AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1101160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1101160 MtrunA17_Chr7g0252911 92.143 420 33 0 26 445 17 436 0.0 805
Msa1101160 MtrunA17_Chr7g0252911 92.037 427 15 1 444 851 25 451 0.0 795
Msa1101160 MtrunA17_Chr7g0252891 72.606 449 120 3 1 446 12 460 0.0 656
Msa1101160 MtrunA17_Chr7g0252891 69.767 430 108 3 444 851 45 474 0.0 594
Msa1101160 MtrunA17_Chr4g0015031 72.321 448 122 2 1 446 1 448 0.0 650
Msa1101160 MtrunA17_Chr4g0015031 69.930 429 108 2 444 851 34 462 0.0 594
Msa1101160 MtrunA17_Chr7g0252881 73.223 422 112 1 26 446 17 438 0.0 634
Msa1101160 MtrunA17_Chr7g0252881 71.028 428 104 1 444 851 25 452 0.0 610
Msa1101160 MtrunA17_Chr7g0252921 69.406 438 134 0 11 448 1 438 0.0 624
Msa1101160 MtrunA17_Chr7g0252921 65.581 430 129 1 438 848 18 447 0.0 565
Msa1101160 MtrunA17_Chr7g0252861 56.120 433 187 2 17 448 31 461 6.37e-169 498
Msa1101160 MtrunA17_Chr7g0252861 53.333 420 174 3 445 844 49 466 1.85e-148 445
Msa1101160 MtrunA17_Chr6g0461671 53.630 427 197 1 23 448 50 476 3.15e-154 460
Msa1101160 MtrunA17_Chr6g0461671 51.079 417 184 2 449 845 66 482 7.60e-135 410
Msa1101160 MtrunA17_Chr7g0252941 62.874 167 62 0 252 418 6 172 4.47e-61 205
Msa1101160 MtrunA17_Chr7g0252941 64.138 145 52 0 662 806 6 150 1.74e-50 176
Msa1101160 MtrunA17_Chr7g0252901 87.640 89 11 0 357 445 1 89 4.20e-51 174
Msa1101160 MtrunA17_Chr7g0252901 63.462 104 11 2 767 851 1 96 2.57e-34 126
Msa1101160 MtrunA17_Chr5g0417201 27.754 472 263 20 8 445 42 469 3.00e-34 138
Msa1101160 MtrunA17_Chr5g0417201 30.769 299 170 10 464 738 79 364 3.12e-33 135
Msa1101160 MtrunA17_Chr4g0058831 22.989 348 190 9 17 309 28 352 1.19e-20 97.1
Msa1101160 MtrunA17_Chr4g0058831 22.956 318 180 8 457 719 45 352 3.90e-18 89.0
Msa1101160 MtrunA17_Chr8g0369851 33.158 190 105 4 48 215 96 285 3.06e-20 96.3
Msa1101160 MtrunA17_Chr8g0369851 32.812 192 107 4 456 625 94 285 1.73e-19 94.0
Msa1101160 MtrunA17_Chr7g0252931 51.429 70 30 2 189 256 3 70 1.73e-12 63.5
Msa1101160 MtrunA17_Chr7g0252931 50.000 68 30 2 599 666 7 70 2.59e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1101160 AT5G18280.1 52.567 409 193 1 41 448 58 466 2.96e-147 442
Msa1101160 AT5G18280.1 49.758 414 188 2 451 844 58 471 2.94e-132 404
Msa1101160 AT3G04080.1 50.000 424 211 1 26 448 42 465 6.27e-142 429
Msa1101160 AT3G04080.1 49.502 402 183 2 463 844 69 470 2.58e-127 390
Msa1101160 AT1G14240.1 29.843 382 225 11 446 806 53 412 4.26e-40 155
Msa1101160 AT1G14240.1 28.954 411 247 10 54 444 70 455 1.19e-39 154
Msa1101160 AT1G14240.4 29.843 382 225 11 446 806 53 412 4.26e-40 155
Msa1101160 AT1G14240.4 28.954 411 247 10 54 444 70 455 1.19e-39 154
Msa1101160 AT1G14240.2 29.843 382 225 11 446 806 53 412 4.26e-40 155
Msa1101160 AT1G14240.2 28.954 411 247 10 54 444 70 455 1.19e-39 154
Msa1101160 AT1G14250.1 30.133 375 210 12 455 802 63 412 4.80e-40 155
Msa1101160 AT1G14250.1 28.337 427 246 15 54 449 71 468 9.27e-40 154
Msa1101160 AT1G14230.1 27.505 469 267 14 6 444 42 467 1.88e-39 154
Msa1101160 AT1G14230.1 29.255 376 209 10 464 810 81 428 3.36e-39 153
Msa1101160 AT2G02970.1 28.777 417 249 13 54 445 87 480 3.06e-37 148
Msa1101160 AT2G02970.1 29.076 368 216 11 464 806 87 434 1.91e-35 142
Msa1101160 AT1G14240.3 29.319 382 223 12 446 806 53 408 7.54e-37 145
Msa1101160 AT1G14240.3 28.467 411 245 11 54 444 70 451 2.10e-36 144
Msa1101160 AT4G19180.3 27.170 265 159 7 52 288 143 401 3.37e-17 87.0
Msa1101160 AT4G19180.1 27.170 265 159 7 52 288 143 401 3.37e-17 87.0
Msa1101160 AT4G19180.2 27.170 265 159 7 52 288 143 401 3.37e-17 87.0

Find 206 sgRNAs with CRISPR-Local

Find 655 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTATGTATTGGGGAATT+TGG 0.093358 7_3:+31712934 Msa1101160:CDS
TAACTATGTATTGGGGAATT+TGG 0.093358 7_3:+31718323 Msa1101160:CDS
CCCAAGCCTAAGGGGTGTTT+TGG 0.171551 7_3:-31716010 None:intergenic
TCCTCTCCATCTGCAACTTT+TGG 0.191761 7_3:-31718441 None:intergenic
AGCATGGAATTAGGTTTATT+TGG 0.205910 7_3:-31714521 None:intergenic
AGTATGGAATTAGGTTTATT+TGG 0.217073 7_3:-31719788 None:intergenic
TGCAGGCAACCGCGGGTTTA+AGG 0.218539 7_3:+31711576 Msa1101160:intron
AAAATCTCTCATTCCACTTT+TGG 0.222729 7_3:+31715951 Msa1101160:CDS
AGCACAAGCTTCTTAATATA+TGG 0.233885 7_3:-31713076 None:intergenic
AGCACAAGCTTCTTAATATA+TGG 0.233885 7_3:-31718465 None:intergenic
AACTATGTATTGGGGAATTT+GGG 0.257906 7_3:+31712935 Msa1101160:CDS
AACTATGTATTGGGGAATTT+GGG 0.257906 7_3:+31718324 Msa1101160:CDS
ACTGGATGAAGCATGGAATT+AGG 0.266923 7_3:-31714530 None:intergenic
CCCACATATAAGAACCTTCT+TGG 0.273411 7_3:-31711812 None:intergenic
CCCACATATAAGAACCTTCT+TGG 0.273411 7_3:-31718119 None:intergenic
ACTGGATGAAGTATGGAATT+AGG 0.275392 7_3:-31719797 None:intergenic
CCCAAGCCTAAGGGGTGTTT+TGG 0.282023 7_3:-31709144 None:intergenic
CCCTATCCGAGTTGCACTTT+TGG 0.286988 7_3:+31714300 Msa1101160:CDS
CCCTATCCGAGTTGCACTTT+TGG 0.286988 7_3:+31719572 Msa1101160:CDS
GAGGTTAGGGCTTCTTGTTT+TGG 0.293335 7_3:-31708817 None:intergenic
AAAGGGACCTTTACATATTC+AGG 0.293841 7_3:+31714183 Msa1101160:intron
AAAGGGACCTTTACATATTC+AGG 0.293841 7_3:+31719455 Msa1101160:intron
AAACTTAGGTAACGCTGATA+TGG 0.305974 7_3:-31720348 None:intergenic
TGGAATGGTGGAGGAGGGAG+TGG 0.310304 7_3:+31719602 Msa1101160:CDS
AAAATCTACTGGATGAAGTA+TGG 0.311449 7_3:-31719804 None:intergenic
CAACATGTGTTGCTTGTTCA+TGG 0.317545 7_3:+31714668 Msa1101160:CDS
GTGACAGTTAACTATGTATT+GGG 0.320917 7_3:+31712926 Msa1101160:CDS
GTGACAGTTAACTATGTATT+GGG 0.320917 7_3:+31718315 Msa1101160:CDS
TCTTGTAGTTACTTGCGTTT+TGG 0.327536 7_3:+31713253 Msa1101160:intron
ATATTCAGGAGTGGAGTATA+AGG 0.350913 7_3:+31714197 Msa1101160:CDS
ATATTCAGGAGTGGAGTATA+AGG 0.350913 7_3:+31719469 Msa1101160:CDS
AACCGCGGGTTTAAGGCTTT+TGG 0.352299 7_3:+31711583 Msa1101160:CDS
AATATGATCTCTATGTTCAT+AGG 0.360539 7_3:+31713110 Msa1101160:CDS
AATATGATCTCTATGTTCAT+AGG 0.360539 7_3:+31718499 Msa1101160:CDS
TTGCAAAGAAATAATTCTTA+AGG 0.362668 7_3:+31714254 Msa1101160:CDS
TTGCAAAGAAATAATTCTTA+AGG 0.362668 7_3:+31719526 Msa1101160:CDS
GATGCAGTTTCTATTATTGA+TGG 0.366866 7_3:+31718093 Msa1101160:CDS
GATGCAGTTTCAATTATAGA+TGG 0.368431 7_3:+31711786 Msa1101160:CDS
TGTGAAGTAGATCTAAGTTT+TGG 0.369352 7_3:-31715723 None:intergenic
AATTGAGACTAGTTTCAAAA+TGG 0.369899 7_3:+31708663 Msa1101160:exon
CCAAAACACCCCTTAGGCTT+GGG 0.374595 7_3:+31716010 Msa1101160:CDS
ATATGACAACATACGAGGTT+AGG 0.374979 7_3:-31708831 None:intergenic
GCTTCAATTTCAAAATCTAC+TGG 0.378157 7_3:-31719815 None:intergenic
TACTTCAGCTTTCGCTTACC+TGG 0.385501 7_3:+31714371 Msa1101160:CDS
TACTTCAGCTTTCGCTTACC+TGG 0.385501 7_3:+31719643 Msa1101160:CDS
CCAAAACACCCCTTAGGCTT+GGG 0.387043 7_3:+31709144 Msa1101160:CDS
GCTTCAATTTCGAAATCTAC+TGG 0.387215 7_3:-31714548 None:intergenic
GATCTAAGTTCTGATCAAAA+TGG 0.389966 7_3:-31708891 None:intergenic
TACATTAATCGCTTAAACTT+AGG 0.392460 7_3:-31720362 None:intergenic
TATGACAGCGTAAGAGGTTA+AGG 0.393565 7_3:-31715653 None:intergenic
GTGTTGCTTGTTCATGGATT+TGG 0.395528 7_3:+31714674 Msa1101160:CDS
CTCTCTTCCTCCCAATATCT+TGG 0.395649 7_3:+31708763 Msa1101160:CDS
TGGAATGGTGGAGGAGGGAG+TGG 0.402024 7_3:+31714330 Msa1101160:CDS
TTCTTTGCAATCATCAAAGT+TGG 0.402098 7_3:-31714241 None:intergenic
TTCTTTGCAATCATCAAAGT+TGG 0.402098 7_3:-31719513 None:intergenic
ATCAAATATGACAGCGTAAG+AGG 0.408728 7_3:-31715659 None:intergenic
TCCTCGCCATCAGCAACTTT+AGG 0.413183 7_3:-31713052 None:intergenic
TCTTGTAGTTACTTGCGCTT+TGG 0.424535 7_3:+31718639 Msa1101160:intron
GGTGACAGTTAACTATGTAT+TGG 0.433794 7_3:+31712925 Msa1101160:intron
GGTGACAGTTAACTATGTAT+TGG 0.433794 7_3:+31718314 Msa1101160:intron
CCCAAAACACCCCTTAGGCT+TGG 0.438369 7_3:+31716009 Msa1101160:CDS
CCACATATAAGAACCTTCTT+GGG 0.448076 7_3:-31718118 None:intergenic
AGCTTGTGCATTAAACTTTG+AGG 0.451748 7_3:+31714577 Msa1101160:CDS
AGCTTGTGCATTAAACTTTG+AGG 0.451748 7_3:+31719844 Msa1101160:CDS
CCCAAGAAGGTTCTTATATG+TGG 0.452789 7_3:+31711811 Msa1101160:CDS
CCCAAGAAGGTTCTTATATG+TGG 0.452789 7_3:+31718118 Msa1101160:CDS
AAGAGATCCATGCATACATA+TGG 0.457084 7_3:-31714641 None:intergenic
CCCACTGTAATTTCTTGTTG+AGG 0.459373 7_3:-31714841 None:intergenic
ATTATAGATGGAACCCAAGA+AGG 0.461015 7_3:+31711798 Msa1101160:CDS
TATTGGGAGGAAGAGAGAGC+AGG 0.461825 7_3:-31708757 None:intergenic
ATTATTGATGGAACCCAAGA+AGG 0.464764 7_3:+31718105 Msa1101160:CDS
GTGGAAGCTGCATGGCCTCT+AGG 0.467397 7_3:+31720311 Msa1101160:CDS
GTGGAAGCTGCATGGCCTCT+AGG 0.468068 7_3:+31714892 Msa1101160:CDS
ACAAGAAATTACAGTGGGGC+AGG 0.468961 7_3:+31714846 Msa1101160:CDS
TCCAAAACACCCCTTAGGCT+TGG 0.473783 7_3:+31709143 Msa1101160:CDS
ATCCACTTATCCTCGTCTTA+CGG 0.475381 7_3:+31714607 Msa1101160:CDS
CCACATATAAGAACCTTCTT+GGG 0.475690 7_3:-31711811 None:intergenic
GGAATATGGAATGGTGGAGG+AGG 0.482405 7_3:+31714324 Msa1101160:CDS
GGAATATGGAATGGTGGAGG+AGG 0.482405 7_3:+31719596 Msa1101160:CDS
TGCAGGCAACCGCAGGTTTG+AGG 0.484016 7_3:+31717881 Msa1101160:intron
GAAAACTCACCCCAAGCCTA+AGG 0.486209 7_3:-31716020 None:intergenic
AAACCAGGTTTGAGTGCGTA+TGG 0.488828 7_3:+31715907 Msa1101160:CDS
TACGCTGTCATATTTGATGC+TGG 0.490658 7_3:+31715664 Msa1101160:CDS
TCAAAGTTGGAGCCAGAAGA+AGG 0.491011 7_3:-31714228 None:intergenic
TCAAAGTTGGAGCCAGAAGA+AGG 0.491011 7_3:-31719500 None:intergenic
AATATATTACCATTAAATCC+AGG 0.495788 7_3:-31713340 None:intergenic
TCTTCTGCTTCCTCCAAAAG+TGG 0.496021 7_3:-31715964 None:intergenic
TAAATATTACCATTAAATCC+AGG 0.499439 7_3:-31718726 None:intergenic
TATTAAGAAGCTTGTGCTCA+AGG 0.501262 7_3:+31713081 Msa1101160:CDS
TATTAAGAAGCTTGTGCTCA+AGG 0.501262 7_3:+31718470 Msa1101160:CDS
TATGACAACATACGAGGTTA+GGG 0.506011 7_3:-31708830 None:intergenic
AAAACTCACCCCAAGCCTAA+GGG 0.507438 7_3:-31709153 None:intergenic
CTCTCTGCTTCTTCTAGAAG+TGG 0.508455 7_3:-31709098 None:intergenic
AAATCTTTCGATTAGTGAGT+AGG 0.512314 7_3:-31715615 None:intergenic
TCCGCGTATGCACTCAAACC+TGG 0.513693 7_3:-31709044 None:intergenic
TGCATCACGTTGAACGTTGA+GGG 0.516798 7_3:-31718076 None:intergenic
ATATTTGATGCTGGTAGCAC+TGG 0.520451 7_3:+31708850 Msa1101160:CDS
ATATTTGATGCTGGTAGCAC+TGG 0.520451 7_3:+31715673 Msa1101160:CDS
GAATATGGAATGGTGGAGGA+GGG 0.520495 7_3:+31714325 Msa1101160:CDS
GAATATGGAATGGTGGAGGA+GGG 0.520495 7_3:+31719597 Msa1101160:CDS
CAAAGAAGCAACTCGAGCAC+AGG 0.521520 7_3:+31713276 Msa1101160:CDS
CAAAGAAGCAACTCGAGCAC+AGG 0.521520 7_3:+31718662 Msa1101160:CDS
TCCCCATACGCACTCAAACC+TGG 0.522924 7_3:-31715910 None:intergenic
AAACTAGCTACTAGTGGTAG+AGG 0.525686 7_3:-31708640 None:intergenic
GGAGTAATTGACCTTGGAGG+TGG 0.525763 7_3:+31718369 Msa1101160:CDS
AAAAGCTTCACAAACACAAT+GGG 0.525793 7_3:+31712959 Msa1101160:CDS
CTCTGTAAGACGTGGATAAG+TGG 0.526420 7_3:-31719876 None:intergenic
GAAATGTGATGAGTGTGGTT+AGG 0.529722 7_3:-31708720 None:intergenic
CAAAGTTGGAGCCAGAAGAA+GGG 0.531298 7_3:-31714227 None:intergenic
CAAAGTTGGAGCCAGAAGAA+GGG 0.531298 7_3:-31719499 None:intergenic
AAAACTCACCCCAAGCCTAA+GGG 0.532118 7_3:-31716019 None:intergenic
CAATAAATCAATATATGAGA+TGG 0.532126 7_3:+31708545 None:intergenic
CTCCACTCCTGAATATGTAA+AGG 0.532753 7_3:-31714190 None:intergenic
CTCCACTCCTGAATATGTAA+AGG 0.532753 7_3:-31719462 None:intergenic
TTAAATCCAGGTAAAATGCA+AGG 0.532782 7_3:-31713328 None:intergenic
TTAAATCCAGGTAAAATGCA+AGG 0.532782 7_3:-31718714 None:intergenic
GGAGTAATTGACCTTGGAGG+TGG 0.533198 7_3:+31712980 Msa1101160:CDS
TATGTTGTCATATTTGATGC+TGG 0.538638 7_3:+31708841 Msa1101160:CDS
ACCAAAAGTGCAACTCGGAT+AGG 0.539445 7_3:-31714301 None:intergenic
ACCAAAAGTGCAACTCGGAT+AGG 0.539445 7_3:-31719573 None:intergenic
CCAAAAGTGCAACTCGGATA+GGG 0.540474 7_3:-31714300 None:intergenic
CCAAAAGTGCAACTCGGATA+GGG 0.540474 7_3:-31719572 None:intergenic
AACCAGGTTTGAGTGCGTAT+GGG 0.542174 7_3:+31715908 Msa1101160:CDS
ATAATAATGCAGGCAACCGC+AGG 0.543205 7_3:+31717874 Msa1101160:intron
CTCCGTAAGACGAGGATAAG+TGG 0.547923 7_3:-31714609 None:intergenic
TCAATATCAGAATTCTGTTG+TGG 0.555684 7_3:+31714873 Msa1101160:CDS
TCAATATCAGAATTCTGTTG+TGG 0.555684 7_3:+31720292 Msa1101160:CDS
AATATATGAGATGGAGTGAA+TGG 0.556096 7_3:+31708554 Msa1101160:five_prime_UTR
ATTAAGAAGCTTGTGCTCAA+GGG 0.561023 7_3:+31713082 Msa1101160:CDS
ATTAAGAAGCTTGTGCTCAA+GGG 0.561023 7_3:+31718471 Msa1101160:CDS
AATATTGATGCAGGCAACCG+CGG 0.563655 7_3:+31711568 Msa1101160:intron
AATGCTCCAAAAGTTGCAGA+TGG 0.567798 7_3:+31718435 Msa1101160:CDS
GAAATCTACTGGATGAAGCA+TGG 0.572004 7_3:-31714537 None:intergenic
AAAGAGATTACAGTAGGTGA+GGG 0.573833 7_3:+31720266 Msa1101160:CDS
GTGCAACTCGGATAGGGACA+TGG 0.575560 7_3:-31714294 None:intergenic
GTGCAACTCGGATAGGGACA+TGG 0.575560 7_3:-31719566 None:intergenic
ATATTGATGCAGGCAACCGC+GGG 0.575628 7_3:+31711569 Msa1101160:intron
ACCAGGTTTGAGTGCGTATG+GGG 0.578560 7_3:+31715909 Msa1101160:CDS
TGATATTGAGTTTGTTGACA+AGG 0.580220 7_3:+31715753 Msa1101160:CDS
TTTGGTCAAAATGGTAAACA+TGG 0.580756 7_3:-31715705 None:intergenic
CTGCATCACGTTGAACGTTG+AGG 0.583648 7_3:-31718077 None:intergenic
AATGCTCCTAAAGTTGCTGA+TGG 0.585005 7_3:+31713046 Msa1101160:CDS
CCAAGAAGGTTCTTATATGT+GGG 0.585394 7_3:+31711812 Msa1101160:CDS
AAAAGAGATTACAGTAGGTG+AGG 0.588180 7_3:+31720265 Msa1101160:CDS
AATATAGCATGAGAAAGTGT+AGG 0.588216 7_3:-31708583 None:intergenic
GGAATGGTGGAGGAGGGAGT+GGG 0.590419 7_3:+31719603 Msa1101160:CDS
TTTGGAGGAAGCAGAAGATG+TGG 0.592449 7_3:+31715969 Msa1101160:CDS
GTGGGAGTAATTGACCTTGG+AGG 0.593027 7_3:+31718366 Msa1101160:CDS
CATGAACAAGCAACACATGT+TGG 0.594494 7_3:-31714667 None:intergenic
AAAGTTGGAGCCAGAAGAAG+GGG 0.597511 7_3:-31714226 None:intergenic
AAAGTTGGAGCCAGAAGAAG+GGG 0.597511 7_3:-31719498 None:intergenic
CCAAGAAGGTTCTTATATGT+GGG 0.599714 7_3:+31718119 Msa1101160:CDS
CAAAACACCCCTTAGGCTTG+GGG 0.599749 7_3:+31716011 Msa1101160:CDS
GGTGGAATATGGAATGGTGG+AGG 0.599785 7_3:+31714321 Msa1101160:CDS
GGTGGAATATGGAATGGTGG+AGG 0.599785 7_3:+31719593 Msa1101160:CDS
CAAAACACCCCTTAGGCTTG+GGG 0.601715 7_3:+31709145 Msa1101160:CDS
TCAGTGGGAGTAATTGACCT+TGG 0.602293 7_3:+31718363 Msa1101160:CDS
GACCTTTACATATTCAGGAG+TGG 0.602637 7_3:+31714188 Msa1101160:CDS
GACCTTTACATATTCAGGAG+TGG 0.602637 7_3:+31719460 Msa1101160:CDS
TCTGATCAAAATGGTAGACA+TGG 0.603308 7_3:-31708882 None:intergenic
TGCTGAAAAGATATTGCAAG+CGG 0.605130 7_3:+31711616 Msa1101160:CDS
AACTTAGATCTACTTCACAT+TGG 0.606483 7_3:+31715727 Msa1101160:CDS
ACAATGGGAGTAATTGACCT+TGG 0.607141 7_3:+31712974 Msa1101160:CDS
ATGGGAGTAATTGACCTTGG+AGG 0.607884 7_3:+31712977 Msa1101160:CDS
AAAAGCTTCACAAAATCAGT+GGG 0.611541 7_3:+31718348 Msa1101160:CDS
TAAATCCAGGTAAAATGCAA+GGG 0.612700 7_3:-31713327 None:intergenic
TAAATCCAGGTAAAATGCAA+GGG 0.612700 7_3:-31718713 None:intergenic
GTTGTGATGTAGATCAAACC+AGG 0.612719 7_3:+31715892 Msa1101160:intron
TCCTAAAGTTGCTGATGGCG+AGG 0.613319 7_3:+31713051 Msa1101160:CDS
TCCAAAAGTTGCAGATGGAG+AGG 0.615396 7_3:+31718440 Msa1101160:CDS
CAAGAAATTACAGTGGGGCA+GGG 0.615665 7_3:+31714847 Msa1101160:CDS
CCTCAACAAGAAATTACAGT+GGG 0.620628 7_3:+31714841 Msa1101160:CDS
TTTGGTGGAATATGGAATGG+TGG 0.623058 7_3:+31714318 Msa1101160:CDS
TTTGGTGGAATATGGAATGG+TGG 0.623058 7_3:+31719590 Msa1101160:CDS
TCAATTAAACTAGCTACTAG+TGG 0.623394 7_3:-31708646 None:intergenic
ACCAGGTTTGAGTGCATACG+CGG 0.623511 7_3:+31709043 Msa1101160:CDS
AGCAGAAGATGTGGTTCCTG+AGG 0.623737 7_3:+31715978 Msa1101160:CDS
TGCTGAAAAGATATTGCAAG+CGG 0.630726 7_3:+31717921 Msa1101160:CDS
ATCCAAAAGCCTTAAACCCG+CGG 0.630783 7_3:-31711585 None:intergenic
AAACTCACCCCAAGCCTAAG+GGG 0.631016 7_3:-31709152 None:intergenic
TTTGAACTGAACCACCTCCA+AGG 0.632699 7_3:-31712991 None:intergenic
TTTGAACTGAACCACCTCCA+AGG 0.632699 7_3:-31718380 None:intergenic
AAACTCACCCCAAGCCTAAG+GGG 0.632954 7_3:-31716018 None:intergenic
CAAAATGGTAGACATGGACA+CGG 0.633528 7_3:-31708876 None:intergenic
ATTCTGTTGTGGAAGCTGCA+TGG 0.638309 7_3:+31714884 Msa1101160:CDS
ATTCTGTTGTGGAAGCTGCA+TGG 0.638309 7_3:+31720303 Msa1101160:CDS
CACTTATCCTCGTCTTACGG+AGG 0.642737 7_3:+31714610 Msa1101160:CDS
CCACGAAAAGAGATTACAGT+AGG 0.642945 7_3:+31720260 Msa1101160:CDS
TGATATTGAGTTTGTTGACA+AGG 0.645926 7_3:+31708930 Msa1101160:CDS
TGCACCCCAAAACACCCCTT+AGG 0.647295 7_3:+31716004 Msa1101160:CDS
AAAACGTCCATATGTATGCA+TGG 0.648697 7_3:+31714634 Msa1101160:CDS
ATTCAAAAGCCTCAAACCTG+CGG 0.651264 7_3:-31717890 None:intergenic
TGCACTCCAAAACACCCCTT+AGG 0.653249 7_3:+31709138 Msa1101160:CDS
CACTTATCCACGTCTTACAG+AGG 0.653327 7_3:+31719877 Msa1101160:CDS
ATGGCCTCTAGGCACTGCTG+TGG 0.653909 7_3:+31720322 Msa1101160:CDS
GAGTAGAAATGTGATGAGTG+TGG 0.655156 7_3:-31708725 None:intergenic
ATTCCACCAAAAGTGCAACT+CGG 0.665214 7_3:-31714306 None:intergenic
ATTCCACCAAAAGTGCAACT+CGG 0.665214 7_3:-31719578 None:intergenic
GATGTTATATAGATCAAACC+AGG 0.666409 7_3:+31709026 Msa1101160:intron
TGACAGTTAACTATGTATTG+GGG 0.677718 7_3:+31712927 Msa1101160:CDS
TGACAGTTAACTATGTATTG+GGG 0.677718 7_3:+31718316 Msa1101160:CDS
GCTTCCACAGCAGTGCCTAG+AGG 0.681896 7_3:-31720326 None:intergenic
ATCAAATATGACAACATACG+AGG 0.698857 7_3:-31708836 None:intergenic
TCCTCAACAAGAAATTACAG+TGG 0.705806 7_3:+31714840 Msa1101160:CDS
AAAATGGTAGACATGGACAC+GGG 0.710777 7_3:-31708875 None:intergenic
CTCAACAAGAAATTACAGTG+GGG 0.779971 7_3:+31714842 Msa1101160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTAAAAAAAA+AGG + chr7_3:31717583-31717602 Msa1101160:intron 0.0%
!!! ATTTTCAGTATAATTTTTTT+TGG + chr7_3:31710182-31710201 Msa1101160:intron 10.0%
!!! TTTTTGAAAATGATTTTTTA+CGG + chr7_3:31710246-31710265 Msa1101160:intron 10.0%
!! ATCATATTTAATTATTCATT+TGG + chr7_3:31711909-31711928 Msa1101160:intron 10.0%
!!! TTTATTTTTTTAAGCAAATA+TGG + chr7_3:31713926-31713945 Msa1101160:intron 10.0%
!!! AATTTTTTTTTTTTTTAGGT+TGG + chr7_3:31714488-31714507 Msa1101160:intron 10.0%
!!! ATGTAATTTTTTTTAAACAA+AGG - chr7_3:31715802-31715821 None:intergenic 10.0%
!! ATGTATATATTATATATGAA+TGG + chr7_3:31718584-31718603 Msa1101160:intron 10.0%
!!! TTATTTTTTTTAAGCAAATA+GGG + chr7_3:31719223-31719242 Msa1101160:intron 10.0%
!! TAAAAAACATTATTACATCA+TGG + chr7_3:31709305-31709324 Msa1101160:intron 15.0%
!! AAAAAACATTATTACATCAT+GGG + chr7_3:31709306-31709325 Msa1101160:intron 15.0%
!!! AAATGAATTTTATGAAGATA+AGG - chr7_3:31709348-31709367 None:intergenic 15.0%
!! TAAGATTAAATCTAAATTGT+CGG + chr7_3:31709682-31709701 Msa1101160:intron 15.0%
!! ATATTGAAGCAAAATAAAAA+GGG + chr7_3:31709855-31709874 Msa1101160:intron 15.0%
!!! TACTTTTTTTTTTTTGTTGA+GGG - chr7_3:31709928-31709947 None:intergenic 15.0%
!!! CCTTTTTTGATTTATTAATA+AGG - chr7_3:31710066-31710085 None:intergenic 15.0%
!! CCTTATTAATAAATCAAAAA+AGG + chr7_3:31710063-31710082 Msa1101160:intron 15.0%
!!! ACAGATCTTTTTAAATAAAT+AGG + chr7_3:31710469-31710488 Msa1101160:intron 15.0%
!! TGAATATTAGTATATACTTT+AGG - chr7_3:31711512-31711531 None:intergenic 15.0%
!! ATATACTAATATTCATCAAT+TGG + chr7_3:31711517-31711536 Msa1101160:intron 15.0%
!!! TTTTTTAAAAAAAAACCTTG+TGG + chr7_3:31711979-31711998 Msa1101160:intron 15.0%
!!! TTTTTAAAAAAAAACCTTGT+GGG + chr7_3:31711980-31711999 Msa1101160:intron 15.0%
!!! ACTTCAATAATTTTTTTTTG+AGG - chr7_3:31712632-31712651 None:intergenic 15.0%
!! TTATGTTAATTAAACAAGTT+TGG - chr7_3:31712745-31712764 None:intergenic 15.0%
!!! TAATTTGTAAATTTGATACT+TGG + chr7_3:31712892-31712911 Msa1101160:intron 15.0%
!! AGTTAAAATATCTACATATA+TGG - chr7_3:31713457-31713476 None:intergenic 15.0%
!!! AAATGTTTTTAACAAGTAAA+TGG + chr7_3:31714775-31714794 Msa1101160:intron 15.0%
!!! GAGATTAATGTATTTTATTT+AGG + chr7_3:31714954-31714973 Msa1101160:intron 15.0%
!!! AAATATTTCAAGTATTTCAA+CGG + chr7_3:31714992-31715011 Msa1101160:intron 15.0%
!! AATTTAATTCTTGATAAAGT+TGG - chr7_3:31715024-31715043 None:intergenic 15.0%
!!! AAGATTTTTTTTTTTGAACA+AGG + chr7_3:31716970-31716989 Msa1101160:intron 15.0%
!!! ATATGTTATCTTTTGTAAAA+GGG - chr7_3:31717735-31717754 None:intergenic 15.0%
!!! AATATGTTATCTTTTGTAAA+AGG - chr7_3:31717736-31717755 None:intergenic 15.0%
!! GCATTATTATCATATAAATT+TGG - chr7_3:31717864-31717883 None:intergenic 15.0%
!! AATTTATATGATAATAATGC+AGG + chr7_3:31717864-31717883 Msa1101160:intron 15.0%
!!! TTCTTTATGGAATTTTTTTT+TGG + chr7_3:31718167-31718186 Msa1101160:intron 15.0%
!!! TCTTTATGGAATTTTTTTTT+GGG + chr7_3:31718168-31718187 Msa1101160:intron 15.0%
!!! TTTAGTACACTTTTTTTTAT+TGG + chr7_3:31719033-31719052 Msa1101160:intron 15.0%
!!! TTAGTACACTTTTTTTTATT+GGG + chr7_3:31719034-31719053 Msa1101160:intron 15.0%
!!! CTTATTTTTTTTAAGCAAAT+AGG + chr7_3:31719222-31719241 Msa1101160:intron 15.0%
!!! GTTTAATTTTTTTTTTAGGT+TGG + chr7_3:31719755-31719774 Msa1101160:intron 15.0%
!!! TATGTTTTTTCCAAGATATT+GGG - chr7_3:31708776-31708795 None:intergenic 20.0%
!!! TGTCTTAATTTTGAGTTTTT+TGG + chr7_3:31709221-31709240 Msa1101160:intron 20.0%
!! TCAAACTATTTGATGAATTA+TGG + chr7_3:31709264-31709283 Msa1101160:intron 20.0%
!! AATTATGGAATATCAACAAA+AGG + chr7_3:31709279-31709298 Msa1101160:intron 20.0%
!!! TTTGGTTTTCTAATATTAAG+AGG + chr7_3:31709767-31709786 Msa1101160:intron 20.0%
!! GATATTGAAGCAAAATAAAA+AGG + chr7_3:31709854-31709873 Msa1101160:intron 20.0%
!! TATTGAAGCAAAATAAAAAG+GGG + chr7_3:31709856-31709875 Msa1101160:intron 20.0%
!!! GTACTTTTTTTTTTTTGTTG+AGG - chr7_3:31709929-31709948 None:intergenic 20.0%
!!! TTTTAAATATTTCTTCTCTC+TGG + chr7_3:31710368-31710387 Msa1101160:intron 20.0%
!!! TTTTTTTTTTTGGTAAGACT+AGG - chr7_3:31710843-31710862 None:intergenic 20.0%
!! AACAATTAGCATTTGTTTAT+AGG + chr7_3:31711218-31711237 Msa1101160:intron 20.0%
!! AAATGTTTATAGTATAGCTA+GGG - chr7_3:31711458-31711477 None:intergenic 20.0%
!! AAAATGTTTATAGTATAGCT+AGG - chr7_3:31711459-31711478 None:intergenic 20.0%
!! ATGTGTTTATAATATAGCTA+AGG - chr7_3:31711484-31711503 None:intergenic 20.0%
!!! AAGCTTTAATTTTCTTGATT+AGG + chr7_3:31711719-31711738 Msa1101160:intron 20.0%
!!! TTAATTTTCTTGATTAGGTA+AGG + chr7_3:31711724-31711743 Msa1101160:intron 20.0%
!!! TAATTTTCTTGATTAGGTAA+GGG + chr7_3:31711725-31711744 Msa1101160:intron 20.0%
!! TAAAATTAAAGTTTCGTGAA+TGG + chr7_3:31711848-31711867 Msa1101160:intron 20.0%
!!! TGAATGGTATTATATACTTT+TGG + chr7_3:31711864-31711883 Msa1101160:intron 20.0%
!! AAGAAAATGAATTAAGAAAG+GGG - chr7_3:31711951-31711970 None:intergenic 20.0%
!! GAAGAAAATGAATTAAGAAA+GGG - chr7_3:31711952-31711971 None:intergenic 20.0%
!! AGAAGAAAATGAATTAAGAA+AGG - chr7_3:31711953-31711972 None:intergenic 20.0%
!! GAACATTAATTAAGTATAAG+TGG + chr7_3:31712002-31712021 Msa1101160:intron 20.0%
!!! TGAGTTTTTATCCTAAAATT+AGG - chr7_3:31712066-31712085 None:intergenic 20.0%
!! TGTTTATCGAAATGAAATAA+TGG - chr7_3:31712199-31712218 None:intergenic 20.0%
!!! AAGGAGTATATTGTTTTTAA+AGG - chr7_3:31712499-31712518 None:intergenic 20.0%
!! TACTCCTTAATTAAATTATG+TGG + chr7_3:31712511-31712530 Msa1101160:intron 20.0%
!! AAACAACTTCAATAATTGTT+GGG - chr7_3:31712607-31712626 None:intergenic 20.0%
!! AAAACAACTTCAATAATTGT+TGG - chr7_3:31712608-31712627 None:intergenic 20.0%
!! ATAATATTAGAGTTAGACTA+AGG + chr7_3:31712761-31712780 Msa1101160:intron 20.0%
!! ATTCTTGATGTATATATGAA+TGG + chr7_3:31713196-31713215 Msa1101160:intron 20.0%
!! AATATATTACCATTAAATCC+AGG - chr7_3:31713343-31713362 None:intergenic 20.0%
!! ATCATTTAGAAATTCAATGT+TGG + chr7_3:31713513-31713532 Msa1101160:intron 20.0%
!!! TTTGTAGTACACTTTTTTAT+TGG + chr7_3:31713736-31713755 Msa1101160:intron 20.0%
!!! TTGTAGTACACTTTTTTATT+GGG + chr7_3:31713737-31713756 Msa1101160:intron 20.0%
!!! AAATATTTGAGTTACTAGTT+TGG + chr7_3:31713789-31713808 Msa1101160:intron 20.0%
!! AATTTGATCTATATACTTTG+AGG - chr7_3:31713837-31713856 None:intergenic 20.0%
!! TTGCAAAGAAATAATTCTTA+AGG + chr7_3:31714254-31714273 Msa1101160:CDS 20.0%
!!! TTTTTTTTTTTAGGTTGGTA+TGG + chr7_3:31714493-31714512 Msa1101160:intron 20.0%
!!! AAATTTGTGATACTTTTCTT+TGG - chr7_3:31714752-31714771 None:intergenic 20.0%
!! TACATTAATCTCTCAAATTT+AGG - chr7_3:31714946-31714965 None:intergenic 20.0%
!! AAGATAGACTCATTATAATA+TGG - chr7_3:31715375-31715394 None:intergenic 20.0%
!! TAAATTATGTTATAATTCGC+TGG - chr7_3:31715400-31715419 None:intergenic 20.0%
!!! ATTTTTTTTTGCATGAATTC+CGG + chr7_3:31716102-31716121 Msa1101160:intron 20.0%
!! ACTTAAAGTTTGATCTTAAT+TGG - chr7_3:31716287-31716306 None:intergenic 20.0%
!! TTCAAAATTTACAATGAGAA+CGG + chr7_3:31716495-31716514 Msa1101160:intron 20.0%
!! TAAGCTTAAGTTAATTCAAA+TGG + chr7_3:31716896-31716915 Msa1101160:intron 20.0%
!! AACTTGTAAAAAAAGATCAT+AGG + chr7_3:31717422-31717441 Msa1101160:intron 20.0%
!! ACTTGTAAAAAAAGATCATA+GGG + chr7_3:31717423-31717442 Msa1101160:intron 20.0%
!! AAAAAAAAAAAGTAGTCAAG+TGG - chr7_3:31717498-31717517 None:intergenic 20.0%
!!! CAGAATATATTGATTATATG+TGG + chr7_3:31718228-31718247 Msa1101160:intron 20.0%
!! TAAATATTACCATTAAATCC+AGG - chr7_3:31718729-31718748 None:intergenic 20.0%
!!! AAATATTTGAGTTACTAGTT+TGG + chr7_3:31713789-31713808 Msa1101160:intron 20.0%
!! AATTTGATCTATATACTTTG+AGG - chr7_3:31713837-31713856 None:intergenic 20.0%
!!! AAAAGTAGTTACTTTGTTAT+TGG - chr7_3:31719423-31719442 None:intergenic 20.0%
!!! ACTTTTTTTTTCTTCTTCAA+AGG + chr7_3:31719437-31719456 Msa1101160:intron 20.0%
!!! CTTTTTTTTTCTTCTTCAAA+GGG + chr7_3:31719438-31719457 Msa1101160:intron 20.0%
!! TTGCAAAGAAATAATTCTTA+AGG + chr7_3:31714254-31714273 Msa1101160:CDS 20.0%
!!! ATTTTTTTTTTAGGTTGGTA+TGG + chr7_3:31719760-31719779 Msa1101160:intron 20.0%
!!! ACGAATCAATTTTTTCAATA+GGG - chr7_3:31720003-31720022 None:intergenic 20.0%
!!! TACGAATCAATTTTTTCAAT+AGG - chr7_3:31720004-31720023 None:intergenic 20.0%
!! ATTCGATAATCGATATATTA+AGG + chr7_3:31720060-31720079 Msa1101160:intron 20.0%
!!! AATTGAGACTAGTTTCAAAA+TGG + chr7_3:31708663-31708682 Msa1101160:exon 25.0%
!!! GTATGTTTTTTCCAAGATAT+TGG - chr7_3:31708777-31708796 None:intergenic 25.0%
! TCAAATAGTTTGATTATGTG+TGG - chr7_3:31709257-31709276 None:intergenic 25.0%
!! TATAAAAGCATGTTGATTGT+GGG - chr7_3:31709729-31709748 None:intergenic 25.0%
!! AAAGTACAAACTTGTTTGTT+TGG + chr7_3:31709942-31709961 Msa1101160:intron 25.0%
! AAAAAAAAAAAGTGACGCTA+CGG + chr7_3:31710852-31710871 Msa1101160:intron 25.0%
!! AAAAGTAGTAACTTTTGCAT+TGG + chr7_3:31711282-31711301 Msa1101160:intron 25.0%
!! AAGACAATATTTCCTTTTGT+GGG + chr7_3:31711350-31711369 Msa1101160:intron 25.0%
! AATTTGTAGAATATTGATGC+AGG + chr7_3:31711559-31711578 Msa1101160:intron 25.0%
!!! TAATCTTAATTTGCATCCAA+TGG + chr7_3:31711693-31711712 Msa1101160:intron 25.0%
!! AAAATTAAAGCTTTAGCCAT+TGG - chr7_3:31711712-31711731 None:intergenic 25.0%
! GACACCACATAATTTAATTA+AGG - chr7_3:31712518-31712537 None:intergenic 25.0%
!! TCCTTTAATAAGCTAACTTT+TGG + chr7_3:31712711-31712730 Msa1101160:intron 25.0%
!! CCTTTAATAAGCTAACTTTT+GGG + chr7_3:31712712-31712731 Msa1101160:intron 25.0%
! TTAGACTAAGGATTGAAATA+TGG + chr7_3:31712773-31712792 Msa1101160:intron 25.0%
! TAGACTAAGGATTGAAATAT+GGG + chr7_3:31712774-31712793 Msa1101160:intron 25.0%
!! TGGTAGATATTGAATTTGTT+TGG + chr7_3:31712833-31712852 Msa1101160:intron 25.0%
! AATATGATCTCTATGTTCAT+AGG + chr7_3:31713110-31713129 Msa1101160:CDS 25.0%
!!! TCGATTTTTTTACATACTAC+TGG + chr7_3:31713382-31713401 Msa1101160:intron 25.0%
! CTTTCTCAACAAAAGATATA+CGG - chr7_3:31713706-31713725 None:intergenic 25.0%
!! AGAAGTAGTTACTTTGTTAT+TGG - chr7_3:31714149-31714168 None:intergenic 25.0%
!! TTCTTTTTCTTCTTCTTCAA+AGG + chr7_3:31714165-31714184 Msa1101160:intron 25.0%
!! TCTTTTTCTTCTTCTTCAAA+GGG + chr7_3:31714166-31714185 Msa1101160:intron 25.0%
! ATAGAGTTAAGACAATCATT+AGG - chr7_3:31714803-31714822 None:intergenic 25.0%
! ATTGTCTTAACTCTATTTGT+TGG + chr7_3:31714807-31714826 Msa1101160:intron 25.0%
! GATATCTACTAAATGTATCA+CGG - chr7_3:31715231-31715250 None:intergenic 25.0%
! ATAATATGGACATATGGTTA+TGG - chr7_3:31715361-31715380 None:intergenic 25.0%
! CTCATTATAATATGGACATA+TGG - chr7_3:31715367-31715386 None:intergenic 25.0%
!!! TATTTCATCTTCACTTTTTC+CGG + chr7_3:31715463-31715482 Msa1101160:intron 25.0%
! CATTAACAAGAGTAAAAAAG+TGG - chr7_3:31715560-31715579 None:intergenic 25.0%
!! CAAGGTTAGATTTTCAATAT+TGG + chr7_3:31715771-31715790 Msa1101160:intron 25.0%
!!! TTTTTTTTTGCATGAATTCC+GGG + chr7_3:31716103-31716122 Msa1101160:intron 25.0%
! TTAAATAGAGATGATTCCAA+TGG - chr7_3:31716141-31716160 None:intergenic 25.0%
! ATATCATAGATTATTAGCGT+AGG + chr7_3:31716171-31716190 Msa1101160:intron 25.0%
! AAAAAATAAGTCACTCCAAA+CGG - chr7_3:31716697-31716716 None:intergenic 25.0%
!!! ATTCTTCATTGTTTTTGCTT+TGG - chr7_3:31717109-31717128 None:intergenic 25.0%
!! AATTTGGTTACATTCACTTT+TGG - chr7_3:31717188-31717207 None:intergenic 25.0%
! TAACATTCTTGACAAAGTTA+AGG - chr7_3:31717237-31717256 None:intergenic 25.0%
! ACTTTGTCAAGAATGTTATA+AGG + chr7_3:31717239-31717258 Msa1101160:intron 25.0%
!!! CATTCGAGTTTTCAAAAATA+CGG - chr7_3:31717273-31717292 None:intergenic 25.0%
! ATCTTCTCATTTATTCTTGA+AGG - chr7_3:31717341-31717360 None:intergenic 25.0%
!!! AGTCAAGTGGTATTTTTATA+TGG - chr7_3:31717485-31717504 None:intergenic 25.0%
! AAACCACATAAATGTTCAAT+TGG + chr7_3:31717763-31717782 Msa1101160:intron 25.0%
! TAACCAATTGAACATTTATG+TGG - chr7_3:31717769-31717788 None:intergenic 25.0%
! TTTAGCAACTATACCTTAAT+TGG + chr7_3:31717988-31718007 Msa1101160:intron 25.0%
! ACACTTATAATGAATATTGG+GGG - chr7_3:31718275-31718294 None:intergenic 25.0%
! CACACTTATAATGAATATTG+GGG - chr7_3:31718276-31718295 None:intergenic 25.0%
! GCACACTTATAATGAATATT+GGG - chr7_3:31718277-31718296 None:intergenic 25.0%
! AATATGATCTCTATGTTCAT+AGG + chr7_3:31713110-31713129 Msa1101160:CDS 25.0%
! TGGCTAATTAATGTATATTG+AGG + chr7_3:31718604-31718623 Msa1101160:intron 25.0%
! ATCATTCAGAAATTCAATGT+TGG + chr7_3:31718802-31718821 Msa1101160:intron 25.0%
!!! TGACAATTTTGTTGTTGTTT+CGG - chr7_3:31719161-31719180 None:intergenic 25.0%
! AGTATGGAATTAGGTTTATT+TGG - chr7_3:31719791-31719810 None:intergenic 25.0%
AATATATGAGATGGAGTGAA+TGG + chr7_3:31708554-31708573 Msa1101160:five_prime_UTR 30.0%
! AATATAGCATGAGAAAGTGT+AGG - chr7_3:31708586-31708605 None:intergenic 30.0%
TCAATTAAACTAGCTACTAG+TGG - chr7_3:31708649-31708668 None:intergenic 30.0%
ATCAAATATGACAACATACG+AGG - chr7_3:31708839-31708858 None:intergenic 30.0%
TATGTTGTCATATTTGATGC+TGG + chr7_3:31708841-31708860 Msa1101160:CDS 30.0%
! GATCTAAGTTCTGATCAAAA+TGG - chr7_3:31708894-31708913 None:intergenic 30.0%
!! TGATATTGAGTTTGTTGACA+AGG + chr7_3:31708930-31708949 Msa1101160:CDS 30.0%
GATGTTATATAGATCAAACC+AGG + chr7_3:31709026-31709045 Msa1101160:intron 30.0%
AGATATGAACAAAAACACCA+AGG - chr7_3:31709458-31709477 None:intergenic 30.0%
! TTTTAGATGAGAGAGAATGT+TGG - chr7_3:31709534-31709553 None:intergenic 30.0%
! CTATAAAAGCATGTTGATTG+TGG - chr7_3:31709730-31709749 None:intergenic 30.0%
! TGATCTTGACATTTTCCTAA+TGG - chr7_3:31709886-31709905 None:intergenic 30.0%
AGTGACGAAACAGTAAAAAA+AGG + chr7_3:31709966-31709985 Msa1101160:intron 30.0%
GTGACGAAACAGTAAAAAAA+GGG + chr7_3:31709967-31709986 Msa1101160:intron 30.0%
TGACGAAACAGTAAAAAAAG+GGG + chr7_3:31709968-31709987 Msa1101160:intron 30.0%
CTCTAGCTATCAAATTACAA+AGG + chr7_3:31710039-31710058 Msa1101160:intron 30.0%
ATTATAGCTCTTAGAAATCG+TGG + chr7_3:31710701-31710720 Msa1101160:intron 30.0%
GACAATGTGTTTATAAGTAG+AGG - chr7_3:31710774-31710793 None:intergenic 30.0%
CTACTTATAAACACATTGTC+AGG + chr7_3:31710774-31710793 Msa1101160:intron 30.0%
!!! GTAGCGTCACTTTTTTTTTT+TGG - chr7_3:31710853-31710872 None:intergenic 30.0%
AAAAAAAAAAGTGACGCTAC+GGG + chr7_3:31710853-31710872 Msa1101160:intron 30.0%
ATGCTTAAACAATGTCCTAA+GGG - chr7_3:31711260-31711279 None:intergenic 30.0%
AATGCTTAAACAATGTCCTA+AGG - chr7_3:31711261-31711280 None:intergenic 30.0%
! CAAGACAATATTTCCTTTTG+TGG + chr7_3:31711349-31711368 Msa1101160:intron 30.0%
TTCCTTAAACAATGCCTTTA+GGG + chr7_3:31711373-31711392 Msa1101160:intron 30.0%
GATGCAGTTTCAATTATAGA+TGG + chr7_3:31711786-31711805 Msa1101160:CDS 30.0%
ACTTAATTAATGTTCCCACA+AGG - chr7_3:31711997-31712016 None:intergenic 30.0%
!! TTAGAGCTTCTTTGAAACTA+TGG + chr7_3:31712168-31712187 Msa1101160:intron 30.0%
! TTAGTGGCTTGGAATAAATT+TGG - chr7_3:31712242-31712261 None:intergenic 30.0%
ATGAGCGAGTAAATTATGAT+GGG - chr7_3:31712420-31712439 None:intergenic 30.0%
TATGAGCGAGTAAATTATGA+TGG - chr7_3:31712421-31712440 None:intergenic 30.0%
AAAGGAATATATCGACCAAA+CGG - chr7_3:31712481-31712500 None:intergenic 30.0%
AATAATTGTTGGGTCATGAA+CGG - chr7_3:31712597-31712616 None:intergenic 30.0%
! GTTAGCTTATTAAAGGATGA+AGG - chr7_3:31712708-31712727 None:intergenic 30.0%
! CCCAAAAGTTAGCTTATTAA+AGG - chr7_3:31712715-31712734 None:intergenic 30.0%
! TCATGTCTAGAATGAATCTT+GGG - chr7_3:31712807-31712826 None:intergenic 30.0%
! ATCATGTCTAGAATGAATCT+TGG - chr7_3:31712808-31712827 None:intergenic 30.0%
AAGATTCATTCTAGACATGA+TGG + chr7_3:31712807-31712826 Msa1101160:intron 30.0%
TTGATACTTGGCATCTTTAT+AGG + chr7_3:31712904-31712923 Msa1101160:intron 30.0%
GTGACAGTTAACTATGTATT+GGG + chr7_3:31712926-31712945 Msa1101160:CDS 30.0%
TGACAGTTAACTATGTATTG+GGG + chr7_3:31712927-31712946 Msa1101160:CDS 30.0%
TAACTATGTATTGGGGAATT+TGG + chr7_3:31712934-31712953 Msa1101160:CDS 30.0%
AACTATGTATTGGGGAATTT+GGG + chr7_3:31712935-31712954 Msa1101160:CDS 30.0%
AAAAAGCTTCACAAACACAA+TGG + chr7_3:31712958-31712977 Msa1101160:CDS 30.0%
AAAAGCTTCACAAACACAAT+GGG + chr7_3:31712959-31712978 Msa1101160:CDS 30.0%
AGCACAAGCTTCTTAATATA+TGG - chr7_3:31713079-31713098 None:intergenic 30.0%
TAAATCCAGGTAAAATGCAA+GGG - chr7_3:31713330-31713349 None:intergenic 30.0%
TTAAATCCAGGTAAAATGCA+AGG - chr7_3:31713331-31713350 None:intergenic 30.0%
! TGCATTTTACCTGGATTTAA+TGG + chr7_3:31713331-31713350 Msa1101160:CDS 30.0%
GATGTGTTATCGAAAATAAG+AGG - chr7_3:31713414-31713433 None:intergenic 30.0%
ATGATGTTTGAACAAGTGTA+AGG + chr7_3:31713654-31713673 Msa1101160:intron 30.0%
!!! TGACAATTTTGCTGTTGTTT+CGG - chr7_3:31713864-31713883 None:intergenic 30.0%
TTCTTTGCAATCATCAAAGT+TGG - chr7_3:31714244-31714263 None:intergenic 30.0%
AGCATGGAATTAGGTTTATT+TGG - chr7_3:31714524-31714543 None:intergenic 30.0%
TCAATATCAGAATTCTGTTG+TGG + chr7_3:31714873-31714892 Msa1101160:CDS 30.0%
TTATACTGATCTTGTGGATA+TGG + chr7_3:31715089-31715108 Msa1101160:intron 30.0%
CCATTTAAGCAAAGATCTAA+CGG - chr7_3:31715316-31715335 None:intergenic 30.0%
CTTTGCTTAAATGGAAAACA+TGG + chr7_3:31715322-31715341 Msa1101160:intron 30.0%
ACCAACACAAATTAAGAACA+TGG + chr7_3:31715513-31715532 Msa1101160:intron 30.0%
!! TCCATGTTCTTAATTTGTGT+TGG - chr7_3:31715517-31715536 None:intergenic 30.0%
ATCACTACCTCACAATATTT+AGG + chr7_3:31715586-31715605 Msa1101160:intron 30.0%
! GTTGTTTCCTAAATATTGTG+AGG - chr7_3:31715596-31715615 None:intergenic 30.0%
AAATCTTTCGATTAGTGAGT+AGG - chr7_3:31708795-31708814 None:intergenic 30.0%
!!! AGGTTAAGGTTTCTTGTTTT+TGG - chr7_3:31715642-31715661 None:intergenic 30.0%
TTTGGTCAAAATGGTAAACA+TGG - chr7_3:31715708-31715727 None:intergenic 30.0%
!! GATCTAAGTTTTGGTCAAAA+TGG - chr7_3:31715717-31715736 None:intergenic 30.0%
! TGTGAAGTAGATCTAAGTTT+TGG - chr7_3:31715726-31715745 None:intergenic 30.0%
AACTTAGATCTACTTCACAT+TGG + chr7_3:31708904-31708923 Msa1101160:CDS 30.0%
!! TGATATTGAGTTTGTTGACA+AGG + chr7_3:31708930-31708949 Msa1101160:CDS 30.0%
! AAAATCTCTCATTCCACTTT+TGG + chr7_3:31715951-31715970 Msa1101160:CDS 30.0%
ACAGGTGAGAAATAGTAAAA+TGG - chr7_3:31716057-31716076 None:intergenic 30.0%
AAGACACAAAGTAAACTAAC+AGG - chr7_3:31716075-31716094 None:intergenic 30.0%
CAATGGAAATAATTCATTCC+CGG - chr7_3:31716124-31716143 None:intergenic 30.0%
CTTATCATAGATCTTAGTTG+CGG + chr7_3:31716217-31716236 Msa1101160:intron 30.0%
AAATTTACAATGAGAACGGT+TGG + chr7_3:31716499-31716518 Msa1101160:intron 30.0%
GTGACTTTGTAACATACTTT+GGG - chr7_3:31717063-31717082 None:intergenic 30.0%
AAAGTATGTTACAAAGTCAC+CGG + chr7_3:31717063-31717082 Msa1101160:intron 30.0%
TTAAGGTTAATTCCTTCTTG+TGG - chr7_3:31717220-31717239 None:intergenic 30.0%
GTCAAGAATGTTATAAGGAT+CGG + chr7_3:31717244-31717263 Msa1101160:intron 30.0%
TCTTGAAGGTTATTTGACTA+TGG - chr7_3:31717327-31717346 None:intergenic 30.0%
AAGAATAAATGAGAAGATCG+CGG + chr7_3:31717343-31717362 Msa1101160:intron 30.0%
! TGTCTATACATGTTACCTTT+TGG + chr7_3:31717607-31717626 Msa1101160:intron 30.0%
ACTAGAGTTTGAATTCCAAA+AGG - chr7_3:31717625-31717644 None:intergenic 30.0%
! TAGCAAATGCTGCTTAATTA+TGG - chr7_3:31717950-31717969 None:intergenic 30.0%
GGTAAGAAAACAAAAGCTTT+AGG - chr7_3:31718024-31718043 None:intergenic 30.0%
! TTGTTTTCTTACCTTAGACA+AGG + chr7_3:31718031-31718050 Msa1101160:intron 30.0%
GATGCAGTTTCTATTATTGA+TGG + chr7_3:31718093-31718112 Msa1101160:CDS 30.0%
CGCACACTTATAATGAATAT+TGG - chr7_3:31718278-31718297 None:intergenic 30.0%
GTGCGTATGTATATCTTTAT+AGG + chr7_3:31718293-31718312 Msa1101160:intron 30.0%
GTGACAGTTAACTATGTATT+GGG + chr7_3:31712926-31712945 Msa1101160:CDS 30.0%
TGACAGTTAACTATGTATTG+GGG + chr7_3:31712927-31712946 Msa1101160:CDS 30.0%
TAACTATGTATTGGGGAATT+TGG + chr7_3:31712934-31712953 Msa1101160:CDS 30.0%
AACTATGTATTGGGGAATTT+GGG + chr7_3:31712935-31712954 Msa1101160:CDS 30.0%
AAAAAGCTTCACAAAATCAG+TGG + chr7_3:31718347-31718366 Msa1101160:CDS 30.0%
AAAAGCTTCACAAAATCAGT+GGG + chr7_3:31718348-31718367 Msa1101160:CDS 30.0%
AGCACAAGCTTCTTAATATA+TGG - chr7_3:31713079-31713098 None:intergenic 30.0%
TAAATCCAGGTAAAATGCAA+GGG - chr7_3:31713330-31713349 None:intergenic 30.0%
TTAAATCCAGGTAAAATGCA+AGG - chr7_3:31713331-31713350 None:intergenic 30.0%
! TGCATTTTACCTGGATTTAA+TGG + chr7_3:31713331-31713350 Msa1101160:CDS 30.0%
TTTAGTGTACACCCATATAT+GGG + chr7_3:31713542-31713561 Msa1101160:intron 30.0%
CTTTCTCAACGAAAGATATA+CGG - chr7_3:31719001-31719020 None:intergenic 30.0%
TTCTTTGCAATCATCAAAGT+TGG - chr7_3:31714244-31714263 None:intergenic 30.0%
AAAATCTACTGGATGAAGTA+TGG - chr7_3:31719807-31719826 None:intergenic 30.0%
GCTTCAATTTCAAAATCTAC+TGG - chr7_3:31719818-31719837 None:intergenic 30.0%
TATCATAAGTACGACTCAAA+TGG + chr7_3:31720022-31720041 Msa1101160:intron 30.0%
!!! CCATGTAGAAATTGGTTTTT+TGG - chr7_3:31720162-31720181 None:intergenic 30.0%
CCAAAAAACCAATTTCTACA+TGG + chr7_3:31720159-31720178 Msa1101160:intron 30.0%
AGTATGATCCATGTAGAAAT+TGG - chr7_3:31720170-31720189 None:intergenic 30.0%
ATTGTCTTGTATTTGTTTGC+AGG + chr7_3:31720230-31720249 Msa1101160:intron 30.0%
TCAATATCAGAATTCTGTTG+TGG + chr7_3:31714873-31714892 Msa1101160:CDS 30.0%
!!! GTTTTTTCCAAGATATTGGG+AGG - chr7_3:31708773-31708792 None:intergenic 35.0%
TATGACAACATACGAGGTTA+GGG - chr7_3:31708833-31708852 None:intergenic 35.0%
ATATGACAACATACGAGGTT+AGG - chr7_3:31708834-31708853 None:intergenic 35.0%
TCTGATCAAAATGGTAGACA+TGG - chr7_3:31708885-31708904 None:intergenic 35.0%
!!! AGTGATTTTGCTGCTTTTTC+AGG - chr7_3:31709074-31709093 None:intergenic 35.0%
! TTACATCATGGGCTGTTATT+TGG + chr7_3:31709317-31709336 Msa1101160:intron 35.0%
TATTTCAGTGTCTTTGCCTT+TGG + chr7_3:31709429-31709448 Msa1101160:intron 35.0%
TTAGAGTTGTAAACCTCGTT+CGG - chr7_3:31709583-31709602 None:intergenic 35.0%
ACAACTCTAATCAACCACAT+TGG + chr7_3:31709593-31709612 Msa1101160:intron 35.0%
CAACTCTAATCAACCACATT+GGG + chr7_3:31709594-31709613 Msa1101160:intron 35.0%
AACTCTAATCAACCACATTG+GGG + chr7_3:31709595-31709614 Msa1101160:intron 35.0%
! GTATTTGCGTTTGACACTTT+TGG + chr7_3:31709749-31709768 Msa1101160:intron 35.0%
AACTTCTTCACGTGTCTTAA+TGG - chr7_3:31709998-31710017 None:intergenic 35.0%
AGACACGTGAAGAAGTTAAA+AGG + chr7_3:31710001-31710020 Msa1101160:intron 35.0%
!!! TCTCTCTGGAATGACTTTTT+TGG + chr7_3:31710382-31710401 Msa1101160:intron 35.0%
TATTGTTAAGACTCCCACAT+CGG - chr7_3:31710811-31710830 None:intergenic 35.0%
AAAAAAAAAGTGACGCTACG+GGG + chr7_3:31710854-31710873 Msa1101160:intron 35.0%
TTGCTTACAAAACTCATTCG+TGG + chr7_3:31710887-31710906 Msa1101160:intron 35.0%
! TCATTCGTGGCATTGAATTT+GGG + chr7_3:31710900-31710919 Msa1101160:intron 35.0%
! GCATAAGTTTTTCCGAAAAG+GGG - chr7_3:31711000-31711019 None:intergenic 35.0%
! GGCATAAGTTTTTCCGAAAA+GGG - chr7_3:31711001-31711020 None:intergenic 35.0%
GTCAATAAACATAGTCGTGT+TGG + chr7_3:31710974-31710993 Msa1101160:intron 35.0%
TTGTTTAAGGAACCCACAAA+AGG - chr7_3:31711365-31711384 None:intergenic 35.0%
GTTCCTTAAACAATGCCTTT+AGG + chr7_3:31711372-31711391 Msa1101160:intron 35.0%
TTATAGTATAGCTAGGGCTA+GGG - chr7_3:31711452-31711471 None:intergenic 35.0%
TTTATAGTATAGCTAGGGCT+AGG - chr7_3:31711453-31711472 None:intergenic 35.0%
TGCTGAAAAGATATTGCAAG+CGG + chr7_3:31711616-31711635 Msa1101160:CDS 35.0%
ATTATAGATGGAACCCAAGA+AGG + chr7_3:31711798-31711817 Msa1101160:CDS 35.0%
CCACATATAAGAACCTTCTT+GGG - chr7_3:31711814-31711833 None:intergenic 35.0%
CCAAGAAGGTTCTTATATGT+GGG + chr7_3:31711812-31711831 Msa1101160:CDS 35.0%
TACCTTAAAGAGGGATAACT+CGG - chr7_3:31712038-31712057 None:intergenic 35.0%
! AAGGTAGGAGTCCTAATTTT+AGG + chr7_3:31712052-31712071 Msa1101160:intron 35.0%
AGTATCGTAAATTAGTGGCT+TGG - chr7_3:31712253-31712272 None:intergenic 35.0%
! GAGCAAGTATCGTAAATTAG+TGG - chr7_3:31712258-31712277 None:intergenic 35.0%
TTTGATCGAAAGTTACAACC+TGG + chr7_3:31712320-31712339 Msa1101160:intron 35.0%
TTTACACCTAAAAAAACGCC+CGG + chr7_3:31712349-31712368 Msa1101160:intron 35.0%
GGTGTCTAATATCAATTGTG+TGG + chr7_3:31712532-31712551 Msa1101160:intron 35.0%
ATCTGAGAACAATAGCAATG+TGG - chr7_3:31712666-31712685 None:intergenic 35.0%
GGTGACAGTTAACTATGTAT+TGG + chr7_3:31712925-31712944 Msa1101160:intron 35.0%
TATTAAGAAGCTTGTGCTCA+AGG + chr7_3:31713081-31713100 Msa1101160:CDS 35.0%
ATTAAGAAGCTTGTGCTCAA+GGG + chr7_3:31713082-31713101 Msa1101160:CDS 35.0%
! TCTTGTAGTTACTTGCGTTT+TGG + chr7_3:31713253-31713272 Msa1101160:intron 35.0%
!!! CAGGTTTTGAATGCAACTAA+TGG + chr7_3:31713295-31713314 Msa1101160:CDS 35.0%
TGTTATCGAAAATAAGAGGC+AGG - chr7_3:31713410-31713429 None:intergenic 35.0%
ATCTACATATATGGAACGAG+AGG - chr7_3:31713448-31713467 None:intergenic 35.0%
TTTACCTCTTTCTCTCTCAA+GGG - chr7_3:31713575-31713594 None:intergenic 35.0%
! TTTTACCTCTTTCTCTCTCA+AGG - chr7_3:31713576-31713595 None:intergenic 35.0%
!! TTTGTTATTGGCATGCTTGA+TGG - chr7_3:31714137-31714156 None:intergenic 35.0%
AAAGGGACCTTTACATATTC+AGG + chr7_3:31714183-31714202 Msa1101160:intron 35.0%
ATATTCAGGAGTGGAGTATA+AGG + chr7_3:31714197-31714216 Msa1101160:CDS 35.0%
! ACTTTTGGTGGAATATGGAA+TGG + chr7_3:31714315-31714334 Msa1101160:CDS 35.0%
! AGTATTTTACATCTTCAGCC+AGG - chr7_3:31714392-31714411 None:intergenic 35.0%
GCTTCAATTTCGAAATCTAC+TGG - chr7_3:31714551-31714570 None:intergenic 35.0%
AGCTTGTGCATTAAACTTTG+AGG + chr7_3:31714577-31714596 Msa1101160:CDS 35.0%
AAAACGTCCATATGTATGCA+TGG + chr7_3:31714634-31714653 Msa1101160:CDS 35.0%
AAGAGATCCATGCATACATA+TGG - chr7_3:31714644-31714663 None:intergenic 35.0%
! TCTTAACTCTATTTGTTGGC+AGG + chr7_3:31714811-31714830 Msa1101160:intron 35.0%
TCCTCAACAAGAAATTACAG+TGG + chr7_3:31714840-31714859 Msa1101160:CDS 35.0%
CCTCAACAAGAAATTACAGT+GGG + chr7_3:31714841-31714860 Msa1101160:CDS 35.0%
CTCAACAAGAAATTACAGTG+GGG + chr7_3:31714842-31714861 Msa1101160:CDS 35.0%
TCAGTATAAGCATGGAAGAA+AGG - chr7_3:31715078-31715097 None:intergenic 35.0%
ACGAACTCATCATAAGAACA+TGG - chr7_3:31715127-31715146 None:intergenic 35.0%
TCTACTAAATGTATCACGGT+AGG - chr7_3:31715227-31715246 None:intergenic 35.0%
CCGTTAGATCTTTGCTTAAA+TGG + chr7_3:31715313-31715332 Msa1101160:intron 35.0%
TGCTTAAATGGAAAACATGG+TGG + chr7_3:31715325-31715344 Msa1101160:intron 35.0%
GCTTAAATGGAAAACATGGT+GGG + chr7_3:31715326-31715345 Msa1101160:intron 35.0%
! CTTTTTCCGGTTATACATAG+TGG + chr7_3:31715476-31715495 Msa1101160:intron 35.0%
CACAATCCACTATGTATAAC+CGG - chr7_3:31715485-31715504 None:intergenic 35.0%
!! ACATAGTGGATTGTGAATCA+TGG + chr7_3:31715490-31715509 Msa1101160:intron 35.0%
! AAGTGGTGATGAGTGTAATT+AGG - chr7_3:31715543-31715562 None:intergenic 35.0%
ATCAAATATGACAGCGTAAG+AGG - chr7_3:31715662-31715681 None:intergenic 35.0%
CGGGAATGAATTATTTCCAT+TGG + chr7_3:31716122-31716141 Msa1101160:intron 35.0%
TCTATGATAAGTGAGTGTCT+TGG - chr7_3:31716208-31716227 None:intergenic 35.0%
! GAGCATATGGTTGATACATT+TGG - chr7_3:31716372-31716391 None:intergenic 35.0%
TAGCGATGAAAATGAGCATA+TGG - chr7_3:31716385-31716404 None:intergenic 35.0%
! GCTCATTTTCATCGCTATAT+AGG + chr7_3:31716388-31716407 Msa1101160:intron 35.0%
TCATATACGTAAAGTCCGTT+TGG + chr7_3:31716679-31716698 Msa1101160:intron 35.0%
! CTCTTAACGTCTTAAGCTTT+TGG + chr7_3:31716920-31716939 Msa1101160:intron 35.0%
GGTGACTTTGTAACATACTT+TGG - chr7_3:31717064-31717083 None:intergenic 35.0%
!! TCACTTTTGGCTATCATGAT+TGG - chr7_3:31717175-31717194 None:intergenic 35.0%
TAATTCCTTCTTGTGGTTGA+AGG - chr7_3:31717213-31717232 None:intergenic 35.0%
TCTGGGTTATTTGGAAGTAA+AGG - chr7_3:31717298-31717317 None:intergenic 35.0%
! ACTAGCCTCTATTAATTTGG+CGG - chr7_3:31717374-31717393 None:intergenic 35.0%
! CACACTAGCCTCTATTAATT+TGG - chr7_3:31717377-31717396 None:intergenic 35.0%
AATGTGTCAAGATCGATATG+TGG + chr7_3:31717399-31717418 Msa1101160:intron 35.0%
TAGGGTGAAAAGAGAAAGTT+AGG + chr7_3:31717441-31717460 Msa1101160:intron 35.0%
TGCTGAAAAGATATTGCAAG+CGG + chr7_3:31711616-31711635 Msa1101160:CDS 35.0%
AGGCATTTGAAAGCCAATTA+AGG - chr7_3:31718004-31718023 None:intergenic 35.0%
CTGAACATATTCCTTGTCTA+AGG - chr7_3:31718045-31718064 None:intergenic 35.0%
ATTATTGATGGAACCCAAGA+AGG + chr7_3:31718105-31718124 Msa1101160:CDS 35.0%
CCACATATAAGAACCTTCTT+GGG - chr7_3:31711814-31711833 None:intergenic 35.0%
CCAAGAAGGTTCTTATATGT+GGG + chr7_3:31711812-31711831 Msa1101160:CDS 35.0%
CTTATAATGAATATTGGGGG+AGG - chr7_3:31718272-31718291 None:intergenic 35.0%
GGTGACAGTTAACTATGTAT+TGG + chr7_3:31712925-31712944 Msa1101160:intron 35.0%
TATTAAGAAGCTTGTGCTCA+AGG + chr7_3:31713081-31713100 Msa1101160:CDS 35.0%
ATTAAGAAGCTTGTGCTCAA+GGG + chr7_3:31713082-31713101 Msa1101160:CDS 35.0%
!!! CAGGTTTTGAATGCAACTAA+TGG + chr7_3:31713295-31713314 Msa1101160:CDS 35.0%
GTTTAGTGTACACCCATATA+TGG + chr7_3:31713541-31713560 Msa1101160:intron 35.0%
AGGTGTAAACACCCATATAT+GGG - chr7_3:31718845-31718864 None:intergenic 35.0%
AAGGTGTAAACACCCATATA+TGG - chr7_3:31718846-31718865 None:intergenic 35.0%
TGATGTGTTGAACAAGTGTA+AGG + chr7_3:31718949-31718968 Msa1101160:intron 35.0%
GATGTGTTGAACAAGTGTAA+GGG + chr7_3:31718950-31718969 Msa1101160:intron 35.0%
!! TTTGTTATTGGCATGCTTGA+TGG - chr7_3:31714137-31714156 None:intergenic 35.0%
AAAGGGACCTTTACATATTC+AGG + chr7_3:31714183-31714202 Msa1101160:intron 35.0%
ATATTCAGGAGTGGAGTATA+AGG + chr7_3:31714197-31714216 Msa1101160:CDS 35.0%
! ACTTTTGGTGGAATATGGAA+TGG + chr7_3:31714315-31714334 Msa1101160:CDS 35.0%
! AGTATTTTACATCTTCAGCC+AGG - chr7_3:31714392-31714411 None:intergenic 35.0%
ACTGGATGAAGTATGGAATT+AGG - chr7_3:31719800-31719819 None:intergenic 35.0%
AGCTTGTGCATTAAACTTTG+AGG + chr7_3:31714577-31714596 Msa1101160:CDS 35.0%
AAAACGTCCATATGTATGCA+TGG + chr7_3:31714634-31714653 Msa1101160:CDS 35.0%
AAGAGATCCATGCATACATA+TGG - chr7_3:31714644-31714663 None:intergenic 35.0%
CAACACTGAGACATAATACT+AGG - chr7_3:31720121-31720140 None:intergenic 35.0%
TTGTATTTGTTTGCAGGCTT+AGG + chr7_3:31720236-31720255 Msa1101160:intron 35.0%
AAAAGAGATTACAGTAGGTG+AGG + chr7_3:31720265-31720284 Msa1101160:CDS 35.0%
AAAGAGATTACAGTAGGTGA+GGG + chr7_3:31720266-31720285 Msa1101160:CDS 35.0%
AAACTTAGGTAACGCTGATA+TGG - chr7_3:31720351-31720370 None:intergenic 35.0%
AAACTAGCTACTAGTGGTAG+AGG - chr7_3:31708643-31708662 None:intergenic 40.0%
GAAATGTGATGAGTGTGGTT+AGG - chr7_3:31708723-31708742 None:intergenic 40.0%
GAGTAGAAATGTGATGAGTG+TGG - chr7_3:31708728-31708747 None:intergenic 40.0%
!!! AGGTTAGGGCTTCTTGTTTT+GGG - chr7_3:31708819-31708838 None:intergenic 40.0%
ATATTTGATGCTGGTAGCAC+TGG + chr7_3:31708850-31708869 Msa1101160:CDS 40.0%
AAAATGGTAGACATGGACAC+GGG - chr7_3:31708878-31708897 None:intergenic 40.0%
CAAAATGGTAGACATGGACA+CGG - chr7_3:31708879-31708898 None:intergenic 40.0%
!!! TTTTGGAGTGCAGATCTTCA+GGG - chr7_3:31709130-31709149 None:intergenic 40.0%
AAAAACACCAAGGACACCAA+AGG - chr7_3:31709448-31709467 None:intergenic 40.0%
TAGAGTTGTAAACCTCGTTC+GGG - chr7_3:31709582-31709601 None:intergenic 40.0%
TGATTGAATAGTCCCCAATG+TGG - chr7_3:31709610-31709629 None:intergenic 40.0%
! CTTGACATTTTCCTAATGGC+TGG - chr7_3:31709882-31709901 None:intergenic 40.0%
TAGCTCTTAGAAATCGTGGT+TGG + chr7_3:31710705-31710724 Msa1101160:intron 40.0%
AGCTCTTAGAAATCGTGGTT+GGG + chr7_3:31710706-31710725 Msa1101160:intron 40.0%
!!! ATCTCACAAGCTGGTTTTGT+GGG - chr7_3:31710743-31710762 None:intergenic 40.0%
! CTCATTCGTGGCATTGAATT+TGG + chr7_3:31710899-31710918 Msa1101160:intron 40.0%
CAAACACAACAGAGATTTCG+AGG - chr7_3:31710936-31710955 None:intergenic 40.0%
! GGGCATAAGTTTTTCCGAAA+AGG - chr7_3:31711002-31711021 None:intergenic 40.0%
TTATGCCCTTGTAACGTTGT+GGG + chr7_3:31711014-31711033 Msa1101160:intron 40.0%
!!! GGCACAAGTTTTTTCGAGAA+GGG - chr7_3:31711094-31711113 None:intergenic 40.0%
!!! AGGCACAAGTTTTTTCGAGA+AGG - chr7_3:31711095-31711114 None:intergenic 40.0%
GTCAATAAACATAGCCGTGT+TGG + chr7_3:31711160-31711179 Msa1101160:intron 40.0%
! GTGAGTTCATTTTCCGAGAA+GGG - chr7_3:31711187-31711206 None:intergenic 40.0%
! AGTGAGTTCATTTTCCGAGA+AGG - chr7_3:31711188-31711207 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+AGG + chr7_3:31711242-31711261 Msa1101160:intron 40.0%
!! TGCCCTAAAGGCATTGTTTA+AGG - chr7_3:31711378-31711397 None:intergenic 40.0%
TATAGTATAGCTAGGGCTAG+GGG - chr7_3:31711451-31711470 None:intergenic 40.0%
! GCTTGCAATATCTTTTCAGC+AGG - chr7_3:31711617-31711636 None:intergenic 40.0%
CCCAAGAAGGTTCTTATATG+TGG + chr7_3:31711811-31711830 Msa1101160:CDS 40.0%
CCCACATATAAGAACCTTCT+TGG - chr7_3:31711815-31711834 None:intergenic 40.0%
TTAAGTATAAGTGGCCCATC+TGG + chr7_3:31712011-31712030 Msa1101160:intron 40.0%
ACCTTAAAGAGGGATAACTC+GGG - chr7_3:31712037-31712056 None:intergenic 40.0%
!! GAGTTATCCCTCTTTAAGGT+AGG + chr7_3:31712037-31712056 Msa1101160:intron 40.0%
TAGGACTCCTACCTTAAAGA+GGG - chr7_3:31712047-31712066 None:intergenic 40.0%
TTAGGACTCCTACCTTAAAG+AGG - chr7_3:31712048-31712067 None:intergenic 40.0%
TTTAGGTGTAAACTCTGACC+AGG - chr7_3:31712341-31712360 None:intergenic 40.0%
TTACACCTAAAAAAACGCCC+GGG + chr7_3:31712350-31712369 Msa1101160:intron 40.0%
CTCTAATTGCTCAATCGATC+GGG - chr7_3:31712384-31712403 None:intergenic 40.0%
CCTCTAATTGCTCAATCGAT+CGG - chr7_3:31712385-31712404 None:intergenic 40.0%
CGATCGATTGAGCAATTAGA+GGG + chr7_3:31712383-31712402 Msa1101160:intron 40.0%
!! ACCAAACGGACTAGCAAATT+TGG - chr7_3:31712467-31712486 None:intergenic 40.0%
CATTCTAGACATGATGGTAG+TGG + chr7_3:31712813-31712832 Msa1101160:intron 40.0%
ACAATGGGAGTAATTGACCT+TGG + chr7_3:31712974-31712993 Msa1101160:CDS 40.0%
AATGCTCCTAAAGTTGCTGA+TGG + chr7_3:31713046-31713065 Msa1101160:CDS 40.0%
AGGGGTAAACACCCATATAT+GGG - chr7_3:31713556-31713575 None:intergenic 40.0%
AAGGGGTAAACACCCATATA+TGG - chr7_3:31713557-31713576 None:intergenic 40.0%
TTACCTCTTTCTCTCTCAAG+GGG - chr7_3:31713574-31713593 None:intergenic 40.0%
GACCTTTACATATTCAGGAG+TGG + chr7_3:31714188-31714207 Msa1101160:CDS 40.0%
CTCCACTCCTGAATATGTAA+AGG - chr7_3:31714193-31714212 None:intergenic 40.0%
! ATTCCACCAAAAGTGCAACT+CGG - chr7_3:31714309-31714328 None:intergenic 40.0%
! GTTGCACTTTTGGTGGAATA+TGG + chr7_3:31714310-31714329 Msa1101160:CDS 40.0%
TTTGGTGGAATATGGAATGG+TGG + chr7_3:31714318-31714337 Msa1101160:CDS 40.0%
ACTGGATGAAGCATGGAATT+AGG - chr7_3:31714533-31714552 None:intergenic 40.0%
GAAATCTACTGGATGAAGCA+TGG - chr7_3:31714540-31714559 None:intergenic 40.0%
ATCCACTTATCCTCGTCTTA+CGG + chr7_3:31714607-31714626 Msa1101160:CDS 40.0%
CATGAACAAGCAACACATGT+TGG - chr7_3:31714670-31714689 None:intergenic 40.0%
!! CAACATGTGTTGCTTGTTCA+TGG + chr7_3:31714668-31714687 Msa1101160:CDS 40.0%
!! GTGTTGCTTGTTCATGGATT+TGG + chr7_3:31714674-31714693 Msa1101160:CDS 40.0%
! TGCTTGTTCATGGATTTGGT+AGG + chr7_3:31714678-31714697 Msa1101160:intron 40.0%
CCCACTGTAATTTCTTGTTG+AGG - chr7_3:31714844-31714863 None:intergenic 40.0%
CCACAAGATCAGTATAAGCA+TGG - chr7_3:31715086-31715105 None:intergenic 40.0%
CCATGCTTATACTGATCTTG+TGG + chr7_3:31715083-31715102 Msa1101160:intron 40.0%
ACTCATCATAAGAACATGGC+TGG - chr7_3:31715123-31715142 None:intergenic 40.0%
TATTGTGAGGTAGTGATTGC+AGG - chr7_3:31715583-31715602 None:intergenic 40.0%
TATGACAGCGTAAGAGGTTA+AGG - chr7_3:31715656-31715675 None:intergenic 40.0%
TACGCTGTCATATTTGATGC+TGG + chr7_3:31715664-31715683 Msa1101160:CDS 40.0%
ATATTTGATGCTGGTAGCAC+TGG + chr7_3:31708850-31708869 Msa1101160:CDS 40.0%
GTTGTGATGTAGATCAAACC+AGG + chr7_3:31715892-31715911 Msa1101160:intron 40.0%
!! AGAGATTTTGCTGCTTGTTC+AGG - chr7_3:31715940-31715959 None:intergenic 40.0%
!! ATCTCTCATTCCACTTTTGG+AGG + chr7_3:31715954-31715973 Msa1101160:CDS 40.0%
GTAAGTCAAGTCTATGTGAC+TGG + chr7_3:31716239-31716258 Msa1101160:intron 40.0%
!! CTTTTGGCTATCATGATTGG+TGG - chr7_3:31717172-31717191 None:intergenic 40.0%
CTTGTGGTTGAAGGCTAATT+TGG - chr7_3:31717204-31717223 None:intergenic 40.0%
!! ATTAGCCTTCAACCACAAGA+AGG + chr7_3:31717205-31717224 Msa1101160:intron 40.0%
CATACCCGCCAAATTAATAG+AGG + chr7_3:31717366-31717385 Msa1101160:intron 40.0%
! CTAGCCTCTATTAATTTGGC+GGG - chr7_3:31717373-31717392 None:intergenic 40.0%
GTGCAAGGCTGATATTTGTA+CGG + chr7_3:31717546-31717565 Msa1101160:intron 40.0%
ATTCAAAAGCCTCAAACCTG+CGG - chr7_3:31717893-31717912 None:intergenic 40.0%
!! CAGGTTTGAGGCTTTTGAAT+GGG + chr7_3:31717893-31717912 Msa1101160:CDS 40.0%
!! AGGTTTGAGGCTTTTGAATG+GGG + chr7_3:31717894-31717913 Msa1101160:CDS 40.0%
CCCAAGAAGGTTCTTATATG+TGG + chr7_3:31711811-31711830 Msa1101160:CDS 40.0%
CCCACATATAAGAACCTTCT+TGG - chr7_3:31711815-31711834 None:intergenic 40.0%
AATGCTCCAAAAGTTGCAGA+TGG + chr7_3:31718435-31718454 Msa1101160:CDS 40.0%
TCTTGTAGTTACTTGCGCTT+TGG + chr7_3:31718639-31718658 Msa1101160:intron 40.0%
TACCTCTTTCTGATCTCTCA+AGG - chr7_3:31718865-31718884 None:intergenic 40.0%
GACCTTTACATATTCAGGAG+TGG + chr7_3:31714188-31714207 Msa1101160:CDS 40.0%
CTCCACTCCTGAATATGTAA+AGG - chr7_3:31714193-31714212 None:intergenic 40.0%
! ATTCCACCAAAAGTGCAACT+CGG - chr7_3:31714309-31714328 None:intergenic 40.0%
! GTTGCACTTTTGGTGGAATA+TGG + chr7_3:31714310-31714329 Msa1101160:CDS 40.0%
TTTGGTGGAATATGGAATGG+TGG + chr7_3:31714318-31714337 Msa1101160:CDS 40.0%
! TTTGGTTTCAAATAGCCCGA+CGG - chr7_3:31720144-31720163 None:intergenic 40.0%
! CCTACTGTAATCTCTTTTCG+TGG - chr7_3:31720263-31720282 None:intergenic 40.0%
CCACGAAAAGAGATTACAGT+AGG + chr7_3:31720260-31720279 Msa1101160:CDS 40.0%
CTCTCTTCCTCCCAATATCT+TGG + chr7_3:31708763-31708782 Msa1101160:CDS 45.0%
!! GAGGTTAGGGCTTCTTGTTT+TGG - chr7_3:31708820-31708839 None:intergenic 45.0%
! CTCTCTGCTTCTTCTAGAAG+TGG - chr7_3:31709101-31709120 None:intergenic 45.0%
!!! GTTTTGGAGTGCAGATCTTC+AGG - chr7_3:31709131-31709150 None:intergenic 45.0%
AAAACTCACCCCAAGCCTAA+GGG - chr7_3:31709156-31709175 None:intergenic 45.0%
AAAAACTCACCCCAAGCCTA+AGG - chr7_3:31709157-31709176 None:intergenic 45.0%
! GTTTTATGAGCACTCACGAG+AGG + chr7_3:31709403-31709422 Msa1101160:intron 45.0%
CCTCGTTCGGGGAAATATTT+GGG - chr7_3:31709570-31709589 None:intergenic 45.0%
ACCTCGTTCGGGGAAATATT+TGG - chr7_3:31709571-31709590 None:intergenic 45.0%
AGAGTTGTAAACCTCGTTCG+GGG - chr7_3:31709581-31709600 None:intergenic 45.0%
ATAAAAAGGGGCCAGCCATT+AGG + chr7_3:31709868-31709887 Msa1101160:intron 45.0%
TCTTCACGTGTCTTAATGGC+TGG - chr7_3:31709994-31710013 None:intergenic 45.0%
!!! TCTCACAAGCTGGTTTTGTG+GGG - chr7_3:31710742-31710761 None:intergenic 45.0%
!!! CATCTCACAAGCTGGTTTTG+TGG - chr7_3:31710744-31710763 None:intergenic 45.0%
CAAAACCAGCTTGTGAGATG+AGG + chr7_3:31710744-31710763 Msa1101160:intron 45.0%
TTAAGACTCCCACATCGGAT+AGG - chr7_3:31710806-31710825 None:intergenic 45.0%
!! TTTGAGTTGAGTTGCAGTGC+AGG + chr7_3:31710952-31710971 Msa1101160:intron 45.0%
! TAGTCGTGTTGTCCCCTTTT+CGG + chr7_3:31710985-31711004 Msa1101160:intron 45.0%
CTTATGCCCTTGTAACGTTG+TGG + chr7_3:31711013-31711032 Msa1101160:intron 45.0%
TATGCCCTTGTAACGTTGTG+GGG + chr7_3:31711015-31711034 Msa1101160:intron 45.0%
CATTTGCTTACTTGCAGTGC+AGG + chr7_3:31711045-31711064 Msa1101160:intron 45.0%
CATTTGCTTACTTGCAGTGC+AGG + chr7_3:31711045-31711064 Msa1101160:intron 45.0%
CTTGCTAACAAGTGCCCTAA+AGG - chr7_3:31711390-31711409 None:intergenic 45.0%
AATATTGATGCAGGCAACCG+CGG + chr7_3:31711568-31711587 Msa1101160:intron 45.0%
ATCCAAAAGCCTTAAACCCG+CGG - chr7_3:31711588-31711607 None:intergenic 45.0%
!! CGGGTTTAAGGCTTTTGGAT+GGG + chr7_3:31711588-31711607 Msa1101160:CDS 45.0%
!! GGGTTTAAGGCTTTTGGATG+GGG + chr7_3:31711589-31711608 Msa1101160:CDS 45.0%
!!! TAAGTCCCGGGCGTTTTTTT+AGG - chr7_3:31712358-31712377 None:intergenic 45.0%
CCGATCGATTGAGCAATTAG+AGG + chr7_3:31712382-31712401 Msa1101160:intron 45.0%
AGCTCATAGCAGAGGATACA+TGG + chr7_3:31712440-31712459 Msa1101160:intron 45.0%
GCTCATAGCAGAGGATACAT+GGG + chr7_3:31712441-31712460 Msa1101160:intron 45.0%
!! GCCAAATTTGCTAGTCCGTT+TGG + chr7_3:31712463-31712482 Msa1101160:intron 45.0%
TAGTCCGAGAATAGCAACGT+GGG - chr7_3:31712862-31712881 None:intergenic 45.0%
ATAGTCCGAGAATAGCAACG+TGG - chr7_3:31712863-31712882 None:intergenic 45.0%
! CGTTGCTATTCTCGGACTAT+TGG + chr7_3:31712863-31712882 Msa1101160:intron 45.0%
ATGGGAGTAATTGACCTTGG+AGG + chr7_3:31712977-31712996 Msa1101160:CDS 45.0%
TTTGAACTGAACCACCTCCA+AGG - chr7_3:31712994-31713013 None:intergenic 45.0%
! GCTAACCCTTGCATTTTACC+TGG + chr7_3:31713322-31713341 Msa1101160:CDS 45.0%
TTACCCCTTGAGAGAGAAAG+AGG + chr7_3:31713568-31713587 Msa1101160:intron 45.0%
!! AAGGCTTTTTCCCCTTCTTC+TGG + chr7_3:31714216-31714235 Msa1101160:CDS 45.0%
AAAGTTGGAGCCAGAAGAAG+GGG - chr7_3:31714229-31714248 None:intergenic 45.0%
CAAAGTTGGAGCCAGAAGAA+GGG - chr7_3:31714230-31714249 None:intergenic 45.0%
TCAAAGTTGGAGCCAGAAGA+AGG - chr7_3:31714231-31714250 None:intergenic 45.0%
! CCAAAAGTGCAACTCGGATA+GGG - chr7_3:31714303-31714322 None:intergenic 45.0%
! ACCAAAAGTGCAACTCGGAT+AGG - chr7_3:31714304-31714323 None:intergenic 45.0%
! TATCCGAGTTGCACTTTTGG+TGG + chr7_3:31714303-31714322 Msa1101160:CDS 45.0%
! GAATATGGAATGGTGGAGGA+GGG + chr7_3:31714325-31714344 Msa1101160:CDS 45.0%
TACTTCAGCTTTCGCTTACC+TGG + chr7_3:31714371-31714390 Msa1101160:CDS 45.0%
ACAAGAAATTACAGTGGGGC+AGG + chr7_3:31714846-31714865 Msa1101160:CDS 45.0%
CAAGAAATTACAGTGGGGCA+GGG + chr7_3:31714847-31714866 Msa1101160:CDS 45.0%
ATTCTGTTGTGGAAGCTGCA+TGG + chr7_3:31714884-31714903 Msa1101160:CDS 45.0%
AAACCAGGTTTGAGTGCGTA+TGG + chr7_3:31715907-31715926 Msa1101160:CDS 45.0%
AACCAGGTTTGAGTGCGTAT+GGG + chr7_3:31715908-31715927 Msa1101160:CDS 45.0%
TCTTCTGCTTCCTCCAAAAG+TGG - chr7_3:31715967-31715986 None:intergenic 45.0%
TTTGGAGGAAGCAGAAGATG+TGG + chr7_3:31715969-31715988 Msa1101160:CDS 45.0%
AAAACTCACCCCAAGCCTAA+GGG - chr7_3:31709156-31709175 None:intergenic 45.0%
AGAGTGATTCAATCCGCACA+AGG + chr7_3:31717018-31717037 Msa1101160:intron 45.0%
! TCTTTTATGCACGCCTTGTG+CGG - chr7_3:31717034-31717053 None:intergenic 45.0%
TTTGACTATGGCGTGTGTCT+GGG - chr7_3:31717315-31717334 None:intergenic 45.0%
ATTTGACTATGGCGTGTGTC+TGG - chr7_3:31717316-31717335 None:intergenic 45.0%
ATAATAATGCAGGCAACCGC+AGG + chr7_3:31717874-31717893 Msa1101160:intron 45.0%
!! GCAGGTTTGAGGCTTTTGAA+TGG + chr7_3:31717892-31717911 Msa1101160:CDS 45.0%
TGCATCACGTTGAACGTTGA+GGG - chr7_3:31718079-31718098 None:intergenic 45.0%
TCAGTGGGAGTAATTGACCT+TGG + chr7_3:31718363-31718382 Msa1101160:CDS 45.0%
TTTGAACTGAACCACCTCCA+AGG - chr7_3:31712994-31713013 None:intergenic 45.0%
TCCAAAAGTTGCAGATGGAG+AGG + chr7_3:31718440-31718459 Msa1101160:CDS 45.0%
! TCCTCTCCATCTGCAACTTT+TGG - chr7_3:31718444-31718463 None:intergenic 45.0%
! GCTAACCCTTGCATTTTACC+TGG + chr7_3:31713322-31713341 Msa1101160:CDS 45.0%
CACCTTGAGAGATCAGAAAG+AGG + chr7_3:31718860-31718879 Msa1101160:intron 45.0%
!! AAGGCTTTTTCCCCTTCTTC+TGG + chr7_3:31714216-31714235 Msa1101160:CDS 45.0%
AAAGTTGGAGCCAGAAGAAG+GGG - chr7_3:31714229-31714248 None:intergenic 45.0%
CAAAGTTGGAGCCAGAAGAA+GGG - chr7_3:31714230-31714249 None:intergenic 45.0%
TCAAAGTTGGAGCCAGAAGA+AGG - chr7_3:31714231-31714250 None:intergenic 45.0%
! CCAAAAGTGCAACTCGGATA+GGG - chr7_3:31714303-31714322 None:intergenic 45.0%
! ACCAAAAGTGCAACTCGGAT+AGG - chr7_3:31714304-31714323 None:intergenic 45.0%
! TATCCGAGTTGCACTTTTGG+TGG + chr7_3:31714303-31714322 Msa1101160:CDS 45.0%
! GAATATGGAATGGTGGAGGA+GGG + chr7_3:31714325-31714344 Msa1101160:CDS 45.0%
TACTTCAGCTTTCGCTTACC+TGG + chr7_3:31714371-31714390 Msa1101160:CDS 45.0%
CTCTGTAAGACGTGGATAAG+TGG - chr7_3:31719879-31719898 None:intergenic 45.0%
CACTTATCCACGTCTTACAG+AGG + chr7_3:31719877-31719896 Msa1101160:CDS 45.0%
! CAACATGTGTTGCTCGTTCA+TGG + chr7_3:31719935-31719954 Msa1101160:intron 45.0%
! GTGTTGCTCGTTCATGGATT+TGG + chr7_3:31719941-31719960 Msa1101160:intron 45.0%
! TGCTCGTTCATGGATTTGGT+AGG + chr7_3:31719945-31719964 Msa1101160:intron 45.0%
CGCAGATAGAGTAGTAGTAC+AGG - chr7_3:31720098-31720117 None:intergenic 45.0%
TTATGTCTCAGTGTTGCCGT+CGG + chr7_3:31720125-31720144 Msa1101160:intron 45.0%
ATTCTGTTGTGGAAGCTGCA+TGG + chr7_3:31714884-31714903 Msa1101160:CDS 45.0%
!!! TTTTTATTTATTTTTTTAAG+AGG - chr7_3:31709800-31709819 None:intergenic 5.0%
!! TATATATATATATATAAACA+AGG - chr7_3:31711415-31711434 None:intergenic 5.0%
!!! GTTTAATTTTTTTTTTTTTT+AGG + chr7_3:31714484-31714503 Msa1101160:intron 5.0%
!! TAAATTAAATTAAATAAAAG+TGG + chr7_3:31715038-31715057 Msa1101160:intron 5.0%
!! ATAAAATTAAAATTTCTTTA+TGG + chr7_3:31718154-31718173 Msa1101160:intron 5.0%
!!! TATAATGTTAATTTTTTTTT+TGG + chr7_3:31718205-31718224 Msa1101160:intron 5.0%
!!! AATTGTTTAATTTTTTTTTT+AGG + chr7_3:31719751-31719770 Msa1101160:intron 5.0%
TATTGGGAGGAAGAGAGAGC+AGG - chr7_3:31708760-31708779 None:intergenic 50.0%
ACCAGGTTTGAGTGCATACG+CGG + chr7_3:31709043-31709062 Msa1101160:CDS 50.0%
TGCACTCCAAAACACCCCTT+AGG + chr7_3:31709138-31709157 Msa1101160:CDS 50.0%
TCCAAAACACCCCTTAGGCT+TGG + chr7_3:31709143-31709162 Msa1101160:CDS 50.0%
CCAAAACACCCCTTAGGCTT+GGG + chr7_3:31709144-31709163 Msa1101160:CDS 50.0%
CAAAACACCCCTTAGGCTTG+GGG + chr7_3:31709145-31709164 Msa1101160:CDS 50.0%
AAACTCACCCCAAGCCTAAG+GGG - chr7_3:31709155-31709174 None:intergenic 50.0%
!! GTCTTTGCCTTTGGTGTCCT+TGG + chr7_3:31709438-31709457 Msa1101160:intron 50.0%
CCCAAATATTTCCCCGAACG+AGG + chr7_3:31709567-31709586 Msa1101160:intron 50.0%
GCAATCCTCATCTCACAAGC+TGG - chr7_3:31710752-31710771 None:intergenic 50.0%
AGGCTATCACCTATCCGATG+TGG + chr7_3:31710794-31710813 Msa1101160:intron 50.0%
GGCTATCACCTATCCGATGT+GGG + chr7_3:31710795-31710814 Msa1101160:intron 50.0%
GTCACCCCACAACGTTACAA+GGG - chr7_3:31711022-31711041 None:intergenic 50.0%
AGTCACCCCACAACGTTACA+AGG - chr7_3:31711023-31711042 None:intergenic 50.0%
CTTGTGCCTTTGTAACGCTG+CGG + chr7_3:31711106-31711125 Msa1101160:intron 50.0%
TTGTGCCTTTGTAACGCTGC+GGG + chr7_3:31711107-31711126 Msa1101160:intron 50.0%
TTTCCGAGAAGGGACCAACA+CGG - chr7_3:31711177-31711196 None:intergenic 50.0%
ATATTGATGCAGGCAACCGC+GGG + chr7_3:31711569-31711588 Msa1101160:intron 50.0%
!! AACCGCGGGTTTAAGGCTTT+TGG + chr7_3:31711583-31711602 Msa1101160:CDS 50.0%
!! GCGGGTTTAAGGCTTTTGGA+TGG + chr7_3:31711587-31711606 Msa1101160:CDS 50.0%
GCCCGAGTTATCCCTCTTTA+AGG + chr7_3:31712033-31712052 Msa1101160:intron 50.0%
TCGCTCATAGCTCATAGCAG+AGG + chr7_3:31712432-31712451 Msa1101160:intron 50.0%
GGTCATGAACGGACATCACT+AGG - chr7_3:31712586-31712605 None:intergenic 50.0%
! GAGTCCCACGTTGCTATTCT+CGG + chr7_3:31712855-31712874 Msa1101160:intron 50.0%
GGAGTAATTGACCTTGGAGG+TGG + chr7_3:31712980-31712999 Msa1101160:CDS 50.0%
! TCCTAAAGTTGCTGATGGCG+AGG + chr7_3:31713051-31713070 Msa1101160:CDS 50.0%
TCCTCGCCATCAGCAACTTT+AGG - chr7_3:31713055-31713074 None:intergenic 50.0%
CAAAGAAGCAACTCGAGCAC+AGG + chr7_3:31713276-31713295 Msa1101160:CDS 50.0%
! CCCTATCCGAGTTGCACTTT+TGG + chr7_3:31714300-31714319 Msa1101160:CDS 50.0%
GGTGGAATATGGAATGGTGG+AGG + chr7_3:31714321-31714340 Msa1101160:CDS 50.0%
! GGAATATGGAATGGTGGAGG+AGG + chr7_3:31714324-31714343 Msa1101160:CDS 50.0%
CTCCGTAAGACGAGGATAAG+TGG - chr7_3:31714612-31714631 None:intergenic 50.0%
CACTTATCCTCGTCTTACGG+AGG + chr7_3:31714610-31714629 Msa1101160:CDS 50.0%
ACCAGGTTTGAGTGCGTATG+GGG + chr7_3:31715909-31715928 Msa1101160:CDS 50.0%
AGCAGAAGATGTGGTTCCTG+AGG + chr7_3:31715978-31715997 Msa1101160:CDS 50.0%
!!! CAAGCCTAAGGGGTGTTTTG+GGG - chr7_3:31709145-31709164 None:intergenic 50.0%
!!! CCAAGCCTAAGGGGTGTTTT+GGG - chr7_3:31709146-31709165 None:intergenic 50.0%
CCAAAACACCCCTTAGGCTT+GGG + chr7_3:31709144-31709163 Msa1101160:CDS 50.0%
CAAAACACCCCTTAGGCTTG+GGG + chr7_3:31709145-31709164 Msa1101160:CDS 50.0%
AAACTCACCCCAAGCCTAAG+GGG - chr7_3:31709155-31709174 None:intergenic 50.0%
GAAAACTCACCCCAAGCCTA+AGG - chr7_3:31716023-31716042 None:intergenic 50.0%
!! GGGGTGAGTTTTCTAGTCTC+TGG + chr7_3:31716030-31716049 Msa1101160:intron 50.0%
AAAGTCACCGGTGCCTAATC+AGG + chr7_3:31717075-31717094 Msa1101160:intron 50.0%
AAGTCACCGGTGCCTAATCA+GGG + chr7_3:31717076-31717095 Msa1101160:intron 50.0%
TTTGGCTGTGCTCCCTGATT+AGG - chr7_3:31717091-31717110 None:intergenic 50.0%
TGGCGTGTGTCTGGGTTATT+TGG - chr7_3:31717307-31717326 None:intergenic 50.0%
TCCCACGTTAATTGCGTGCA+AGG + chr7_3:31717531-31717550 Msa1101160:intron 50.0%
GCCTTGCACGCAATTAACGT+GGG - chr7_3:31717535-31717554 None:intergenic 50.0%
AGCCTTGCACGCAATTAACG+TGG - chr7_3:31717536-31717555 None:intergenic 50.0%
CTGCATCACGTTGAACGTTG+AGG - chr7_3:31718080-31718099 None:intergenic 50.0%
GTGGGAGTAATTGACCTTGG+AGG + chr7_3:31718366-31718385 Msa1101160:CDS 50.0%
GGAGTAATTGACCTTGGAGG+TGG + chr7_3:31712980-31712999 Msa1101160:CDS 50.0%
CAAAGAAGCAACTCGAGCAC+AGG + chr7_3:31713276-31713295 Msa1101160:CDS 50.0%
! CCCTATCCGAGTTGCACTTT+TGG + chr7_3:31714300-31714319 Msa1101160:CDS 50.0%
GGTGGAATATGGAATGGTGG+AGG + chr7_3:31714321-31714340 Msa1101160:CDS 50.0%
! GGAATATGGAATGGTGGAGG+AGG + chr7_3:31714324-31714343 Msa1101160:CDS 50.0%
! CGTTTTGCCTCTGTAAGACG+TGG - chr7_3:31719887-31719906 None:intergenic 50.0%
TATGTCTCAGTGTTGCCGTC+GGG + chr7_3:31720126-31720145 Msa1101160:intron 50.0%
TCCGCGTATGCACTCAAACC+TGG - chr7_3:31709047-31709066 None:intergenic 55.0%
!!! CCCAAGCCTAAGGGGTGTTT+TGG - chr7_3:31709147-31709166 None:intergenic 55.0%
TGTGCCTTTGTAACGCTGCG+GGG + chr7_3:31711108-31711127 Msa1101160:intron 55.0%
! TAGCCGTGTTGGTCCCTTCT+CGG + chr7_3:31711171-31711190 Msa1101160:intron 55.0%
AGGGATAACTCGGGCCAGAT+GGG - chr7_3:31712028-31712047 None:intergenic 55.0%
ATCGATCGGGTCGTAAGTCC+CGG - chr7_3:31712371-31712390 None:intergenic 55.0%
GTGCAACTCGGATAGGGACA+TGG - chr7_3:31714297-31714316 None:intergenic 55.0%
! CGTTTTGCCTCCGTAAGACG+AGG - chr7_3:31714620-31714639 None:intergenic 55.0%
! ATGGCCTCTAGGTACTGCTG+TGG + chr7_3:31714903-31714922 Msa1101160:intron 55.0%
GCTTCCACAGCAGTACCTAG+AGG - chr7_3:31714910-31714929 None:intergenic 55.0%
TCCCCATACGCACTCAAACC+TGG - chr7_3:31715913-31715932 None:intergenic 55.0%
!!! GTTTTGGGGTGCAGATCCTC+AGG - chr7_3:31715997-31716016 None:intergenic 55.0%
TGCACCCCAAAACACCCCTT+AGG + chr7_3:31716004-31716023 Msa1101160:CDS 55.0%
CCCAAAACACCCCTTAGGCT+TGG + chr7_3:31716009-31716028 Msa1101160:CDS 55.0%
!!! CCCAAGCCTAAGGGGTGTTT+TGG - chr7_3:31709147-31709166 None:intergenic 55.0%
TGTGCTCCCTGATTAGGCAC+CGG - chr7_3:31717085-31717104 None:intergenic 55.0%
GTGCAACTCGGATAGGGACA+TGG - chr7_3:31714297-31714316 None:intergenic 55.0%
TGCAGGCAACCGCGGGTTTA+AGG + chr7_3:31711576-31711595 Msa1101160:intron 60.0%
GAGGGATAACTCGGGCCAGA+TGG - chr7_3:31712029-31712048 None:intergenic 60.0%
TCGATCGGGTCGTAAGTCCC+GGG - chr7_3:31712370-31712389 None:intergenic 60.0%
! TGGAATGGTGGAGGAGGGAG+TGG + chr7_3:31714330-31714349 Msa1101160:CDS 60.0%
GTGGAAGCTGCATGGCCTCT+AGG + chr7_3:31714892-31714911 Msa1101160:CDS 60.0%
TGCAGGCAACCGCAGGTTTG+AGG + chr7_3:31717881-31717900 Msa1101160:intron 60.0%
! TGGAATGGTGGAGGAGGGAG+TGG + chr7_3:31714330-31714349 Msa1101160:CDS 60.0%
! GGAATGGTGGAGGAGGGAGT+GGG + chr7_3:31714331-31714350 Msa1101160:CDS 60.0%
GTGGAAGCTGCATGGCCTCT+AGG + chr7_3:31714892-31714911 Msa1101160:CDS 60.0%
! ATGGCCTCTAGGCACTGCTG+TGG + chr7_3:31720322-31720341 Msa1101160:CDS 60.0%
GCTTCCACAGCAGTGCCTAG+AGG - chr7_3:31720329-31720348 None:intergenic 60.0%
GTCGCCCCGCAGCGTTACAA+AGG - chr7_3:31711115-31711134 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 31708553 31720379 31708553 ID=Msa1101160;Name=Msa1101160
chr7_3 mRNA 31708553 31720379 31708553 ID=Msa1101160-mRNA-1;Parent=Msa1101160;Name=Msa1101160-mRNA-1;_AED=0.20;_eAED=0.20;_QI=129|0.82|0.66|1|1|1|18|0|851
chr7_3 exon 31708553 31708951 31708553 ID=Msa1101160-mRNA-1:exon:6784;Parent=Msa1101160-mRNA-1
chr7_3 exon 31709038 31709166 31709038 ID=Msa1101160-mRNA-1:exon:6785;Parent=Msa1101160-mRNA-1
chr7_3 exon 31711581 31711637 31711581 ID=Msa1101160-mRNA-1:exon:6786;Parent=Msa1101160-mRNA-1
chr7_3 exon 31711741 31711833 31711741 ID=Msa1101160-mRNA-1:exon:6787;Parent=Msa1101160-mRNA-1
chr7_3 exon 31712926 31713131 31712926 ID=Msa1101160-mRNA-1:exon:6788;Parent=Msa1101160-mRNA-1
chr7_3 exon 31713261 31713352 31713261 ID=Msa1101160-mRNA-1:exon:6789;Parent=Msa1101160-mRNA-1
chr7_3 exon 31714187 31714401 31714187 ID=Msa1101160-mRNA-1:exon:6790;Parent=Msa1101160-mRNA-1
chr7_3 exon 31714506 31714695 31714506 ID=Msa1101160-mRNA-1:exon:6791;Parent=Msa1101160-mRNA-1
chr7_3 exon 31714833 31714913 31714833 ID=Msa1101160-mRNA-1:exon:6792;Parent=Msa1101160-mRNA-1
chr7_3 exon 31715608 31715774 31715608 ID=Msa1101160-mRNA-1:exon:6793;Parent=Msa1101160-mRNA-1
chr7_3 exon 31715904 31716032 31715904 ID=Msa1101160-mRNA-1:exon:6794;Parent=Msa1101160-mRNA-1
chr7_3 exon 31717886 31717942 31717886 ID=Msa1101160-mRNA-1:exon:6795;Parent=Msa1101160-mRNA-1
chr7_3 exon 31718048 31718140 31718048 ID=Msa1101160-mRNA-1:exon:6796;Parent=Msa1101160-mRNA-1
chr7_3 exon 31718315 31718520 31718315 ID=Msa1101160-mRNA-1:exon:6797;Parent=Msa1101160-mRNA-1
chr7_3 exon 31718647 31718738 31718647 ID=Msa1101160-mRNA-1:exon:6798;Parent=Msa1101160-mRNA-1
chr7_3 exon 31719459 31719673 31719459 ID=Msa1101160-mRNA-1:exon:6799;Parent=Msa1101160-mRNA-1
chr7_3 exon 31719773 31719905 31719773 ID=Msa1101160-mRNA-1:exon:6800;Parent=Msa1101160-mRNA-1
chr7_3 exon 31720252 31720379 31720252 ID=Msa1101160-mRNA-1:exon:6801;Parent=Msa1101160-mRNA-1
chr7_3 five_prime_UTR 31708553 31708681 31708553 ID=Msa1101160-mRNA-1:five_prime_utr;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31708682 31708951 31708682 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31709038 31709166 31709038 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31711581 31711637 31711581 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31711741 31711833 31711741 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31712926 31713131 31712926 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31713261 31713352 31713261 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31714187 31714401 31714187 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31714506 31714695 31714506 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31714833 31714913 31714833 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31715608 31715774 31715608 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31715904 31716032 31715904 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31717886 31717942 31717886 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31718048 31718140 31718048 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31718315 31718520 31718315 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31718647 31718738 31718647 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31719459 31719673 31719459 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31719773 31719905 31719773 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
chr7_3 CDS 31720252 31720379 31720252 ID=Msa1101160-mRNA-1:cds;Parent=Msa1101160-mRNA-1
Gene Sequence

>Msa1101160

ATGGTTTTGCTTTTGCAAAAGACTAAGAGCATGAACTTCCTAACCACACTCATCACATTTCTACTCTTCTTAAATCCTGCTCTCTCTTCCTCCCAATATCTTGGAAAAAACATACTCACTAATCGAAAGATTTTCCCAAAACAAGAAGCCCTAACCTCGTATGTTGTCATATTTGATGCTGGTAGCACTGGTACCCGTGTCCATGTCTACCATTTTGATCAGAACTTAGATCTACTTCACATTGACAATGATATTGAGTTTGTTGACAAGATCAAACCAGGTTTGAGTGCATACGCGGATAATCCTGAAAAAGCAGCAAAATCACTTGTTCCACTTCTAGAAGAAGCAGAGAGTGTAGTCCCTGAAGATCTGCACTCCAAAACACCCCTTAGGCTTGGGGCAACCGCGGGTTTAAGGCTTTTGGATGGGGATCCTGCTGAAAAGATATTGCAAGCGGTAAGGGATATGTTCAGCAACAGAAGTACTCTCAACGTTCAAGCTGATGCAGTTTCAATTATAGATGGAACCCAAGAAGGTTCTTATATGTGGGTGACAGTTAACTATGTATTGGGGAATTTGGGAAAAAGCTTCACAAACACAATGGGAGTAATTGACCTTGGAGGTGGTTCAGTTCAAATGACATATGCAGTGTCAAAGAAAACAGCAAAAAATGCTCCTAAAGTTGCTGATGGCGAGGATCCATATATTAAGAAGCTTGTGCTCAAGGGAAAGCAATATGATCTCTATGTTCATAGTTACTTGCGTTTTGGCAAAGAAGCAACTCGAGCACAGGTTTTGAATGCAACTAATGGATCTGCTAACCCTTGCATTTTACCTGGATTTAATGGGACCTTTACATATTCAGGAGTGGAGTATAAGGCTTTTTCCCCTTCTTCTGGCTCCAACTTTGATGATTGCAAAGAAATAATTCTTAAGGTTCTTAAAGTAAATGATCCATGTCCCTATCCGAGTTGCACTTTTGGTGGAATATGGAATGGTGGAGGAGGGAGTGGACAAAAAAAACTTTTTGTTACTTCAGCTTTCGCTTACCTGGCTGAAGATGTTGGTATGGTTGAGCCAAATAAACCTAATTCCATGCTTCATCCAGTAGATTTCGAAATTGAAGCTAAGCGAGCTTGTGCATTAAACTTTGAGGATGTCAAATCCACTTATCCTCGTCTTACGGAGGCAAAACGTCCATATGTATGCATGGATCTCTTATACCAACATGTGTTGCTTGTTCATGGATTTGGCTTAGATCCTCAACAAGAAATTACAGTGGGGCAGGGAATTCAATATCAGAATTCTGTTGTGGAAGCTGCATGGCCTCTAGGAAACAACCTACTCACTAATCGAAAGATTTTCCAAAAACAAGAAACCTTAACCTCTTACGCTGTCATATTTGATGCTGGTAGCACTGGTACTCGTGTCCATGTTTACCATTTTGACCAAAACTTAGATCTACTTCACATTGGCAATGATATTGAGTTTGTTGACAAGATCAAACCAGGTTTGAGTGCGTATGGGGATAATCCTGAACAAGCAGCAAAATCTCTCATTCCACTTTTGGAGGAAGCAGAAGATGTGGTTCCTGAGGATCTGCACCCCAAAACACCCCTTAGGCTTGGGGCAACCGCAGGTTTGAGGCTTTTGAATGGGGATGCTGCTGAAAAGATATTGCAAGCGACAAGGAATATGTTCAGCAACAGAAGTACCCTCAACGTTCAACGTGATGCAGTTTCTATTATTGATGGAACCCAAGAAGGTTCTTATATGTGGGTGACAGTTAACTATGTATTGGGGAATTTGGGAAAAAGCTTCACAAAATCAGTGGGAGTAATTGACCTTGGAGGTGGTTCAGTTCAAATGACATATGCAGTTTCAAAGAAAACAGCAAAAAATGCTCCAAAAGTTGCAGATGGAGAGGATCCATATATTAAGAAGCTTGTGCTCAAGGGAAAGCAATATGATCTCTATGTTCATAGTTACTTGCGCTTTGGCAAAGAAGCAACTCGAGCACAGGTTTTGAATGCAACTAATGGATCTGCTAACCCTTGCATTTTACCTGGATTTAATGGGACCTTTACATATTCAGGAGTGGAGTATAAGGCTTTTTCCCCTTCTTCTGGCTCCAACTTTGATGATTGCAAAGAAATAATTCTTAAGGTTCTTAAAGTAAATGATCCATGTCCCTATCCGAGTTGCACTTTTGGTGGAATATGGAATGGTGGAGGAGGGAGTGGGCAAAAGAAACTTTTTGTTACTTCAGCTTTCGCTTACCTGGCTGAAGATGTTGGTATGGTTGAGCCAAATAAACCTAATTCCATACTTCATCCAGTAGATTTTGAAATTGAAGCTAAGCGAGCTTGTGCATTAAACTTTGAGGATGTCAAATCCACTTATCCACGTCTTACAGAGGCAAAACGCTTAGGTCCACGAAAAGAGATTACAGTAGGTGAGGGAATTCAATATCAGAATTCTGTTGTGGAAGCTGCATGGCCTCTAGGCACTGCTGTGGAAGCCATATCAGCGTTACCTAAGTTTAAGCGATTA
Protein sequence

>Msa1101160

MVLLLQKTKSMNFLTTLITFLLFLNPALSSSQYLGKNILTNRKIFPKQEALTSYVVIFDAGSTGTRVHVYHFDQNLDLLHIDNDIEFVDKIKPGLSAYADNPEKAAKSLVPLLEEAESVVPEDLHSKTPLRLGATAGLRLLDGDPAEKILQAVRDMFSNRSTLNVQADAVSIIDGTQEGSYMWVTVNYVLGNLGKSFTNTMGVIDLGGGSVQMTYAVSKKTAKNAPKVADGEDPYIKKLVLKGKQYDLYVHSYLRFGKEATRAQVLNATNGSANPCILPGFNGTFTYSGVEYKAFSPSSGSNFDDCKEIILKVLKVNDPCPYPSCTFGGIWNGGGGSGQKKLFVTSAFAYLAEDVGMVEPNKPNSMLHPVDFEIEAKRACALNFEDVKSTYPRLTEAKRPYVCMDLLYQHVLLVHGFGLDPQQEITVGQGIQYQNSVVEAAWPLGNNLLTNRKIFQKQETLTSYAVIFDAGSTGTRVHVYHFDQNLDLLHIGNDIEFVDKIKPGLSAYGDNPEQAAKSLIPLLEEAEDVVPEDLHPKTPLRLGATAGLRLLNGDAAEKILQATRNMFSNRSTLNVQRDAVSIIDGTQEGSYMWVTVNYVLGNLGKSFTKSVGVIDLGGGSVQMTYAVSKKTAKNAPKVADGEDPYIKKLVLKGKQYDLYVHSYLRFGKEATRAQVLNATNGSANPCILPGFNGTFTYSGVEYKAFSPSSGSNFDDCKEIILKVLKVNDPCPYPSCTFGGIWNGGGGSGQKKLFVTSAFAYLAEDVGMVEPNKPNSILHPVDFEIEAKRACALNFEDVKSTYPRLTEAKRLGPRKEITVGEGIQYQNSVVEAAWPLGTAVEAISALPKFKRL