AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1070630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1070630 MtrunA17_Chr7g0253111 95.273 275 11 1 1 275 1 273 0.0 549
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1070630 AT2G23840.1 78.453 181 38 1 93 273 99 278 4.37e-106 310

Find 81 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCATTTGTTTAGAGTTTA+TGG 0.065753 7_2:-66962433 Msa1070630:CDS
GTGATGGCTTGTCTGGTTTC+AGG 0.083001 7_2:-66962772 Msa1070630:CDS
AAGAGTTCTGACCGCGAAAA+AGG 0.223811 7_2:-66956998 Msa1070630:CDS
TAAACAATGCTATTCAATAT+TGG 0.260654 7_2:-66956786 Msa1070630:three_prime_UTR
TTTCTTCTTCTATCTATAAT+GGG 0.279334 7_2:-66963163 Msa1070630:five_prime_UTR
AAACAATGCTATTCAATATT+GGG 0.305813 7_2:-66956785 Msa1070630:three_prime_UTR
GTAACTTGTTCTTCTCTTGT+GGG 0.315212 7_2:+66962970 None:intergenic
CTTAGAGCTGCTGCTGTTAG+AGG 0.315554 7_2:+66957018 None:intergenic
TCTATATACCAGCTGTCTTA+AGG 0.324607 7_2:-66962006 Msa1070630:CDS
TCCTTTCTTTGAGTTGCATC+TGG 0.332427 7_2:+66957342 None:intergenic
TTGTGTTGGATATATCTTAC+AGG 0.338812 7_2:-66962745 Msa1070630:intron
CGCTTGAAGCTTCTCTTCAA+TGG 0.357051 7_2:-66963022 Msa1070630:CDS
CTATATACCAGCTGTCTTAA+GGG 0.359416 7_2:-66962005 Msa1070630:intron
CTTAGAACCATGGGTTAGTC+TGG 0.376373 7_2:-66956939 Msa1070630:exon
TGATGGCTTGTCTGGTTTCA+GGG 0.383664 7_2:-66962771 Msa1070630:CDS
TGTAACTTGTTCTTCTCTTG+TGG 0.389234 7_2:+66962969 None:intergenic
TTCATCATGAACACCTTCAC+TGG 0.398644 7_2:+66962856 None:intergenic
TTTGATGGTGATGGCTTGTC+TGG 0.398764 7_2:-66962779 Msa1070630:CDS
CTGCCTAATGTATGTTATGA+TGG 0.406561 7_2:-66956733 Msa1070630:three_prime_UTR
ATTAACATTTCATCATCAAT+TGG 0.407496 7_2:+66956811 None:intergenic
GCGAGAATGTCATAGTCCTT+TGG 0.424618 7_2:+66957045 None:intergenic
CTCCATAAACTCTAAACAAA+TGG 0.426039 7_2:+66962431 None:intergenic
CATTGTCCACCCACTGCAGC+TGG 0.438963 7_2:+66959438 None:intergenic
AAAGAGAATCGTAGCGTGTC+TGG 0.442688 7_2:+66956890 None:intergenic
AACACTTCCCTTTGCTTCTG+AGG 0.456712 7_2:+66962897 None:intergenic
GAAAGGACGAAAGTCCTTAG+AGG 0.463003 7_2:-66957326 Msa1070630:CDS
GATGGCTCAGACCTTCTCAT+TGG 0.466843 7_2:-66956715 Msa1070630:three_prime_UTR
GATGATGATGATGTATTTGA+TGG 0.487363 7_2:-66962794 Msa1070630:CDS
AGATACTGACGCCATTCATC+AGG 0.493348 7_2:+66956970 None:intergenic
TGGTTTCAGGGGTCTTGTGT+TGG 0.497610 7_2:-66962759 Msa1070630:CDS
GGCCAGTCAATGTTGTATGC+TGG 0.505235 7_2:-66962461 Msa1070630:CDS
TTTAAGACTAAATAACCAAA+GGG 0.509409 7_2:-66963070 Msa1070630:five_prime_UTR
TTCTTCTTCTATCTATAATG+GGG 0.511468 7_2:-66963162 Msa1070630:five_prime_UTR
TTCCAGCATACAACATTGAC+TGG 0.512985 7_2:+66962459 None:intergenic
GAGCCATCATAACATACATT+AGG 0.513459 7_2:+66956730 None:intergenic
CAAGTACAAAATATCTCTGT+AGG 0.517369 7_2:-66963122 Msa1070630:five_prime_UTR
TCACGTTGTGCCAGCTGCAG+TGG 0.517496 7_2:-66959448 Msa1070630:CDS
GTGAACTGTGCCATACCCTT+TGG 0.522077 7_2:+66963055 None:intergenic
AGCTGCTGCTGTTAGAGGTA+TGG 0.522365 7_2:+66957023 None:intergenic
TAAGTTCCTCTTAGAACCAT+GGG 0.522559 7_2:-66956948 Msa1070630:exon
AAAAGGGCACACCTGATGAA+TGG 0.523171 7_2:-66956981 Msa1070630:CDS
TCATTGGTATGTAATAGTCT+TGG 0.523560 7_2:-66956699 Msa1070630:three_prime_UTR
TTGTTTAGAGTTTATGGAGA+AGG 0.524127 7_2:-66962427 Msa1070630:intron
GATGGCTTGTCTGGTTTCAG+GGG 0.524722 7_2:-66962770 Msa1070630:CDS
TGGTATATAGAAAGATCCAC+TGG 0.525235 7_2:+66962018 None:intergenic
CTTCATACCTCAGAAGCAAA+GGG 0.531192 7_2:-66962904 Msa1070630:CDS
CAGTGGGTGGACAATGGACA+TGG 0.531472 7_2:-66959431 Msa1070630:CDS
GACTAACCCATGGTTCTAAG+AGG 0.532292 7_2:+66956942 None:intergenic
TCCAGATGCAACTCAAAGAA+AGG 0.539778 7_2:-66957343 Msa1070630:CDS
AGAAACTGTGTCATCTCTCA+TGG 0.541184 7_2:-66962999 Msa1070630:CDS
AGAACCATGGGTTAGTCTGG+TGG 0.542942 7_2:-66956936 Msa1070630:three_prime_UTR
TCTTCATACCTCAGAAGCAA+AGG 0.544774 7_2:-66962905 Msa1070630:CDS
CTAAGTTCCTCTTAGAACCA+TGG 0.545502 7_2:-66956949 Msa1070630:exon
GACTAAATAACCAAAGGGTA+TGG 0.548580 7_2:-66963065 Msa1070630:exon
CACGTTGTGCCAGCTGCAGT+GGG 0.556043 7_2:-66959447 Msa1070630:CDS
GATGAGAGGGTTAAATTCTG+AGG 0.562388 7_2:+66956644 None:intergenic
GGACATACCCTTAAGACAGC+TGG 0.563393 7_2:+66961998 None:intergenic
TAGTCAAGAACAGTCTTAGT+CGG 0.564841 7_2:-66960225 Msa1070630:CDS
GATGATGTATTTGATGGTGA+TGG 0.576113 7_2:-66962788 Msa1070630:CDS
TGAATATGATTCTGTTGATG+AGG 0.582241 7_2:-66962819 Msa1070630:CDS
TGCAAACATAATAGATGAGA+GGG 0.585007 7_2:+66956631 None:intergenic
CTTACAATAACCTATTTGTG+AGG 0.588278 7_2:+66956839 None:intergenic
AGCTGGCACAACGTGATCGA+TGG 0.589820 7_2:+66959455 None:intergenic
GCTGAGGCACGTCCCAGTGA+AGG 0.590374 7_2:-66962869 Msa1070630:CDS
TCTTGTTATTCAGAAACCAA+AGG 0.601581 7_2:-66957061 Msa1070630:intron
ATGCAAACATAATAGATGAG+AGG 0.611965 7_2:+66956630 None:intergenic
CAGCTGCAGTGGGTGGACAA+TGG 0.613401 7_2:-66959437 Msa1070630:CDS
GAAGTTGATTAAGGTCCCAA+AGG 0.616973 7_2:-66957293 Msa1070630:intron
ACTATTACATACCAATGAGA+AGG 0.620219 7_2:+66956704 None:intergenic
AAGAGAAGAACAAGTTACAA+AGG 0.622533 7_2:-66962965 Msa1070630:CDS
GTTGTGCCAGCTGCAGTGGG+TGG 0.629063 7_2:-66959444 Msa1070630:CDS
ATGGCACAGTTCACTGCACA+AGG 0.629424 7_2:-66963046 Msa1070630:CDS
AGGGAAGTGTTGTAATGCTG+AGG 0.635804 7_2:-66962885 Msa1070630:CDS
TAGCGTGTCTGGCATCACAC+AGG 0.651851 7_2:+66956901 None:intergenic
TCATCATGAACACCTTCACT+GGG 0.662574 7_2:+66962857 None:intergenic
GGTATATAGAAAGATCCACT+GGG 0.672250 7_2:+66962019 None:intergenic
TGAGGTATGAAGAAGATGCA+TGG 0.700753 7_2:+66962915 None:intergenic
AGTGGGTGGACAATGGACAT+GGG 0.715330 7_2:-66959430 Msa1070630:CDS
GCAACCACCAGACTAACCCA+TGG 0.719996 7_2:+66956932 None:intergenic
TATATAGAAAGATCCACTGG+GGG 0.730035 7_2:+66962021 None:intergenic
GTATATAGAAAGATCCACTG+GGG 0.764928 7_2:+66962020 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTAATAATTTTAATTCTT+GGG + chr7_2:66959138-66959157 None:intergenic 10.0%
!! AAAATTATTAAACCATTAAA+TGG - chr7_2:66959145-66959164 Msa1070630:intron 10.0%
!!! TTTTTTTTTCATAAAGTAAA+CGG - chr7_2:66962226-66962245 Msa1070630:intron 10.0%
!! TAATTATTAAATGGTAATTA+AGG + chr7_2:66962456-66962475 None:intergenic 10.0%
!! TTTATGAAATTATATAAGCT+TGG + chr7_2:66957241-66957260 None:intergenic 15.0%
!!! TGTATTTTGTTGTTATAAAA+TGG - chr7_2:66958008-66958027 Msa1070630:intron 15.0%
!!! AAACATGTATACTATTTTAT+TGG - chr7_2:66958249-66958268 Msa1070630:intron 15.0%
!!! GGTTTAATAATTTTAATTCT+TGG + chr7_2:66959139-66959158 None:intergenic 15.0%
!! AATATAAATGTATAAGAACA+GGG + chr7_2:66959800-66959819 None:intergenic 15.0%
!! TAATATAAATGTATAAGAAC+AGG + chr7_2:66959801-66959820 None:intergenic 15.0%
!!! TTTTTTGTAATTATAGTATC+CGG - chr7_2:66959920-66959939 Msa1070630:intron 15.0%
!! TTAATTAGTTAAATAGATAC+TGG - chr7_2:66960791-66960810 Msa1070630:intron 15.0%
!! TAATTAGTTAAATAGATACT+GGG - chr7_2:66960792-66960811 Msa1070630:intron 15.0%
!!! CCTTTTATATTAAAAATGAA+TGG + chr7_2:66961647-66961666 None:intergenic 15.0%
!!! CCATTCATTTTTAATATAAA+AGG - chr7_2:66961644-66961663 Msa1070630:intron 15.0%
!!! ATTTTTAATATAAAAGGATC+TGG - chr7_2:66961650-66961669 Msa1070630:intron 15.0%
!! ATTGCAGATTAATTATTAAA+TGG + chr7_2:66962465-66962484 None:intergenic 15.0%
!!! TAATCTGTAATGATATTTTT+TGG - chr7_2:66962506-66962525 Msa1070630:intron 15.0%
!!! CTTTTAATGTAATTAAAACT+TGG + chr7_2:66962729-66962748 None:intergenic 15.0%
!! AAAGAAAAATATTTGTGTCA+CGG + chr7_2:66956653-66956672 None:intergenic 20.0%
!! AGCAAAAACATTGAAATTTA+AGG + chr7_2:66956697-66956716 None:intergenic 20.0%
!!! TTTTCTTCTTCTATCTATAA+TGG - chr7_2:66956725-66956744 Msa1070630:three_prime_UTR 20.0%
!! TTTCTTCTTCTATCTATAAT+GGG - chr7_2:66956726-66956745 Msa1070630:three_prime_UTR 20.0%
!!! TTTTAAGACTAAATAACCAA+AGG - chr7_2:66956818-66956837 Msa1070630:three_prime_UTR 20.0%
!!! TTTAAGACTAAATAACCAAA+GGG - chr7_2:66956819-66956838 Msa1070630:three_prime_UTR 20.0%
!!! AAACAAAATTGATAATGAGT+TGG - chr7_2:66957266-66957285 Msa1070630:intron 20.0%
!!! ATTTCAGATTTTGTTTATAC+AGG - chr7_2:66957809-66957828 Msa1070630:intron 20.0%
!!! ATATACCAAAAGTATTACTT+CGG + chr7_2:66957922-66957941 None:intergenic 20.0%
!! ATTATTAAACCATTAAATGG+TGG - chr7_2:66959148-66959167 Msa1070630:intron 20.0%
!! ATAACAATGTAATATGAGAA+GGG + chr7_2:66960212-66960231 None:intergenic 20.0%
!! CAAAAAATATTCTAATGCAA+TGG - chr7_2:66960303-66960322 Msa1070630:intron 20.0%
!!! ATACTAAATTTTACAAAAGG+AGG + chr7_2:66960547-66960566 None:intergenic 20.0%
!!! TGCATACTAAATTTTACAAA+AGG + chr7_2:66960550-66960569 None:intergenic 20.0%
!! AGAAAATAATCAATTCTGTT+AGG - chr7_2:66960710-66960729 Msa1070630:intron 20.0%
!! AATTAGTTAAATAGATACTG+GGG - chr7_2:66960793-66960812 Msa1070630:intron 20.0%
!!! ATTTGATTAGTTGTTTTGAA+AGG - chr7_2:66960845-66960864 Msa1070630:intron 20.0%
!!! ATTTTCTATTTCAATTTCTC+CGG - chr7_2:66960943-66960962 Msa1070630:intron 20.0%
!! AAAATCATCAGGTTTAAAAA+TGG - chr7_2:66961100-66961119 Msa1070630:intron 20.0%
!! TTACTATTTGTTCTTGATTT+AGG + chr7_2:66961337-66961356 None:intergenic 20.0%
!!! TTAGATTATAAGTTGATCAT+AGG - chr7_2:66961401-66961420 Msa1070630:intron 20.0%
!!! GTTAATTGTTTCTTGTAAAA+AGG + chr7_2:66961485-66961504 None:intergenic 20.0%
!! CATTGAATAATTTATGTATG+TGG - chr7_2:66961515-66961534 Msa1070630:intron 20.0%
!! CATTGAATAATTTATGTATC+TGG + chr7_2:66961554-66961573 None:intergenic 20.0%
!!! GTCAATTGTTACTTATATAT+AGG - chr7_2:66961584-66961603 Msa1070630:intron 20.0%
!!! AAGAGAATATTTCTACTTTT+GGG + chr7_2:66962331-66962350 None:intergenic 20.0%
!!! TAAGAGAATATTTCTACTTT+TGG + chr7_2:66962332-66962351 None:intergenic 20.0%
!! ATTAAATGGTAATTAAGGTA+GGG + chr7_2:66962451-66962470 None:intergenic 20.0%
!! TATTAAATGGTAATTAAGGT+AGG + chr7_2:66962452-66962471 None:intergenic 20.0%
!! ATTAACATTTCATCATCAAT+TGG + chr7_2:66963081-66963100 None:intergenic 20.0%
!! TAAACAATGCTATTCAATAT+TGG - chr7_2:66963103-66963122 Msa1070630:five_prime_UTR 20.0%
!! AAACAATGCTATTCAATATT+GGG - chr7_2:66963104-66963123 Msa1070630:five_prime_UTR 20.0%
! TTCTTCTTCTATCTATAATG+GGG - chr7_2:66956727-66956746 Msa1070630:three_prime_UTR 25.0%
! ATGTATAGTTTAAAAAACCG+TGG - chr7_2:66957566-66957585 Msa1070630:intron 25.0%
!! CATGTATACTATTTTATTGG+TGG - chr7_2:66958252-66958271 Msa1070630:intron 25.0%
!! TATACTATTTTATTGGTGGA+AGG - chr7_2:66958256-66958275 Msa1070630:intron 25.0%
! TTACTTTAGTAGGTTTACAT+CGG + chr7_2:66958685-66958704 None:intergenic 25.0%
!! GCTTTTAAACTTCTACATAT+GGG + chr7_2:66958771-66958790 None:intergenic 25.0%
!! TGCTTTTAAACTTCTACATA+TGG + chr7_2:66958772-66958791 None:intergenic 25.0%
!!! TTGTTATTTAAACTGCTACA+CGG + chr7_2:66958910-66958929 None:intergenic 25.0%
!! ACTATATTATGTGCTATTGA+TGG - chr7_2:66958970-66958989 Msa1070630:intron 25.0%
! ATAACAACATAGTTCATTCA+TGG + chr7_2:66959014-66959033 None:intergenic 25.0%
! TGATATCTAAAAACAAGTTC+CGG + chr7_2:66959100-66959119 None:intergenic 25.0%
! TAATTCTTGGGCAAAATATA+TGG + chr7_2:66959126-66959145 None:intergenic 25.0%
! TTAGTAAATCCACCATTTAA+TGG + chr7_2:66959160-66959179 None:intergenic 25.0%
!! AGCTCAACATATACTTATTT+TGG - chr7_2:66959599-66959618 Msa1070630:intron 25.0%
! ACTTCGATTTCAAATATATC+TGG - chr7_2:66959741-66959760 Msa1070630:intron 25.0%
! TTATATTAGATTCGATGAGA+CGG - chr7_2:66959813-66959832 Msa1070630:intron 25.0%
!! ATAAAGGATCTATGATTTTC+TGG + chr7_2:66960086-66960105 None:intergenic 25.0%
!!! TTGACTTTGTTGTTATGTAT+TGG - chr7_2:66960108-66960127 Msa1070630:intron 25.0%
! TAACAATGTAATATGAGAAG+GGG + chr7_2:66960211-66960230 None:intergenic 25.0%
! CATAACAATGTAATATGAGA+AGG + chr7_2:66960213-66960232 None:intergenic 25.0%
!!! TCAGTTTTGTATCAAATGAA+AGG + chr7_2:66960648-66960667 None:intergenic 25.0%
! AGTAATTAGAAAACTTTGAG+CGG - chr7_2:66960750-66960769 Msa1070630:intron 25.0%
!! TTTTCTATTTCAATTTCTCC+GGG - chr7_2:66960944-66960963 Msa1070630:intron 25.0%
! GAAATAATTTGAAAGTAACC+CGG + chr7_2:66960965-66960984 None:intergenic 25.0%
! ATTGCAATACAGTTTAAACT+TGG + chr7_2:66961040-66961059 None:intergenic 25.0%
!! GTGAGATTTTAGATAAAAAG+AGG - chr7_2:66961207-66961226 Msa1070630:intron 25.0%
! TCTATGAATCTCTATAAGTA+GGG + chr7_2:66961308-66961327 None:intergenic 25.0%
! CGTATCTTAGATTATTTCAT+AGG + chr7_2:66961380-66961399 None:intergenic 25.0%
!! TTGTTTCTTGTAAAAAGGAT+CGG + chr7_2:66961480-66961499 None:intergenic 25.0%
! AATATAAGAAAATACTCCTC+TGG + chr7_2:66961611-66961630 None:intergenic 25.0%
! GATGACAAAATAAGAATGAA+AGG - chr7_2:66961689-66961708 Msa1070630:intron 25.0%
! AAAACTGGAAGAGAATTATA+AGG - chr7_2:66961764-66961783 Msa1070630:intron 25.0%
!!! GTTAATTTTAAAAGCTCACA+AGG + chr7_2:66962180-66962199 None:intergenic 25.0%
! AGAAATCAGTTAGAAAGTTA+AGG + chr7_2:66962254-66962273 None:intergenic 25.0%
!!! TGATTTCTAGTTTACCTTAA+TGG - chr7_2:66962266-66962285 Msa1070630:intron 25.0%
!!! GATTTCTAGTTTACCTTAAT+GGG - chr7_2:66962267-66962286 Msa1070630:intron 25.0%
!!! GTAATGATATTTTTTGGTAC+AGG - chr7_2:66962512-66962531 Msa1070630:intron 25.0%
!! AGCAAAAATGAAGTTGATTA+AGG - chr7_2:66962587-66962606 Msa1070630:intron 25.0%
! AAACTTGGAATTCTTAACAT+TGG + chr7_2:66962714-66962733 None:intergenic 25.0%
!!! TACCTATTTTAGCATATTCA+TGG - chr7_2:66962765-66962784 Msa1070630:CDS 25.0%
! AACCATGAATATGCTAAAAT+AGG + chr7_2:66962770-66962789 None:intergenic 25.0%
!!! GATTTTTCTCTTTGCTTTTT+CGG + chr7_2:66963031-66963050 None:intergenic 25.0%
CAAGTACAAAATATCTCTGT+AGG - chr7_2:66956767-66956786 Msa1070630:three_prime_UTR 30.0%
AAGAGAAGAACAAGTTACAA+AGG - chr7_2:66956924-66956943 Msa1070630:three_prime_UTR 30.0%
TGAATATGATTCTGTTGATG+AGG - chr7_2:66957070-66957089 Msa1070630:intron 30.0%
! GATGATGATGATGTATTTGA+TGG - chr7_2:66957095-66957114 Msa1070630:intron 30.0%
TTGTGTTGGATATATCTTAC+AGG - chr7_2:66957144-66957163 Msa1070630:intron 30.0%
! TGCCATTTGTTTAGAGTTTA+TGG - chr7_2:66957456-66957475 Msa1070630:intron 30.0%
CTCCATAAACTCTAAACAAA+TGG + chr7_2:66957461-66957480 None:intergenic 30.0%
! TTGTTTAGAGTTTATGGAGA+AGG - chr7_2:66957462-66957481 Msa1070630:intron 30.0%
!! CTTCAACATTCTAAAATCAC+TGG - chr7_2:66957959-66957978 Msa1070630:intron 30.0%
ATTCTCTTTCACTTGTAACT+AGG + chr7_2:66958036-66958055 None:intergenic 30.0%
! ACTAGGAACCGTTTTATATA+CGG + chr7_2:66958065-66958084 None:intergenic 30.0%
!! AAACTGTTGTTTCAGTAACT+AGG + chr7_2:66958082-66958101 None:intergenic 30.0%
ATGTTAGATTGTTAGTTCCT+AGG - chr7_2:66958347-66958366 Msa1070630:intron 30.0%
TCTGTTAGAAAGATAAGAAG+TGG + chr7_2:66958586-66958605 None:intergenic 30.0%
AATCCATAAATCTATCTAGC+TGG + chr7_2:66958627-66958646 None:intergenic 30.0%
CCTACTAAAGTAATCAACTA+CGG - chr7_2:66958692-66958711 Msa1070630:intron 30.0%
ATACCAGTGATTATGAACTA+AGG - chr7_2:66958722-66958741 Msa1070630:intron 30.0%
TACCAGTGATTATGAACTAA+GGG - chr7_2:66958723-66958742 Msa1070630:intron 30.0%
TCCATGTCTACTTATAGTAA+AGG - chr7_2:66958800-66958819 Msa1070630:intron 30.0%
CCATGTCTACTTATAGTAAA+GGG - chr7_2:66958801-66958820 Msa1070630:intron 30.0%
CATGTCTACTTATAGTAAAG+GGG - chr7_2:66958802-66958821 Msa1070630:intron 30.0%
ATGTCTACTTATAGTAAAGG+GGG - chr7_2:66958803-66958822 Msa1070630:intron 30.0%
GGAAGTTGTATTATCAATCT+TGG - chr7_2:66958871-66958890 Msa1070630:intron 30.0%
! TGTTATTTAAACTGCTACAC+GGG + chr7_2:66958909-66958928 None:intergenic 30.0%
AGCACATAATATAGTTTACG+TGG + chr7_2:66958965-66958984 None:intergenic 30.0%
! GAACTATCATGATTGTTTCT+TGG - chr7_2:66959283-66959302 Msa1070630:intron 30.0%
AAGAAGATATCAGTGAAAAG+AGG - chr7_2:66959369-66959388 Msa1070630:intron 30.0%
GTCAGGTATTATATACCTTA+GGG + chr7_2:66959453-66959472 None:intergenic 30.0%
GTTAGAAGTTAGTTCATTTC+TGG + chr7_2:66959475-66959494 None:intergenic 30.0%
ACTTGTAAACAGTAGTTAGA+GGG + chr7_2:66959497-66959516 None:intergenic 30.0%
GTTGTTTGTCTGCTTTAATA+CGG - chr7_2:66959573-66959592 Msa1070630:intron 30.0%
!!! ACATATACTTATTTTGGTGC+AGG - chr7_2:66959605-66959624 Msa1070630:intron 30.0%
AGAATGAGTTCATCAAATTC+CGG + chr7_2:66959942-66959961 None:intergenic 30.0%
! TTAACCTACTTTGCCTTTTA+GGG + chr7_2:66960056-66960075 None:intergenic 30.0%
! TTTAACCTACTTTGCCTTTT+AGG + chr7_2:66960057-66960076 None:intergenic 30.0%
AACAACAAAGTCAAGCATAA+AGG + chr7_2:66960102-66960121 None:intergenic 30.0%
ACAGTTCTCAACTATAGAAA+TGG + chr7_2:66960162-66960181 None:intergenic 30.0%
TAGTTGAGAACTGTGTATAA+TGG - chr7_2:66960168-66960187 Msa1070630:intron 30.0%
TTCAATCTCTACTAACTCAA+TGG + chr7_2:66960348-66960367 None:intergenic 30.0%
AGAGCAATACCTGTTATATT+CGG + chr7_2:66960398-66960417 None:intergenic 30.0%
!! AATTACTTTTGCGTCATCTT+TGG + chr7_2:66960737-66960756 None:intergenic 30.0%
! AAGGAAATTGGTTTCTTAGA+TGG + chr7_2:66961128-66961147 None:intergenic 30.0%
TTTGATTGCGAAAAGGAAAT+TGG + chr7_2:66961140-66961159 None:intergenic 30.0%
TCAACAATAACTACAGTTCT+TGG + chr7_2:66961183-66961202 None:intergenic 30.0%
GTCTATGAATCTCTATAAGT+AGG + chr7_2:66961309-66961328 None:intergenic 30.0%
TTACTTATATATAGGACCAG+AGG - chr7_2:66961592-66961611 Msa1070630:intron 30.0%
! ATCTGGTTCAAGTTATTAGT+GGG - chr7_2:66961667-66961686 Msa1070630:intron 30.0%
TGGAATTAAACATCAACCAT+TGG - chr7_2:66961729-66961748 Msa1070630:intron 30.0%
!!! TTTTAACTTTCTGTCACCAA+TGG + chr7_2:66961748-66961767 None:intergenic 30.0%
TAAGGAATGTAGAGAAAACT+AGG - chr7_2:66961782-66961801 Msa1070630:intron 30.0%
ACTATTGAAGTGAATCATTG+TGG - chr7_2:66962031-66962050 Msa1070630:CDS 30.0%
! GAATCATTGTGTGCAAATTT+TGG + chr7_2:66962137-66962156 None:intergenic 30.0%
!! GTTAAGATGAAAGTACCTTT+GGG + chr7_2:66962614-66962633 None:intergenic 30.0%
!! TGTTAAGATGAAAGTACCTT+TGG + chr7_2:66962615-66962634 None:intergenic 30.0%
TATGATGCCTTAGCATAAAA+AGG - chr7_2:66962660-66962679 Msa1070630:intron 30.0%
! ATTGTTGCCTTTTTATGCTA+AGG + chr7_2:66962670-66962689 None:intergenic 30.0%
!! TCTTGTTATTCAGAAACCAA+AGG - chr7_2:66962828-66962847 Msa1070630:CDS 30.0%
AGAGAAAAATCCTCACAAAT+AGG - chr7_2:66963040-66963059 Msa1070630:CDS 30.0%
CTTACAATAACCTATTTGTG+AGG + chr7_2:66963053-66963072 None:intergenic 30.0%
ACTATTACATACCAATGAGA+AGG + chr7_2:66963188-66963207 None:intergenic 30.0%
TCATTGGTATGTAATAGTCT+TGG - chr7_2:66963190-66963209 Msa1070630:five_prime_UTR 30.0%
GACTAAATAACCAAAGGGTA+TGG - chr7_2:66956824-66956843 Msa1070630:three_prime_UTR 35.0%
!! GTAACTTGTTCTTCTCTTGT+GGG + chr7_2:66956922-66956941 None:intergenic 35.0%
!! TGTAACTTGTTCTTCTCTTG+TGG + chr7_2:66956923-66956942 None:intergenic 35.0%
!! GATGATGTATTTGATGGTGA+TGG - chr7_2:66957101-66957120 Msa1070630:intron 35.0%
TCAGCAGAAGTCTTGAATAT+TGG + chr7_2:66957368-66957387 None:intergenic 35.0%
CTCAGCTTAATGAAACTAAC+AGG + chr7_2:66957665-66957684 None:intergenic 35.0%
TATATAGAAAGATCCACTGG+GGG + chr7_2:66957871-66957890 None:intergenic 35.0%
GTATATAGAAAGATCCACTG+GGG + chr7_2:66957872-66957891 None:intergenic 35.0%
GGTATATAGAAAGATCCACT+GGG + chr7_2:66957873-66957892 None:intergenic 35.0%
TGGTATATAGAAAGATCCAC+TGG + chr7_2:66957874-66957893 None:intergenic 35.0%
TCTATATACCAGCTGTCTTA+AGG - chr7_2:66957883-66957902 Msa1070630:intron 35.0%
CTATATACCAGCTGTCTTAA+GGG - chr7_2:66957884-66957903 Msa1070630:intron 35.0%
!! ACCAAAAGTATTACTTCGGA+GGG + chr7_2:66957918-66957937 None:intergenic 35.0%
!! TACCAAAAGTATTACTTCGG+AGG + chr7_2:66957919-66957938 None:intergenic 35.0%
ATGACTCGCCGTATATAAAA+CGG - chr7_2:66958054-66958073 Msa1070630:intron 35.0%
GCATATACACAGTTGTTAGA+GGG + chr7_2:66958173-66958192 None:intergenic 35.0%
TGCATATACACAGTTGTTAG+AGG + chr7_2:66958174-66958193 None:intergenic 35.0%
TGTGTATATGCAGAACTATC+TGG - chr7_2:66958182-66958201 Msa1070630:intron 35.0%
! TTTTATTGGTGGAAGGTAGA+AGG - chr7_2:66958263-66958282 Msa1070630:intron 35.0%
TTTATTGGTGGAAGGTAGAA+GGG - chr7_2:66958264-66958283 Msa1070630:intron 35.0%
GTCTATCCATAGAAAAACTC+TGG + chr7_2:66958304-66958323 None:intergenic 35.0%
GTTTAGTAAACATGACCAAG+AGG + chr7_2:66958455-66958474 None:intergenic 35.0%
TCAACAAAATGTTAGGTGAG+GGG + chr7_2:66958485-66958504 None:intergenic 35.0%
GTCAACAAAATGTTAGGTGA+GGG + chr7_2:66958486-66958505 None:intergenic 35.0%
AGACTCGTCAACAAAATGTT+AGG + chr7_2:66958492-66958511 None:intergenic 35.0%
CTCTTTCAAAGCTTTCAAAG+GGG + chr7_2:66958539-66958558 None:intergenic 35.0%
CCTCTTTCAAAGCTTTCAAA+GGG + chr7_2:66958540-66958559 None:intergenic 35.0%
!! CCTTTGAAAGCTTTGAAAGA+GGG - chr7_2:66958538-66958557 Msa1070630:intron 35.0%
AGAAAGATAAGAAGTGGTCA+TGG + chr7_2:66958580-66958599 None:intergenic 35.0%
CAACCAGCTAGATAGATTTA+TGG - chr7_2:66958621-66958640 Msa1070630:intron 35.0%
CCGTAGTTGATTACTTTAGT+AGG + chr7_2:66958695-66958714 None:intergenic 35.0%
TGAACTAAGGGCAGTAAAAA+TGG - chr7_2:66958735-66958754 Msa1070630:intron 35.0%
AACTTCTACATATGGGTCTT+TGG + chr7_2:66958764-66958783 None:intergenic 35.0%
CCCTTTACTATAAGTAGACA+TGG + chr7_2:66958804-66958823 None:intergenic 35.0%
CTTTCGTAGTTATGAAAGCT+GGG - chr7_2:66959036-66959055 Msa1070630:intron 35.0%
TAAAAACAAGTTCCGGTTCA+TGG + chr7_2:66959093-66959112 None:intergenic 35.0%
TCTCCAGGATGAACATAATA+CGG - chr7_2:66959196-66959215 Msa1070630:intron 35.0%
GTTTCTTGGCATTATGAGAA+TGG - chr7_2:66959297-66959316 Msa1070630:intron 35.0%
TTCTGCTTTGCTAACTAAGA+TGG + chr7_2:66959351-66959370 None:intergenic 35.0%
ATTGACCTTCTCATTCTTAC+TGG - chr7_2:66959402-66959421 Msa1070630:intron 35.0%
TTGCACACATATATACCCTA+AGG - chr7_2:66959435-66959454 Msa1070630:CDS 35.0%
GGTCAGGTATTATATACCTT+AGG + chr7_2:66959454-66959473 None:intergenic 35.0%
!! AAGTTAGTTCATTTCTGGTC+AGG + chr7_2:66959470-66959489 None:intergenic 35.0%
CACTTGTAAACAGTAGTTAG+AGG + chr7_2:66959498-66959517 None:intergenic 35.0%
CTCTAACTACTGTTTACAAG+TGG - chr7_2:66959496-66959515 Msa1070630:intron 35.0%
TAGTCAAGAACAGTCTTAGT+CGG - chr7_2:66959664-66959683 Msa1070630:intron 35.0%
! ATATTAGAGCACTTACTGAC+AGG + chr7_2:66959718-66959737 None:intergenic 35.0%
TCAATGAGTGAGAACAATAG+TGG + chr7_2:66959966-66959985 None:intergenic 35.0%
! TAACCTACTTTGCCTTTTAG+GGG + chr7_2:66960055-66960074 None:intergenic 35.0%
AGAAATGGTATATTCGTGCT+AGG + chr7_2:66960147-66960166 None:intergenic 35.0%
GATTACCTTCCGAATATAAC+AGG - chr7_2:66960386-66960405 Msa1070630:intron 35.0%
CAATACCTGTTATATTCGGA+AGG + chr7_2:66960394-66960413 None:intergenic 35.0%
AAACTGATACAGTTTCAGCT+TGG - chr7_2:66960661-66960680 Msa1070630:intron 35.0%
TAAATAGATACTGGGGAACA+TGG - chr7_2:66960800-66960819 Msa1070630:intron 35.0%
AAATAGATACTGGGGAACAT+GGG - chr7_2:66960801-66960820 Msa1070630:intron 35.0%
! TTATTTCTTGAGCTGTTGTG+TGG - chr7_2:66960978-66960997 Msa1070630:intron 35.0%
! AACATTTTCAGCAACCCAAT+AGG + chr7_2:66961004-66961023 None:intergenic 35.0%
AGTCGAACATCAAAATCATC+AGG - chr7_2:66961089-66961108 Msa1070630:intron 35.0%
GAATCTCTATAAGTAGGGAT+TGG + chr7_2:66961303-66961322 None:intergenic 35.0%
TTCTTGTAAAAAGGATCGGA+GGG + chr7_2:66961476-66961495 None:intergenic 35.0%
TTTCTTGTAAAAAGGATCGG+AGG + chr7_2:66961477-66961496 None:intergenic 35.0%
! GATCTGGTTCAAGTTATTAG+TGG - chr7_2:66961666-66961685 Msa1070630:intron 35.0%
TGGTGACAGAAAGTTAAAAC+TGG - chr7_2:66961749-66961768 Msa1070630:intron 35.0%
TCTCACTAGCAACATTGTAT+TGG + chr7_2:66961814-66961833 None:intergenic 35.0%
TTGCTAGTGAGATGAGAAAT+AGG - chr7_2:66961822-66961841 Msa1070630:intron 35.0%
ATGGTAATTAAGGTAGGGAA+AGG + chr7_2:66962446-66962465 None:intergenic 35.0%
!! CTTCATTTTTGCTTCCTCTA+AGG + chr7_2:66962580-66962599 None:intergenic 35.0%
AACAATATAGCTACCAAGGA+AGG - chr7_2:66962684-66962703 Msa1070630:intron 35.0%
ACAATATAGCTACCAAGGAA+GGG - chr7_2:66962685-66962704 Msa1070630:intron 35.0%
TAAGTTCCTCTTAGAACCAT+GGG - chr7_2:66962941-66962960 Msa1070630:CDS 35.0%
CTGCCTAATGTATGTTATGA+TGG - chr7_2:66963156-66963175 Msa1070630:five_prime_UTR 35.0%
GAGCCATCATAACATACATT+AGG + chr7_2:66963162-66963181 None:intergenic 35.0%
AGAAACTGTGTCATCTCTCA+TGG - chr7_2:66956890-66956909 Msa1070630:three_prime_UTR 40.0%
TGAGGTATGAAGAAGATGCA+TGG + chr7_2:66956977-66956996 None:intergenic 40.0%
TCTTCATACCTCAGAAGCAA+AGG - chr7_2:66956984-66957003 Msa1070630:CDS 40.0%
CTTCATACCTCAGAAGCAAA+GGG - chr7_2:66956985-66957004 Msa1070630:CDS 40.0%
TCATCATGAACACCTTCACT+GGG + chr7_2:66957035-66957054 None:intergenic 40.0%
TTCATCATGAACACCTTCAC+TGG + chr7_2:66957036-66957055 None:intergenic 40.0%
TCTGCTGAGTTGTTTGCTTA+TGG - chr7_2:66957380-66957399 Msa1070630:intron 40.0%
TTCCAGCATACAACATTGAC+TGG + chr7_2:66957433-66957452 None:intergenic 40.0%
TCTCTTAGCTAGTATCACCA+CGG + chr7_2:66957586-66957605 None:intergenic 40.0%
TTAAGCTGAGCTTATTTCCC+AGG - chr7_2:66957675-66957694 Msa1070630:intron 40.0%
!! AAAAGTATTACTTCGGAGGG+TGG + chr7_2:66957915-66957934 None:intergenic 40.0%
! ACCCTCCGAAGTAATACTTT+TGG - chr7_2:66957914-66957933 Msa1070630:intron 40.0%
TATATACCTGACAGTACTGC+AGG - chr7_2:66958112-66958131 Msa1070630:intron 40.0%
ATATACCTGACAGTACTGCA+GGG - chr7_2:66958113-66958132 Msa1070630:intron 40.0%
ATACACAGTTGTTAGAGGGT+TGG + chr7_2:66958169-66958188 None:intergenic 40.0%
ATCTGGTAATAACCCTTGCA+TGG - chr7_2:66958199-66958218 Msa1070630:intron 40.0%
TTATTGGTGGAAGGTAGAAG+GGG - chr7_2:66958265-66958284 Msa1070630:intron 40.0%
AGTACTAACCAAGAGGTCTA+AGG + chr7_2:66958379-66958398 None:intergenic 40.0%
!! TAGAAGGAGTACTAACCAAG+AGG + chr7_2:66958386-66958405 None:intergenic 40.0%
TACTCCTTCTACTATCTAGC+TGG - chr7_2:66958395-66958414 Msa1070630:intron 40.0%
CAAACCAGCTAGATAGTAGA+AGG + chr7_2:66958402-66958421 None:intergenic 40.0%
TGGTTTGAACCTTAGTTCCT+AGG - chr7_2:66958415-66958434 Msa1070630:intron 40.0%
AGGTTCAAACCTAGGAACTA+AGG + chr7_2:66958359-66958378 None:intergenic 40.0%
AGGTAGTAAGGTTCAAACCT+AGG + chr7_2:66958435-66958454 None:intergenic 40.0%
GTTTGAACCTTACTACCTCT+TGG - chr7_2:66958437-66958456 Msa1070630:intron 40.0%
AACATGACCAAGAGGTAGTA+AGG + chr7_2:66958447-66958466 None:intergenic 40.0%
CGTCAACAAAATGTTAGGTG+AGG + chr7_2:66958487-66958506 None:intergenic 40.0%
TTCAAAGGGGTCTACCATTA+AGG + chr7_2:66958526-66958545 None:intergenic 40.0%
!! CCCTTTGAAAGCTTTGAAAG+AGG - chr7_2:66958537-66958556 Msa1070630:intron 40.0%
CCCTCTTTCAAAGCTTTCAA+AGG + chr7_2:66958541-66958560 None:intergenic 40.0%
CTTTAGTAGGTTTACATCGG+TGG + chr7_2:66958682-66958701 None:intergenic 40.0%
TGCCCTTAGTTCATAATCAC+TGG + chr7_2:66958728-66958747 None:intergenic 40.0%
CTACTTATAGTAAAGGGGGT+TGG - chr7_2:66958807-66958826 Msa1070630:intron 40.0%
! GGTTGGATTCTCTTTTGTGA+AGG - chr7_2:66958824-66958843 Msa1070630:intron 40.0%
!! TGAGAGTACTAGATTGCAAG+AGG - chr7_2:66958850-66958869 Msa1070630:intron 40.0%
CCAGCTTTCATAACTACGAA+AGG + chr7_2:66959038-66959057 None:intergenic 40.0%
CCTTTCGTAGTTATGAAAGC+TGG - chr7_2:66959035-66959054 Msa1070630:intron 40.0%
AGTACTTTCCATCCATGAAC+CGG - chr7_2:66959078-66959097 Msa1070630:intron 40.0%
CTCCAGGATGAACATAATAC+GGG - chr7_2:66959197-66959216 Msa1070630:intron 40.0%
ATCCCGTATTATGTTCATCC+TGG + chr7_2:66959202-66959221 None:intergenic 40.0%
!! GGGATCTCTGTATTTTGAGA+GGG - chr7_2:66959217-66959236 Msa1070630:intron 40.0%
CTGTTCCAGTAAGAATGAGA+AGG + chr7_2:66959410-66959429 None:intergenic 40.0%
TCTCATTCTTACTGGAACAG+TGG - chr7_2:66959410-66959429 Msa1070630:intron 40.0%
ATGATTTCTGAGCAAGGAAC+TGG + chr7_2:66960008-66960027 None:intergenic 40.0%
GTTCCTTGCTCAGAAATCAT+AGG - chr7_2:66960008-66960027 Msa1070630:intron 40.0%
ATGGTATATTCGTGCTAGGT+AGG + chr7_2:66960143-66960162 None:intergenic 40.0%
GGTAATCTCTTGTCAATGCA+AGG + chr7_2:66960373-66960392 None:intergenic 40.0%
TTTCGTAATTGAAGTCCGTC+TGG - chr7_2:66960596-66960615 Msa1070630:intron 40.0%
CACATGATAAAACAGCCAGA+CGG + chr7_2:66960614-66960633 None:intergenic 40.0%
AATAGATACTGGGGAACATG+GGG - chr7_2:66960802-66960821 Msa1070630:intron 40.0%
!! TTGTGGCTTTGATTGCGAAA+AGG + chr7_2:66961147-66961166 None:intergenic 40.0%
AGGACATGATACATCATCGA+TGG - chr7_2:66961709-66961728 Msa1070630:intron 40.0%
AGCTAGAGATGATGCATTTC+TGG - chr7_2:66962074-66962093 Msa1070630:intron 40.0%
CAAGTTAGCATGACCCATTA+AGG + chr7_2:66962283-66962302 None:intergenic 40.0%
ATTAAGGTAGGGAAAGGCTA+AGG + chr7_2:66962440-66962459 None:intergenic 40.0%
TCCAGATGCAACTCAAAGAA+AGG - chr7_2:66962546-66962565 Msa1070630:intron 40.0%
!! TCCTTTCTTTGAGTTGCATC+TGG + chr7_2:66962550-66962569 None:intergenic 40.0%
! GAAGTTGATTAAGGTCCCAA+AGG - chr7_2:66962596-66962615 Msa1070630:intron 40.0%
AGGCAACAATATAGCTACCA+AGG - chr7_2:66962680-66962699 Msa1070630:intron 40.0%
CTAAGTTCCTCTTAGAACCA+TGG - chr7_2:66962940-66962959 Msa1070630:CDS 40.0%
GATGAGAGGGTTAAATTCTG+AGG + chr7_2:66963248-66963267 None:intergenic 40.0%
CGCTTGAAGCTTCTCTTCAA+TGG - chr7_2:66956867-66956886 Msa1070630:three_prime_UTR 45.0%
AACACTTCCCTTTGCTTCTG+AGG + chr7_2:66956995-66957014 None:intergenic 45.0%
!! AGGGAAGTGTTGTAATGCTG+AGG - chr7_2:66957004-66957023 Msa1070630:CDS 45.0%
!! TTTGATGGTGATGGCTTGTC+TGG - chr7_2:66957110-66957129 Msa1070630:intron 45.0%
! TGATGGCTTGTCTGGTTTCA+GGG - chr7_2:66957118-66957137 Msa1070630:intron 45.0%
TGGTAATAACCCTTGCATGG+TGG - chr7_2:66958202-66958221 Msa1070630:intron 45.0%
!! CTCACTTTTCCACCATGCAA+GGG + chr7_2:66958214-66958233 None:intergenic 45.0%
! ACGAGGCCAGAGTTTTTCTA+TGG - chr7_2:66958295-66958314 Msa1070630:intron 45.0%
! GAGGTCTAAGGTTCAAACCT+AGG + chr7_2:66958367-66958386 None:intergenic 45.0%
GGTTTGAACCTTAGACCTCT+TGG - chr7_2:66958368-66958387 Msa1070630:intron 45.0%
TCTCCACACAGCTACCTTAA+TGG - chr7_2:66958509-66958528 Msa1070630:intron 45.0%
CTACCATTAAGGTAGCTGTG+TGG + chr7_2:66958515-66958534 None:intergenic 45.0%
AAAGAGGGCAAAGCACACAA+TGG - chr7_2:66958553-66958572 Msa1070630:intron 45.0%
TGAAAGCTGGGATCAAAGCA+AGG - chr7_2:66959048-66959067 Msa1070630:intron 45.0%
AACAAGTTCCGGTTCATGGA+TGG + chr7_2:66959089-66959108 None:intergenic 45.0%
!! CGGGATCTCTGTATTTTGAG+AGG - chr7_2:66959216-66959235 Msa1070630:intron 45.0%
TGAGAGGGATCAAACAAAGC+TGG - chr7_2:66959232-66959251 Msa1070630:intron 45.0%
TGTTTACAAGTGGCACGATG+TGG - chr7_2:66959506-66959525 Msa1070630:intron 45.0%
GTTTACAAGTGGCACGATGT+GGG - chr7_2:66959507-66959526 Msa1070630:intron 45.0%
CAGGGCTATGTTTAGTTGAG+TGG + chr7_2:66959782-66959801 None:intergenic 45.0%
GTGCCTATGATTTCTGAGCA+AGG + chr7_2:66960014-66960033 None:intergenic 45.0%
GTTCACAACACACCCCTAAA+AGG - chr7_2:66960040-66960059 Msa1070630:intron 45.0%
ACACCCCTAAAAGGCAAAGT+AGG - chr7_2:66960049-66960068 Msa1070630:intron 45.0%
ATAGATACTGGGGAACATGG+GGG - chr7_2:66960803-66960822 Msa1070630:intron 45.0%
TTGCTTAATATGCGCCCTCA+GGG + chr7_2:66962308-66962327 None:intergenic 45.0%
GAAAGGACGAAAGTCCTTAG+AGG - chr7_2:66962563-66962582 Msa1070630:intron 45.0%
TAACATTGGCAACCCTTCCT+TGG + chr7_2:66962700-66962719 None:intergenic 45.0%
GCGAGAATGTCATAGTCCTT+TGG + chr7_2:66962847-66962866 None:intergenic 45.0%
! AAGAGTTCTGACCGCGAAAA+AGG - chr7_2:66962891-66962910 Msa1070630:CDS 45.0%
! AGAGTTCTGACCGCGAAAAA+GGG - chr7_2:66962892-66962911 Msa1070630:CDS 45.0%
! AAAAGGGCACACCTGATGAA+TGG - chr7_2:66962908-66962927 Msa1070630:CDS 45.0%
AGATACTGACGCCATTCATC+AGG + chr7_2:66962922-66962941 None:intergenic 45.0%
!! GACTAACCCATGGTTCTAAG+AGG + chr7_2:66962950-66962969 None:intergenic 45.0%
!! CTTAGAACCATGGGTTAGTC+TGG - chr7_2:66962950-66962969 Msa1070630:CDS 45.0%
AAAGAGAATCGTAGCGTGTC+TGG + chr7_2:66963002-66963021 None:intergenic 45.0%
GTGAACTGTGCCATACCCTT+TGG + chr7_2:66956837-66956856 None:intergenic 50.0%
ATGGCACAGTTCACTGCACA+AGG - chr7_2:66956843-66956862 Msa1070630:three_prime_UTR 50.0%
! GTGATGGCTTGTCTGGTTTC+AGG - chr7_2:66957117-66957136 Msa1070630:intron 50.0%
! GATGGCTTGTCTGGTTTCAG+GGG - chr7_2:66957119-66957138 Msa1070630:intron 50.0%
! TGGTTTCAGGGGTCTTGTGT+TGG - chr7_2:66957130-66957149 Msa1070630:intron 50.0%
GACTGCTATCATCATGCTCC+AGG - chr7_2:66957407-66957426 Msa1070630:intron 50.0%
! GCATACAACATTGACTGGCC+TGG + chr7_2:66957428-66957447 None:intergenic 50.0%
GGCCAGTCAATGTTGTATGC+TGG - chr7_2:66957428-66957447 Msa1070630:intron 50.0%
GGACATACCCTTAAGACAGC+TGG + chr7_2:66957894-66957913 None:intergenic 50.0%
!! CCTCACTTTTCCACCATGCA+AGG + chr7_2:66958215-66958234 None:intergenic 50.0%
! CCTTGCATGGTGGAAAAGTG+AGG - chr7_2:66958212-66958231 Msa1070630:intron 50.0%
! CATCGGTGGTAGTGCTCAAA+GGG + chr7_2:66958668-66958687 None:intergenic 50.0%
! ACATCGGTGGTAGTGCTCAA+AGG + chr7_2:66958669-66958688 None:intergenic 50.0%
AAGCTGGGATCAAAGCAAGG+TGG - chr7_2:66959051-66959070 Msa1070630:intron 50.0%
ACAACCACTAGACTCTCTCC+AGG - chr7_2:66959181-66959200 Msa1070630:intron 50.0%
TCATCCTGGAGAGAGTCTAG+TGG + chr7_2:66959188-66959207 None:intergenic 50.0%
AGTGGGTGGACAATGGACAT+GGG - chr7_2:66960459-66960478 Msa1070630:intron 50.0%
TAGATACTGGGGAACATGGG+GGG - chr7_2:66960804-66960823 Msa1070630:intron 50.0%
TGAGCTGTTGTGTGGCCTAT+TGG - chr7_2:66960986-66961005 Msa1070630:intron 50.0%
GAGCTGTTGTGTGGCCTATT+GGG - chr7_2:66960987-66961006 Msa1070630:intron 50.0%
CGCAATCAAAGCCACAAGCA+TGG - chr7_2:66961150-66961169 Msa1070630:intron 50.0%
! TCATGCTAACTTGTGCCCTG+AGG - chr7_2:66962290-66962309 Msa1070630:intron 50.0%
! CATGCTAACTTGTGCCCTGA+GGG - chr7_2:66962291-66962310 Msa1070630:intron 50.0%
GTTGCTTAATATGCGCCCTC+AGG + chr7_2:66962309-66962328 None:intergenic 50.0%
AGCTGCTGCTGTTAGAGGTA+TGG + chr7_2:66962869-66962888 None:intergenic 50.0%
CTTAGAGCTGCTGCTGTTAG+AGG + chr7_2:66962874-66962893 None:intergenic 50.0%
!! ATCAGGTGTGCCCTTTTTCG+CGG + chr7_2:66962905-66962924 None:intergenic 50.0%
!! AGAACCATGGGTTAGTCTGG+TGG - chr7_2:66962953-66962972 Msa1070630:CDS 50.0%
GATGGCTCAGACCTTCTCAT+TGG - chr7_2:66963174-66963193 Msa1070630:five_prime_UTR 50.0%
AAGACTGTGAACTCCCCCAG+TGG - chr7_2:66957855-66957874 Msa1070630:intron 55.0%
GACTTCCCTGCAGTACTGTC+AGG + chr7_2:66958121-66958140 None:intergenic 55.0%
GTAGAAGGGGTAGCTTCACG+AGG - chr7_2:66958278-66958297 Msa1070630:intron 55.0%
AGCTGGCACAACGTGATCGA+TGG + chr7_2:66960437-66960456 None:intergenic 55.0%
CAGTGGGTGGACAATGGACA+TGG - chr7_2:66960458-66960477 Msa1070630:intron 55.0%
!! TTGGTGTCGTGCCATGCTTG+TGG + chr7_2:66961164-66961183 None:intergenic 55.0%
GCAACCACCAGACTAACCCA+TGG + chr7_2:66962960-66962979 None:intergenic 55.0%
TAGCGTGTCTGGCATCACAC+AGG + chr7_2:66962991-66963010 None:intergenic 55.0%
CGCACTGAGCATAGAGGCCT+GGG + chr7_2:66957695-66957714 None:intergenic 60.0%
TGCACGCGCACTGAGCATAG+AGG + chr7_2:66957701-66957720 None:intergenic 60.0%
TCACGTTGTGCCAGCTGCAG+TGG - chr7_2:66960441-66960460 Msa1070630:intron 60.0%
CACGTTGTGCCAGCTGCAGT+GGG - chr7_2:66960442-66960461 Msa1070630:intron 60.0%
CATTGTCCACCCACTGCAGC+TGG + chr7_2:66960454-66960473 None:intergenic 60.0%
CAGCTGCAGTGGGTGGACAA+TGG - chr7_2:66960452-66960471 Msa1070630:intron 60.0%
GCTGAGGCACGTCCCAGTGA+AGG - chr7_2:66957020-66957039 Msa1070630:CDS 65.0%
GCGCACTGAGCATAGAGGCC+TGG + chr7_2:66957696-66957715 None:intergenic 65.0%
GTTGTGCCAGCTGCAGTGGG+TGG - chr7_2:66960445-66960464 Msa1070630:intron 65.0%
CTGGGGAACATGGGGGGAGA+AGG - chr7_2:66960810-66960829 Msa1070630:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 66956643 66963268 66956643 ID=Msa1070630;Name=Msa1070630
chr7_2 mRNA 66956643 66963268 66956643 ID=Msa1070630-mRNA-1;Parent=Msa1070630;Name=Msa1070630-mRNA-1;_AED=0.11;_eAED=0.11;_QI=200|1|1|1|1|1|7|314|275
chr7_2 exon 66956643 66957070 66956643 ID=Msa1070630-mRNA-1:exon:14423;Parent=Msa1070630-mRNA-1
chr7_2 exon 66957294 66957377 66957294 ID=Msa1070630-mRNA-1:exon:14422;Parent=Msa1070630-mRNA-1
chr7_2 exon 66959422 66959503 66959422 ID=Msa1070630-mRNA-1:exon:14421;Parent=Msa1070630-mRNA-1
chr7_2 exon 66960190 66960284 66960190 ID=Msa1070630-mRNA-1:exon:14420;Parent=Msa1070630-mRNA-1
chr7_2 exon 66962006 66962080 66962006 ID=Msa1070630-mRNA-1:exon:14419;Parent=Msa1070630-mRNA-1
chr7_2 exon 66962428 66962482 66962428 ID=Msa1070630-mRNA-1:exon:14418;Parent=Msa1070630-mRNA-1
chr7_2 exon 66962746 66963268 66962746 ID=Msa1070630-mRNA-1:exon:14417;Parent=Msa1070630-mRNA-1
chr7_2 five_prime_UTR 66963069 66963268 66963069 ID=Msa1070630-mRNA-1:five_prime_utr;Parent=Msa1070630-mRNA-1
chr7_2 CDS 66962746 66963068 66962746 ID=Msa1070630-mRNA-1:cds;Parent=Msa1070630-mRNA-1
chr7_2 CDS 66962428 66962482 66962428 ID=Msa1070630-mRNA-1:cds;Parent=Msa1070630-mRNA-1
chr7_2 CDS 66962006 66962080 66962006 ID=Msa1070630-mRNA-1:cds;Parent=Msa1070630-mRNA-1
chr7_2 CDS 66960190 66960284 66960190 ID=Msa1070630-mRNA-1:cds;Parent=Msa1070630-mRNA-1
chr7_2 CDS 66959422 66959503 66959422 ID=Msa1070630-mRNA-1:cds;Parent=Msa1070630-mRNA-1
chr7_2 CDS 66957294 66957377 66957294 ID=Msa1070630-mRNA-1:cds;Parent=Msa1070630-mRNA-1
chr7_2 CDS 66956957 66957070 66956957 ID=Msa1070630-mRNA-1:cds;Parent=Msa1070630-mRNA-1
chr7_2 three_prime_UTR 66956643 66956956 66956643 ID=Msa1070630-mRNA-1:three_prime_utr;Parent=Msa1070630-mRNA-1
Gene Sequence

>Msa1070630

ATGGCACAGTTCACTGCACAAGGTCGCTTGAAGCTTCTCTTCAATGGAGAAACTGTGTCATCTCTCATGGTTCAGACCCACAAGAGAAGAACAAGTTACAAAGGTTCTTCTTCTTTTGCTTCTAGATTTCACCATGCATCTTCTTCATACCTCAGAAGCAAAGGGAAGTGTTGTAATGCTGAGGCACGTCCCAGTGAAGGTGTTCATGATGAATATGCATATGTTTTTGAATATGATTCTGTTGATGAGGATGATGATGATGATGTATTTGATGGTGATGGCTTGTCTGGTTTCAGGGGTCTTGTGTTGGATATATCTTACAGGCCAGTCAATGTTGTATGCTGGAAACGTGCCATTTGTTTAGAGTTTATGGAGAAGGCTGATGTACTAGAGTATTATGATAAGACTGTGAACTCCCCCAGTGGATCTTTCTATATACCAGCTGTCTTAAGGGTTCGTCATTTACTTCAGATTATTAAAAGAAGAAGAGTAGTCAAGAACAGTCTTAGTCGGAAAAATATACTGTTTAGAGACAATTACACCTGTCAGTATTGCTCTTCACATGAGAATTTGACCATCGATCACGTTGTGCCAGCTGCAGTGGGTGGACAATGGACATGGGAAAATCTAGTGACTGCTTGTTCCAGATGCAACTCAAAGAAAGGACGAAAGTCCTTAGAGGAAGCAAAAATGAAGTTGATTAAGGTCCCAAAGAAACCAAAGGACTATGACATTCTCGCCATACCTCTAACAGCAGCAGCTCTAAGAGTTCTGACCGCGAAAAAGGGCACACCTGATGAATGGCGTCAGTATCTAAGTTCCTCTTAG

Protein sequence

>Msa1070630

MAQFTAQGRLKLLFNGETVSSLMVQTHKRRTSYKGSSSFASRFHHASSSYLRSKGKCCNAEARPSEGVHDEYAYVFEYDSVDEDDDDDVFDGDGLSGFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDKTVNSPSGSFYIPAVLRVRHLLQIIKRRRVVKNSLSRKNILFRDNYTCQYCSSHENLTIDHVVPAAVGGQWTWENLVTACSRCNSKKGRKSLEEAKMKLIKVPKKPKDYDILAIPLTAAALRVLTAKKGTPDEWRQYLSSS*