980290:CDS | 55.0% |
| GTGGGTGAATCCGGCAACAA+CGG | + | chr6_4:18297629-18297648 | Msa0980290:CDS | 55.0% | |
| GAGGATGTCCTACGTGGACA+TGG | + | chr6_4:18297785-18297804 | Msa0980290:CDS | 55.0% | |
| GCAAACATCGCTGTAGCACG+TGG | - | chr6_4:18297984-18298003 | None:intergenic | 55.0% | |
| GGCATGTCACCACGAAACCT+CGG | - | chr6_4:18298095-18298114 | None:intergenic | 55.0% | |
| !! | TCACCGGCTGGTTCGGTAAC+CGG | - | chr6_4:18295286-18295305 | None:intergenic | 60.0% |
| !! | GGTGCCGGAGTTTTCTCTGC+TGG | - | chr6_4:18295364-18295383 | None:intergenic | 60.0% |
| ! | TCCGGCACCGGAAAATCCAC+CGG | + | chr6_4:18295375-18295394 | Msa0980290:CDS | 60.0% |
| GAGTCGTGGCAGTCGGATTC+CGG | + | chr6_4:18295991-18296010 | Msa0980290:CDS | 60.0% | |
| GATACCGGAGACACGAGCGA+AGG | + | chr6_4:18296020-18296039 | Msa0980290:CDS | 60.0% | |
| !! | TCCATGTGGCGTCGATCGAG+AGG | + | chr6_4:18296334-18296353 | Msa0980290:CDS | 60.0% |
| TCCTCTCGATCGACGCCACA+TGG | - | chr6_4:18296338-18296357 | None:intergenic | 60.0% | |
| CCAGGTGGTGCGAGGAGAAT+GGG | + | chr6_4:18297282-18297301 | Msa0980290:CDS | 60.0% | |
| ! | AGCTCGGTCTGAACCGGCTT+TGG | + | chr6_4:18297467-18297486 | Msa0980290:CDS | 60.0% |
| ! | GCTCGGTCTGAACCGGCTTT+GGG | + | chr6_4:18297468-18297487 | Msa0980290:CDS | 60.0% |
| GGATCCGAGGATGTCCTACG+TGG | + | chr6_4:18297779-18297798 | Msa0980290:CDS | 60.0% | |
| CGATAGGGTGCGTGCTCTTG+CGG | + | chr6_4:18297884-18297903 | Msa0980290:CDS | 60.0% | |
| GATAGGGTGCGTGCTCTTGC+GGG | + | chr6_4:18297885-18297904 | Msa0980290:CDS | 60.0% | |
| ATAGGGTGCGTGCTCTTGCG+GGG | + | chr6_4:18297886-18297905 | Msa0980290:CDS | 60.0% | |
| ATTGGCGACGTTGCAGCCCA+GGG | + | chr6_4:18297924-18297943 | Msa0980290:CDS | 60.0% | |
| TGCAGCCCAGGGTGAGAGAT+TGG | + | chr6_4:18297935-18297954 | Msa0980290:CDS | 60.0% | |
| ! | CTGAGGCATCCGAGGTTTCG+TGG | + | chr6_4:18298083-18298102 | Msa0980290:CDS | 60.0% |
| ! | CCACCGGTTACCGAACCAGC+CGG | + | chr6_4:18295280-18295299 | Msa0980290:CDS | 65.0% |
| !! | GCCGGTGGATTTTCCGGTGC+CGG | - | chr6_4:18295379-18295398 | None:intergenic | 65.0% |
| ACCGGCAATTCCGCCTGCAC+CGG | + | chr6_4:18295393-18295412 | Msa0980290:CDS | 65.0% | |
| TCCGGTGCAGGCGGAATTGC+CGG | - | chr6_4:18295397-18295416 | None:intergenic | 65.0% | |
| TCGTGGCAGTCGGATTCCGG+TGG | + | chr6_4:18295994-18296013 | Msa0980290:CDS | 65.0% | |
| GCCAGGTGGTGCGAGGAGAA+TGG | + | chr6_4:18297281-18297300 | Msa0980290:CDS | 65.0% | |
| CCCATTCTCCTCGCACCACC+TGG | - | chr6_4:18297285-18297304 | None:intergenic | 65.0% | |
| TCTTGCTGACCCGGGCCGAA+TGG | - | chr6_4:18297405-18297424 | None:intergenic | 65.0% | |
| GATTGGCGACGTTGCAGCCC+AGG | + | chr6_4:18297923-18297942 | Msa0980290:CDS | 65.0% | |
| !! | CCGGCTGGTTCGGTAACCGG+TGG | - | chr6_4:18295283-18295302 | None:intergenic | 70.0% |
| GGTGCAGGCGGAATTGCCGG+TGG | - | chr6_4:18295394-18295413 | None:intergenic | 70.0% | |
| GGCAATTCCGCCTGCACCGG+AGG | + | chr6_4:18295396-18295415 | Msa0980290:CDS | 70.0% | |
| GGTGCGTGCTCTTGCGGGGA+GGG | + | chr6_4:18297890-18297909 | Msa0980290:CDS | 70.0% | |
| GGGTGCGTGCTCTTGCGGGG+AGG | + | chr6_4:18297889-18297908 | Msa0980290:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 18294578 | 18298428 | 18294578 | ID=Msa0980290;Name=Msa0980290 |
| chr6_4 | mRNA | 18294578 | 18298428 | 18294578 | ID=Msa0980290-mRNA-1;Parent=Msa0980290;Name=Msa0980290-mRNA-1;_AED=0.00;_eAED=0.00;_QI=177|1|1|1|1|1|2|256|1005 |
| chr6_4 | exon | 18294578 | 18296432 | 18294578 | ID=Msa0980290-mRNA-1:exon:5680;Parent=Msa0980290-mRNA-1 |
| chr6_4 | exon | 18296833 | 18298428 | 18296833 | ID=Msa0980290-mRNA-1:exon:5681;Parent=Msa0980290-mRNA-1 |
| chr6_4 | five_prime_UTR | 18294578 | 18294754 | 18294578 | ID=Msa0980290-mRNA-1:five_prime_utr;Parent=Msa0980290-mRNA-1 |
| chr6_4 | CDS | 18294755 | 18296432 | 18294755 | ID=Msa0980290-mRNA-1:cds;Parent=Msa0980290-mRNA-1 |
| chr6_4 | CDS | 18296833 | 18298172 | 18296833 | ID=Msa0980290-mRNA-1:cds;Parent=Msa0980290-mRNA-1 |
| chr6_4 | three_prime_UTR | 18298173 | 18298428 | 18298173 | ID=Msa0980290-mRNA-1:three_prime_utr;Parent=Msa0980290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
