AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0009290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009290 MtrunA17_Chr1g0157841 89.368 348 5 2 1 333 1 331 0.0 603
Msa0009290 MtrunA17_Chr7g0256311 34.286 210 117 6 104 312 113 302 1.30e-28 116
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009290 AT5G53460.1 60.784 306 84 4 30 314 40 330 5.11e-117 372
Msa0009290 AT5G53460.2 60.784 306 84 4 30 314 40 330 5.11e-117 372
Msa0009290 AT5G53460.3 60.784 306 84 4 30 314 40 330 5.11e-117 372
Msa0009290 AT5G04140.1 37.619 210 110 6 104 312 123 312 3.85e-33 130
Msa0009290 AT5G04140.2 37.264 212 112 6 104 314 149 340 4.12e-33 130
Msa0009290 AT2G41220.1 33.466 251 131 6 80 314 86 316 8.45e-33 129

Find 678 sgRNAs with CRISPR-Local

Find 1000 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGCTCCATTGAAAGCTTT+TGG 0.154690 1_1:+13565008 Msa0009290:three_prime_UTR
TGCAGATCAGCTAAATAAAA+TGG 0.174348 1_1:+13570234 Msa0009290:three_prime_UTR
AACCATGAAAACTCATAATT+TGG 0.175864 1_1:+13563597 Msa0009290:three_prime_UTR
CCTTGATTACTATTTGATTT+TGG 0.177339 1_1:+13563321 Msa0009290:three_prime_UTR
CTGCTTAATGGCACTCCTTT+TGG 0.188152 1_1:-13566836 None:intergenic
CCATTTCCTTAGTGGATAAA+AGG 0.192108 1_1:-13565402 None:intergenic
TTTCTCCGACTATCGGATTT+AGG 0.195223 1_1:-13562038 None:intergenic
GCCAATTAAGATGTTGTCTT+TGG 0.211081 1_1:-13568477 None:intergenic
CAAATTTAGTTTCCGCTTCT+TGG 0.214559 1_1:-13570982 None:intergenic
TTCTCTTTCGTTAACGTTTA+CGG 0.224352 1_1:+13559981 Msa0009290:CDS
CCCACTAGCAACCTGCTTAA+TGG 0.226015 1_1:-13566848 None:intergenic
TTATTATGTGCACTTGCTTT+AGG 0.230389 1_1:-13571799 None:intergenic
TTCTGCACACTTGTTGGTTT+TGG 0.232363 1_1:+13565818 Msa0009290:three_prime_UTR
CCTTGCACCTCTTCAGTTAC+TGG 0.239694 1_1:-13563241 None:intergenic
CCCAAAGACAACATCTTAAT+TGG 0.246336 1_1:+13568476 Msa0009290:three_prime_UTR
TGTTGTTCATAGTTCTTATT+TGG 0.246693 1_1:+13571982 Msa0009290:three_prime_UTR
ATTGCCTCTACAGCCAAATA+TGG 0.254501 1_1:-13565857 None:intergenic
TGATGTGGATATGGAAAATA+TGG 0.254579 1_1:+13564971 Msa0009290:three_prime_UTR
ACTTGCAGATGTACATATTA+AGG 0.260289 1_1:+13562853 Msa0009290:intron
TTCTGACTCAAAAGTTGATT+TGG 0.262389 1_1:+13562619 Msa0009290:CDS
TTTGCTTGATAGCAATTTAC+AGG 0.265743 1_1:+13570676 Msa0009290:three_prime_UTR
CAAGAAGCGGAAACTAAATT+TGG 0.266628 1_1:+13570983 Msa0009290:three_prime_UTR
CCTTTCCTACACACATCTTC+TGG 0.269264 1_1:-13564654 None:intergenic
TTATGGGAATCCGGTGGATT+AGG 0.271999 1_1:+13560156 Msa0009290:CDS
GGCCTGCACTACCAGTAAAT+TGG 0.275545 1_1:-13568325 None:intergenic
TGCACTGGGGCTATGAGTTA+TGG 0.278320 1_1:+13566460 Msa0009290:three_prime_UTR
CTATCACTGGTTCGGTCAGC+TGG 0.280253 1_1:-13562574 None:intergenic
ATAAAATTTCAGGAAAATTC+TGG 0.281055 1_1:+13569725 Msa0009290:intron
ATTTGGCTGTAGAGGCAATT+TGG 0.283779 1_1:+13565861 Msa0009290:three_prime_UTR
GGGTCAAAATTGCTTCCTTT+TGG 0.285019 1_1:-13568455 None:intergenic
GGGAACACCTTGACAAATTT+AGG 0.286080 1_1:-13568881 None:intergenic
CAATGGGTTTGCCTTGTTAC+AGG 0.286331 1_1:+13561959 Msa0009290:CDS
CGCATATTCCGTGTTGATTA+TGG 0.287361 1_1:+13570956 Msa0009290:three_prime_UTR
TTGTCGTTCTGCCACGCTTC+AGG 0.288223 1_1:-13564338 None:intergenic
GGTGGGACCGTTGTTGTTCT+TGG 0.289416 1_1:+13568635 Msa0009290:three_prime_UTR
TCTCTTGGTCACAAGGTTCT+TGG 0.299950 1_1:+13562506 Msa0009290:CDS
TTGCTGCATCTTTAAACTTC+AGG 0.300006 1_1:-13566384 None:intergenic
ATCATCATCATAACAGCTTC+TGG 0.303211 1_1:-13564314 None:intergenic
ATTGCTAGTGGAGTTGTTAA+AGG 0.303582 1_1:+13567537 Msa0009290:three_prime_UTR
GTGAGTACCTCATATGTTCT+AGG 0.303634 1_1:-13571013 None:intergenic
CACTACCAGTAAATTGGATA+TGG 0.304710 1_1:-13568319 None:intergenic
TTTGGAGAGGATTCAGTTAT+GGG 0.305688 1_1:+13560140 Msa0009290:CDS
CCAATTAAGATGTTGTCTTT+GGG 0.306253 1_1:-13568476 None:intergenic
GCAACGGCAATGAACAAAAT+TGG 0.307455 1_1:+13566514 Msa0009290:three_prime_UTR
GTGGCCATAGCCGCCCTTCT+TGG 0.309177 1_1:+13567747 Msa0009290:three_prime_UTR
GGAGGAAGAAGATGAGTTAA+TGG 0.310123 1_1:-13563182 None:intergenic
CTTCCTGGCCACAAGGTTAT+AGG 0.317962 1_1:+13567245 Msa0009290:three_prime_UTR
TCAAACTTCAAGGCTGATTA+TGG 0.318530 1_1:+13571522 Msa0009290:three_prime_UTR
ATGAGCTAGTGTATCAAAAT+AGG 0.323484 1_1:+13569780 Msa0009290:three_prime_UTR
TGTTGCTGTGAGCTCTCTTT+TGG 0.324252 1_1:+13565700 Msa0009290:three_prime_UTR
TGCTCAGATATTTGAAGCTC+TGG 0.324444 1_1:+13566036 Msa0009290:three_prime_UTR
GATGAAAATGGAGTTGTTAA+AGG 0.325380 1_1:+13571052 Msa0009290:three_prime_UTR
ACCAATACCGTGGTCTTCTT+TGG 0.327204 1_1:-13571667 None:intergenic
ACACAGTATTGGGCAGCTTC+TGG 0.328427 1_1:-13568104 None:intergenic
GCAGGTTCAACTTCACTAAT+AGG 0.333334 1_1:-13566415 None:intergenic
AACTGAAGAGGTGCAAGGTT+GGG 0.334206 1_1:+13563246 Msa0009290:three_prime_UTR
GCCCTGGTTGGTGGTGGCTG+AGG 0.335345 1_1:-13570824 None:intergenic
TACATTGGTAAAGGATTATC+AGG 0.335391 1_1:+13568410 Msa0009290:three_prime_UTR
GGGGTCAGTCACTGGTGGTA+TGG 0.336042 1_1:+13571595 Msa0009290:three_prime_UTR
GCTCAGCAGATTCGACCATT+AGG 0.340089 1_1:-13565778 None:intergenic
TTTATAGATTGTGTCTATCT+TGG 0.342749 1_1:+13572233 Msa0009290:three_prime_UTR
GCACTGGGGCTATGAGTTAT+GGG 0.343185 1_1:+13566461 Msa0009290:three_prime_UTR
TATGGGAATTCAAGGTTTGC+TGG 0.344624 1_1:+13564989 Msa0009290:three_prime_UTR
CACCATTTCTGCACACTTGT+TGG 0.345270 1_1:+13565812 Msa0009290:three_prime_UTR
TCAATTGATTCATGATCTTA+AGG 0.345719 1_1:+13567358 Msa0009290:three_prime_UTR
TCATGGTTTGGACATGGCTT+TGG 0.346386 1_1:+13568139 Msa0009290:three_prime_UTR
TTGTGGGAGTATAGAGTTAG+TGG 0.346534 1_1:-13563203 None:intergenic
AAGAAGGTTGTGGTCATTGG+CGG 0.346799 1_1:+13570725 Msa0009290:three_prime_UTR
CTGCTCCACTGCATCTTTAG+AGG 0.348077 1_1:-13568948 None:intergenic
TGCTTCTACACTGTTAGTTC+TGG 0.352002 1_1:-13566302 None:intergenic
GCTACTGCTTCTGCACTTCC+AGG 0.352044 1_1:-13566190 None:intergenic
TGCCACCGCCTTTCACTAAA+AGG 0.355391 1_1:+13565376 Msa0009290:three_prime_UTR
GGCTATGGCCACATCTCTTC+CGG 0.356838 1_1:-13567736 None:intergenic
GATGGCTTCCATTTCCTTAG+TGG 0.357094 1_1:-13565410 None:intergenic
TTTAAAATACTTACCGCCTC+GGG 0.359212 1_1:-13571199 None:intergenic
TATATAGGTAACTGATGCTT+TGG 0.359290 1_1:+13560612 Msa0009290:intron
GTCTAATGATGATGTGGATA+TGG 0.359669 1_1:+13564962 Msa0009290:three_prime_UTR
GCTGGACTGCCTTGGGAACT+TGG 0.359908 1_1:+13567633 Msa0009290:three_prime_UTR
TGGAAATCAAATGTACAGTT+TGG 0.362148 1_1:+13572043 Msa0009290:three_prime_UTR
CTGTCGGCGGGGTCAGTCAC+TGG 0.363500 1_1:+13571587 Msa0009290:three_prime_UTR
CCACAGTGGACGGGTTATAA+TGG 0.363901 1_1:+13564602 Msa0009290:three_prime_UTR
TTGCCTGAGGCCCTGGTTGG+TGG 0.363981 1_1:-13570833 None:intergenic
TTCGTGTATTGGGCCACAAC+GGG 0.364676 1_1:+13563690 Msa0009290:three_prime_UTR
TTGAAATCACCACTTGCTTT+TGG 0.365454 1_1:-13565911 None:intergenic
AAAAGTTGATTTGGAGAAAC+AGG 0.365852 1_1:+13562628 Msa0009290:CDS
TCTACTTTGGCCTCATATAA+AGG 0.366977 1_1:+13566013 Msa0009290:three_prime_UTR
CTTCTTGGTGCAGAAGAGTA+TGG 0.367328 1_1:+13567762 Msa0009290:three_prime_UTR
GGTGAAGGAGGTGAACTTCC+TGG 0.367435 1_1:+13567230 Msa0009290:three_prime_UTR
GCGTGAGGGTGTTCAGTATA+GGG 0.367484 1_1:+13569500 Msa0009290:three_prime_UTR
GTACTTAGAGAGAAATTTGC+TGG 0.368472 1_1:+13567879 Msa0009290:three_prime_UTR
CCATGGGTTGCCTGAGGCCC+TGG 0.368854 1_1:-13570840 None:intergenic
AAATCCAGGCATGATGCTTC+TGG 0.369895 1_1:+13564683 Msa0009290:three_prime_UTR
GTTCAATTCATGAATGGTCT+TGG 0.372431 1_1:-13566338 None:intergenic
CAGGTTGCTAGTGGGAGATT+TGG 0.373042 1_1:+13566856 Msa0009290:three_prime_UTR
GTGACCTGACTTGGCCTCTT+GGG 0.374110 1_1:-13569441 None:intergenic
ACCCTTGTTCTTTCTGATAG+AGG 0.375042 1_1:+13565571 Msa0009290:three_prime_UTR
TGATGCTATATGCCCATATT+TGG 0.375511 1_1:+13565844 Msa0009290:three_prime_UTR
CCACGGTATTGGTGGGAATC+AGG 0.375799 1_1:+13571677 Msa0009290:three_prime_UTR
AAGAGGACATTATTACTCTT+AGG 0.376272 1_1:+13568780 Msa0009290:three_prime_UTR
GTGGAGAGGAAGAGATGGTT+AGG 0.378121 1_1:+13560093 Msa0009290:CDS
AGGTTTGTGGGAGATGAAAA+TGG 0.378240 1_1:+13571040 Msa0009290:three_prime_UTR
GGTTTCTGTCAGATCACCTT+CGG 0.379727 1_1:-13565341 None:intergenic
GACGCAAATTCATCAGATTC+AGG 0.380779 1_1:+13564159 Msa0009290:three_prime_UTR
TGCAGCCGGGGACTGTCGGC+GGG 0.381366 1_1:+13571575 Msa0009290:three_prime_UTR
TACTGGAGGCACTCCTGATA+TGG 0.384056 1_1:-13564856 None:intergenic
CGACCTCCTGTCAAGAGAAC+TGG 0.384778 1_1:+13569983 Msa0009290:three_prime_UTR
GTCCAATGCTGCTTTGGAAA+AGG 0.384855 1_1:+13568181 Msa0009290:three_prime_UTR
CAATCATTCAGGCGAACATT+AGG 0.385282 1_1:-13569525 None:intergenic
TATGGGAATCCGGTGGATTA+GGG 0.385456 1_1:+13560157 Msa0009290:CDS
TTCACACTAATTCGAGCAGC+TGG 0.387598 1_1:-13567486 None:intergenic
ACCATCCATATCCAATTTAC+TGG 0.387933 1_1:+13568314 Msa0009290:three_prime_UTR
GTTTGGAGAGGATTCAGTTA+TGG 0.388000 1_1:+13560139 Msa0009290:CDS
AACCAACAAGTGTGCAGAAA+TGG 0.388445 1_1:-13565814 None:intergenic
GGAAAGTATTTGTAGAGAAT+CGG 0.391323 1_1:-13563643 None:intergenic
GAATATTATTATGCAGATCT+TGG 0.391965 1_1:+13563115 Msa0009290:CDS
CTATTAGACATGACAGCTAA+TGG 0.392132 1_1:-13565208 None:intergenic
TGTGAAGGTTCTTGTGTCCT+TGG 0.392788 1_1:+13569878 Msa0009290:three_prime_UTR
AGCATCTTTCTCCACTGCTT+GGG 0.397420 1_1:-13569005 None:intergenic
CGCTTCTCTACCAGTGTTGA+CGG 0.397601 1_1:+13571546 Msa0009290:three_prime_UTR
GTTGATAAAGAAGTTGTTAA+GGG 0.400407 1_1:+13568020 Msa0009290:three_prime_UTR
ACTCCTGATAGCTCCCTTCC+AGG 0.402054 1_1:-13570614 None:intergenic
CCGTTCTTATTTCGCCCATT+CGG 0.403944 1_1:-13571879 None:intergenic
GAAAATTCTGGATGTCCTCT+TGG 0.404129 1_1:+13569737 Msa0009290:three_prime_UTR
ATGCCCACCTGATGACAAAA+TGG 0.404537 1_1:-13569624 None:intergenic
GTTGTTGTTCTTGGGAAAAC+TGG 0.404691 1_1:+13568644 Msa0009290:three_prime_UTR
ATATCTGTTCACTTTCATCT+AGG 0.404889 1_1:+13562940 Msa0009290:CDS
ATGGAAAATATGGGAATTCA+AGG 0.406163 1_1:+13564981 Msa0009290:three_prime_UTR
GGTTGTTCCTATGCTGTTTG+TGG 0.406617 1_1:-13563220 None:intergenic
TCACCTCACTCCAATCATTC+AGG 0.406633 1_1:-13569536 None:intergenic
TAGGTATTCTGTAGAATCAT+TGG 0.406779 1_1:+13565120 Msa0009290:intron
GTTTAAAGATGCAGCAAGTA+AGG 0.406871 1_1:+13566390 Msa0009290:three_prime_UTR
ATCGGTGTTTCAATGTATAC+TGG 0.407813 1_1:-13568209 None:intergenic
CTAATGTTCGCCTGAATGAT+TGG 0.407819 1_1:+13569526 Msa0009290:three_prime_UTR
CCCTGGTTGGTGGTGGCTGA+GGG 0.408644 1_1:-13570823 None:intergenic
CTTAAGGTTGCCGAGTCTCT+TGG 0.409270 1_1:+13562491 Msa0009290:intron
TTACTAGCCATGGGATTCCT+TGG 0.411016 1_1:+13571175 Msa0009290:three_prime_UTR
CAACCTGGAGCTTGTAGATC+TGG 0.411983 1_1:+13568742 Msa0009290:three_prime_UTR
GCTCCAGGTTGCACCGAGAC+TGG 0.412711 1_1:-13568730 None:intergenic
TGCAGGGATCTTCCTGTGCC+TGG 0.412741 1_1:+13570596 Msa0009290:intron
TGGGAAGGCTAGCTTAGTTA+TGG 0.414017 1_1:+13572015 Msa0009290:three_prime_UTR
CTACAAATACTTTCCCTAGC+TGG 0.416004 1_1:+13563651 Msa0009290:three_prime_UTR
GTTTGCCTTGTTACAGGTTG+TGG 0.416582 1_1:+13561965 Msa0009290:CDS
TTGAAGTGGTACGTGTTCGC+TGG 0.417175 1_1:+13571077 Msa0009290:three_prime_UTR
GTGATCGAAAAGTGCTTTGC+TGG 0.417305 1_1:+13566073 Msa0009290:three_prime_UTR
GGCAAGAAGGTTGTGGTCAT+TGG 0.417358 1_1:+13570722 Msa0009290:three_prime_UTR
CATTTCCTTAGTGGATAAAA+GGG 0.417497 1_1:-13565401 None:intergenic
TATATTTCTGCATTGTGCTT+AGG 0.417589 1_1:+13572183 Msa0009290:three_prime_UTR
CCAGACTATTGCAGAAAAGT+TGG 0.418364 1_1:+13571479 Msa0009290:intron
AAGTCTGTCCAATGCTGCTT+TGG 0.418382 1_1:+13568175 Msa0009290:three_prime_UTR
GAAAGTATTTGTAGAGAATC+GGG 0.418960 1_1:-13563642 None:intergenic
GGGGCTCAGGCTGTAGTTGA+AGG 0.419374 1_1:+13568581 Msa0009290:three_prime_UTR
TCAAGTTCCAATGTGATTCC+AGG 0.419608 1_1:-13568371 None:intergenic
TGGCAAGACCCTACGGAGAT+TGG 0.419976 1_1:+13564763 Msa0009290:three_prime_UTR
TAGTATCTGAAGCAGGAGTT+GGG 0.421236 1_1:+13567511 Msa0009290:three_prime_UTR
AGTGACCTGACTTGGCCTCT+TGG 0.422902 1_1:-13569442 None:intergenic
AAGATAAATAATTTAGTGTA+AGG 0.423747 1_1:+13571910 Msa0009290:three_prime_UTR
ATACTTGTGGCTTTGCCTCA+TGG 0.423790 1_1:+13560703 Msa0009290:CDS
GTGCCTGGAAGGGAGCTATC+AGG 0.425349 1_1:+13570611 Msa0009290:three_prime_UTR
GGGTCAGTCACTGGTGGTAT+GGG 0.425491 1_1:+13571596 Msa0009290:three_prime_UTR
ATTGGCAATGTGGCACTGTA+TGG 0.425949 1_1:+13568494 Msa0009290:three_prime_UTR
GTTGTTCCTATGCTGTTTGT+GGG 0.426363 1_1:-13563219 None:intergenic
CAATGATAATCTCCAGGGTT+TGG 0.427579 1_1:-13566217 None:intergenic
GCAAATTTCTCTCTAAGTAC+TGG 0.427878 1_1:-13567876 None:intergenic
GGGATCTTCCTGTGCCTGGA+AGG 0.430902 1_1:+13570600 Msa0009290:intron
GAAGTTCATCAGCATTTGTA+AGG 0.431463 1_1:-13566894 None:intergenic
TCCAATGCTGCTTTGGAAAA+GGG 0.432801 1_1:+13568182 Msa0009290:three_prime_UTR
CTGCTAGTGAAATTGTTAAA+CGG 0.433227 1_1:+13566434 Msa0009290:three_prime_UTR
GTTACCGATGGTCACTATCT+TGG 0.434644 1_1:+13564531 Msa0009290:intron
CCGATGCTTTCTAGTTGGTC+TGG 0.434700 1_1:+13563419 Msa0009290:three_prime_UTR
GGTCATTAGCAACCAATGTT+TGG 0.435657 1_1:-13567671 None:intergenic
CTCTAAAGATGCAGTGGAGC+AGG 0.435756 1_1:+13568949 Msa0009290:three_prime_UTR
AAAATCAACAAGCACTTCCT+TGG 0.438261 1_1:-13568846 None:intergenic
TCAAAGGAACGTGGTAAGAA+AGG 0.438669 1_1:+13565484 Msa0009290:three_prime_UTR
AAAGGAATGCACCAAAGCTT+TGG 0.439646 1_1:-13568346 None:intergenic
CAAACCCTGGAGATTATCAT+TGG 0.440206 1_1:+13566218 Msa0009290:three_prime_UTR
AGTTGATAAAGAAGTTGTTA+AGG 0.440277 1_1:+13568019 Msa0009290:three_prime_UTR
TTTGGTGCATTCCTTTGTCC+TGG 0.440499 1_1:+13568353 Msa0009290:three_prime_UTR
CAAAGTAGATATTCCCATCT+TGG 0.441705 1_1:-13565999 None:intergenic
TGCACCAAGAAGGGCGGCTA+TGG 0.442161 1_1:-13567751 None:intergenic
GTCGAAGCACTTGGTTCAAT+GGG 0.443135 1_1:+13565175 Msa0009290:three_prime_UTR
GCTTTCCTTTCTCCGACTAT+CGG 0.443212 1_1:-13562045 None:intergenic
AGAAGGTTGTGGTCATTGGC+GGG 0.443581 1_1:+13570726 Msa0009290:three_prime_UTR
TATTTGCAGCCGGGGACTGT+CGG 0.443681 1_1:+13571571 Msa0009290:three_prime_UTR
AAGCATCTTTCTCCACTGCT+TGG 0.444586 1_1:-13569006 None:intergenic
TAAAGTCCCATCGGTTTATC+CGG 0.444767 1_1:-13560228 None:intergenic
GTGGGACCGTTGTTGTTCTT+GGG 0.444965 1_1:+13568636 Msa0009290:three_prime_UTR
AAAGAGTGCTGGACTGCCTT+GGG 0.445336 1_1:+13567626 Msa0009290:three_prime_UTR
ACTGCCTTGGGAACTTGGTC+TGG 0.446078 1_1:+13567638 Msa0009290:three_prime_UTR
GTTTCAATTTAAAGAAATTG+AGG 0.446142 1_1:+13571120 Msa0009290:three_prime_UTR
CCTGAGGCCCTGGTTGGTGG+TGG 0.446739 1_1:-13570830 None:intergenic
ATTGTTGGAAGTGGACCATC+AGG 0.447208 1_1:+13570202 Msa0009290:three_prime_UTR
TTTCTCCAATGATAATCTCC+AGG 0.447277 1_1:-13566223 None:intergenic
TGTCGAAGCACTTGGTTCAA+TGG 0.447305 1_1:+13565174 Msa0009290:three_prime_UTR
GTTATAATGGCAAGTGAAGT+TGG 0.447419 1_1:+13564615 Msa0009290:three_prime_UTR
CTCAGCAGATTCGACCATTA+GGG 0.447719 1_1:-13565777 None:intergenic
AACGGACGCAAACGAGCGTT+AGG 0.448448 1_1:-13560039 None:intergenic
CGCTGGGAGAAAGATGAAAC+TGG 0.449133 1_1:+13571094 Msa0009290:three_prime_UTR
TACACTAGCTCATTAAATTC+CGG 0.450481 1_1:-13569770 None:intergenic
ATTGCGAAGTGGTGGTGGTT+TGG 0.450671 1_1:+13560122 Msa0009290:CDS
GGCTCCCAAGAGGCCAAGTC+AGG 0.450685 1_1:+13569437 Msa0009290:intron
CACTCAGGGGCAATGTGAAC+TGG 0.451149 1_1:+13563723 Msa0009290:three_prime_UTR
CCACCACCAACCAGGGCCTC+AGG 0.452213 1_1:+13570830 Msa0009290:three_prime_UTR
CTCTGATGGAGCCATGGGAT+GGG 0.453548 1_1:+13564405 Msa0009290:three_prime_UTR
GCTTCTCTACCAGTGTTGAC+GGG 0.455204 1_1:+13571547 Msa0009290:three_prime_UTR
ATTGTGCCACCAACCATATC+AGG 0.455799 1_1:+13564843 Msa0009290:three_prime_UTR
GAGGAAGAAGATGAGTTAAT+GGG 0.455938 1_1:-13563181 None:intergenic
CTCAGGCAACCCATGGCCTC+AGG 0.456091 1_1:+13570847 Msa0009290:three_prime_UTR
GCTGAGCATGTCTTGATCTC+AGG 0.456352 1_1:+13567564 Msa0009290:three_prime_UTR
GTTGAAGGTGTTGGTGATCA+TGG 0.456499 1_1:+13568596 Msa0009290:three_prime_UTR
GGAGATTATCATTGGAGAAA+AGG 0.457075 1_1:+13566226 Msa0009290:three_prime_UTR
AACAACTTTCCTGAGTTCAC+TGG 0.459430 1_1:+13569836 Msa0009290:three_prime_UTR
CAAGATGGGAATATCTACTT+TGG 0.460049 1_1:+13566000 Msa0009290:three_prime_UTR
TCTGGCCGCAGTTCAGCTGC+AGG 0.464146 1_1:-13568086 None:intergenic
AATAATCACTTTGGTGAAAG+TGG 0.464706 1_1:+13563470 Msa0009290:three_prime_UTR
GTTTGCTGTGCTTCTTGTTG+AGG 0.465767 1_1:-13571725 None:intergenic
CGTGGTGAGGCATATTTCAA+TGG 0.466236 1_1:+13568524 Msa0009290:three_prime_UTR
CATAAAATGCTTTACGCTGA+GGG 0.468300 1_1:-13564370 None:intergenic
TTCTGCCGATGCTTTCTAGT+TGG 0.469171 1_1:+13563414 Msa0009290:three_prime_UTR
CTACTGAAATGCAAGGAACT+TGG 0.469366 1_1:+13564096 Msa0009290:three_prime_UTR
TAAAGAGTGCTGGACTGCCT+TGG 0.469707 1_1:+13567625 Msa0009290:three_prime_UTR
GGTAGTGCAGGCCAAAGCTT+TGG 0.470034 1_1:+13568335 Msa0009290:three_prime_UTR
AGTCACTTCTATGCGATGTA+TGG 0.470768 1_1:+13565312 Msa0009290:three_prime_UTR
GATGAATTTGCGTCCACAAT+CGG 0.470822 1_1:-13564150 None:intergenic
CTCGTTTGCGTCCGTTAGCG+AGG 0.471033 1_1:+13560046 Msa0009290:CDS
CACTTGTTCTATCACTGGTT+CGG 0.471374 1_1:-13562582 None:intergenic
TATTTCAAAGCAAGCACCTA+TGG 0.471485 1_1:+13565959 Msa0009290:three_prime_UTR
CCAAAATCAAATAGTAATCA+AGG 0.473115 1_1:-13563321 None:intergenic
TCAAATCTAACCTGAGGCCA+TGG 0.473122 1_1:-13570857 None:intergenic
GTTGACGGGGTATTTGCAGC+CGG 0.473862 1_1:+13571561 Msa0009290:three_prime_UTR
TTGGTCACAAGGTTCTTGGT+TGG 0.476280 1_1:+13562510 Msa0009290:CDS
TCCCTCAGCCACCACCAACC+AGG 0.477185 1_1:+13570822 Msa0009290:three_prime_UTR
GTTTGCCCTGCACCTTGTGA+AGG 0.477229 1_1:+13569863 Msa0009290:three_prime_UTR
TACTTACCGCCTCGGGGCCA+AGG 0.477417 1_1:-13571192 None:intergenic
TACAAATACTTTCCCTAGCT+GGG 0.478749 1_1:+13563652 Msa0009290:three_prime_UTR
ACTCTTTATACCAGTCCATC+TGG 0.478779 1_1:-13567610 None:intergenic
GTTTAGAACAGTCAATGAAA+TGG 0.478933 1_1:+13567974 Msa0009290:three_prime_UTR
ATGCTTTGGAGATGTTGGTT+AGG 0.479411 1_1:+13560626 Msa0009290:CDS
GTTTCTGTCAGATCACCTTC+GGG 0.479420 1_1:-13565340 None:intergenic
TAAGTTTGACAAACCTGTGT+TGG 0.479433 1_1:-13566545 None:intergenic
GACTGTTCTAAACCCAAGTT+GGG 0.479828 1_1:-13567964 None:intergenic
AAAATTCTGGATGTCCTCTT+GGG 0.480350 1_1:+13569738 Msa0009290:three_prime_UTR
TGTGTTCAAAAGCAAGATCA+TGG 0.480454 1_1:+13568122 Msa0009290:three_prime_UTR
ATCCAATTTACTGGTAGTGC+AGG 0.481351 1_1:+13568323 Msa0009290:three_prime_UTR
GGAATCACATTGGAACTTGA+AGG 0.482470 1_1:+13568374 Msa0009290:three_prime_UTR
TTGGAACTCCATACATCATA+AGG 0.482615 1_1:-13570300 None:intergenic
AGTCGTTCAAGAGAGTATAA+AGG 0.483363 1_1:-13570421 None:intergenic
TTGACGGGGTATTTGCAGCC+GGG 0.484025 1_1:+13571562 Msa0009290:three_prime_UTR
AACTGATGCTTTGGAGATGT+TGG 0.484871 1_1:+13560621 Msa0009290:CDS
ACTGCTCCCCTCATTACTCT+TGG 0.485256 1_1:+13567792 Msa0009290:three_prime_UTR
ACGAAATTGCGAAGTGGTGG+TGG 0.486209 1_1:+13560117 Msa0009290:CDS
TGAATACTATTCAGCTCTGA+TGG 0.486224 1_1:+13564391 Msa0009290:three_prime_UTR
TGCACTTCATCTGCATGAGT+TGG 0.487893 1_1:+13566144 Msa0009290:three_prime_UTR
AAGCAAAAGTATATTTACTA+AGG 0.488164 1_1:+13562064 Msa0009290:CDS
GATGAAGGTTCTTGCCAAGA+TGG 0.488437 1_1:+13565985 Msa0009290:three_prime_UTR
AGGATTCAGTTATGGGAATC+CGG 0.489427 1_1:+13560147 Msa0009290:CDS
CCCACAGATAACACAGGGTT+GGG 0.490148 1_1:+13562542 Msa0009290:CDS
CAATTTCTTCAGAGTTGTGA+AGG 0.490166 1_1:+13563446 Msa0009290:three_prime_UTR
GCCCAATACACGAAAAGGTT+GGG 0.490413 1_1:-13563681 None:intergenic
ACTGAAGAGGTGCAAGGTTG+GGG 0.490897 1_1:+13563247 Msa0009290:three_prime_UTR
CGTTTAACAATTTCACTAGC+AGG 0.490908 1_1:-13566433 None:intergenic
GAGTTATGGGTCAATATCAT+TGG 0.491176 1_1:+13566474 Msa0009290:three_prime_UTR
ACCAAAGAAGACCACGGTAT+TGG 0.491279 1_1:+13571666 Msa0009290:three_prime_UTR
GCTCTGATGGAGCCATGGGA+TGG 0.492601 1_1:+13564404 Msa0009290:three_prime_UTR
GACCACAACCTTCTTGCCCT+TGG 0.493015 1_1:-13570717 None:intergenic
AGCCTTGTTCAATTCATGAA+TGG 0.493678 1_1:-13566344 None:intergenic
CAGACTATTGCAGAAAAGTT+GGG 0.493721 1_1:+13571480 Msa0009290:intron
TGACTGTTCTAAACCCAAGT+TGG 0.493848 1_1:-13567965 None:intergenic
GAAGGTTGTGGTCATTGGCG+GGG 0.494525 1_1:+13570727 Msa0009290:three_prime_UTR
GCAGATCAGCTAAATAAAAT+GGG 0.494643 1_1:+13570235 Msa0009290:three_prime_UTR
GCGCACAAGAGTTGCCCTAA+TGG 0.495246 1_1:+13565763 Msa0009290:three_prime_UTR
AATTGAATAAATATCGTGAT+GGG 0.495433 1_1:-13567324 None:intergenic
TCAAAAGCAAGATCATGGTT+TGG 0.497321 1_1:+13568127 Msa0009290:three_prime_UTR
AGGAAAGCAAGAGGTTGTCT+TGG 0.498191 1_1:+13571930 Msa0009290:three_prime_UTR
TGATTGGAGTGAGGTGATGA+TGG 0.498649 1_1:+13569542 Msa0009290:three_prime_UTR
AACACAGTCTGCCCGTTGCA+TGG 0.498940 1_1:+13569590 Msa0009290:three_prime_UTR
CAAAGGAACGTGGTAAGAAA+GGG 0.499606 1_1:+13565485 Msa0009290:three_prime_UTR
AGAGTAGCCATTGTTGGAAG+TGG 0.499964 1_1:+13570193 Msa0009290:three_prime_UTR
TTTCAATTTAAAGAAATTGA+GGG 0.501153 1_1:+13571121 Msa0009290:three_prime_UTR
TCAGGTCATGATGGAGGTAC+AGG 0.501635 1_1:+13567582 Msa0009290:three_prime_UTR
CTTAAAAGAGCAATACTCAT+TGG 0.503023 1_1:+13564743 Msa0009290:three_prime_UTR
GGTTGGAGGAAGCGTTAGAC+AGG 0.503445 1_1:+13565506 Msa0009290:three_prime_UTR
CTAGTATCTGAAGCAGGAGT+TGG 0.504438 1_1:+13567510 Msa0009290:three_prime_UTR
GTACTCACTAAGAGGTTTGT+GGG 0.505606 1_1:+13571028 Msa0009290:three_prime_UTR
GGAAGTTCACCTCCTTCACC+AGG 0.507904 1_1:-13567227 None:intergenic
GTTGTAGTATATCCTCCAAA+AGG 0.508015 1_1:+13568440 Msa0009290:three_prime_UTR
TTGTGGCCCAATACACGAAA+AGG 0.508407 1_1:-13563686 None:intergenic
TGGAGAGGAAGAGATGGTTA+GGG 0.509283 1_1:+13560094 Msa0009290:CDS
TGTGCGTAATTCTGGGGCTC+AGG 0.510069 1_1:+13568568 Msa0009290:three_prime_UTR
GGGTTGCCTGAGGCCCTGGT+TGG 0.510440 1_1:-13570836 None:intergenic
TGCCGTTGCTAATGCTGTGT+GGG 0.511339 1_1:-13566500 None:intergenic
CCTTTGTCCTGGAATCACAT+TGG 0.511420 1_1:+13568364 Msa0009290:three_prime_UTR
ATTGGTGGCCTTATGATGTA+TGG 0.511977 1_1:+13570292 Msa0009290:three_prime_UTR
TGGACTGGTATAAAGAGTGC+TGG 0.512605 1_1:+13567615 Msa0009290:three_prime_UTR
ACAGCATCAGTGACCTGACT+TGG 0.512707 1_1:-13569450 None:intergenic
AAGAAGTTAATAACGTGCTC+AGG 0.512816 1_1:-13567906 None:intergenic
TTGCCTCTACAGCCAAATAT+GGG 0.512888 1_1:-13565856 None:intergenic
ACTAAGAGGTACAATTTAGC+TGG 0.513368 1_1:+13568278 Msa0009290:three_prime_UTR
TCAGCTAACACCAGCTCAGT+TGG 0.513410 1_1:+13563090 Msa0009290:CDS
AGAGAAATTATGTCCCAACT+TGG 0.513467 1_1:+13567951 Msa0009290:three_prime_UTR
GATGCCATTGTCTTGGCTGT+TGG 0.513536 1_1:+13570457 Msa0009290:three_prime_UTR
TCCACCAGAAGCATCATGCC+TGG 0.514509 1_1:-13564687 None:intergenic
ATTTGTCAAGGTGTTCCCTC+GGG 0.514875 1_1:+13568886 Msa0009290:three_prime_UTR
CTTTCCTGAGTTCACTGGGC+GGG 0.515584 1_1:+13569841 Msa0009290:three_prime_UTR
GCTTATGTTCTTGACGTGGA+TGG 0.515766 1_1:+13568701 Msa0009290:three_prime_UTR
AGAGGCAATTTGGCGACTGC+AGG 0.515865 1_1:+13565871 Msa0009290:three_prime_UTR
TTCTCTCGAATAGGATCGAT+CGG 0.516887 1_1:-13565286 None:intergenic
GTCTTGATCTCAGGTCATGA+TGG 0.517512 1_1:+13567573 Msa0009290:three_prime_UTR
TTGTGGTGAATGCAAACATT+GGG 0.518411 1_1:+13570392 Msa0009290:three_prime_UTR
TAAATCCGATAGTCGGAGAA+AGG 0.518745 1_1:+13562040 Msa0009290:CDS
AGTACCACAGTCCATGCAAC+GGG 0.518801 1_1:-13569601 None:intergenic
CTTGATAGCAATTTACAGGA+TGG 0.519125 1_1:+13570680 Msa0009290:three_prime_UTR
AGCAACACGTTTCTTTGAGA+AGG 0.519166 1_1:-13565684 None:intergenic
TCAAAGGCGAGTCAATCTAA+TGG 0.520385 1_1:+13570351 Msa0009290:three_prime_UTR
CTGACCCCGCCGACAGTCCC+CGG 0.520425 1_1:-13571580 None:intergenic
ACCGATGGGACTTTATGATC+CGG 0.520722 1_1:+13560236 Msa0009290:CDS
AGAAACACTTGTTCTATCAC+TGG 0.520751 1_1:-13562587 None:intergenic
GGATAAGGTTGAAGAGGAAG+AGG 0.521309 1_1:+13568763 Msa0009290:three_prime_UTR
CAAAAGGAGTGCCATTAAGC+AGG 0.521565 1_1:+13566837 Msa0009290:three_prime_UTR
ATTTGGCGACTGCAGGTTGA+CGG 0.521760 1_1:+13565878 Msa0009290:three_prime_UTR
TAATGGGCAAAATATTTACC+AGG 0.521787 1_1:-13563165 None:intergenic
GGAAATGCTATTACTTCCCA+TGG 0.522539 1_1:+13565141 Msa0009290:three_prime_UTR
CAATTAAGATGTTGTCTTTG+GGG 0.522679 1_1:-13568475 None:intergenic
ATGCAGATCTTGGCAATGAA+AGG 0.522715 1_1:+13563125 Msa0009290:CDS
GGAATTCAACAGCCGGAGTA+GGG 0.522875 1_1:+13567285 Msa0009290:three_prime_UTR
CATTAGCAACCAATGTTTGG+TGG 0.523631 1_1:-13567668 None:intergenic
GGAACTCCAAGTCGAGTTGA+GGG 0.523992 1_1:+13566094 Msa0009290:three_prime_UTR
AAAAGATCCTAGAACATATG+AGG 0.524973 1_1:+13571006 Msa0009290:three_prime_UTR
AGGAATTCAACAGCCGGAGT+AGG 0.525154 1_1:+13567284 Msa0009290:three_prime_UTR
ATTCCAGTCTCGGTGCAACC+TGG 0.526003 1_1:+13568727 Msa0009290:three_prime_UTR
GGTGATGATGGAGACAAAGC+CGG 0.526031 1_1:+13569554 Msa0009290:three_prime_UTR
ACTGATGCTGTTAAACATAG+AGG 0.526118 1_1:+13569462 Msa0009290:three_prime_UTR
TGAAGCTTTGCAATAGCAAG+TGG 0.526181 1_1:-13566271 None:intergenic
GAATGACTTCTGAGGCATTG+AGG 0.527182 1_1:+13563269 Msa0009290:three_prime_UTR
CAAGTTCCTTGCATTTCAGT+AGG 0.527203 1_1:-13564095 None:intergenic
GGAAAACGATGCCATTGTCT+TGG 0.527343 1_1:+13570450 Msa0009290:three_prime_UTR
AAGGCGGTGGCACTGTTCCT+CGG 0.527562 1_1:-13565365 None:intergenic
GTTCTCTTGACAGGAGGTCG+TGG 0.527652 1_1:-13569980 None:intergenic
TAACTGAAGAGGTGCAAGGT+TGG 0.529064 1_1:+13563245 Msa0009290:three_prime_UTR
TTGCAGCCGGGGACTGTCGG+CGG 0.529222 1_1:+13571574 Msa0009290:three_prime_UTR
GGATCTTCCTGTGCCTGGAA+GGG 0.529343 1_1:+13570601 Msa0009290:three_prime_UTR
AAGGTTGTGGTCATTGGCGG+GGG 0.530501 1_1:+13570728 Msa0009290:three_prime_UTR
AGCAATGACTACATTGGTAA+AGG 0.530825 1_1:+13568401 Msa0009290:three_prime_UTR
AAACATGAAAACTGACAAAG+TGG 0.531029 1_1:+13570321 Msa0009290:three_prime_UTR
TCTTCTTCCTAAATTTGTCA+AGG 0.531640 1_1:+13568874 Msa0009290:three_prime_UTR
ACGTACCCAAAAGCTTTCAA+TGG 0.531674 1_1:-13565014 None:intergenic
TCTTGAGTAGCAATTCCAAC+AGG 0.531726 1_1:-13567852 None:intergenic
TGCCGAGTCTCTTGGTCACA+AGG 0.532429 1_1:+13562499 Msa0009290:CDS
GAAAGAGCTGATCGTATTGG+TGG 0.532661 1_1:+13570277 Msa0009290:three_prime_UTR
TTCGACACCATCCTTTGCCA+TGG 0.533007 1_1:-13565158 None:intergenic
CAGCTAACACCAGCTCAGTT+GGG 0.533078 1_1:+13563091 Msa0009290:CDS
TATCTGAGCACCTTTATATG+AGG 0.533142 1_1:-13566023 None:intergenic
GCCCAACCCTGTGTTATCTG+TGG 0.534025 1_1:-13562543 None:intergenic
TAAATATCGTGATGGGGAGG+TGG 0.534318 1_1:-13567317 None:intergenic
TGCAAATACCCCGTCAACAC+TGG 0.534854 1_1:-13571556 None:intergenic
ATCTTGGAGCTACATTAGAT+AGG 0.534892 1_1:+13564547 Msa0009290:three_prime_UTR
TATCCAGATCTACAAGCTCC+AGG 0.535343 1_1:-13568745 None:intergenic
TATCACTGGTTCGGTCAGCT+GGG 0.535352 1_1:-13562573 None:intergenic
TCATACCCAGTTCTCTTGAC+AGG 0.535631 1_1:-13569989 None:intergenic
CACAAACAGTTTGCTTGCCA+AGG 0.535921 1_1:+13568829 Msa0009290:three_prime_UTR
TTTGAAAGAGCTGATCGTAT+TGG 0.536612 1_1:+13570274 Msa0009290:three_prime_UTR
CGTATGGAGCCTCTTGCTGA+TGG 0.536872 1_1:+13566802 Msa0009290:three_prime_UTR
GGTACTCACTAAGAGGTTTG+TGG 0.536919 1_1:+13571027 Msa0009290:three_prime_UTR
TGGATATGGATGGTATCAGC+TGG 0.537289 1_1:-13568305 None:intergenic
ACGTGGTAAGAAAGGGTTGG+AGG 0.537346 1_1:+13565492 Msa0009290:three_prime_UTR
CAAGAATCTTTATCAAAAGC+CGG 0.537388 1_1:-13560255 None:intergenic
AATCCTCAGGGAGCAAAACC+TGG 0.537694 1_1:+13567209 Msa0009290:intron
ATTTAAAATACTTACCGCCT+CGG 0.537873 1_1:-13571200 None:intergenic
AAGAAGCTGATGATTGCAAT+GGG 0.538028 1_1:+13561943 Msa0009290:CDS
TAATATTCACCCAACTGAGC+TGG 0.538188 1_1:-13563100 None:intergenic
TGCCAAGGGCAAGAAGGTTG+TGG 0.538320 1_1:+13570715 Msa0009290:three_prime_UTR
TGGCAGTTAGTAAGCCGAAT+GGG 0.538371 1_1:+13571865 Msa0009290:three_prime_UTR
ATATGTTTATATCGAAGTGC+TGG 0.539224 1_1:+13563527 Msa0009290:three_prime_UTR
TTCTCCAATGATAATCTCCA+GGG 0.539536 1_1:-13566222 None:intergenic
TCTGCAGCTGCCAAGCCTGA+TGG 0.540455 1_1:-13570217 None:intergenic
CAAGAACCTTCACAAGGTGC+AGG 0.540706 1_1:-13569869 None:intergenic
ATGAAGGTTCTTGCCAAGAT+GGG 0.541530 1_1:+13565986 Msa0009290:three_prime_UTR
CATAATAAAAGAAAAGTGAA+TGG 0.541561 1_1:+13571814 Msa0009290:three_prime_UTR
ATTCAGCTCTGATGGAGCCA+TGG 0.541723 1_1:+13564399 Msa0009290:three_prime_UTR
CCCAACCCTGTGTTATCTGT+GGG 0.541976 1_1:-13562542 None:intergenic
ACGGGGAAATCAACACACTC+AGG 0.541985 1_1:+13563708 Msa0009290:three_prime_UTR
CATATGAGGTACTCACTAAG+AGG 0.542147 1_1:+13571020 Msa0009290:three_prime_UTR
CTGTAATTCCGTCGCTGTGG+AGG 0.542218 1_1:-13562911 None:intergenic
AGGTGAGCAACCATCTCGTA+TGG 0.542510 1_1:+13566786 Msa0009290:three_prime_UTR
CCCTCAGCCACCACCAACCA+GGG 0.542711 1_1:+13570823 Msa0009290:three_prime_UTR
AGACAACAGATCAAACTTCA+AGG 0.543204 1_1:+13571512 Msa0009290:three_prime_UTR
AGATGCAGTGGAGCAGGCTG+CGG 0.543427 1_1:+13568955 Msa0009290:three_prime_UTR
GGAGCTTGTAGATCTGGATA+AGG 0.543560 1_1:+13568748 Msa0009290:three_prime_UTR
TGCAATACTAACCGTGCTGT+GGG 0.544608 1_1:+13568233 Msa0009290:three_prime_UTR
GTGGTGAGGCATATTTCAAT+GGG 0.545435 1_1:+13568525 Msa0009290:three_prime_UTR
ACAACTTTCCTGAGTTCACT+GGG 0.545609 1_1:+13569837 Msa0009290:three_prime_UTR
TCAAATAGTAATCAAGGAAG+CGG 0.546015 1_1:-13563315 None:intergenic
AAAGAAGACCACGGTATTGG+TGG 0.546089 1_1:+13571669 Msa0009290:three_prime_UTR
CATACTCTTCTGCACCAAGA+AGG 0.546106 1_1:-13567761 None:intergenic
GTTGCACCCTCAACTCGACT+TGG 0.546303 1_1:-13566100 None:intergenic
CGGCAACCTCCCTAATCCAC+CGG 0.546328 1_1:-13560166 None:intergenic
TCCTCTTGGGAACAAAATAC+CGG 0.546509 1_1:+13569751 Msa0009290:three_prime_UTR
ATGCCCATATTTGGCTGTAG+AGG 0.547485 1_1:+13565853 Msa0009290:three_prime_UTR
AGCGTGAGGGTGTTCAGTAT+AGG 0.547988 1_1:+13569499 Msa0009290:three_prime_UTR
TGCTATTGCAAAGCTTCAAG+AGG 0.548136 1_1:+13566276 Msa0009290:three_prime_UTR
GGTTGGGCACGATCCCAGCT+AGG 0.548447 1_1:-13563665 None:intergenic
CAATTGAATAAATATCGTGA+TGG 0.548519 1_1:-13567325 None:intergenic
GGCTGTGCCGGATAAACCGA+TGG 0.548936 1_1:+13560221 Msa0009290:CDS
TTCAGCTCTGATGGAGCCAT+GGG 0.549205 1_1:+13564400 Msa0009290:three_prime_UTR
GCCATTAAGCAGGTTGCTAG+TGG 0.550027 1_1:+13566847 Msa0009290:three_prime_UTR
CACAAGAACACCTGTCCTGT+TGG 0.550209 1_1:+13567837 Msa0009290:three_prime_UTR
TCTATGTCACCCACAGTGGA+CGG 0.550269 1_1:+13564592 Msa0009290:three_prime_UTR
ATACTCTTCTGCACCAAGAA+GGG 0.551147 1_1:-13567760 None:intergenic
TCACTTTGGTGAAAGTGGAT+AGG 0.551454 1_1:+13563475 Msa0009290:three_prime_UTR
GGCCCAATACACGAAAAGGT+TGG 0.552118 1_1:-13563682 None:intergenic
CAAATCTAACCTGAGGCCAT+GGG 0.552761 1_1:-13570856 None:intergenic
TCTCCTATAACCTTGTGGCC+AGG 0.552966 1_1:-13567248 None:intergenic
CATCTCTGCCAAGGGCAAGA+AGG 0.553223 1_1:+13570709 Msa0009290:three_prime_UTR
CCAGAAGATGTGTGTAGGAA+AGG 0.553482 1_1:+13564654 Msa0009290:three_prime_UTR
TCGACACCATCCTTTGCCAT+GGG 0.553770 1_1:-13565157 None:intergenic
GATAGCTCCCTTCCAGGCAC+AGG 0.555301 1_1:-13570608 None:intergenic
TCTTACCTAAATCCGATAGT+CGG 0.555826 1_1:+13562033 Msa0009290:CDS
GCCCACAGATAACACAGGGT+TGG 0.556582 1_1:+13562541 Msa0009290:CDS
TTGGCAATGTGGCACTGTAT+GGG 0.556692 1_1:+13568495 Msa0009290:three_prime_UTR
ACTAATTCGAGCAGCTGGGT+TGG 0.557364 1_1:-13567481 None:intergenic
TGAAGTGGTACGTGTTCGCT+GGG 0.557884 1_1:+13571078 Msa0009290:three_prime_UTR
CTGCAATACTAACCGTGCTG+TGG 0.558558 1_1:+13568232 Msa0009290:three_prime_UTR
TTTCAACTCACATGATGAGT+TGG 0.558713 1_1:+13565928 Msa0009290:three_prime_UTR
AATTTGTCAAGGTGTTCCCT+CGG 0.558932 1_1:+13568885 Msa0009290:three_prime_UTR
GTGAAACTAGTATCTGAAGC+AGG 0.560077 1_1:+13567504 Msa0009290:three_prime_UTR
AGATCTGGATAAGGTTGAAG+AGG 0.561017 1_1:+13568757 Msa0009290:three_prime_UTR
ATGGCTCAAGGAATCCCAAA+AGG 0.561810 1_1:+13566821 Msa0009290:three_prime_UTR
TGGAAGTGGACCATCAGGCT+TGG 0.561913 1_1:+13570207 Msa0009290:three_prime_UTR
ACAGGAGCATCCAGATGGAC+TGG 0.563158 1_1:+13567600 Msa0009290:three_prime_UTR
CTATGTCACCCACAGTGGAC+GGG 0.564251 1_1:+13564593 Msa0009290:three_prime_UTR
TACTCATTGGCAAGACCCTA+CGG 0.564288 1_1:+13564756 Msa0009290:three_prime_UTR
TCGTTTGCGTCCGTTAGCGA+GGG 0.566413 1_1:+13560047 Msa0009290:CDS
CAGGCTGTAGTTGAAGGTGT+TGG 0.566534 1_1:+13568587 Msa0009290:three_prime_UTR
GGATGCTGGATTAGATGCAA+TGG 0.568184 1_1:+13563342 Msa0009290:three_prime_UTR
TGGGAGTATAGAGTTAGTGG+AGG 0.568505 1_1:-13563200 None:intergenic
GTACAACTCTGCAAACTGAC+GGG 0.568963 1_1:+13567703 Msa0009290:three_prime_UTR
GACACTGGCACAGATTGCAT+TGG 0.569288 1_1:+13570752 Msa0009290:three_prime_UTR
CAAACACACAGTGATGACTT+AGG 0.569996 1_1:+13571743 Msa0009290:three_prime_UTR
ACTTCTATGCGATGTATGGT+TGG 0.570003 1_1:+13565316 Msa0009290:three_prime_UTR
GAGAAATTATGTCCCAACTT+GGG 0.571087 1_1:+13567952 Msa0009290:three_prime_UTR
CTGAGGCCATGGGTTGCCTG+AGG 0.571362 1_1:-13570846 None:intergenic
CCTCAAGGAAACTATGCAGT+TGG 0.571405 1_1:+13562002 Msa0009290:CDS
TATAGACATTACTTACTCAA+AGG 0.571610 1_1:+13565468 Msa0009290:three_prime_UTR
AGCCTCTTGCTGATGGCTCA+AGG 0.571655 1_1:+13566809 Msa0009290:three_prime_UTR
CCAGGGCCTCAGGCAACCCA+TGG 0.571740 1_1:+13570840 Msa0009290:three_prime_UTR
GGCACTCCTGATATGGTTGG+TGG 0.571899 1_1:-13564849 None:intergenic
TGGAACTCCAAGTCGAGTTG+AGG 0.571915 1_1:+13566093 Msa0009290:three_prime_UTR
TACAGGACTGTTATTTACAA+AGG 0.572429 1_1:+13563067 Msa0009290:intron
CAACAGGACAGGTGTTCTTG+TGG 0.573309 1_1:-13567836 None:intergenic
AAGAACCTTCATCATTCCAT+AGG 0.573827 1_1:-13565975 None:intergenic
TATATTATTACAGTTACCGA+TGG 0.574354 1_1:+13564519 Msa0009290:intron
CATTATAACCCGTCCACTGT+GGG 0.574801 1_1:-13564601 None:intergenic
TTTCGTGTATTGGGCCACAA+CGG 0.575074 1_1:+13563689 Msa0009290:three_prime_UTR
TACCGTGGTCTTCTTTGGTG+AGG 0.575127 1_1:-13571662 None:intergenic
TGGATGGAAAATTCCAGTCT+CGG 0.575626 1_1:+13568717 Msa0009290:three_prime_UTR
AATTTACATGAGATAAGAGC+TGG 0.576241 1_1:-13564428 None:intergenic
TGGGTGACATAGAAGCGGCC+AGG 0.578096 1_1:-13564582 None:intergenic
AGAACAGTCAATGAAATGGT+TGG 0.578836 1_1:+13567978 Msa0009290:three_prime_UTR
GATGCAGCCAAGAGTAATGA+GGG 0.578911 1_1:-13567799 None:intergenic
TGGTAACTACATCTCTGCCA+AGG 0.579754 1_1:+13570700 Msa0009290:three_prime_UTR
ATCACTAGGAATTCAACAGC+CGG 0.580064 1_1:+13567278 Msa0009290:three_prime_UTR
GCAAATACCGGTGATGGTGC+TGG 0.580150 1_1:+13560679 Msa0009290:CDS
TACCTCTATCAGAAAGAACA+AGG 0.580545 1_1:-13565573 None:intergenic
ATTAGCAACCAATGTTTGGT+GGG 0.580659 1_1:-13567667 None:intergenic
GTGTGTTGATTTCCCCGTTG+TGG 0.581076 1_1:-13563703 None:intergenic
GGAGCTACATTAGATAGGAA+TGG 0.581522 1_1:+13564552 Msa0009290:three_prime_UTR
TCATAAAATGCTTTACGCTG+AGG 0.582235 1_1:-13564371 None:intergenic
TTACTTATAGCGTTTATCTG+AGG 0.582635 1_1:-13560015 None:intergenic
AAGGATGGTGTCGAAGCACT+TGG 0.582750 1_1:+13565166 Msa0009290:three_prime_UTR
TGAAAGGTTTACGAGCTACA+TGG 0.582803 1_1:+13563141 Msa0009290:CDS
TCACACTAATTCGAGCAGCT+GGG 0.583241 1_1:-13567485 None:intergenic
TGATGCAGCCAAGAGTAATG+AGG 0.583340 1_1:-13567800 None:intergenic
TGTGAAGGGAATAATCACTT+TGG 0.583451 1_1:+13563461 Msa0009290:three_prime_UTR
TGACGGGGTATTTGCAGCCG+GGG 0.583705 1_1:+13571563 Msa0009290:three_prime_UTR
GCTATTACTTCCCATGGCAA+AGG 0.583827 1_1:+13565147 Msa0009290:three_prime_UTR
AGTAGCAATTCCAACAGGAC+AGG 0.583978 1_1:-13567847 None:intergenic
GACCTCCTGTCAAGAGAACT+GGG 0.584334 1_1:+13569984 Msa0009290:three_prime_UTR
GTCAATCTAATGGCTGAGGA+AGG 0.584482 1_1:+13570361 Msa0009290:three_prime_UTR
AACGAAAGAGAATTCGACAT+TGG 0.585496 1_1:-13559970 None:intergenic
GGGCAGTGAGGAGATTATTG+AGG 0.586900 1_1:+13571141 Msa0009290:three_prime_UTR
GTTTACGAGCTACATGGCCC+TGG 0.587049 1_1:+13563147 Msa0009290:CDS
GCTCAGATATTTGAAGCTCT+GGG 0.587156 1_1:+13566037 Msa0009290:three_prime_UTR
AAAGAAGCTGATGATTGCAA+TGG 0.587300 1_1:+13561942 Msa0009290:CDS
GCAAGATCATGGTTTGGACA+TGG 0.587827 1_1:+13568133 Msa0009290:three_prime_UTR
CGATGTATGGTTGGTCCCGA+AGG 0.589514 1_1:+13565325 Msa0009290:three_prime_UTR
GCAGTAGCATTGCCAAACCC+TGG 0.589699 1_1:+13566205 Msa0009290:three_prime_UTR
GAAGTGGTGGTGGTTTGGAG+AGG 0.589850 1_1:+13560127 Msa0009290:CDS
TTTGTGGTGAATGCAAACAT+TGG 0.589955 1_1:+13570391 Msa0009290:three_prime_UTR
CTCTCTTGAACGACTTCGAG+AGG 0.590515 1_1:+13570429 Msa0009290:three_prime_UTR
GCGAGTCAATCTAATGGCTG+AGG 0.590718 1_1:+13570357 Msa0009290:three_prime_UTR
TGATGGTCCACTTCCAACAA+TGG 0.592063 1_1:-13570200 None:intergenic
CTCGGGGCCAAGGAATCCCA+TGG 0.592068 1_1:-13571182 None:intergenic
ACTTCAGATAAAGATGGCCC+AGG 0.592352 1_1:+13566912 Msa0009290:three_prime_UTR
GGAGGCACTCCTGATATGGT+TGG 0.592789 1_1:-13564852 None:intergenic
ACGGCAATGAACAAAATTGG+AGG 0.593568 1_1:+13566517 Msa0009290:three_prime_UTR
AATTTCTTCAGAGTTGTGAA+GGG 0.593602 1_1:+13563447 Msa0009290:three_prime_UTR
TAAAGAAATTGAGGGCAGTG+AGG 0.593612 1_1:+13571129 Msa0009290:three_prime_UTR
TGCAGCCTCTAAAGATGCAG+TGG 0.593644 1_1:+13568943 Msa0009290:three_prime_UTR
ACCAGTAAATTGGATATGGA+TGG 0.593921 1_1:-13568315 None:intergenic
CCATTAAGCAGGTTGCTAGT+GGG 0.594421 1_1:+13566848 Msa0009290:three_prime_UTR
TTTGTTGCTTACGAGCGTGA+GGG 0.594921 1_1:+13569486 Msa0009290:three_prime_UTR
CATATTAAGGAAGCTAAGCA+TGG 0.595018 1_1:+13562866 Msa0009290:CDS
ATTGGAACATCCATTCGTCA+TGG 0.595478 1_1:+13570770 Msa0009290:three_prime_UTR
GTGATGATGGAGACAAAGCC+GGG 0.595663 1_1:+13569555 Msa0009290:three_prime_UTR
AAGCACCTATGGAATGATGA+AGG 0.595846 1_1:+13565970 Msa0009290:three_prime_UTR
AGGAAAGGAAGACTAAATCC+AGG 0.596451 1_1:+13564669 Msa0009290:three_prime_UTR
ATAAGAGCTGGCCCATCCCA+TGG 0.596696 1_1:-13564416 None:intergenic
TTACTTCCCATGGCAAAGGA+TGG 0.596996 1_1:+13565151 Msa0009290:three_prime_UTR
TTATGGGTCAATATCATTGG+AGG 0.597039 1_1:+13566477 Msa0009290:three_prime_UTR
ATTAGATGCAATGGTTGAGT+TGG 0.598881 1_1:+13563351 Msa0009290:three_prime_UTR
AACAAGGCTTGCAATTTGCG+AGG 0.599342 1_1:+13566358 Msa0009290:three_prime_UTR
TTAACCGCCACTCTGAGCTT+CGG 0.599960 1_1:-13560186 None:intergenic
GGAGCAAAACCTGGTGAAGG+AGG 0.600558 1_1:+13567218 Msa0009290:three_prime_UTR
TTTAGTGTAAGGAAAGCAAG+AGG 0.600596 1_1:+13571921 Msa0009290:three_prime_UTR
AACCTTGTGACCAAGAGACT+CGG 0.600868 1_1:-13562501 None:intergenic
TCCAGGCATGATGCTTCTGG+TGG 0.600988 1_1:+13564686 Msa0009290:three_prime_UTR
CAAACCCGCCCAGTGAACTC+AGG 0.601302 1_1:-13569845 None:intergenic
TGATGAACTTCAGATAAAGA+TGG 0.601377 1_1:+13566906 Msa0009290:three_prime_UTR
CCATTATAACCCGTCCACTG+TGG 0.601730 1_1:-13564602 None:intergenic
ATCAGGATGAATTTGTCAAG+AGG 0.602462 1_1:+13571694 Msa0009290:three_prime_UTR
GGTGGCAAGAAGCACTAGAG+AGG 0.602758 1_1:+13569801 Msa0009290:three_prime_UTR
AAAATCCACAACCTGTAACA+AGG 0.603649 1_1:-13561970 None:intergenic
CTCTTGGCTGCATCATGATG+CGG 0.603718 1_1:+13567808 Msa0009290:three_prime_UTR
TGAGGCATATTTCAATGGGA+TGG 0.603944 1_1:+13568529 Msa0009290:three_prime_UTR
AGCAGTACAACCATGACGAA+TGG 0.603955 1_1:-13570780 None:intergenic
GGAACGTGGTAAGAAAGGGT+TGG 0.604195 1_1:+13565489 Msa0009290:three_prime_UTR
GAGGTACAGGAGCATCCAGA+TGG 0.605314 1_1:+13567595 Msa0009290:three_prime_UTR
ACTGCATAGTTTCCTTGAGG+AGG 0.605666 1_1:-13561999 None:intergenic
AGCTAGTGTATCAAAATAGG+TGG 0.605693 1_1:+13569783 Msa0009290:three_prime_UTR
CAGGGAGCAAAACCTGGTGA+AGG 0.608127 1_1:+13567215 Msa0009290:intron
CTTCTCTACCAGTGTTGACG+GGG 0.609138 1_1:+13571548 Msa0009290:three_prime_UTR
AGGTGAACTTCCTGGCCACA+AGG 0.610225 1_1:+13567238 Msa0009290:three_prime_UTR
GCATTAAACCTCCACAGCGA+CGG 0.610370 1_1:+13562903 Msa0009290:CDS
CGAGGGCCTACTGAAATGCA+AGG 0.610723 1_1:+13564089 Msa0009290:three_prime_UTR
ACAAAGTGGATATAGTTCAA+AGG 0.611112 1_1:+13570335 Msa0009290:three_prime_UTR
TTGTAGGATAAAAGCACGCG+AGG 0.611187 1_1:+13564071 Msa0009290:intron
AGTTGTTAAAGGACTTGAAG+TGG 0.611360 1_1:+13571063 Msa0009290:three_prime_UTR
ACAAGGCTTGCAATTTGCGA+GGG 0.611436 1_1:+13566359 Msa0009290:three_prime_UTR
GCCGGATCATAAAGTCCCAT+CGG 0.611604 1_1:-13560237 None:intergenic
AGATGATGAAGCCCAAGCAG+TGG 0.612771 1_1:+13568994 Msa0009290:three_prime_UTR
GGGACGAAATTGCGAAGTGG+TGG 0.614112 1_1:+13560114 Msa0009290:CDS
GGCCCACACAGCATTAGCAA+CGG 0.614447 1_1:+13566498 Msa0009290:three_prime_UTR
GGGAATCCGGTGGATTAGGG+AGG 0.615111 1_1:+13560160 Msa0009290:CDS
CGGGGAAATCAACACACTCA+GGG 0.615185 1_1:+13563709 Msa0009290:three_prime_UTR
TCAGCCAGACCAAGTTCCCA+AGG 0.615518 1_1:-13567642 None:intergenic
TATACTCCCACAAACAGCAT+AGG 0.617090 1_1:+13563213 Msa0009290:CDS
CAGAAATGGTGCACTTCGCG+TGG 0.617329 1_1:-13565800 None:intergenic
GTGGTATGGGCTATTTCAGA+GGG 0.617518 1_1:+13571609 Msa0009290:three_prime_UTR
AAAGCAGAAGATCGAACTGA+AGG 0.618157 1_1:+13564791 Msa0009290:three_prime_UTR
CATGGCTAGTAAAACTAGGT+CGG 0.618861 1_1:-13571164 None:intergenic
TGATGGTGCTGGTATACTTG+TGG 0.619103 1_1:+13560690 Msa0009290:CDS
TTCCTTGAGCCATCAGCAAG+AGG 0.619667 1_1:-13566811 None:intergenic
GCAGCCGGGGACTGTCGGCG+GGG 0.620048 1_1:+13571576 Msa0009290:three_prime_UTR
CATGGGATTCCTTGGCCCCG+AGG 0.620666 1_1:+13571183 Msa0009290:three_prime_UTR
GGCTGAGACCCACCAAACAT+TGG 0.620938 1_1:+13567659 Msa0009290:three_prime_UTR
AAGAACCTTCACAAGGTGCA+GGG 0.621039 1_1:-13569868 None:intergenic
GGTGATAGCAATGACTACAT+TGG 0.621179 1_1:+13568395 Msa0009290:three_prime_UTR
GTTGGGCACGATCCCAGCTA+GGG 0.621573 1_1:-13563664 None:intergenic
TCGGCGGGGTCAGTCACTGG+TGG 0.622579 1_1:+13571590 Msa0009290:three_prime_UTR
ATCCCATGGCTAGTAAAACT+AGG 0.624585 1_1:-13571168 None:intergenic
CGGCAATGAACAAAATTGGA+GGG 0.625159 1_1:+13566518 Msa0009290:three_prime_UTR
TGGCAATGTGGCACTGTATG+GGG 0.625835 1_1:+13568496 Msa0009290:three_prime_UTR
GACCATTCATGAATTGAACA+AGG 0.626555 1_1:+13566342 Msa0009290:three_prime_UTR
TGTGGATGTGAAGCAAATAC+CGG 0.626570 1_1:+13560667 Msa0009290:CDS
CTCTTCTGCACCAAGAAGGG+CGG 0.626661 1_1:-13567757 None:intergenic
GAGTACCACAGTCCATGCAA+CGG 0.627028 1_1:-13569602 None:intergenic
GCAAGAGGCTCCATACGAGA+TGG 0.627034 1_1:-13566796 None:intergenic
CGTACAACTCTGCAAACTGA+CGG 0.627263 1_1:+13567702 Msa0009290:three_prime_UTR
CCAATGTGATTCCAGGACAA+AGG 0.628305 1_1:-13568364 None:intergenic
CACTGTGGGTGACATAGAAG+CGG 0.628359 1_1:-13564587 None:intergenic
TTGGCAGTTAGTAAGCCGAA+TGG 0.629166 1_1:+13571864 Msa0009290:three_prime_UTR
CCAGGAGAGAAAATCCGAGA+AGG 0.629276 1_1:-13566172 None:intergenic
TTCCTACACACATCTTCTGG+AGG 0.629380 1_1:-13564651 None:intergenic
TTGCCGTTGCTAATGCTGTG+TGG 0.629935 1_1:-13566501 None:intergenic
GGAGTTGGGGTAATTGCTAG+TGG 0.630024 1_1:+13567525 Msa0009290:three_prime_UTR
TGTGAAGCAAATACCGGTGA+TGG 0.631858 1_1:+13560673 Msa0009290:CDS
ATTTCCTTAGTGGATAAAAG+GGG 0.632445 1_1:-13565400 None:intergenic
GATGTGGATATGGAAAATAT+GGG 0.633890 1_1:+13564972 Msa0009290:three_prime_UTR
CGTCAACACTGGTAGAGAAG+CGG 0.634048 1_1:-13571545 None:intergenic
CATGGATGTGAGTACATGAC+TGG 0.634657 1_1:+13568614 Msa0009290:three_prime_UTR
TTAAAATACTTACCGCCTCG+GGG 0.635033 1_1:-13571198 None:intergenic
CCAGACCAACTAGAAAGCAT+CGG 0.635395 1_1:-13563419 None:intergenic
TGGACTGATGAGCCCTACTC+CGG 0.636275 1_1:-13567297 None:intergenic
TGAATGTGCTATCATTGACA+AGG 0.637597 1_1:+13569934 Msa0009290:three_prime_UTR
GCACACAATGCAATTAGTGA+AGG 0.637780 1_1:+13565541 Msa0009290:three_prime_UTR
CGTGTGTGGAGAGGAAGAGA+TGG 0.638565 1_1:+13560088 Msa0009290:CDS
GAATAAATATCGTGATGGGG+AGG 0.639669 1_1:-13567320 None:intergenic
CCAACTGCATAGTTTCCTTG+AGG 0.640514 1_1:-13562002 None:intergenic
AAGAAGACCACGGTATTGGT+GGG 0.640661 1_1:+13571670 Msa0009290:three_prime_UTR
AAGTATACCAGCACCATCAC+CGG 0.640785 1_1:-13560686 None:intergenic
ATGACACATAGAGGTGCTTG+TGG 0.640929 1_1:+13560649 Msa0009290:CDS
GGGATTCCTTGGCCCCGAGG+CGG 0.641100 1_1:+13571186 Msa0009290:three_prime_UTR
CCGAATGGGCGAAATAAGAA+CGG 0.641621 1_1:+13571879 Msa0009290:three_prime_UTR
GCGATGTTCTGCCACGTGTG+TGG 0.643503 1_1:+13560074 Msa0009290:CDS
ACAGCTGTCTAATGATGATG+TGG 0.643589 1_1:+13564956 Msa0009290:intron
GATTATCATTGGAGAAAAGG+TGG 0.643926 1_1:+13566229 Msa0009290:three_prime_UTR
CAACATCTTAATTGGCAATG+TGG 0.644377 1_1:+13568484 Msa0009290:three_prime_UTR
ATATCTGTTGTAGGTGAGGG+AGG 0.645838 1_1:+13566766 Msa0009290:intron
GTTTGCATGAAGAAACTCCA+TGG 0.645852 1_1:-13570645 None:intergenic
ATTGAATAAATATCGTGATG+GGG 0.647501 1_1:-13567323 None:intergenic
TAGGAGACATTGCTATCACT+AGG 0.647827 1_1:+13567264 Msa0009290:three_prime_UTR
CAATGTCTCCTATAACCTTG+TGG 0.649570 1_1:-13567253 None:intergenic
GGTGGTATGGGCTATTTCAG+AGG 0.650061 1_1:+13571608 Msa0009290:three_prime_UTR
GCCTCATGGCTTCTACCAAG+AGG 0.650414 1_1:+13560717 Msa0009290:CDS
TAAGCATAGTTCCCACAGCA+CGG 0.651768 1_1:-13568244 None:intergenic
CTGTGCCCACAGATAACACA+GGG 0.652097 1_1:+13562537 Msa0009290:CDS
TACCCAGTTCTCTTGACAGG+AGG 0.652918 1_1:-13569986 None:intergenic
CGCTTCTATGTCACCCACAG+TGG 0.653064 1_1:+13564588 Msa0009290:three_prime_UTR
AAGATCCCACCAAAAGCAAG+TGG 0.653595 1_1:+13565902 Msa0009290:three_prime_UTR
GGTAACTACATCTCTGCCAA+GGG 0.654784 1_1:+13570701 Msa0009290:three_prime_UTR
TTGATCTCAGGTCATGATGG+AGG 0.654926 1_1:+13567576 Msa0009290:three_prime_UTR
AATCTGTAATTCCGTCGCTG+TGG 0.655020 1_1:-13562914 None:intergenic
TTTGCTGCAGGTATGAGTGG+TGG 0.655414 1_1:+13568674 Msa0009290:three_prime_UTR
TATGGGCTATTTCAGAGGGA+AGG 0.656371 1_1:+13571613 Msa0009290:three_prime_UTR
CTGTTGGAGCTACAAAGCCA+AGG 0.656488 1_1:+13570473 Msa0009290:three_prime_UTR
GTGGCAGAACGACAAGAACA+TGG 0.656539 1_1:+13564346 Msa0009290:three_prime_UTR
CAACTTCGAGCATATCTGAA+CGG 0.657338 1_1:-13568001 None:intergenic
GGAACAACCAGTAACTGAAG+AGG 0.657677 1_1:+13563234 Msa0009290:exon
ATTCAGTTATGGGAATCCGG+TGG 0.657871 1_1:+13560150 Msa0009290:CDS
TCTCTTCCTCTCCACACACG+TGG 0.659166 1_1:-13560085 None:intergenic
AGCTCCAAGATAGTGACCAT+CGG 0.660161 1_1:-13564535 None:intergenic
GCACTTGCTTTAGGAACTCG+AGG 0.660179 1_1:-13571790 None:intergenic
TTAGCCACGAGGTTACTAAG+AGG 0.660312 1_1:+13568264 Msa0009290:three_prime_UTR
TGATTATGGTCACCAAGAAG+CGG 0.661211 1_1:+13570970 Msa0009290:three_prime_UTR
GCGGTGGCACTGTTCCTCGG+TGG 0.661642 1_1:-13565362 None:intergenic
GATAGGAATGGACTACGACC+TGG 0.661920 1_1:+13564564 Msa0009290:three_prime_UTR
ATTGGTAAAGGATTATCAGG+TGG 0.662245 1_1:+13568413 Msa0009290:three_prime_UTR
AGCTCCAACAGCCAAGACAA+TGG 0.662867 1_1:-13570461 None:intergenic
ATTGGAGGGAAATCCAACAC+AGG 0.663170 1_1:+13566532 Msa0009290:three_prime_UTR
GCTGTGCCGGATAAACCGAT+GGG 0.664095 1_1:+13560222 Msa0009290:CDS
AATCGCTTATGTTCTTGACG+TGG 0.665040 1_1:+13568697 Msa0009290:three_prime_UTR
AGTATCTGAAGCAGGAGTTG+GGG 0.665104 1_1:+13567512 Msa0009290:three_prime_UTR
TGTAGGATAAAAGCACGCGA+GGG 0.666250 1_1:+13564072 Msa0009290:intron
CCAGTAACTGAAGAGGTGCA+AGG 0.666500 1_1:+13563241 Msa0009290:three_prime_UTR
CTTGGTGACCATAATCAACA+CGG 0.668454 1_1:-13570964 None:intergenic
TTCCTCCAGAAGATGTGTGT+AGG 0.668934 1_1:+13564649 Msa0009290:three_prime_UTR
ACGGACGCAAACGAGCGTTA+GGG 0.669161 1_1:-13560038 None:intergenic
AGAACACGTTTATACTCCCG+AGG 0.669403 1_1:-13568902 None:intergenic
GAGGTAGCTGTCAACTTGTG+CGG 0.670141 1_1:-13571643 None:intergenic
CATCGCGTAACCCTCGCTAA+CGG 0.671163 1_1:-13560057 None:intergenic
GCACTGTATGGGGCAACACG+TGG 0.671204 1_1:+13568506 Msa0009290:three_prime_UTR
GTATGGGGCAACACGTGGTG+AGG 0.672015 1_1:+13568511 Msa0009290:three_prime_UTR
TTAGACCTGCAGCTGAACTG+CGG 0.672698 1_1:+13568081 Msa0009290:three_prime_UTR
CATATCTGCAGGCTCCCAAG+AGG 0.675340 1_1:+13569427 Msa0009290:intron
GCACGGTTAGTATTGCAGAT+CGG 0.676295 1_1:-13568227 None:intergenic
CCTGATTCCCACCAATACCG+TGG 0.679483 1_1:-13571677 None:intergenic
AATGGGCAAAATATTTACCA+GGG 0.680464 1_1:-13563164 None:intergenic
GTTGCCGAAGCTCAGAGTGG+CGG 0.682705 1_1:+13560182 Msa0009290:CDS
GGGAACTATGCTTAGCCACG+AGG 0.685008 1_1:+13568253 Msa0009290:three_prime_UTR
GGATGTGAGTACATGACTGG+TGG 0.686164 1_1:+13568617 Msa0009290:three_prime_UTR
CAGGATTCTCAATAATACCA+AGG 0.686405 1_1:-13569895 None:intergenic
TAATCAACACGGAATATGCG+AGG 0.688800 1_1:-13570953 None:intergenic
TCGTGTATTGGGCCACAACG+GGG 0.689288 1_1:+13563691 Msa0009290:three_prime_UTR
ACCTCTATCAGAAAGAACAA+GGG 0.690046 1_1:-13565572 None:intergenic
TCTGTGCCCACAGATAACAC+AGG 0.690913 1_1:+13562536 Msa0009290:CDS
TTTGAATGAGAAACCAAGTG+AGG 0.691416 1_1:+13569060 Msa0009290:three_prime_UTR
GGGGAAATCAACACACTCAG+GGG 0.694748 1_1:+13563710 Msa0009290:three_prime_UTR
GTTCTGCCACGTGTGTGGAG+AGG 0.695952 1_1:+13560079 Msa0009290:CDS
GCCTCTTGGTAGAAGCCATG+AGG 0.696170 1_1:-13560718 None:intergenic
TCTATCAGAAAGAACAAGGG+TGG 0.699310 1_1:-13565569 None:intergenic
TGATGATGATTCCTGAAGCG+TGG 0.699723 1_1:+13564327 Msa0009290:three_prime_UTR
TCTCGAATAGGATCGATCGG+AGG 0.699753 1_1:-13565283 None:intergenic
GATGTGAGTACATGACTGGT+GGG 0.701270 1_1:+13568618 Msa0009290:three_prime_UTR
TTGGTTAGGATGACACATAG+AGG 0.713523 1_1:+13560640 Msa0009290:CDS
ATTACTTACTCAAAGGAACG+TGG 0.719039 1_1:+13565475 Msa0009290:three_prime_UTR
GAGGTTGCCGAAGCTCAGAG+TGG 0.721355 1_1:+13560179 Msa0009290:CDS
AGGTTGGGGAATGACTTCTG+AGG 0.722875 1_1:+13563261 Msa0009290:three_prime_UTR
TGTACCTCTTAGTAACCTCG+TGG 0.724001 1_1:-13568268 None:intergenic
TCTGCCCGTTGCATGGACTG+TGG 0.726125 1_1:+13569597 Msa0009290:three_prime_UTR
TACCTCACCAAAGAAGACCA+CGG 0.726872 1_1:+13571660 Msa0009290:three_prime_UTR
ATGCAGCCAAGAGTAATGAG+GGG 0.729391 1_1:-13567798 None:intergenic
TTAGGGACGAAATTGCGAAG+TGG 0.730301 1_1:+13560111 Msa0009290:CDS
AGGACACAAGAACCTTCACA+AGG 0.731807 1_1:-13569875 None:intergenic
GCAGAGTTGTACGACCACGT+AGG 0.738951 1_1:-13567692 None:intergenic
GAACACGTTTATACTCCCGA+GGG 0.747245 1_1:-13568901 None:intergenic
TCGCCTGAATGATTGGAGTG+AGG 0.755904 1_1:+13569533 Msa0009290:three_prime_UTR
ACTTTCCTGAGTTCACTGGG+CGG 0.767226 1_1:+13569840 Msa0009290:three_prime_UTR
TTGGTTGCTAATGACCTACG+TGG 0.778234 1_1:+13567678 Msa0009290:three_prime_UTR
TGATCTGACAGAAACCACCG+AGG 0.841346 1_1:+13565348 Msa0009290:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAAAAATGTATAAATAA+AGG + chr1_1:13561418-13561437 Msa0009290:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr1_1:13561419-13561438 Msa0009290:intron 10.0%
!!! ATTTTTGTGTGTATTTATAT+AGG + chr1_1:13560597-13560616 Msa0009290:intron 15.0%
!!! ATTTTTTATCAAAATTGTGA+AGG - chr1_1:13561215-13561234 None:intergenic 15.0%
!! AAAATTGTGTCAATTAAATT+GGG - chr1_1:13561383-13561402 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr1_1:13561420-13561439 Msa0009290:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr1_1:13561483-13561502 Msa0009290:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr1_1:13561484-13561503 Msa0009290:intron 15.0%
!! ATAAATAGGTAAGAATATTA+TGG - chr1_1:13561663-13561682 None:intergenic 15.0%
!!! TTTTAGTTTTAGAATTACAA+GGG - chr1_1:13561784-13561803 None:intergenic 15.0%
!!! TTTTTAGTTTTAGAATTACA+AGG - chr1_1:13561785-13561804 None:intergenic 15.0%
!! AAAAAGGATGTATAATAATT+TGG + chr1_1:13562783-13562802 Msa0009290:intron 15.0%
!! TATAATAGTGTAAAAATCAA+AGG - chr1_1:13563570-13563589 None:intergenic 15.0%
!! TATTTATAAGAAATTGACAT+TGG - chr1_1:13564897-13564916 None:intergenic 15.0%
!! CATCAAAAAAATGAATTATA+GGG + chr1_1:13565429-13565448 Msa0009290:three_prime_UTR 15.0%
!! ATCAAAAAAATGAATTATAG+GGG + chr1_1:13565430-13565449 Msa0009290:three_prime_UTR 15.0%
!! AACAAAGATTTAAATACATT+AGG - chr1_1:13565653-13565672 None:intergenic 15.0%
!! TGTTTATGAATTTATATTCA+TGG + chr1_1:13567045-13567064 Msa0009290:intron 15.0%
!! AAATGTATTTAGATTAAACA+TGG - chr1_1:13569703-13569722 None:intergenic 15.0%
!!! ATACATTTTCATAAAATTTC+AGG + chr1_1:13569715-13569734 Msa0009290:intron 15.0%
!!! TCAATATTTTTAATAGATAC+AGG - chr1_1:13569917-13569936 None:intergenic 15.0%
!! TTTCAATTTAAAGAAATTGA+GGG + chr1_1:13571121-13571140 Msa0009290:three_prime_UTR 15.0%
!!! AATTAACATATTTGAAACTT+GGG - chr1_1:13571235-13571254 None:intergenic 15.0%
!!! TAATTAACATATTTGAAACT+TGG - chr1_1:13571236-13571255 None:intergenic 15.0%
!! AAGATAAATAATTTAGTGTA+AGG + chr1_1:13571910-13571929 Msa0009290:three_prime_UTR 15.0%
!!! TTATTTTTTCGTTTTCTGTT+AGG + chr1_1:13561136-13561155 Msa0009290:intron 20.0%
!!! AGGATATTTTAACAATAAAG+TGG - chr1_1:13561195-13561214 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG - chr1_1:13561384-13561403 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr1_1:13561443-13561462 Msa0009290:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr1_1:13561516-13561535 Msa0009290:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + chr1_1:13561517-13561536 Msa0009290:intron 20.0%
!!! TTTTTTAAGAACATGACTTA+TGG + chr1_1:13561618-13561637 Msa0009290:intron 20.0%
!!! ACAGAAAACATTTGATTTAT+TGG + chr1_1:13561882-13561901 Msa0009290:intron 20.0%
!!! CAGAAAACATTTGATTTATT+GGG + chr1_1:13561883-13561902 Msa0009290:intron 20.0%
!!! AAGCAAAAGTATATTTACTA+AGG + chr1_1:13562064-13562083 Msa0009290:CDS 20.0%
!! AAATCACTAACAATTAGAAA+AGG - chr1_1:13562244-13562263 None:intergenic 20.0%
!! AAATCAAATTTCAAACAAGA+CGG - chr1_1:13562314-13562333 None:intergenic 20.0%
!! ATACAAAAATAGCATAAACA+AGG - chr1_1:13562398-13562417 None:intergenic 20.0%
!! TACATAGTATTCATTTGTAA+GGG - chr1_1:13563794-13563813 None:intergenic 20.0%
!! AAAAACTTCATTTGTGAATA+TGG - chr1_1:13565075-13565094 None:intergenic 20.0%
!!! CCTATAATTCATTTTTTTGA+TGG - chr1_1:13565431-13565450 None:intergenic 20.0%
!! CCATCAAAAAAATGAATTAT+AGG + chr1_1:13565428-13565447 Msa0009290:three_prime_UTR 20.0%
!!! TTTTTTTTTTTCTTACCCAA+AGG + chr1_1:13566588-13566607 Msa0009290:intron 20.0%
!!! AAGTGTAGTTTTTTTACTTA+AGG + chr1_1:13567155-13567174 Msa0009290:intron 20.0%
!! AATTGAATAAATATCGTGAT+GGG - chr1_1:13567327-13567346 None:intergenic 20.0%
!!! CGTTATTAACTTCTTTTTTA+TGG + chr1_1:13567914-13567933 Msa0009290:three_prime_UTR 20.0%
!!! TATTAACTTCTTTTTTATGG+TGG + chr1_1:13567917-13567936 Msa0009290:three_prime_UTR 20.0%
!! GTAACAAACAGAAAATAAAA+TGG - chr1_1:13569133-13569152 None:intergenic 20.0%
!!! GAAAACTTTTTCTATGTTTT+GGG + chr1_1:13569153-13569172 Msa0009290:intron 20.0%
!!! TGTTATTACTTTTACTATAC+TGG + chr1_1:13569209-13569228 Msa0009290:intron 20.0%
!!! AAAAATATTTTAGACTAACC+TGG + chr1_1:13569286-13569305 Msa0009290:intron 20.0%
!! AAGTAATGAAAACTTGAAAA+TGG - chr1_1:13569652-13569671 None:intergenic 20.0%
!! ATAAAATTTCAGGAAAATTC+TGG + chr1_1:13569725-13569744 Msa0009290:intron 20.0%
!!! ATATTCAAAAATTTCTAGCT+AGG - chr1_1:13570114-13570133 None:intergenic 20.0%
!! GTTTCAATTTAAAGAAATTG+AGG + chr1_1:13571120-13571139 Msa0009290:three_prime_UTR 20.0%
!!! AAAAGAATTTTGCATGTTTA+TGG + chr1_1:13571255-13571274 Msa0009290:intron 20.0%
!! CATAATAAAAGAAAAGTGAA+TGG + chr1_1:13571814-13571833 Msa0009290:three_prime_UTR 20.0%
!!! TCTTATTTGGATTTTATTGT+TGG + chr1_1:13571995-13572014 Msa0009290:three_prime_UTR 20.0%
!!! CTTATTTGGATTTTATTGTT+GGG + chr1_1:13571996-13572015 Msa0009290:three_prime_UTR 20.0%
!!! TTTTTATTTAAGCAAAGTCA+AGG - chr1_1:13572152-13572171 None:intergenic 20.0%
!!! AGTAGCAGTATATACTTTTT+TGG + chr1_1:13561095-13561114 Msa0009290:intron 25.0%
! ATCATCATCAAACATAGTTT+AGG - chr1_1:13561244-13561263 None:intergenic 25.0%
! TCCAGTTTGTAAATAATTGT+GGG - chr1_1:13561295-13561314 None:intergenic 25.0%
! ATCCAGTTTGTAAATAATTG+TGG - chr1_1:13561296-13561315 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr1_1:13561442-13561461 Msa0009290:intron 25.0%
!! CTATTTTCCTTCTTCATATT+TGG + chr1_1:13561695-13561714 Msa0009290:intron 25.0%
!! CTTCTTCATATTTGGATTTT+GGG + chr1_1:13561703-13561722 Msa0009290:intron 25.0%
!!! TGAAAATAAAGTGCCAATTT+TGG + chr1_1:13561828-13561847 Msa0009290:intron 25.0%
! CTCACTATTAATTCCAAAAT+TGG - chr1_1:13561844-13561863 None:intergenic 25.0%
! CTTCTTTCAATATAACTAAC+AGG - chr1_1:13561929-13561948 None:intergenic 25.0%
! TACAAGACATGAAAAAAGTA+TGG - chr1_1:13562160-13562179 None:intergenic 25.0%
! AAATTCAGCACGATTAAAAA+TGG - chr1_1:13562187-13562206 None:intergenic 25.0%
!!! AAAAGTAACGCATTTTTTAG+TGG - chr1_1:13562210-13562229 None:intergenic 25.0%
! AACAATTAGAAAAGGAAACA+TGG - chr1_1:13562236-13562255 None:intergenic 25.0%
!! TTTTGTCTTTTAATGACTCA+TGG + chr1_1:13562261-13562280 Msa0009290:intron 25.0%
!! GAAATTTGATTTAATGCATG+AGG + chr1_1:13562322-13562341 Msa0009290:intron 25.0%
! GAAGGAAAAAAAAAATTGCA+TGG - chr1_1:13562372-13562391 None:intergenic 25.0%
! ATTTACTTCTCAAGAAAATC+AGG - chr1_1:13562985-13563004 None:intergenic 25.0%
!! TTTTCTTGAGAAGTAAATTC+TGG + chr1_1:13562987-13563006 Msa0009290:intron 25.0%
! GAATATTATTATGCAGATCT+TGG + chr1_1:13563115-13563134 Msa0009290:CDS 25.0%
! CCAAAATCAAATAGTAATCA+AGG - chr1_1:13563324-13563343 None:intergenic 25.0%
!!! CCTTGATTACTATTTGATTT+TGG + chr1_1:13563321-13563340 Msa0009290:three_prime_UTR 25.0%
!! AGGATTTTTGTAATTTCTAC+TGG + chr1_1:13563495-13563514 Msa0009290:three_prime_UTR 25.0%
! AACCATGAAAACTCATAATT+TGG + chr1_1:13563597-13563616 Msa0009290:three_prime_UTR 25.0%
!! TACCAAATTATGAGTTTTCA+TGG - chr1_1:13563602-13563621 None:intergenic 25.0%
! CTACATAGTATTCATTTGTA+AGG - chr1_1:13563795-13563814 None:intergenic 25.0%
!! CTTATCTCATGTAAATTTTC+CGG + chr1_1:13564434-13564453 Msa0009290:intron 25.0%
!! TTATCTCATGTAAATTTTCC+GGG + chr1_1:13564435-13564454 Msa0009290:intron 25.0%
! TATATTATTACAGTTACCGA+TGG + chr1_1:13564519-13564538 Msa0009290:intron 25.0%
!! TTTTATGTTATACTTACTGG+AGG - chr1_1:13564873-13564892 None:intergenic 25.0%
!! GGTTTTTATGTTATACTTAC+TGG - chr1_1:13564876-13564895 None:intergenic 25.0%
! AAAAAATGAATTATAGGGGA+TGG + chr1_1:13565434-13565453 Msa0009290:three_prime_UTR 25.0%
! TATAGACATTACTTACTCAA+AGG + chr1_1:13565468-13565487 Msa0009290:three_prime_UTR 25.0%
! TTAAATACATTAGGTGAATG+TGG - chr1_1:13565644-13565663 None:intergenic 25.0%
! TTTAGTCAATATTTGGCAAT+GGG - chr1_1:13566641-13566660 None:intergenic 25.0%
! TTGGATGTTTAGTCAATATT+TGG - chr1_1:13566648-13566667 None:intergenic 25.0%
! TTTCATGAAAAAATTGTGCT+TGG - chr1_1:13566667-13566686 None:intergenic 25.0%
!! TTTTCTTGAATATCTGTTGT+AGG + chr1_1:13566757-13566776 Msa0009290:intron 25.0%
!!! TAACTTGTTTTTTCCAATCA+AGG + chr1_1:13566944-13566963 Msa0009290:intron 25.0%
! TCCAATAAAAATTCATCAAC+TGG + chr1_1:13566988-13567007 Msa0009290:intron 25.0%
!!! ACCAGTTGATGAATTTTTAT+TGG - chr1_1:13566992-13567011 None:intergenic 25.0%
!!! TGTAGTTTTTTTACTTAAGG+TGG + chr1_1:13567158-13567177 Msa0009290:intron 25.0%
!!! TTTTTTTACTTAAGGTGGTA+TGG + chr1_1:13567163-13567182 Msa0009290:intron 25.0%
! ATTGAATAAATATCGTGATG+GGG - chr1_1:13567326-13567345 None:intergenic 25.0%
! CAATTGAATAAATATCGTGA+TGG - chr1_1:13567328-13567347 None:intergenic 25.0%
!! TCAATTGATTCATGATCTTA+AGG + chr1_1:13567358-13567377 Msa0009290:three_prime_UTR 25.0%
! ATTCTACAAATTGACATAAG+GGG - chr1_1:13567460-13567479 None:intergenic 25.0%
! CATTCTACAAATTGACATAA+GGG - chr1_1:13567461-13567480 None:intergenic 25.0%
!!! AGTTGATAAAGAAGTTGTTA+AGG + chr1_1:13568019-13568038 Msa0009290:three_prime_UTR 25.0%
!! GTTGATAAAGAAGTTGTTAA+GGG + chr1_1:13568020-13568039 Msa0009290:three_prime_UTR 25.0%
! AAACTAAAAATTACCTCACT+TGG - chr1_1:13569076-13569095 None:intergenic 25.0%
!!! CGAAAACTTTTTCTATGTTT+TGG + chr1_1:13569152-13569171 Msa0009290:intron 25.0%
! CAGTTATAACATATTACTCT+AGG - chr1_1:13569389-13569408 None:intergenic 25.0%
! CTAGAGTAATATGTTATAAC+TGG + chr1_1:13569387-13569406 Msa0009290:intron 25.0%
! TACTTGTATATTTCCTTCTA+AGG + chr1_1:13569667-13569686 Msa0009290:intron 25.0%
! ACAAAATATGCATACATACA+AGG + chr1_1:13570547-13570566 Msa0009290:intron 25.0%
! AATTATTCAAATCTAACCTG+AGG - chr1_1:13570866-13570885 None:intergenic 25.0%
!!! ATTGTTTTTTCACTTGTCAT+AGG + chr1_1:13570883-13570902 Msa0009290:intron 25.0%
!! GAGATGATTTGTAGATAAAT+TGG + chr1_1:13571280-13571299 Msa0009290:intron 25.0%
! CTAATGCTATATACATTACA+TGG + chr1_1:13571306-13571325 Msa0009290:intron 25.0%
!! AATGGTGAATGTTACATTTT+AGG + chr1_1:13571832-13571851 Msa0009290:three_prime_UTR 25.0%
! TGTTGTTCATAGTTCTTATT+TGG + chr1_1:13571982-13572001 Msa0009290:three_prime_UTR 25.0%
!!! TGTAACTTGTGCTTATTTTA+AGG - chr1_1:13572210-13572229 None:intergenic 25.0%
TTCTCTTTCGTTAACGTTTA+CGG + chr1_1:13559981-13560000 Msa0009290:CDS 30.0%
TTACTTATAGCGTTTATCTG+AGG - chr1_1:13560018-13560037 None:intergenic 30.0%
CAAGAATCTTTATCAAAAGC+CGG - chr1_1:13560258-13560277 None:intergenic 30.0%
! GCTTTTGATAAAGATTCTTG+TGG + chr1_1:13560258-13560277 Msa0009290:CDS 30.0%
GTGATTAAAAAAACGATGTC+TGG + chr1_1:13560431-13560450 Msa0009290:intron 30.0%
TATATAGGTAACTGATGCTT+TGG + chr1_1:13560612-13560631 Msa0009290:intron 30.0%
TTTGAGTGATTGATTGATGT+TGG + chr1_1:13560911-13560930 Msa0009290:intron 30.0%
ATCATCAAACATAGTTTAGG+AGG - chr1_1:13561241-13561260 None:intergenic 30.0%
TCCCACAATTATTTACAAAC+TGG + chr1_1:13561291-13561310 Msa0009290:intron 30.0%
TTGTGTCAATTAAATTGGGA+CGG - chr1_1:13561379-13561398 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr1_1:13561427-13561446 Msa0009290:intron 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + chr1_1:13561530-13561549 Msa0009290:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + chr1_1:13561531-13561550 Msa0009290:intron 30.0%
AGAAAATGAGTCAGTTATTC+CGG + chr1_1:13561566-13561585 Msa0009290:intron 30.0%
CCAAAATCCAAATATGAAGA+AGG - chr1_1:13561705-13561724 None:intergenic 30.0%
! CCTTCTTCATATTTGGATTT+TGG + chr1_1:13561702-13561721 Msa0009290:intron 30.0%
!!! AGCATTTTCTAAAACCAAAC+AGG - chr1_1:13561742-13561761 None:intergenic 30.0%
AAGTATGGTATGCTAAAGTA+TGG - chr1_1:13562145-13562164 None:intergenic 30.0%
ACTACAAGGATAATAGCAAA+AGG - chr1_1:13562433-13562452 None:intergenic 30.0%
CTATTATCCTTGTAGTGATT+TGG + chr1_1:13562437-13562456 Msa0009290:intron 30.0%
!!! ACTACTTTGCTTTTTGCTTA+AGG + chr1_1:13562475-13562494 Msa0009290:intron 30.0%
! TTCTGACTCAAAAGTTGATT+TGG + chr1_1:13562619-13562638 Msa0009290:CDS 30.0%
!! AAAAGTTGATTTGGAGAAAC+AGG + chr1_1:13562628-13562647 Msa0009290:CDS 30.0%
TGGGGAATAAATGATTGAAT+TGG + chr1_1:13562662-13562681 Msa0009290:intron 30.0%
GGGGAATAAATGATTGAATT+GGG + chr1_1:13562663-13562682 Msa0009290:intron 30.0%
ATGAGTTAGACATAATATCC+TGG + chr1_1:13562736-13562755 Msa0009290:intron 30.0%
CAAAGTAGAGTTTATTGCTA+TGG + chr1_1:13562760-13562779 Msa0009290:intron 30.0%
GAGTTTATTGCTATGGAAAA+AGG + chr1_1:13562767-13562786 Msa0009290:intron 30.0%
ACTTGCAGATGTACATATTA+AGG + chr1_1:13562853-13562872 Msa0009290:intron 30.0%
ATATCTGTTCACTTTCATCT+AGG + chr1_1:13562940-13562959 Msa0009290:CDS 30.0%
! TACAGGACTGTTATTTACAA+AGG + chr1_1:13563067-13563086 Msa0009290:intron 30.0%
AATGGGCAAAATATTTACCA+GGG - chr1_1:13563167-13563186 None:intergenic 30.0%
! TAATGGGCAAAATATTTACC+AGG - chr1_1:13563168-13563187 None:intergenic 30.0%
TCAAATAGTAATCAAGGAAG+CGG - chr1_1:13563318-13563337 None:intergenic 30.0%
!! TACTATTTGATTTTGGATGC+TGG + chr1_1:13563328-13563347 Msa0009290:three_prime_UTR 30.0%
AATTTCTTCAGAGTTGTGAA+GGG + chr1_1:13563447-13563466 Msa0009290:three_prime_UTR 30.0%
AATAATCACTTTGGTGAAAG+TGG + chr1_1:13563470-13563489 Msa0009290:three_prime_UTR 30.0%
ATATGTTTATATCGAAGTGC+TGG + chr1_1:13563527-13563546 Msa0009290:three_prime_UTR 30.0%
!! GAAAGTATTTGTAGAGAATC+GGG - chr1_1:13563645-13563664 None:intergenic 30.0%
!! GGAAAGTATTTGTAGAGAAT+CGG - chr1_1:13563646-13563665 None:intergenic 30.0%
ATAGTATTCATTTGTAAGGG+TGG - chr1_1:13563791-13563810 None:intergenic 30.0%
AAATAGTAGACATTGTCTGT+TGG + chr1_1:13563868-13563887 Msa0009290:intron 30.0%
TGATGACATTAGTTGAACAA+TGG - chr1_1:13563948-13563967 None:intergenic 30.0%
TCATCATAGTTGATTATGCA+TGG + chr1_1:13563962-13563981 Msa0009290:intron 30.0%
CATCATAGTTGATTATGCAT+GGG + chr1_1:13563963-13563982 Msa0009290:intron 30.0%
TGTAGATATATCAGCTAATC+TGG + chr1_1:13564042-13564061 Msa0009290:intron 30.0%
!! AAAGAAGTTTTTACCGATTG+TGG + chr1_1:13564137-13564156 Msa0009290:three_prime_UTR 30.0%
AATTTACATGAGATAAGAGC+TGG - chr1_1:13564431-13564450 None:intergenic 30.0%
ATATACTAGCATGTATCAAG+AGG - chr1_1:13564477-13564496 None:intergenic 30.0%
!! CAATGAGTATTGCTCTTTTA+AGG - chr1_1:13564745-13564764 None:intergenic 30.0%
CTTAAAAGAGCAATACTCAT+TGG + chr1_1:13564743-13564762 Msa0009290:three_prime_UTR 30.0%
ATGGAAAATATGGGAATTCA+AGG + chr1_1:13564981-13565000 Msa0009290:three_prime_UTR 30.0%
ATTGGAAGAATTACACAGTA+CGG - chr1_1:13565045-13565064 None:intergenic 30.0%
AACTTCATTTGTGAATATGG+TGG - chr1_1:13565072-13565091 None:intergenic 30.0%
TCTACAGAATACCTACATAA+AGG - chr1_1:13565115-13565134 None:intergenic 30.0%
TAGGTATTCTGTAGAATCAT+TGG + chr1_1:13565120-13565139 Msa0009290:intron 30.0%
! ATTTCCTTAGTGGATAAAAG+GGG - chr1_1:13565403-13565422 None:intergenic 30.0%
! CATTTCCTTAGTGGATAAAA+GGG - chr1_1:13565404-13565423 None:intergenic 30.0%
!!! CAAGTGTTTTAACTAGATGT+TGG - chr1_1:13565742-13565761 None:intergenic 30.0%
CTGCTAGTGAAATTGTTAAA+CGG + chr1_1:13566434-13566453 Msa0009290:three_prime_UTR 30.0%
!!! TTTTTTTTCTTACCCAAAGG+AGG + chr1_1:13566591-13566610 Msa0009290:intron 30.0%
!!! TTTTTTTCTTACCCAAAGGA+GGG + chr1_1:13566592-13566611 Msa0009290:intron 30.0%
GTTTAGTCAATATTTGGCAA+TGG - chr1_1:13566642-13566661 None:intergenic 30.0%
TGATGAACTTCAGATAAAGA+TGG + chr1_1:13566906-13566925 Msa0009290:three_prime_UTR 30.0%
ACAAGTTAAACCAATTACCT+GGG - chr1_1:13566932-13566951 None:intergenic 30.0%
AACAAGTTAAACCAATTACC+TGG - chr1_1:13566933-13566952 None:intergenic 30.0%
AAAAGGACAATAACCTTGAT+TGG - chr1_1:13566960-13566979 None:intergenic 30.0%
TTTATTGGAAGCTGAGTAAA+AGG - chr1_1:13566977-13566996 None:intergenic 30.0%
GCATTCTACAAATTGACATA+AGG - chr1_1:13567462-13567481 None:intergenic 30.0%
! GTTTAGAACAGTCAATGAAA+TGG + chr1_1:13567974-13567993 Msa0009290:three_prime_UTR 30.0%
!! TTGCTTTTGAACACAGTATT+GGG - chr1_1:13568117-13568136 None:intergenic 30.0%
TACATTGGTAAAGGATTATC+AGG + chr1_1:13568410-13568429 Msa0009290:three_prime_UTR 30.0%
CAATTAAGATGTTGTCTTTG+GGG - chr1_1:13568478-13568497 None:intergenic 30.0%
CCAATTAAGATGTTGTCTTT+GGG - chr1_1:13568479-13568498 None:intergenic 30.0%
AAGAGGACATTATTACTCTT+AGG + chr1_1:13568780-13568799 Msa0009290:three_prime_UTR 30.0%
TCTTCTTCCTAAATTTGTCA+AGG + chr1_1:13568874-13568893 Msa0009290:three_prime_UTR 30.0%
TGCCTTACATTTATTGGATA+TGG + chr1_1:13569178-13569197 Msa0009290:intron 30.0%
TGCCATATCCAATAAATGTA+AGG - chr1_1:13569183-13569202 None:intergenic 30.0%
!! GGTATATTTCTTAGTTTGTG+TGG + chr1_1:13569230-13569249 Msa0009290:intron 30.0%
TCTTTGAATATCATATCTGC+AGG + chr1_1:13569416-13569435 Msa0009290:intron 30.0%
!! TATTTCCTTCTAAGGTTGTT+TGG + chr1_1:13569675-13569694 Msa0009290:intron 30.0%
TACACTAGCTCATTAAATTC+CGG - chr1_1:13569773-13569792 None:intergenic 30.0%
ATGAGCTAGTGTATCAAAAT+AGG + chr1_1:13569780-13569799 Msa0009290:three_prime_UTR 30.0%
!!! TAGTTGTGTTTTTGTTTCTG+TGG + chr1_1:13570036-13570055 Msa0009290:intron 30.0%
TGCAGATCAGCTAAATAAAA+TGG + chr1_1:13570234-13570253 Msa0009290:three_prime_UTR 30.0%
GCAGATCAGCTAAATAAAAT+GGG + chr1_1:13570235-13570254 Msa0009290:three_prime_UTR 30.0%
! ACTTTGTCAGTTTTCATGTT+TGG - chr1_1:13570322-13570341 None:intergenic 30.0%
AAACATGAAAACTGACAAAG+TGG + chr1_1:13570321-13570340 Msa0009290:three_prime_UTR 30.0%
ACAAAGTGGATATAGTTCAA+AGG + chr1_1:13570335-13570354 Msa0009290:three_prime_UTR 30.0%
! TGAGGAAGGAATAAATTTTG+TGG + chr1_1:13570375-13570394 Msa0009290:three_prime_UTR 30.0%
! TTTGCTTGATAGCAATTTAC+AGG + chr1_1:13570676-13570695 Msa0009290:three_prime_UTR 30.0%
AAAAGATCCTAGAACATATG+AGG + chr1_1:13571006-13571025 Msa0009290:three_prime_UTR 30.0%
GATGAAAATGGAGTTGTTAA+AGG + chr1_1:13571052-13571071 Msa0009290:three_prime_UTR 30.0%
! ATTTAAAATACTTACCGCCT+CGG - chr1_1:13571203-13571222 None:intergenic 30.0%
! TGAAAGCATAAATTGAACAC+TGG - chr1_1:13571403-13571422 None:intergenic 30.0%
TTATTATGTGCACTTGCTTT+AGG - chr1_1:13571802-13571821 None:intergenic 30.0%
! TGTTACATTTTAGGCATTCT+TGG + chr1_1:13571841-13571860 Msa0009290:three_prime_UTR 30.0%
! TTTGGATTTTATTGTTGGGA+AGG + chr1_1:13572000-13572019 Msa0009290:three_prime_UTR 30.0%
TGGAAATCAAATGTACAGTT+TGG + chr1_1:13572043-13572062 Msa0009290:three_prime_UTR 30.0%
!! AGTGTTTTTGTTCTATCTGA+TGG + chr1_1:13572115-13572134 Msa0009290:three_prime_UTR 30.0%
!! GTGTTTTTGTTCTATCTGAT+GGG + chr1_1:13572116-13572135 Msa0009290:three_prime_UTR 30.0%
! TATATTTCTGCATTGTGCTT+AGG + chr1_1:13572183-13572202 Msa0009290:three_prime_UTR 30.0%
TTTGGAGAGGATTCAGTTAT+GGG + chr1_1:13560140-13560159 Msa0009290:CDS 35.0%
!! GGATTTGTTGCTGAATTGAA+CGG + chr1_1:13560285-13560304 Msa0009290:intron 35.0%
! TCTGATTGAAAGTGTATGTC+AGG + chr1_1:13560384-13560403 Msa0009290:intron 35.0%
ATGTCAGGTGTTTCAGTATT+TGG + chr1_1:13560544-13560563 Msa0009290:intron 35.0%
TAAACAAAAAACGTGCCTCT+TGG - chr1_1:13560735-13560754 None:intergenic 35.0%
AAGTATATACTGCTACTACC+TGG - chr1_1:13561092-13561111 None:intergenic 35.0%
GAAAATGAGTCAGTTATTCC+GGG + chr1_1:13561567-13561586 Msa0009290:intron 35.0%
ATGGACTTCGAGAAATATTG+TGG + chr1_1:13561637-13561656 Msa0009290:intron 35.0%
!! GGATTTTGGGTGTATTTCTT+AGG + chr1_1:13561716-13561735 Msa0009290:intron 35.0%
AAAGAAGCTGATGATTGCAA+TGG + chr1_1:13561942-13561961 Msa0009290:CDS 35.0%
AAGAAGCTGATGATTGCAAT+GGG + chr1_1:13561943-13561962 Msa0009290:CDS 35.0%
AAAATCCACAACCTGTAACA+AGG - chr1_1:13561973-13561992 None:intergenic 35.0%
TCTTACCTAAATCCGATAGT+CGG + chr1_1:13562033-13562052 Msa0009290:CDS 35.0%
ATAGCATAAACAAGGCTAGA+AGG - chr1_1:13562390-13562409 None:intergenic 35.0%
TAGAAGACCAAATCACTACA+AGG - chr1_1:13562447-13562466 None:intergenic 35.0%
AGAAACACTTGTTCTATCAC+TGG - chr1_1:13562590-13562609 None:intergenic 35.0%
!! TCAACTTTTGAGTCAGAACT+TGG - chr1_1:13562617-13562636 None:intergenic 35.0%
CAATAAACTCTACTTTGACC+AGG - chr1_1:13562757-13562776 None:intergenic 35.0%
CATATTAAGGAAGCTAAGCA+TGG + chr1_1:13562866-13562885 Msa0009290:CDS 35.0%
ACGATTCTTCAATTCTGTAC+AGG + chr1_1:13563050-13563069 Msa0009290:intron 35.0%
GAGGAAGAAGATGAGTTAAT+GGG - chr1_1:13563184-13563203 None:intergenic 35.0%
ATTAGATGCAATGGTTGAGT+TGG + chr1_1:13563351-13563370 Msa0009290:three_prime_UTR 35.0%
CAATTTCTTCAGAGTTGTGA+AGG + chr1_1:13563446-13563465 Msa0009290:three_prime_UTR 35.0%
TGTGAAGGGAATAATCACTT+TGG + chr1_1:13563461-13563480 Msa0009290:three_prime_UTR 35.0%
TACAAATACTTTCCCTAGCT+GGG + chr1_1:13563652-13563671 Msa0009290:three_prime_UTR 35.0%
TAATCCATTTCACCAACAGT+GGG - chr1_1:13563845-13563864 None:intergenic 35.0%
TTAATCCATTTCACCAACAG+TGG - chr1_1:13563846-13563865 None:intergenic 35.0%
TGGACACTTTCTACTTTAGA+GGG - chr1_1:13563922-13563941 None:intergenic 35.0%
TTGGACACTTTCTACTTTAG+AGG - chr1_1:13563923-13563942 None:intergenic 35.0%
! CATTAGTTGAACAATGGACT+TGG - chr1_1:13563942-13563961 None:intergenic 35.0%
TTGATTATGCATGGGCTTAA+CGG + chr1_1:13563971-13563990 Msa0009290:intron 35.0%
!!! TCACTGCTTTTTGATTGAAG+TGG + chr1_1:13564019-13564038 Msa0009290:intron 35.0%
! GCTAATCTGGTGTATTTTGT+AGG + chr1_1:13564055-13564074 Msa0009290:intron 35.0%
!! TTTGTTAGCTTGCTAAACTC+TGG + chr1_1:13564200-13564219 Msa0009290:intron 35.0%
TATTACTGAATCATGACGCA+TGG + chr1_1:13564226-13564245 Msa0009290:intron 35.0%
ATCATCATCATAACAGCTTC+TGG - chr1_1:13564317-13564336 None:intergenic 35.0%
CATAAAATGCTTTACGCTGA+GGG - chr1_1:13564373-13564392 None:intergenic 35.0%
TCATAAAATGCTTTACGCTG+AGG - chr1_1:13564374-13564393 None:intergenic 35.0%
! TGAATACTATTCAGCTCTGA+TGG + chr1_1:13564391-13564410 Msa0009290:three_prime_UTR 35.0%
TCAAGAGGAAAATAGAAGTG+TGG - chr1_1:13564462-13564481 None:intergenic 35.0%
ATCTTGGAGCTACATTAGAT+AGG + chr1_1:13564547-13564566 Msa0009290:three_prime_UTR 35.0%
GTTATAATGGCAAGTGAAGT+TGG + chr1_1:13564615-13564634 Msa0009290:three_prime_UTR 35.0%
CATTAGACAGCTGTTATTCA+TGG - chr1_1:13564950-13564969 None:intergenic 35.0%
!! TGTGAATATGGTGGATAGAT+TGG - chr1_1:13565063-13565082 None:intergenic 35.0%
ATTGTTGCTCTCCTTTATGT+AGG + chr1_1:13565101-13565120 Msa0009290:intron 35.0%
CTATTAGACATGACAGCTAA+TGG - chr1_1:13565211-13565230 None:intergenic 35.0%
! GTGACTATTTTCTCTCGAAT+AGG - chr1_1:13565298-13565317 None:intergenic 35.0%
! CCATTTCCTTAGTGGATAAA+AGG - chr1_1:13565405-13565424 None:intergenic 35.0%
! CCTTTTATCCACTAAGGAAA+TGG + chr1_1:13565402-13565421 Msa0009290:three_prime_UTR 35.0%
ATTACTTACTCAAAGGAACG+TGG + chr1_1:13565475-13565494 Msa0009290:three_prime_UTR 35.0%
ACCTCTATCAGAAAGAACAA+GGG - chr1_1:13565575-13565594 None:intergenic 35.0%
TACCTCTATCAGAAAGAACA+AGG - chr1_1:13565576-13565595 None:intergenic 35.0%
ATTAGGTGAATGTGGCTATA+TGG - chr1_1:13565636-13565655 None:intergenic 35.0%
!!! GTGTTTTAACTAGATGTTGG+TGG - chr1_1:13565739-13565758 None:intergenic 35.0%
TGATGCTATATGCCCATATT+TGG + chr1_1:13565844-13565863 Msa0009290:three_prime_UTR 35.0%
! TTGAAATCACCACTTGCTTT+TGG - chr1_1:13565914-13565933 None:intergenic 35.0%
TTTCAACTCACATGATGAGT+TGG + chr1_1:13565928-13565947 Msa0009290:three_prime_UTR 35.0%
TATTTCAAAGCAAGCACCTA+TGG + chr1_1:13565959-13565978 Msa0009290:three_prime_UTR 35.0%
AAGAACCTTCATCATTCCAT+AGG - chr1_1:13565978-13565997 None:intergenic 35.0%
CAAAGTAGATATTCCCATCT+TGG - chr1_1:13566002-13566021 None:intergenic 35.0%
CAAGATGGGAATATCTACTT+TGG + chr1_1:13566000-13566019 Msa0009290:three_prime_UTR 35.0%
TCTACTTTGGCCTCATATAA+AGG + chr1_1:13566013-13566032 Msa0009290:three_prime_UTR 35.0%
TATCTGAGCACCTTTATATG+AGG - chr1_1:13566026-13566045 None:intergenic 35.0%
TTCTCCAATGATAATCTCCA+GGG - chr1_1:13566225-13566244 None:intergenic 35.0%
TTTCTCCAATGATAATCTCC+AGG - chr1_1:13566226-13566245 None:intergenic 35.0%
GGAGATTATCATTGGAGAAA+AGG + chr1_1:13566226-13566245 Msa0009290:three_prime_UTR 35.0%
GATTATCATTGGAGAAAAGG+TGG + chr1_1:13566229-13566248 Msa0009290:three_prime_UTR 35.0%
GTTCAATTCATGAATGGTCT+TGG - chr1_1:13566341-13566360 None:intergenic 35.0%
GACCATTCATGAATTGAACA+AGG + chr1_1:13566342-13566361 Msa0009290:three_prime_UTR 35.0%
!! AGCCTTGTTCAATTCATGAA+TGG - chr1_1:13566347-13566366 None:intergenic 35.0%
TTGCTGCATCTTTAAACTTC+AGG - chr1_1:13566387-13566406 None:intergenic 35.0%
GTTTAAAGATGCAGCAAGTA+AGG + chr1_1:13566390-13566409 Msa0009290:three_prime_UTR 35.0%
CGTTTAACAATTTCACTAGC+AGG - chr1_1:13566436-13566455 None:intergenic 35.0%
! ATTGTTAAACGGTTTTGCAC+TGG + chr1_1:13566445-13566464 Msa0009290:three_prime_UTR 35.0%
! TTGTTAAACGGTTTTGCACT+GGG + chr1_1:13566446-13566465 Msa0009290:three_prime_UTR 35.0%
GAGTTATGGGTCAATATCAT+TGG + chr1_1:13566474-13566493 Msa0009290:three_prime_UTR 35.0%
TTATGGGTCAATATCATTGG+AGG + chr1_1:13566477-13566496 Msa0009290:three_prime_UTR 35.0%
TAAGTTTGACAAACCTGTGT+TGG - chr1_1:13566548-13566567 None:intergenic 35.0%
!!! TTTTTTCTTACCCAAAGGAG+GGG + chr1_1:13566593-13566612 Msa0009290:intron 35.0%
TTGAATATCTGTTGTAGGTG+AGG + chr1_1:13566762-13566781 Msa0009290:intron 35.0%
TGAATATCTGTTGTAGGTGA+GGG + chr1_1:13566763-13566782 Msa0009290:intron 35.0%
GAAGTTCATCAGCATTTGTA+AGG - chr1_1:13566897-13566916 None:intergenic 35.0%
!!! CGAAACCTACGTTTTTTCTT+TGG + chr1_1:13567119-13567138 Msa0009290:intron 35.0%
ACGTTATTGTTGTAATCCTC+AGG + chr1_1:13567196-13567215 Msa0009290:intron 35.0%
CGTTATTGTTGTAATCCTCA+GGG + chr1_1:13567197-13567216 Msa0009290:intron 35.0%
TGTTCGACTGTTGGAAAAAT+AGG + chr1_1:13567412-13567431 Msa0009290:intron 35.0%
ATTGCTAGTGGAGTTGTTAA+AGG + chr1_1:13567537-13567556 Msa0009290:three_prime_UTR 35.0%
ATTAGCAACCAATGTTTGGT+GGG - chr1_1:13567670-13567689 None:intergenic 35.0%
GCAAATTTCTCTCTAAGTAC+TGG - chr1_1:13567879-13567898 None:intergenic 35.0%
GTACTTAGAGAGAAATTTGC+TGG + chr1_1:13567879-13567898 Msa0009290:three_prime_UTR 35.0%
AAGAAGTTAATAACGTGCTC+AGG - chr1_1:13567909-13567928 None:intergenic 35.0%
AGAGAAATTATGTCCCAACT+TGG + chr1_1:13567951-13567970 Msa0009290:three_prime_UTR 35.0%
GAGAAATTATGTCCCAACTT+GGG + chr1_1:13567952-13567971 Msa0009290:three_prime_UTR 35.0%
AGAACAGTCAATGAAATGGT+TGG + chr1_1:13567978-13567997 Msa0009290:three_prime_UTR 35.0%
!! CTTGCTTTTGAACACAGTAT+TGG - chr1_1:13568118-13568137 None:intergenic 35.0%
TGTGTTCAAAAGCAAGATCA+TGG + chr1_1:13568122-13568141 Msa0009290:three_prime_UTR 35.0%
TCAAAAGCAAGATCATGGTT+TGG + chr1_1:13568127-13568146 Msa0009290:three_prime_UTR 35.0%
! ATCGGTGTTTCAATGTATAC+TGG - chr1_1:13568212-13568231 None:intergenic 35.0%
! ACTAAGAGGTACAATTTAGC+TGG + chr1_1:13568278-13568297 Msa0009290:three_prime_UTR 35.0%
ACCATCCATATCCAATTTAC+TGG + chr1_1:13568314-13568333 Msa0009290:three_prime_UTR 35.0%
ACCAGTAAATTGGATATGGA+TGG - chr1_1:13568318-13568337 None:intergenic 35.0%
CACTACCAGTAAATTGGATA+TGG - chr1_1:13568322-13568341 None:intergenic 35.0%
AGCAATGACTACATTGGTAA+AGG + chr1_1:13568401-13568420 Msa0009290:three_prime_UTR 35.0%
ATTGGTAAAGGATTATCAGG+TGG + chr1_1:13568413-13568432 Msa0009290:three_prime_UTR 35.0%
GTTGTAGTATATCCTCCAAA+AGG + chr1_1:13568440-13568459 Msa0009290:three_prime_UTR 35.0%
! TCAAAATTGCTTCCTTTTGG+AGG - chr1_1:13568455-13568474 None:intergenic 35.0%
CCCAAAGACAACATCTTAAT+TGG + chr1_1:13568476-13568495 Msa0009290:three_prime_UTR 35.0%
GCCAATTAAGATGTTGTCTT+TGG - chr1_1:13568480-13568499 None:intergenic 35.0%
CAACATCTTAATTGGCAATG+TGG + chr1_1:13568484-13568503 Msa0009290:three_prime_UTR 35.0%
! AGATTTTGTGTGCGTAATTC+TGG + chr1_1:13568560-13568579 Msa0009290:three_prime_UTR 35.0%
! GATTTTGTGTGCGTAATTCT+GGG + chr1_1:13568561-13568580 Msa0009290:three_prime_UTR 35.0%
! ATTTTGTGTGCGTAATTCTG+GGG + chr1_1:13568562-13568581 Msa0009290:three_prime_UTR 35.0%
! AGTTTTCCCAAGAACAACAA+CGG - chr1_1:13568645-13568664 None:intergenic 35.0%
AAAATCAACAAGCACTTCCT+TGG - chr1_1:13568849-13568868 None:intergenic 35.0%
TTTGAATGAGAAACCAAGTG+AGG + chr1_1:13569060-13569079 Msa0009290:three_prime_UTR 35.0%
!!! TTTTTTTCCCTCTTAGCTTC+AGG + chr1_1:13569253-13569272 Msa0009290:intron 35.0%
ACTGATGCTGTTAAACATAG+AGG + chr1_1:13569462-13569481 Msa0009290:three_prime_UTR 35.0%
AAAATTCTGGATGTCCTCTT+GGG + chr1_1:13569738-13569757 Msa0009290:three_prime_UTR 35.0%
AGCTAGTGTATCAAAATAGG+TGG + chr1_1:13569783-13569802 Msa0009290:three_prime_UTR 35.0%
CAGGATTCTCAATAATACCA+AGG - chr1_1:13569898-13569917 None:intergenic 35.0%
TGAATGTGCTATCATTGACA+AGG + chr1_1:13569934-13569953 Msa0009290:three_prime_UTR 35.0%
! TATCATTGACAAGGCTTTTG+AGG + chr1_1:13569943-13569962 Msa0009290:three_prime_UTR 35.0%
AGAAAAAGAGTAGCCATTGT+TGG + chr1_1:13570187-13570206 Msa0009290:intron 35.0%
TTTGAAAGAGCTGATCGTAT+TGG + chr1_1:13570274-13570293 Msa0009290:three_prime_UTR 35.0%
TTGGAACTCCATACATCATA+AGG - chr1_1:13570303-13570322 None:intergenic 35.0%
TTTGTGGTGAATGCAAACAT+TGG + chr1_1:13570391-13570410 Msa0009290:three_prime_UTR 35.0%
TTGTGGTGAATGCAAACATT+GGG + chr1_1:13570392-13570411 Msa0009290:three_prime_UTR 35.0%
! AGTCGTTCAAGAGAGTATAA+AGG - chr1_1:13570424-13570443 None:intergenic 35.0%
! ACAAAGTTACGTTTTCATGC+AGG + chr1_1:13570579-13570598 Msa0009290:intron 35.0%
! CAAAGTTACGTTTTCATGCA+GGG + chr1_1:13570580-13570599 Msa0009290:intron 35.0%
! CTTGATAGCAATTTACAGGA+TGG + chr1_1:13570680-13570699 Msa0009290:three_prime_UTR 35.0%
! CAAATTTAGTTTCCGCTTCT+TGG - chr1_1:13570985-13571004 None:intergenic 35.0%
CAAGAAGCGGAAACTAAATT+TGG + chr1_1:13570983-13571002 Msa0009290:three_prime_UTR 35.0%
AGTTGTTAAAGGACTTGAAG+TGG + chr1_1:13571063-13571082 Msa0009290:three_prime_UTR 35.0%
! TTTAAAATACTTACCGCCTC+GGG - chr1_1:13571202-13571221 None:intergenic 35.0%
CAGACTATTGCAGAAAAGTT+GGG + chr1_1:13571480-13571499 Msa0009290:intron 35.0%
AGACAACAGATCAAACTTCA+AGG + chr1_1:13571512-13571531 Msa0009290:three_prime_UTR 35.0%
TCAAACTTCAAGGCTGATTA+TGG + chr1_1:13571522-13571541 Msa0009290:three_prime_UTR 35.0%
ATCAGGATGAATTTGTCAAG+AGG + chr1_1:13571694-13571713 Msa0009290:three_prime_UTR 35.0%
! ACATTTTAGGCATTCTTGGT+TGG + chr1_1:13571845-13571864 Msa0009290:three_prime_UTR 35.0%
TTTAGTGTAAGGAAAGCAAG+AGG + chr1_1:13571921-13571940 Msa0009290:three_prime_UTR 35.0%
!!! TCTTGGTTTTTGGTGGTATT+AGG + chr1_1:13571947-13571966 Msa0009290:three_prime_UTR 35.0%
!!! CTTGGTTTTTGGTGGTATTA+GGG + chr1_1:13571948-13571967 Msa0009290:three_prime_UTR 35.0%
!! CTAGCTTAGTTATGGTTTTG+TGG + chr1_1:13572023-13572042 Msa0009290:three_prime_UTR 35.0%
GTTTGGAGAGGATTCAGTTA+TGG + chr1_1:13560139-13560158 Msa0009290:CDS 40.0%
AGGATTCAGTTATGGGAATC+CGG + chr1_1:13560147-13560166 Msa0009290:CDS 40.0%
!! TAAAGTCCCATCGGTTTATC+CGG - chr1_1:13560231-13560250 None:intergenic 40.0%
GATAAAGATTCTTGTGGCGT+TGG + chr1_1:13560264-13560283 Msa0009290:intron 40.0%
CGGTCAAAGTAGTCGAAAAA+CGG + chr1_1:13560305-13560324 Msa0009290:intron 40.0%
AGTAGTCGAAAAACGGTTAG+AGG + chr1_1:13560312-13560331 Msa0009290:intron 40.0%
TGATGTGTCAGTGTTATGTC+AGG + chr1_1:13560529-13560548 Msa0009290:intron 40.0%
!! AACTGATGCTTTGGAGATGT+TGG + chr1_1:13560621-13560640 Msa0009290:CDS 40.0%
!! ATGCTTTGGAGATGTTGGTT+AGG + chr1_1:13560626-13560645 Msa0009290:CDS 40.0%
TTGGTTAGGATGACACATAG+AGG + chr1_1:13560640-13560659 Msa0009290:CDS 40.0%
TGTGGATGTGAAGCAAATAC+CGG + chr1_1:13560667-13560686 Msa0009290:CDS 40.0%
! GTGATTGATTGATGTTGGCT+TGG + chr1_1:13560916-13560935 Msa0009290:intron 40.0%
TATACTGCTACTACCTGGTT+GGG - chr1_1:13561087-13561106 None:intergenic 40.0%
ATATACTGCTACTACCTGGT+TGG - chr1_1:13561088-13561107 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG - chr1_1:13561376-13561395 None:intergenic 40.0%
GTGTATTTCTTAGGCCTGTT+TGG + chr1_1:13561725-13561744 Msa0009290:intron 40.0%
TTTCTCCGACTATCGGATTT+AGG - chr1_1:13562041-13562060 None:intergenic 40.0%
TAAATCCGATAGTCGGAGAA+AGG + chr1_1:13562040-13562059 Msa0009290:CDS 40.0%
AATTGCATGGTGTACTCAGA+TGG - chr1_1:13562359-13562378 None:intergenic 40.0%
! CACTTGTTCTATCACTGGTT+CGG - chr1_1:13562585-13562604 None:intergenic 40.0%
TAATATTCACCCAACTGAGC+TGG - chr1_1:13563103-13563122 None:intergenic 40.0%
ATGCAGATCTTGGCAATGAA+AGG + chr1_1:13563125-13563144 Msa0009290:CDS 40.0%
TGAAAGGTTTACGAGCTACA+TGG + chr1_1:13563141-13563160 Msa0009290:CDS 40.0%
GGAGGAAGAAGATGAGTTAA+TGG - chr1_1:13563185-13563204 None:intergenic 40.0%
! TTGTGGGAGTATAGAGTTAG+TGG - chr1_1:13563206-13563225 None:intergenic 40.0%
TATACTCCCACAAACAGCAT+AGG + chr1_1:13563213-13563232 Msa0009290:CDS 40.0%
! GTTGTTCCTATGCTGTTTGT+GGG - chr1_1:13563222-13563241 None:intergenic 40.0%
TCACTTTGGTGAAAGTGGAT+AGG + chr1_1:13563475-13563494 Msa0009290:three_prime_UTR 40.0%
CTACAAATACTTTCCCTAGC+TGG + chr1_1:13563651-13563670 Msa0009290:three_prime_UTR 40.0%
! ACACTTTCTACTTTAGAGGG+GGG - chr1_1:13563919-13563938 None:intergenic 40.0%
! GACACTTTCTACTTTAGAGG+GGG - chr1_1:13563920-13563939 None:intergenic 40.0%
! GGACACTTTCTACTTTAGAG+GGG - chr1_1:13563921-13563940 None:intergenic 40.0%
CAAGTTCCTTGCATTTCAGT+AGG - chr1_1:13564098-13564117 None:intergenic 40.0%
CTACTGAAATGCAAGGAACT+TGG + chr1_1:13564096-13564115 Msa0009290:three_prime_UTR 40.0%
GATGAATTTGCGTCCACAAT+CGG - chr1_1:13564153-13564172 None:intergenic 40.0%
GACGCAAATTCATCAGATTC+AGG + chr1_1:13564159-13564178 Msa0009290:three_prime_UTR 40.0%
CAGAATGAAGCAAAAACTCG+AGG - chr1_1:13564283-13564302 None:intergenic 40.0%
! CTCGAGTTTTTGCTTCATTC+TGG + chr1_1:13564281-13564300 Msa0009290:three_prime_UTR 40.0%
GGAGCTACATTAGATAGGAA+TGG + chr1_1:13564552-13564571 Msa0009290:three_prime_UTR 40.0%
AGGAAAGGAAGACTAAATCC+AGG + chr1_1:13564669-13564688 Msa0009290:three_prime_UTR 40.0%
!! TTTTCAAGCCAATCTCCGTA+GGG - chr1_1:13564774-13564793 None:intergenic 40.0%
AAAGCAGAAGATCGAACTGA+AGG + chr1_1:13564791-13564810 Msa0009290:three_prime_UTR 40.0%
TATGGGAATTCAAGGTTTGC+TGG + chr1_1:13564989-13565008 Msa0009290:three_prime_UTR 40.0%
! TGGCTCCATTGAAAGCTTTT+GGG + chr1_1:13565009-13565028 Msa0009290:three_prime_UTR 40.0%
ACGTACCCAAAAGCTTTCAA+TGG - chr1_1:13565017-13565036 None:intergenic 40.0%
GGAAATGCTATTACTTCCCA+TGG + chr1_1:13565141-13565160 Msa0009290:three_prime_UTR 40.0%
TTCTCTCGAATAGGATCGAT+CGG - chr1_1:13565289-13565308 None:intergenic 40.0%
AGTCACTTCTATGCGATGTA+TGG + chr1_1:13565312-13565331 Msa0009290:three_prime_UTR 40.0%
ACTTCTATGCGATGTATGGT+TGG + chr1_1:13565316-13565335 Msa0009290:three_prime_UTR 40.0%
! AAAGGGGACCTTTTAGTGAA+AGG - chr1_1:13565387-13565406 None:intergenic 40.0%
TCAAAGGAACGTGGTAAGAA+AGG + chr1_1:13565484-13565503 Msa0009290:three_prime_UTR 40.0%
CAAAGGAACGTGGTAAGAAA+GGG + chr1_1:13565485-13565504 Msa0009290:three_prime_UTR 40.0%
GCACACAATGCAATTAGTGA+AGG + chr1_1:13565541-13565560 Msa0009290:three_prime_UTR 40.0%
TCTATCAGAAAGAACAAGGG+TGG - chr1_1:13565572-13565591 None:intergenic 40.0%
ACCCTTGTTCTTTCTGATAG+AGG + chr1_1:13565571-13565590 Msa0009290:three_prime_UTR 40.0%
! AGCAACACGTTTCTTTGAGA+AGG - chr1_1:13565687-13565706 None:intergenic 40.0%
AACCAACAAGTGTGCAGAAA+TGG - chr1_1:13565817-13565836 None:intergenic 40.0%
!!! TTCTGCACACTTGTTGGTTT+TGG + chr1_1:13565818-13565837 Msa0009290:three_prime_UTR 40.0%
TTGCCTCTACAGCCAAATAT+GGG - chr1_1:13565859-13565878 None:intergenic 40.0%
ATTGCCTCTACAGCCAAATA+TGG - chr1_1:13565860-13565879 None:intergenic 40.0%
ATTTGGCTGTAGAGGCAATT+TGG + chr1_1:13565861-13565880 Msa0009290:three_prime_UTR 40.0%
!! AATCACCACTTGCTTTTGGT+GGG - chr1_1:13565910-13565929 None:intergenic 40.0%
!! AAATCACCACTTGCTTTTGG+TGG - chr1_1:13565911-13565930 None:intergenic 40.0%
AAGCACCTATGGAATGATGA+AGG + chr1_1:13565970-13565989 Msa0009290:three_prime_UTR 40.0%
ATGAAGGTTCTTGCCAAGAT+GGG + chr1_1:13565986-13566005 Msa0009290:three_prime_UTR 40.0%
! TGCTCAGATATTTGAAGCTC+TGG + chr1_1:13566036-13566055 Msa0009290:three_prime_UTR 40.0%
! GCTCAGATATTTGAAGCTCT+GGG + chr1_1:13566037-13566056 Msa0009290:three_prime_UTR 40.0%
!!! ATGAGTTGGCTTTTCCTTCT+CGG + chr1_1:13566158-13566177 Msa0009290:three_prime_UTR 40.0%
CAATGATAATCTCCAGGGTT+TGG - chr1_1:13566220-13566239 None:intergenic 40.0%
CAAACCCTGGAGATTATCAT+TGG + chr1_1:13566218-13566237 Msa0009290:three_prime_UTR 40.0%
TGAAGCTTTGCAATAGCAAG+TGG - chr1_1:13566274-13566293 None:intergenic 40.0%
TGCTATTGCAAAGCTTCAAG+AGG + chr1_1:13566276-13566295 Msa0009290:three_prime_UTR 40.0%
TGCTTCTACACTGTTAGTTC+TGG - chr1_1:13566305-13566324 None:intergenic 40.0%
GCAGGTTCAACTTCACTAAT+AGG - chr1_1:13566418-13566437 None:intergenic 40.0%
! TGTTAAACGGTTTTGCACTG+GGG + chr1_1:13566447-13566466 Msa0009290:three_prime_UTR 40.0%
GCAACGGCAATGAACAAAAT+TGG + chr1_1:13566514-13566533 Msa0009290:three_prime_UTR 40.0%
ACGGCAATGAACAAAATTGG+AGG + chr1_1:13566517-13566536 Msa0009290:three_prime_UTR 40.0%
CGGCAATGAACAAAATTGGA+GGG + chr1_1:13566518-13566537 Msa0009290:three_prime_UTR 40.0%
CATTTATGATCCCCTCCTTT+GGG - chr1_1:13566606-13566625 None:intergenic 40.0%
ACATTTATGATCCCCTCCTT+TGG - chr1_1:13566607-13566626 None:intergenic 40.0%
! TGCTTAATGGCACTCCTTTT+GGG - chr1_1:13566838-13566857 None:intergenic 40.0%
ATAAAGATGGCCCAGGTAAT+TGG + chr1_1:13566919-13566938 Msa0009290:intron 40.0%
CAGATGATGCTGTGACATAA+AGG + chr1_1:13567068-13567087 Msa0009290:intron 40.0%
!! TGTGACATAAAGGCACCTAT+GGG + chr1_1:13567078-13567097 Msa0009290:intron 40.0%
CCTCACCAAAGAAAAAACGT+AGG - chr1_1:13567127-13567146 None:intergenic 40.0%
!!! CCTACGTTTTTTCTTTGGTG+AGG + chr1_1:13567124-13567143 Msa0009290:intron 40.0%
CAATGTCTCCTATAACCTTG+TGG - chr1_1:13567256-13567275 None:intergenic 40.0%
TAGGAGACATTGCTATCACT+AGG + chr1_1:13567264-13567283 Msa0009290:three_prime_UTR 40.0%
ATCACTAGGAATTCAACAGC+CGG + chr1_1:13567278-13567297 Msa0009290:three_prime_UTR 40.0%
! GAATAAATATCGTGATGGGG+AGG - chr1_1:13567323-13567342 None:intergenic 40.0%
ATAAGGGGTCAAACACAAAC+AGG - chr1_1:13567445-13567464 None:intergenic 40.0%
! GTGAAACTAGTATCTGAAGC+AGG + chr1_1:13567504-13567523 Msa0009290:three_prime_UTR 40.0%
! TAGTATCTGAAGCAGGAGTT+GGG + chr1_1:13567511-13567530 Msa0009290:three_prime_UTR 40.0%
ACTCTTTATACCAGTCCATC+TGG - chr1_1:13567613-13567632 None:intergenic 40.0%
CATTAGCAACCAATGTTTGG+TGG - chr1_1:13567671-13567690 None:intergenic 40.0%
GGTCATTAGCAACCAATGTT+TGG - chr1_1:13567674-13567693 None:intergenic 40.0%
ACTAAAAACCGGAAGAGATG+TGG + chr1_1:13567728-13567747 Msa0009290:three_prime_UTR 40.0%
ATACTCTTCTGCACCAAGAA+GGG - chr1_1:13567763-13567782 None:intergenic 40.0%
TCTTGAGTAGCAATTCCAAC+AGG - chr1_1:13567855-13567874 None:intergenic 40.0%
! GACTGTTCTAAACCCAAGTT+GGG - chr1_1:13567967-13567986 None:intergenic 40.0%
! TGACTGTTCTAAACCCAAGT+TGG - chr1_1:13567968-13567987 None:intergenic 40.0%
CAACTTCGAGCATATCTGAA+CGG - chr1_1:13568004-13568023 None:intergenic 40.0%
!! TCCAATGCTGCTTTGGAAAA+GGG + chr1_1:13568182-13568201 Msa0009290:three_prime_UTR 40.0%
! ATCCAATTTACTGGTAGTGC+AGG + chr1_1:13568323-13568342 Msa0009290:three_prime_UTR 40.0%
AAAGGAATGCACCAAAGCTT+TGG - chr1_1:13568349-13568368 None:intergenic 40.0%
TCAAGTTCCAATGTGATTCC+AGG - chr1_1:13568374-13568393 None:intergenic 40.0%
GGAATCACATTGGAACTTGA+AGG + chr1_1:13568374-13568393 Msa0009290:three_prime_UTR 40.0%
GGTGATAGCAATGACTACAT+TGG + chr1_1:13568395-13568414 Msa0009290:three_prime_UTR 40.0%
! GGGTCAAAATTGCTTCCTTT+TGG - chr1_1:13568458-13568477 None:intergenic 40.0%
GTGGTGAGGCATATTTCAAT+GGG + chr1_1:13568525-13568544 Msa0009290:three_prime_UTR 40.0%
TGAGGCATATTTCAATGGGA+TGG + chr1_1:13568529-13568548 Msa0009290:three_prime_UTR 40.0%
! GTTGTTGTTCTTGGGAAAAC+TGG + chr1_1:13568644-13568663 Msa0009290:three_prime_UTR 40.0%
! ACTGGTAGAAATTTTGCTGC+AGG + chr1_1:13568662-13568681 Msa0009290:three_prime_UTR 40.0%
! AATTTTGCTGCAGGTATGAG+TGG + chr1_1:13568671-13568690 Msa0009290:three_prime_UTR 40.0%
AATCGCTTATGTTCTTGACG+TGG + chr1_1:13568697-13568716 Msa0009290:three_prime_UTR 40.0%
TGGATGGAAAATTCCAGTCT+CGG + chr1_1:13568717-13568736 Msa0009290:three_prime_UTR 40.0%
AGATCTGGATAAGGTTGAAG+AGG + chr1_1:13568757-13568776 Msa0009290:three_prime_UTR 40.0%
GGGAACACCTTGACAAATTT+AGG - chr1_1:13568884-13568903 None:intergenic 40.0%
! AATTTGTCAAGGTGTTCCCT+CGG + chr1_1:13568885-13568904 Msa0009290:three_prime_UTR 40.0%
!! TTTTGAAGAGCTCAAGAAGC+TGG + chr1_1:13569027-13569046 Msa0009290:three_prime_UTR 40.0%
TGGGACTGCCTTACATTTAT+TGG + chr1_1:13569172-13569191 Msa0009290:intron 40.0%
AATAGGACCTGAAGCTAAGA+GGG - chr1_1:13569263-13569282 None:intergenic 40.0%
AAATAGGACCTGAAGCTAAG+AGG - chr1_1:13569264-13569283 None:intergenic 40.0%
TAACCTGGTGAAAACTATGC+TGG + chr1_1:13569301-13569320 Msa0009290:intron 40.0%
AACCTGGTGAAAACTATGCT+GGG + chr1_1:13569302-13569321 Msa0009290:intron 40.0%
CAATCATTCAGGCGAACATT+AGG - chr1_1:13569528-13569547 None:intergenic 40.0%
CTAATGTTCGCCTGAATGAT+TGG + chr1_1:13569526-13569545 Msa0009290:three_prime_UTR 40.0%
! TGTGTTTTCAAAAGTGGACC+CGG - chr1_1:13569576-13569595 None:intergenic 40.0%
! GCAGACTGTGTTTTCAAAAG+TGG - chr1_1:13569582-13569601 None:intergenic 40.0%
! TGGTACTCCATTTTGTCATC+AGG + chr1_1:13569617-13569636 Msa0009290:three_prime_UTR 40.0%
! TACTCCATTTTGTCATCAGG+TGG + chr1_1:13569620-13569639 Msa0009290:intron 40.0%
! ACTCCATTTTGTCATCAGGT+GGG + chr1_1:13569621-13569640 Msa0009290:intron 40.0%
TGGTTCCAAACAACCTTAGA+AGG - chr1_1:13569683-13569702 None:intergenic 40.0%
GAAAATTCTGGATGTCCTCT+TGG + chr1_1:13569737-13569756 Msa0009290:three_prime_UTR 40.0%
TCCTCTTGGGAACAAAATAC+CGG + chr1_1:13569751-13569770 Msa0009290:three_prime_UTR 40.0%
AACAACTTTCCTGAGTTCAC+TGG + chr1_1:13569836-13569855 Msa0009290:three_prime_UTR 40.0%
ACAACTTTCCTGAGTTCACT+GGG + chr1_1:13569837-13569856 Msa0009290:three_prime_UTR 40.0%
!! ATTGACAAGGCTTTTGAGGA+GGG + chr1_1:13569947-13569966 Msa0009290:three_prime_UTR 40.0%
!! ATTGGTGGCCTTATGATGTA+TGG + chr1_1:13570292-13570311 Msa0009290:three_prime_UTR 40.0%
TCAAAGGCGAGTCAATCTAA+TGG + chr1_1:13570351-13570370 Msa0009290:three_prime_UTR 40.0%
! ATCAGGAGTTCATTTTGCCA+TGG + chr1_1:13570628-13570647 Msa0009290:three_prime_UTR 40.0%
GTTTGCATGAAGAAACTCCA+TGG - chr1_1:13570648-13570667 None:intergenic 40.0%
ATTGGAACATCCATTCGTCA+TGG + chr1_1:13570770-13570789 Msa0009290:three_prime_UTR 40.0%
TAATCAACACGGAATATGCG+AGG - chr1_1:13570956-13570975 None:intergenic 40.0%
!! CGCATATTCCGTGTTGATTA+TGG + chr1_1:13570956-13570975 Msa0009290:three_prime_UTR 40.0%
! CTTGGTGACCATAATCAACA+CGG - chr1_1:13570967-13570986 None:intergenic 40.0%
TGATTATGGTCACCAAGAAG+CGG + chr1_1:13570970-13570989 Msa0009290:three_prime_UTR 40.0%
GTGAGTACCTCATATGTTCT+AGG - chr1_1:13571016-13571035 None:intergenic 40.0%
! CATATGAGGTACTCACTAAG+AGG + chr1_1:13571020-13571039 Msa0009290:three_prime_UTR 40.0%
GTACTCACTAAGAGGTTTGT+GGG + chr1_1:13571028-13571047 Msa0009290:three_prime_UTR 40.0%
AGGTTTGTGGGAGATGAAAA+TGG + chr1_1:13571040-13571059 Msa0009290:three_prime_UTR 40.0%
TAAAGAAATTGAGGGCAGTG+AGG + chr1_1:13571129-13571148 Msa0009290:three_prime_UTR 40.0%
CATGGCTAGTAAAACTAGGT+CGG - chr1_1:13571167-13571186 None:intergenic 40.0%
!!! GACCTAGTTTTACTAGCCAT+GGG + chr1_1:13571166-13571185 Msa0009290:three_prime_UTR 40.0%
ATCCCATGGCTAGTAAAACT+AGG - chr1_1:13571171-13571190 None:intergenic 40.0%
TTAAAATACTTACCGCCTCG+GGG - chr1_1:13571201-13571220 None:intergenic 40.0%
! TTTTCTGCAATAGTCTGGCA+AGG - chr1_1:13571477-13571496 None:intergenic 40.0%
! CCAACTTTTCTGCAATAGTC+TGG - chr1_1:13571482-13571501 None:intergenic 40.0%
CCAGACTATTGCAGAAAAGT+TGG + chr1_1:13571479-13571498 Msa0009290:intron 40.0%
CAAACACACAGTGATGACTT+AGG + chr1_1:13571743-13571762 Msa0009290:three_prime_UTR 40.0%
!! CAAGAGGTTGTCTTGGTTTT+TGG + chr1_1:13571937-13571956 Msa0009290:three_prime_UTR 40.0%
TGGAGAGGAAGAGATGGTTA+GGG + chr1_1:13560094-13560113 Msa0009290:CDS 45.0%
TTAGGGACGAAATTGCGAAG+TGG + chr1_1:13560111-13560130 Msa0009290:CDS 45.0%
ATTCAGTTATGGGAATCCGG+TGG + chr1_1:13560150-13560169 Msa0009290:CDS 45.0%
! TTATGGGAATCCGGTGGATT+AGG + chr1_1:13560156-13560175 Msa0009290:CDS 45.0%
!! TATGGGAATCCGGTGGATTA+GGG + chr1_1:13560157-13560176 Msa0009290:CDS 45.0%
ACCGATGGGACTTTATGATC+CGG + chr1_1:13560236-13560255 Msa0009290:CDS 45.0%
GAAATGTCTGTGTCACACGA+TGG - chr1_1:13560366-13560385 None:intergenic 45.0%
!! ATGACACATAGAGGTGCTTG+TGG + chr1_1:13560649-13560668 Msa0009290:CDS 45.0%
TGTGAAGCAAATACCGGTGA+TGG + chr1_1:13560673-13560692 Msa0009290:CDS 45.0%
AAGTATACCAGCACCATCAC+CGG - chr1_1:13560689-13560708 None:intergenic 45.0%
!! TGATGGTGCTGGTATACTTG+TGG + chr1_1:13560690-13560709 Msa0009290:CDS 45.0%
! ATACTTGTGGCTTTGCCTCA+TGG + chr1_1:13560703-13560722 Msa0009290:CDS 45.0%
ATACTGCTACTACCTGGTTG+GGG - chr1_1:13561086-13561105 None:intergenic 45.0%
ATGAGTCAGTTATTCCGGGA+CGG + chr1_1:13561571-13561590 Msa0009290:intron 45.0%
! CAATGGGTTTGCCTTGTTAC+AGG + chr1_1:13561959-13561978 Msa0009290:CDS 45.0%
! GTTTGCCTTGTTACAGGTTG+TGG + chr1_1:13561965-13561984 Msa0009290:CDS 45.0%
! GATTTTCAGCTTCCTCCTCA+AGG + chr1_1:13561987-13562006 Msa0009290:CDS 45.0%
ACTGCATAGTTTCCTTGAGG+AGG - chr1_1:13562002-13562021 None:intergenic 45.0%
CCAACTGCATAGTTTCCTTG+AGG - chr1_1:13562005-13562024 None:intergenic 45.0%
CCTCAAGGAAACTATGCAGT+TGG + chr1_1:13562002-13562021 Msa0009290:CDS 45.0%
GCTTTCCTTTCTCCGACTAT+CGG - chr1_1:13562048-13562067 None:intergenic 45.0%
AACCTTGTGACCAAGAGACT+CGG - chr1_1:13562504-13562523 None:intergenic 45.0%
TCTCTTGGTCACAAGGTTCT+TGG + chr1_1:13562506-13562525 Msa0009290:CDS 45.0%
TTGGTCACAAGGTTCTTGGT+TGG + chr1_1:13562510-13562529 Msa0009290:CDS 45.0%
AGAAACAGGTACGTTCAAGC+TGG + chr1_1:13562642-13562661 Msa0009290:intron 45.0%
GAAACAGGTACGTTCAAGCT+GGG + chr1_1:13562643-13562662 Msa0009290:intron 45.0%
AAACAGGTACGTTCAAGCTG+GGG + chr1_1:13562644-13562663 Msa0009290:intron 45.0%
AATCTGTAATTCCGTCGCTG+TGG - chr1_1:13562917-13562936 None:intergenic 45.0%
! TGGGAGTATAGAGTTAGTGG+AGG - chr1_1:13563203-13563222 None:intergenic 45.0%
! GGTTGTTCCTATGCTGTTTG+TGG - chr1_1:13563223-13563242 None:intergenic 45.0%
GGAACAACCAGTAACTGAAG+AGG + chr1_1:13563234-13563253 Msa0009290:exon 45.0%
! TAACTGAAGAGGTGCAAGGT+TGG + chr1_1:13563245-13563264 Msa0009290:three_prime_UTR 45.0%
! AACTGAAGAGGTGCAAGGTT+GGG + chr1_1:13563246-13563265 Msa0009290:three_prime_UTR 45.0%
!! GAATGACTTCTGAGGCATTG+AGG + chr1_1:13563269-13563288 Msa0009290:three_prime_UTR 45.0%
! GGATGCTGGATTAGATGCAA+TGG + chr1_1:13563342-13563361 Msa0009290:three_prime_UTR 45.0%
! TTCTGCCGATGCTTTCTAGT+TGG + chr1_1:13563414-13563433 Msa0009290:three_prime_UTR 45.0%
! CCAGACCAACTAGAAAGCAT+CGG - chr1_1:13563422-13563441 None:intergenic 45.0%
! TGCCCAACCTTTTCGTGTAT+TGG + chr1_1:13563679-13563698 Msa0009290:three_prime_UTR 45.0%
! GCCCAACCTTTTCGTGTATT+GGG + chr1_1:13563680-13563699 Msa0009290:three_prime_UTR 45.0%
GCCCAATACACGAAAAGGTT+GGG - chr1_1:13563684-13563703 None:intergenic 45.0%
TTGTGGCCCAATACACGAAA+AGG - chr1_1:13563689-13563708 None:intergenic 45.0%
TTTCGTGTATTGGGCCACAA+CGG + chr1_1:13563689-13563708 Msa0009290:three_prime_UTR 45.0%
CTGTGTTATCATCCCACTGT+TGG + chr1_1:13563830-13563849 Msa0009290:intron 45.0%
! TCATCCCACTGTTGGTGAAA+TGG + chr1_1:13563838-13563857 Msa0009290:intron 45.0%
! TTCTACTTTAGAGGGGGGAA+AGG - chr1_1:13563914-13563933 None:intergenic 45.0%
! ACGGCATTAAGTGTTGTGCA+TGG + chr1_1:13563990-13564009 Msa0009290:intron 45.0%
! CGGCATTAAGTGTTGTGCAT+GGG + chr1_1:13563991-13564010 Msa0009290:intron 45.0%
! TTGTAGGATAAAAGCACGCG+AGG + chr1_1:13564071-13564090 Msa0009290:intron 45.0%
! TGTAGGATAAAAGCACGCGA+GGG + chr1_1:13564072-13564091 Msa0009290:intron 45.0%
CCATCAAAACATCCTGCAGA+AGG - chr1_1:13564257-13564276 None:intergenic 45.0%
!! CCTTCTGCAGGATGTTTTGA+TGG + chr1_1:13564254-13564273 Msa0009290:intron 45.0%
! TGATGATGATTCCTGAAGCG+TGG + chr1_1:13564327-13564346 Msa0009290:three_prime_UTR 45.0%
! GGAAAATAGAAGTGTGGTCC+CGG - chr1_1:13564456-13564475 None:intergenic 45.0%
GTTACCGATGGTCACTATCT+TGG + chr1_1:13564531-13564550 Msa0009290:intron 45.0%
AGCTCCAAGATAGTGACCAT+CGG - chr1_1:13564538-13564557 None:intergenic 45.0%
CATTATAACCCGTCCACTGT+GGG - chr1_1:13564604-13564623 None:intergenic 45.0%
TTCCTCCAGAAGATGTGTGT+AGG + chr1_1:13564649-13564668 Msa0009290:three_prime_UTR 45.0%
TTCCTACACACATCTTCTGG+AGG - chr1_1:13564654-13564673 None:intergenic 45.0%
CCTTTCCTACACACATCTTC+TGG - chr1_1:13564657-13564676 None:intergenic 45.0%
CCAGAAGATGTGTGTAGGAA+AGG + chr1_1:13564654-13564673 Msa0009290:three_prime_UTR 45.0%
AAATCCAGGCATGATGCTTC+TGG + chr1_1:13564683-13564702 Msa0009290:three_prime_UTR 45.0%
TACTCATTGGCAAGACCCTA+CGG + chr1_1:13564756-13564775 Msa0009290:three_prime_UTR 45.0%
!! CTTTTCAAGCCAATCTCCGT+AGG - chr1_1:13564775-13564794 None:intergenic 45.0%
ATTGTGCCACCAACCATATC+AGG + chr1_1:13564843-13564862 Msa0009290:three_prime_UTR 45.0%
! CTGGCTCCATTGAAAGCTTT+TGG + chr1_1:13565008-13565027 Msa0009290:three_prime_UTR 45.0%
GGAAGAATTACACAGTACGG+AGG - chr1_1:13565042-13565061 None:intergenic 45.0%
GCTATTACTTCCCATGGCAA+AGG + chr1_1:13565147-13565166 Msa0009290:three_prime_UTR 45.0%
TTACTTCCCATGGCAAAGGA+TGG + chr1_1:13565151-13565170 Msa0009290:three_prime_UTR 45.0%
! TGTCGAAGCACTTGGTTCAA+TGG + chr1_1:13565174-13565193 Msa0009290:three_prime_UTR 45.0%
! GTCGAAGCACTTGGTTCAAT+GGG + chr1_1:13565175-13565194 Msa0009290:three_prime_UTR 45.0%
GTTTCTGTCAGATCACCTTC+GGG - chr1_1:13565343-13565362 None:intergenic 45.0%
GGTTTCTGTCAGATCACCTT+CGG - chr1_1:13565344-13565363 None:intergenic 45.0%
! AGGTCCCCTTTTATCCACTA+AGG + chr1_1:13565396-13565415 Msa0009290:three_prime_UTR 45.0%
GATGGCTTCCATTTCCTTAG+TGG - chr1_1:13565413-13565432 None:intergenic 45.0%
! TGTTGCTGTGAGCTCTCTTT+TGG + chr1_1:13565700-13565719 Msa0009290:three_prime_UTR 45.0%
CTCAGCAGATTCGACCATTA+GGG - chr1_1:13565780-13565799 None:intergenic 45.0%
CACCATTTCTGCACACTTGT+TGG + chr1_1:13565812-13565831 Msa0009290:three_prime_UTR 45.0%
ATGCCCATATTTGGCTGTAG+AGG + chr1_1:13565853-13565872 Msa0009290:three_prime_UTR 45.0%
AAGATCCCACCAAAAGCAAG+TGG + chr1_1:13565902-13565921 Msa0009290:three_prime_UTR 45.0%
GATGAAGGTTCTTGCCAAGA+TGG + chr1_1:13565985-13566004 Msa0009290:three_prime_UTR 45.0%
!! GTGATCGAAAAGTGCTTTGC+TGG + chr1_1:13566073-13566092 Msa0009290:three_prime_UTR 45.0%
TGCACTTCATCTGCATGAGT+TGG + chr1_1:13566144-13566163 Msa0009290:three_prime_UTR 45.0%
AACAAGGCTTGCAATTTGCG+AGG + chr1_1:13566358-13566377 Msa0009290:three_prime_UTR 45.0%
ACAAGGCTTGCAATTTGCGA+GGG + chr1_1:13566359-13566378 Msa0009290:three_prime_UTR 45.0%
ATTGGAGGGAAATCCAACAC+AGG + chr1_1:13566532-13566551 Msa0009290:three_prime_UTR 45.0%
ATATCTGTTGTAGGTGAGGG+AGG + chr1_1:13566766-13566785 Msa0009290:intron 45.0%
ATGGCTCAAGGAATCCCAAA+AGG + chr1_1:13566821-13566840 Msa0009290:three_prime_UTR 45.0%
! CTGCTTAATGGCACTCCTTT+TGG - chr1_1:13566839-13566858 None:intergenic 45.0%
!! CAAAAGGAGTGCCATTAAGC+AGG + chr1_1:13566837-13566856 Msa0009290:three_prime_UTR 45.0%
CCATTAAGCAGGTTGCTAGT+GGG + chr1_1:13566848-13566867 Msa0009290:three_prime_UTR 45.0%
ACTTCAGATAAAGATGGCCC+AGG + chr1_1:13566912-13566931 Msa0009290:three_prime_UTR 45.0%
CTGCATTCCTGTTGGACATA+CGG + chr1_1:13567016-13567035 Msa0009290:intron 45.0%
AACAGAACCGTATGTCCAAC+AGG - chr1_1:13567026-13567045 None:intergenic 45.0%
!! CTGTGACATAAAGGCACCTA+TGG + chr1_1:13567077-13567096 Msa0009290:intron 45.0%
! TAAATATCGTGATGGGGAGG+TGG - chr1_1:13567320-13567339 None:intergenic 45.0%
! TCGTGTTTCTGTTCGACTGT+TGG + chr1_1:13567403-13567422 Msa0009290:intron 45.0%
TCACACTAATTCGAGCAGCT+GGG - chr1_1:13567488-13567507 None:intergenic 45.0%
TTCACACTAATTCGAGCAGC+TGG - chr1_1:13567489-13567508 None:intergenic 45.0%
! CTAGTATCTGAAGCAGGAGT+TGG + chr1_1:13567510-13567529 Msa0009290:three_prime_UTR 45.0%
! AGTATCTGAAGCAGGAGTTG+GGG + chr1_1:13567512-13567531 Msa0009290:three_prime_UTR 45.0%
GTCTTGATCTCAGGTCATGA+TGG + chr1_1:13567573-13567592 Msa0009290:three_prime_UTR 45.0%
TTGATCTCAGGTCATGATGG+AGG + chr1_1:13567576-13567595 Msa0009290:three_prime_UTR 45.0%
!! TGGACTGGTATAAAGAGTGC+TGG + chr1_1:13567615-13567634 Msa0009290:three_prime_UTR 45.0%
TTGGTTGCTAATGACCTACG+TGG + chr1_1:13567678-13567697 Msa0009290:three_prime_UTR 45.0%
CGTACAACTCTGCAAACTGA+CGG + chr1_1:13567702-13567721 Msa0009290:three_prime_UTR 45.0%
GTACAACTCTGCAAACTGAC+GGG + chr1_1:13567703-13567722 Msa0009290:three_prime_UTR 45.0%
! ACTGACGGGCAACTAAAAAC+CGG + chr1_1:13567717-13567736 Msa0009290:three_prime_UTR 45.0%
CATACTCTTCTGCACCAAGA+AGG - chr1_1:13567764-13567783 None:intergenic 45.0%
! CTTCTTGGTGCAGAAGAGTA+TGG + chr1_1:13567762-13567781 Msa0009290:three_prime_UTR 45.0%
ATGCAGCCAAGAGTAATGAG+GGG - chr1_1:13567801-13567820 None:intergenic 45.0%
GATGCAGCCAAGAGTAATGA+GGG - chr1_1:13567802-13567821 None:intergenic 45.0%
TGATGCAGCCAAGAGTAATG+AGG - chr1_1:13567803-13567822 None:intergenic 45.0%
AGTAGCAATTCCAACAGGAC+AGG - chr1_1:13567850-13567869 None:intergenic 45.0%
! GCAAGATCATGGTTTGGACA+TGG + chr1_1:13568133-13568152 Msa0009290:three_prime_UTR 45.0%
! TCATGGTTTGGACATGGCTT+TGG + chr1_1:13568139-13568158 Msa0009290:three_prime_UTR 45.0%
! AAGTCTGTCCAATGCTGCTT+TGG + chr1_1:13568175-13568194 Msa0009290:three_prime_UTR 45.0%
!! GTCCAATGCTGCTTTGGAAA+AGG + chr1_1:13568181-13568200 Msa0009290:three_prime_UTR 45.0%
! ACCCTTTTCCAAAGCAGCAT+TGG - chr1_1:13568186-13568205 None:intergenic 45.0%
GCACGGTTAGTATTGCAGAT+CGG - chr1_1:13568230-13568249 None:intergenic 45.0%
TGCAATACTAACCGTGCTGT+GGG + chr1_1:13568233-13568252 Msa0009290:three_prime_UTR 45.0%
TAAGCATAGTTCCCACAGCA+CGG - chr1_1:13568247-13568266 None:intergenic 45.0%
TTAGCCACGAGGTTACTAAG+AGG + chr1_1:13568264-13568283 Msa0009290:three_prime_UTR 45.0%
TGTACCTCTTAGTAACCTCG+TGG - chr1_1:13568271-13568290 None:intergenic 45.0%
TGGATATGGATGGTATCAGC+TGG - chr1_1:13568308-13568327 None:intergenic 45.0%
! TTTGGTGCATTCCTTTGTCC+TGG + chr1_1:13568353-13568372 Msa0009290:three_prime_UTR 45.0%
CCAATGTGATTCCAGGACAA+AGG - chr1_1:13568367-13568386 None:intergenic 45.0%
CCTTTGTCCTGGAATCACAT+TGG + chr1_1:13568364-13568383 Msa0009290:three_prime_UTR 45.0%
ATTGGCAATGTGGCACTGTA+TGG + chr1_1:13568494-13568513 Msa0009290:three_prime_UTR 45.0%
TTGGCAATGTGGCACTGTAT+GGG + chr1_1:13568495-13568514 Msa0009290:three_prime_UTR 45.0%
CGTGGTGAGGCATATTTCAA+TGG + chr1_1:13568524-13568543 Msa0009290:three_prime_UTR 45.0%
!! GTTGAAGGTGTTGGTGATCA+TGG + chr1_1:13568596-13568615 Msa0009290:three_prime_UTR 45.0%
CATGGATGTGAGTACATGAC+TGG + chr1_1:13568614-13568633 Msa0009290:three_prime_UTR 45.0%
GATGTGAGTACATGACTGGT+GGG + chr1_1:13568618-13568637 Msa0009290:three_prime_UTR 45.0%
GCTTATGTTCTTGACGTGGA+TGG + chr1_1:13568701-13568720 Msa0009290:three_prime_UTR 45.0%
TATCCAGATCTACAAGCTCC+AGG - chr1_1:13568748-13568767 None:intergenic 45.0%
GGAGCTTGTAGATCTGGATA+AGG + chr1_1:13568748-13568767 Msa0009290:three_prime_UTR 45.0%
GGATAAGGTTGAAGAGGAAG+AGG + chr1_1:13568763-13568782 Msa0009290:three_prime_UTR 45.0%
! CACAAACAGTTTGCTTGCCA+AGG + chr1_1:13568829-13568848 Msa0009290:three_prime_UTR 45.0%
! ATTTGTCAAGGTGTTCCCTC+GGG + chr1_1:13568886-13568905 Msa0009290:three_prime_UTR 45.0%
GAACACGTTTATACTCCCGA+GGG - chr1_1:13568904-13568923 None:intergenic 45.0%
AGAACACGTTTATACTCCCG+AGG - chr1_1:13568905-13568924 None:intergenic 45.0%
AGCATCTTTCTCCACTGCTT+GGG - chr1_1:13569008-13569027 None:intergenic 45.0%
AAGCATCTTTCTCCACTGCT+TGG - chr1_1:13569009-13569028 None:intergenic 45.0%
ACCTGGTGAAAACTATGCTG+GGG + chr1_1:13569303-13569322 Msa0009290:intron 45.0%
!! TTTTGTTGCTTACGAGCGTG+AGG + chr1_1:13569485-13569504 Msa0009290:three_prime_UTR 45.0%
! TTTGTTGCTTACGAGCGTGA+GGG + chr1_1:13569486-13569505 Msa0009290:three_prime_UTR 45.0%
TCACCTCACTCCAATCATTC+AGG - chr1_1:13569539-13569558 None:intergenic 45.0%
TGATTGGAGTGAGGTGATGA+TGG + chr1_1:13569542-13569561 Msa0009290:three_prime_UTR 45.0%
ATGCCCACCTGATGACAAAA+TGG - chr1_1:13569627-13569646 None:intergenic 45.0%
! TCCGGTATTTTGTTCCCAAG+AGG - chr1_1:13569755-13569774 None:intergenic 45.0%
AAGAACCTTCACAAGGTGCA+GGG - chr1_1:13569871-13569890 None:intergenic 45.0%
AGGACACAAGAACCTTCACA+AGG - chr1_1:13569878-13569897 None:intergenic 45.0%
TGTGAAGGTTCTTGTGTCCT+TGG + chr1_1:13569878-13569897 Msa0009290:three_prime_UTR 45.0%
!! CATTGACAAGGCTTTTGAGG+AGG + chr1_1:13569946-13569965 Msa0009290:three_prime_UTR 45.0%
TCATACCCAGTTCTCTTGAC+AGG - chr1_1:13569992-13570011 None:intergenic 45.0%
AGAGTAGCCATTGTTGGAAG+TGG + chr1_1:13570193-13570212 Msa0009290:three_prime_UTR 45.0%
TGATGGTCCACTTCCAACAA+TGG - chr1_1:13570203-13570222 None:intergenic 45.0%
ATTGTTGGAAGTGGACCATC+AGG + chr1_1:13570202-13570221 Msa0009290:three_prime_UTR 45.0%
GAAAGAGCTGATCGTATTGG+TGG + chr1_1:13570277-13570296 Msa0009290:three_prime_UTR 45.0%
GTCAATCTAATGGCTGAGGA+AGG + chr1_1:13570361-13570380 Msa0009290:three_prime_UTR 45.0%
GGAAAACGATGCCATTGTCT+TGG + chr1_1:13570450-13570469 Msa0009290:three_prime_UTR 45.0%
GACACAATGACAGCAGTCTA+TGG + chr1_1:13570499-13570518 Msa0009290:intron 45.0%
TGGTAACTACATCTCTGCCA+AGG + chr1_1:13570700-13570719 Msa0009290:three_prime_UTR 45.0%
GGTAACTACATCTCTGCCAA+GGG + chr1_1:13570701-13570720 Msa0009290:three_prime_UTR 45.0%
AAGAAGGTTGTGGTCATTGG+CGG + chr1_1:13570725-13570744 Msa0009290:three_prime_UTR 45.0%
AGCAGTACAACCATGACGAA+TGG - chr1_1:13570783-13570802 None:intergenic 45.0%
CAAATCTAACCTGAGGCCAT+GGG - chr1_1:13570859-13570878 None:intergenic 45.0%
TCAAATCTAACCTGAGGCCA+TGG - chr1_1:13570860-13570879 None:intergenic 45.0%
CCACTGCATTACAGAAAGAG+TGG - chr1_1:13570933-13570952 None:intergenic 45.0%
CCACTCTTTCTGTAATGCAG+TGG + chr1_1:13570930-13570949 Msa0009290:intron 45.0%
GGTACTCACTAAGAGGTTTG+TGG + chr1_1:13571027-13571046 Msa0009290:three_prime_UTR 45.0%
!!! CGACCTAGTTTTACTAGCCA+TGG + chr1_1:13571165-13571184 Msa0009290:three_prime_UTR 45.0%
TTACTAGCCATGGGATTCCT+TGG + chr1_1:13571175-13571194 Msa0009290:three_prime_UTR 45.0%
! GTGGTATGGGCTATTTCAGA+GGG + chr1_1:13571609-13571628 Msa0009290:three_prime_UTR 45.0%
! TATGGGCTATTTCAGAGGGA+AGG + chr1_1:13571613-13571632 Msa0009290:three_prime_UTR 45.0%
TACCTCACCAAAGAAGACCA+CGG + chr1_1:13571660-13571679 Msa0009290:three_prime_UTR 45.0%
ACCAAAGAAGACCACGGTAT+TGG + chr1_1:13571666-13571685 Msa0009290:three_prime_UTR 45.0%
ACCAATACCGTGGTCTTCTT+TGG - chr1_1:13571670-13571689 None:intergenic 45.0%
! AAAGAAGACCACGGTATTGG+TGG + chr1_1:13571669-13571688 Msa0009290:three_prime_UTR 45.0%
!! AAGAAGACCACGGTATTGGT+GGG + chr1_1:13571670-13571689 Msa0009290:three_prime_UTR 45.0%
!! GTTTGCTGTGCTTCTTGTTG+AGG - chr1_1:13571728-13571747 None:intergenic 45.0%
TTGGCAGTTAGTAAGCCGAA+TGG + chr1_1:13571864-13571883 Msa0009290:three_prime_UTR 45.0%
TGGCAGTTAGTAAGCCGAAT+GGG + chr1_1:13571865-13571884 Msa0009290:three_prime_UTR 45.0%
! CCGTTCTTATTTCGCCCATT+CGG - chr1_1:13571882-13571901 None:intergenic 45.0%
CCGAATGGGCGAAATAAGAA+CGG + chr1_1:13571879-13571898 Msa0009290:three_prime_UTR 45.0%
AGGAAAGCAAGAGGTTGTCT+TGG + chr1_1:13571930-13571949 Msa0009290:three_prime_UTR 45.0%
!! GAGGTTGTCTTGGTTTTTGG+TGG + chr1_1:13571940-13571959 Msa0009290:three_prime_UTR 45.0%
!! TGGGAAGGCTAGCTTAGTTA+TGG + chr1_1:13572015-13572034 Msa0009290:three_prime_UTR 45.0%
!!! AGAATTTATTTTATATAAAT+AGG - chr1_1:13561677-13561696 None:intergenic 5.0%
!! TAATAATATAAAATTAGATT+AGG - chr1_1:13564509-13564528 None:intergenic 5.0%
!!! TCTAAAATATTTTTTAAAAT+AGG - chr1_1:13569280-13569299 None:intergenic 5.0%
!! AAAAAAATTATTATCAATTA+TGG - chr1_1:13571445-13571464 None:intergenic 5.0%
GTGGAGAGGAAGAGATGGTT+AGG + chr1_1:13560093-13560112 Msa0009290:CDS 50.0%
ACGAAATTGCGAAGTGGTGG+TGG + chr1_1:13560117-13560136 Msa0009290:CDS 50.0%
!! ATTGCGAAGTGGTGGTGGTT+TGG + chr1_1:13560122-13560141 Msa0009290:CDS 50.0%
TTAACCGCCACTCTGAGCTT+CGG - chr1_1:13560189-13560208 None:intergenic 50.0%
!! GGCGGTTAAGTCGTCGTTTT+CGG + chr1_1:13560200-13560219 Msa0009290:CDS 50.0%
GCCGGATCATAAAGTCCCAT+CGG - chr1_1:13560240-13560259 None:intergenic 50.0%
TACTGCTACTACCTGGTTGG+GGG - chr1_1:13561085-13561104 None:intergenic 50.0%
ATAAGATACTCCCTCCGTCC+CGG - chr1_1:13561588-13561607 None:intergenic 50.0%
CTTAAGGTTGCCGAGTCTCT+TGG + chr1_1:13562491-13562510 Msa0009290:intron 50.0%
TCTGTGCCCACAGATAACAC+AGG + chr1_1:13562536-13562555 Msa0009290:CDS 50.0%
CTGTGCCCACAGATAACACA+GGG + chr1_1:13562537-13562556 Msa0009290:CDS 50.0%
CCCAACCCTGTGTTATCTGT+GGG - chr1_1:13562545-13562564 None:intergenic 50.0%
CCCACAGATAACACAGGGTT+GGG + chr1_1:13562542-13562561 Msa0009290:CDS 50.0%
!! TATCACTGGTTCGGTCAGCT+GGG - chr1_1:13562576-13562595 None:intergenic 50.0%
GCATTAAACCTCCACAGCGA+CGG + chr1_1:13562903-13562922 Msa0009290:CDS 50.0%
TCAGCTAACACCAGCTCAGT+TGG + chr1_1:13563090-13563109 Msa0009290:CDS 50.0%
CAGCTAACACCAGCTCAGTT+GGG + chr1_1:13563091-13563110 Msa0009290:CDS 50.0%
CCTTGCACCTCTTCAGTTAC+TGG - chr1_1:13563244-13563263 None:intergenic 50.0%
! CCAGTAACTGAAGAGGTGCA+AGG + chr1_1:13563241-13563260 Msa0009290:three_prime_UTR 50.0%
! ACTGAAGAGGTGCAAGGTTG+GGG + chr1_1:13563247-13563266 Msa0009290:three_prime_UTR 50.0%
AGGTTGGGGAATGACTTCTG+AGG + chr1_1:13563261-13563280 Msa0009290:three_prime_UTR 50.0%
!! CCGATGCTTTCTAGTTGGTC+TGG + chr1_1:13563419-13563438 Msa0009290:three_prime_UTR 50.0%
GGCCCAATACACGAAAAGGT+TGG - chr1_1:13563685-13563704 None:intergenic 50.0%
TTCGTGTATTGGGCCACAAC+GGG + chr1_1:13563690-13563709 Msa0009290:three_prime_UTR 50.0%
!! GTGTGTTGATTTCCCCGTTG+TGG - chr1_1:13563706-13563725 None:intergenic 50.0%
ACGGGGAAATCAACACACTC+AGG + chr1_1:13563708-13563727 Msa0009290:three_prime_UTR 50.0%
CGGGGAAATCAACACACTCA+GGG + chr1_1:13563709-13563728 Msa0009290:three_prime_UTR 50.0%
GGGGAAATCAACACACTCAG+GGG + chr1_1:13563710-13563729 Msa0009290:three_prime_UTR 50.0%
! CGCATGGTTTTTCCTTCTGC+AGG + chr1_1:13564242-13564261 Msa0009290:intron 50.0%
GTGGCAGAACGACAAGAACA+TGG + chr1_1:13564346-13564365 Msa0009290:three_prime_UTR 50.0%
! ATTCAGCTCTGATGGAGCCA+TGG + chr1_1:13564399-13564418 Msa0009290:three_prime_UTR 50.0%
! TTCAGCTCTGATGGAGCCAT+GGG + chr1_1:13564400-13564419 Msa0009290:three_prime_UTR 50.0%
!! GATAGGAATGGACTACGACC+TGG + chr1_1:13564564-13564583 Msa0009290:three_prime_UTR 50.0%
CACTGTGGGTGACATAGAAG+CGG - chr1_1:13564590-13564609 None:intergenic 50.0%
TCTATGTCACCCACAGTGGA+CGG + chr1_1:13564592-13564611 Msa0009290:three_prime_UTR 50.0%
CCATTATAACCCGTCCACTG+TGG - chr1_1:13564605-13564624 None:intergenic 50.0%
!! CCACAGTGGACGGGTTATAA+TGG + chr1_1:13564602-13564621 Msa0009290:three_prime_UTR 50.0%
!! TACTGGAGGCACTCCTGATA+TGG - chr1_1:13564859-13564878 None:intergenic 50.0%
TCGACACCATCCTTTGCCAT+GGG - chr1_1:13565160-13565179 None:intergenic 50.0%
TTCGACACCATCCTTTGCCA+TGG - chr1_1:13565161-13565180 None:intergenic 50.0%
! AAGGATGGTGTCGAAGCACT+TGG + chr1_1:13565166-13565185 Msa0009290:three_prime_UTR 50.0%
TCTCGAATAGGATCGATCGG+AGG - chr1_1:13565286-13565305 None:intergenic 50.0%
TGATCTGACAGAAACCACCG+AGG + chr1_1:13565348-13565367 Msa0009290:three_prime_UTR 50.0%
TGCCACCGCCTTTCACTAAA+AGG + chr1_1:13565376-13565395 Msa0009290:three_prime_UTR 50.0%
! GACCTTTTAGTGAAAGGCGG+TGG - chr1_1:13565381-13565400 None:intergenic 50.0%
! GGGGACCTTTTAGTGAAAGG+CGG - chr1_1:13565384-13565403 None:intergenic 50.0%
GGAACGTGGTAAGAAAGGGT+TGG + chr1_1:13565489-13565508 Msa0009290:three_prime_UTR 50.0%
ACGTGGTAAGAAAGGGTTGG+AGG + chr1_1:13565492-13565511 Msa0009290:three_prime_UTR 50.0%
!! GTGAGCTCTCTTTTGGCTGT+TGG + chr1_1:13565707-13565726 Msa0009290:three_prime_UTR 50.0%
GCTCAGCAGATTCGACCATT+AGG - chr1_1:13565781-13565800 None:intergenic 50.0%
! ATTTGGCGACTGCAGGTTGA+CGG + chr1_1:13565878-13565897 Msa0009290:three_prime_UTR 50.0%
! TGGAACTCCAAGTCGAGTTG+AGG + chr1_1:13566093-13566112 Msa0009290:three_prime_UTR 50.0%
!! GGAACTCCAAGTCGAGTTGA+GGG + chr1_1:13566094-13566113 Msa0009290:three_prime_UTR 50.0%
CCAGGAGAGAAAATCCGAGA+AGG - chr1_1:13566175-13566194 None:intergenic 50.0%
! CCTTCTCGGATTTTCTCTCC+TGG + chr1_1:13566172-13566191 Msa0009290:three_prime_UTR 50.0%
TGCACTGGGGCTATGAGTTA+TGG + chr1_1:13566460-13566479 Msa0009290:three_prime_UTR 50.0%
GCACTGGGGCTATGAGTTAT+GGG + chr1_1:13566461-13566480 Msa0009290:three_prime_UTR 50.0%
TGCCGTTGCTAATGCTGTGT+GGG - chr1_1:13566503-13566522 None:intergenic 50.0%
TTGCCGTTGCTAATGCTGTG+TGG - chr1_1:13566504-13566523 None:intergenic 50.0%
AGGTGAGCAACCATCTCGTA+TGG + chr1_1:13566786-13566805 Msa0009290:three_prime_UTR 50.0%
TTCCTTGAGCCATCAGCAAG+AGG - chr1_1:13566814-13566833 None:intergenic 50.0%
GCCATTAAGCAGGTTGCTAG+TGG + chr1_1:13566847-13566866 Msa0009290:three_prime_UTR 50.0%
CCCACTAGCAACCTGCTTAA+TGG - chr1_1:13566851-13566870 None:intergenic 50.0%
CAGGTTGCTAGTGGGAGATT+TGG + chr1_1:13566856-13566875 Msa0009290:three_prime_UTR 50.0%
CGTATGTCCAACAGGAATGC+AGG - chr1_1:13567018-13567037 None:intergenic 50.0%
!! AATGACGCAAGAGCACCCAT+AGG - chr1_1:13567096-13567115 None:intergenic 50.0%
AATCCTCAGGGAGCAAAACC+TGG + chr1_1:13567209-13567228 Msa0009290:intron 50.0%
CTTCCTGGCCACAAGGTTAT+AGG + chr1_1:13567245-13567264 Msa0009290:three_prime_UTR 50.0%
TCTCCTATAACCTTGTGGCC+AGG - chr1_1:13567251-13567270 None:intergenic 50.0%
AGGAATTCAACAGCCGGAGT+AGG + chr1_1:13567284-13567303 Msa0009290:three_prime_UTR 50.0%
GGAATTCAACAGCCGGAGTA+GGG + chr1_1:13567285-13567304 Msa0009290:three_prime_UTR 50.0%
ACTAATTCGAGCAGCTGGGT+TGG - chr1_1:13567484-13567503 None:intergenic 50.0%
GGAGTTGGGGTAATTGCTAG+TGG + chr1_1:13567525-13567544 Msa0009290:three_prime_UTR 50.0%
GCTGAGCATGTCTTGATCTC+AGG + chr1_1:13567564-13567583 Msa0009290:three_prime_UTR 50.0%
! TCAGGTCATGATGGAGGTAC+AGG + chr1_1:13567582-13567601 Msa0009290:three_prime_UTR 50.0%
!! TAAAGAGTGCTGGACTGCCT+TGG + chr1_1:13567625-13567644 Msa0009290:three_prime_UTR 50.0%
!! AAAGAGTGCTGGACTGCCTT+GGG + chr1_1:13567626-13567645 Msa0009290:three_prime_UTR 50.0%
ACTGCTCCCCTCATTACTCT+TGG + chr1_1:13567792-13567811 Msa0009290:three_prime_UTR 50.0%
CTCTTGGCTGCATCATGATG+CGG + chr1_1:13567808-13567827 Msa0009290:three_prime_UTR 50.0%
CAACAGGACAGGTGTTCTTG+TGG - chr1_1:13567839-13567858 None:intergenic 50.0%
CACAAGAACACCTGTCCTGT+TGG + chr1_1:13567837-13567856 Msa0009290:three_prime_UTR 50.0%
TTAGACCTGCAGCTGAACTG+CGG + chr1_1:13568081-13568100 Msa0009290:three_prime_UTR 50.0%
! ACACAGTATTGGGCAGCTTC+TGG - chr1_1:13568107-13568126 None:intergenic 50.0%
CTGCAATACTAACCGTGCTG+TGG + chr1_1:13568232-13568251 Msa0009290:three_prime_UTR 50.0%
GGCCTGCACTACCAGTAAAT+TGG - chr1_1:13568328-13568347 None:intergenic 50.0%
TGGCAATGTGGCACTGTATG+GGG + chr1_1:13568496-13568515 Msa0009290:three_prime_UTR 50.0%
! CAGGCTGTAGTTGAAGGTGT+TGG + chr1_1:13568587-13568606 Msa0009290:three_prime_UTR 50.0%
GGATGTGAGTACATGACTGG+TGG + chr1_1:13568617-13568636 Msa0009290:three_prime_UTR 50.0%
! GTGGGACCGTTGTTGTTCTT+GGG + chr1_1:13568636-13568655 Msa0009290:three_prime_UTR 50.0%
TTTGCTGCAGGTATGAGTGG+TGG + chr1_1:13568674-13568693 Msa0009290:three_prime_UTR 50.0%
CAACCTGGAGCTTGTAGATC+TGG + chr1_1:13568742-13568761 Msa0009290:three_prime_UTR 50.0%
! TGCAGCCTCTAAAGATGCAG+TGG + chr1_1:13568943-13568962 Msa0009290:three_prime_UTR 50.0%
CTGCTCCACTGCATCTTTAG+AGG - chr1_1:13568951-13568970 None:intergenic 50.0%
! CTCTAAAGATGCAGTGGAGC+AGG + chr1_1:13568949-13568968 Msa0009290:three_prime_UTR 50.0%
AGATGATGAAGCCCAAGCAG+TGG + chr1_1:13568994-13569013 Msa0009290:three_prime_UTR 50.0%
! ACCCCAGCATAGTTTTCACC+AGG - chr1_1:13569307-13569326 None:intergenic 50.0%
ACAGCATCAGTGACCTGACT+TGG - chr1_1:13569453-13569472 None:intergenic 50.0%
!! AGCGTGAGGGTGTTCAGTAT+AGG + chr1_1:13569499-13569518 Msa0009290:three_prime_UTR 50.0%
!! GCGTGAGGGTGTTCAGTATA+GGG + chr1_1:13569500-13569519 Msa0009290:three_prime_UTR 50.0%
TCGCCTGAATGATTGGAGTG+AGG + chr1_1:13569533-13569552 Msa0009290:three_prime_UTR 50.0%
!! GGTGATGATGGAGACAAAGC+CGG + chr1_1:13569554-13569573 Msa0009290:three_prime_UTR 50.0%
!! GTGATGATGGAGACAAAGCC+GGG + chr1_1:13569555-13569574 Msa0009290:three_prime_UTR 50.0%
AGTACCACAGTCCATGCAAC+GGG - chr1_1:13569604-13569623 None:intergenic 50.0%
GAGTACCACAGTCCATGCAA+CGG - chr1_1:13569605-13569624 None:intergenic 50.0%
ACTTTCCTGAGTTCACTGGG+CGG + chr1_1:13569840-13569859 Msa0009290:three_prime_UTR 50.0%
CAAGAACCTTCACAAGGTGC+AGG - chr1_1:13569872-13569891 None:intergenic 50.0%
GACCTCCTGTCAAGAGAACT+GGG + chr1_1:13569984-13570003 Msa0009290:three_prime_UTR 50.0%
TACCCAGTTCTCTTGACAGG+AGG - chr1_1:13569989-13570008 None:intergenic 50.0%
GCGAGTCAATCTAATGGCTG+AGG + chr1_1:13570357-13570376 Msa0009290:three_prime_UTR 50.0%
CTCTCTTGAACGACTTCGAG+AGG + chr1_1:13570429-13570448 Msa0009290:three_prime_UTR 50.0%
GATGCCATTGTCTTGGCTGT+TGG + chr1_1:13570457-13570476 Msa0009290:three_prime_UTR 50.0%
AGCTCCAACAGCCAAGACAA+TGG - chr1_1:13570464-13570483 None:intergenic 50.0%
CTGTTGGAGCTACAAAGCCA+AGG + chr1_1:13570473-13570492 Msa0009290:three_prime_UTR 50.0%
GCTGTCATTGTGTCTCACCT+TGG - chr1_1:13570493-13570512 None:intergenic 50.0%
GGCAAGAAGGTTGTGGTCAT+TGG + chr1_1:13570722-13570741 Msa0009290:three_prime_UTR 50.0%
AGAAGGTTGTGGTCATTGGC+GGG + chr1_1:13570726-13570745 Msa0009290:three_prime_UTR 50.0%
GACACTGGCACAGATTGCAT+TGG + chr1_1:13570752-13570771 Msa0009290:three_prime_UTR 50.0%
TTGAAGTGGTACGTGTTCGC+TGG + chr1_1:13571077-13571096 Msa0009290:three_prime_UTR 50.0%
TGAAGTGGTACGTGTTCGCT+GGG + chr1_1:13571078-13571097 Msa0009290:three_prime_UTR 50.0%
CGCTGGGAGAAAGATGAAAC+TGG + chr1_1:13571094-13571113 Msa0009290:three_prime_UTR 50.0%
GGGCAGTGAGGAGATTATTG+AGG + chr1_1:13571141-13571160 Msa0009290:three_prime_UTR 50.0%
CGTCAACACTGGTAGAGAAG+CGG - chr1_1:13571548-13571567 None:intergenic 50.0%
! CGCTTCTCTACCAGTGTTGA+CGG + chr1_1:13571546-13571565 Msa0009290:three_prime_UTR 50.0%
!! GCTTCTCTACCAGTGTTGAC+GGG + chr1_1:13571547-13571566 Msa0009290:three_prime_UTR 50.0%
!! CTTCTCTACCAGTGTTGACG+GGG + chr1_1:13571548-13571567 Msa0009290:three_prime_UTR 50.0%
TGCAAATACCCCGTCAACAC+TGG - chr1_1:13571559-13571578 None:intergenic 50.0%
! GGTGGTATGGGCTATTTCAG+AGG + chr1_1:13571608-13571627 Msa0009290:three_prime_UTR 50.0%
GAGGTAGCTGTCAACTTGTG+CGG - chr1_1:13571646-13571665 None:intergenic 50.0%
TACCGTGGTCTTCTTTGGTG+AGG - chr1_1:13571665-13571684 None:intergenic 50.0%
!! GCACTTGCTTTAGGAACTCG+AGG - chr1_1:13571793-13571812 None:intergenic 50.0%
ACGGACGCAAACGAGCGTTA+GGG - chr1_1:13560041-13560060 None:intergenic 55.0%
AACGGACGCAAACGAGCGTT+AGG - chr1_1:13560042-13560061 None:intergenic 55.0%
TCGTTTGCGTCCGTTAGCGA+GGG + chr1_1:13560047-13560066 Msa0009290:CDS 55.0%
CATCGCGTAACCCTCGCTAA+CGG - chr1_1:13560060-13560079 None:intergenic 55.0%
TCTCTTCCTCTCCACACACG+TGG - chr1_1:13560088-13560107 None:intergenic 55.0%
CGTGTGTGGAGAGGAAGAGA+TGG + chr1_1:13560088-13560107 Msa0009290:CDS 55.0%
GGGACGAAATTGCGAAGTGG+TGG + chr1_1:13560114-13560133 Msa0009290:CDS 55.0%
!! GAAGTGGTGGTGGTTTGGAG+AGG + chr1_1:13560127-13560146 Msa0009290:CDS 55.0%
GCTGTGCCGGATAAACCGAT+GGG + chr1_1:13560222-13560241 Msa0009290:CDS 55.0%
! GCAAATACCGGTGATGGTGC+TGG + chr1_1:13560679-13560698 Msa0009290:CDS 55.0%
GCCTCATGGCTTCTACCAAG+AGG + chr1_1:13560717-13560736 Msa0009290:CDS 55.0%
GCCTCTTGGTAGAAGCCATG+AGG - chr1_1:13560721-13560740 None:intergenic 55.0%
! GTGTATTTTGCCCCCCAACC+AGG + chr1_1:13561071-13561090 Msa0009290:intron 55.0%
ACTGCTACTACCTGGTTGGG+GGG - chr1_1:13561084-13561103 None:intergenic 55.0%
AGTCAGTTATTCCGGGACGG+AGG + chr1_1:13561574-13561593 Msa0009290:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr1_1:13561575-13561594 Msa0009290:intron 55.0%
TGCCGAGTCTCTTGGTCACA+AGG + chr1_1:13562499-13562518 Msa0009290:CDS 55.0%
GCCCACAGATAACACAGGGT+TGG + chr1_1:13562541-13562560 Msa0009290:CDS 55.0%
GCCCAACCCTGTGTTATCTG+TGG - chr1_1:13562546-13562565 None:intergenic 55.0%
!! CTATCACTGGTTCGGTCAGC+TGG - chr1_1:13562577-13562596 None:intergenic 55.0%
CTGTAATTCCGTCGCTGTGG+AGG - chr1_1:13562914-13562933 None:intergenic 55.0%
GTTTACGAGCTACATGGCCC+TGG + chr1_1:13563147-13563166 Msa0009290:CDS 55.0%
TCGTGTATTGGGCCACAACG+GGG + chr1_1:13563691-13563710 Msa0009290:three_prime_UTR 55.0%
CACTCAGGGGCAATGTGAAC+TGG + chr1_1:13563723-13563742 Msa0009290:three_prime_UTR 55.0%
CGAGGGCCTACTGAAATGCA+AGG + chr1_1:13564089-13564108 Msa0009290:three_prime_UTR 55.0%
TTGTCGTTCTGCCACGCTTC+AGG - chr1_1:13564341-13564360 None:intergenic 55.0%
CTCTGATGGAGCCATGGGAT+GGG + chr1_1:13564405-13564424 Msa0009290:three_prime_UTR 55.0%
ATAAGAGCTGGCCCATCCCA+TGG - chr1_1:13564419-13564438 None:intergenic 55.0%
CGCTTCTATGTCACCCACAG+TGG + chr1_1:13564588-13564607 Msa0009290:three_prime_UTR 55.0%
CTATGTCACCCACAGTGGAC+GGG + chr1_1:13564593-13564612 Msa0009290:three_prime_UTR 55.0%
TCCAGGCATGATGCTTCTGG+TGG + chr1_1:13564686-13564705 Msa0009290:three_prime_UTR 55.0%
!! TCCACCAGAAGCATCATGCC+TGG - chr1_1:13564690-13564709 None:intergenic 55.0%
TGGCAAGACCCTACGGAGAT+TGG + chr1_1:13564763-13564782 Msa0009290:three_prime_UTR 55.0%
GGCACTCCTGATATGGTTGG+TGG - chr1_1:13564852-13564871 None:intergenic 55.0%
!! GGAGGCACTCCTGATATGGT+TGG - chr1_1:13564855-13564874 None:intergenic 55.0%
! CGATGTATGGTTGGTCCCGA+AGG + chr1_1:13565325-13565344 Msa0009290:three_prime_UTR 55.0%
!! GGTTGGAGGAAGCGTTAGAC+AGG + chr1_1:13565506-13565525 Msa0009290:three_prime_UTR 55.0%
GCGCACAAGAGTTGCCCTAA+TGG + chr1_1:13565763-13565782 Msa0009290:three_prime_UTR 55.0%
CAGAAATGGTGCACTTCGCG+TGG - chr1_1:13565803-13565822 None:intergenic 55.0%
AGAGGCAATTTGGCGACTGC+AGG + chr1_1:13565871-13565890 Msa0009290:three_prime_UTR 55.0%
GTTGCACCCTCAACTCGACT+TGG - chr1_1:13566103-13566122 None:intergenic 55.0%
GCTACTGCTTCTGCACTTCC+AGG - chr1_1:13566193-13566212 None:intergenic 55.0%
GCAGTAGCATTGCCAAACCC+TGG + chr1_1:13566205-13566224 Msa0009290:three_prime_UTR 55.0%
GGCCCACACAGCATTAGCAA+CGG + chr1_1:13566498-13566517 Msa0009290:three_prime_UTR 55.0%
GCAAGAGGCTCCATACGAGA+TGG - chr1_1:13566799-13566818 None:intergenic 55.0%
CGTATGGAGCCTCTTGCTGA+TGG + chr1_1:13566802-13566821 Msa0009290:three_prime_UTR 55.0%
AGCCTCTTGCTGATGGCTCA+AGG + chr1_1:13566809-13566828 Msa0009290:three_prime_UTR 55.0%
TGGTGCTCCTGCATTCCTGT+TGG + chr1_1:13567008-13567027 Msa0009290:intron 55.0%
! TCACCAGGTTTTGCTCCCTG+AGG - chr1_1:13567215-13567234 None:intergenic 55.0%
CAGGGAGCAAAACCTGGTGA+AGG + chr1_1:13567215-13567234 Msa0009290:intron 55.0%
GGAGCAAAACCTGGTGAAGG+AGG + chr1_1:13567218-13567237 Msa0009290:three_prime_UTR 55.0%
GGAAGTTCACCTCCTTCACC+AGG - chr1_1:13567230-13567249 None:intergenic 55.0%
GGTGAAGGAGGTGAACTTCC+TGG + chr1_1:13567230-13567249 Msa0009290:three_prime_UTR 55.0%
AGGTGAACTTCCTGGCCACA+AGG + chr1_1:13567238-13567257 Msa0009290:three_prime_UTR 55.0%
TGGACTGATGAGCCCTACTC+CGG - chr1_1:13567300-13567319 None:intergenic 55.0%
!! GAGGTACAGGAGCATCCAGA+TGG + chr1_1:13567595-13567614 Msa0009290:three_prime_UTR 55.0%
!! ACAGGAGCATCCAGATGGAC+TGG + chr1_1:13567600-13567619 Msa0009290:three_prime_UTR 55.0%
ACTGCCTTGGGAACTTGGTC+TGG + chr1_1:13567638-13567657 Msa0009290:three_prime_UTR 55.0%
TCAGCCAGACCAAGTTCCCA+AGG - chr1_1:13567645-13567664 None:intergenic 55.0%
GGCTGAGACCCACCAAACAT+TGG + chr1_1:13567659-13567678 Msa0009290:three_prime_UTR 55.0%
GCAGAGTTGTACGACCACGT+AGG - chr1_1:13567695-13567714 None:intergenic 55.0%
GGCTATGGCCACATCTCTTC+CGG - chr1_1:13567739-13567758 None:intergenic 55.0%
CTCTTCTGCACCAAGAAGGG+CGG - chr1_1:13567760-13567779 None:intergenic 55.0%
GGGAACTATGCTTAGCCACG+AGG + chr1_1:13568253-13568272 Msa0009290:three_prime_UTR 55.0%
GGTAGTGCAGGCCAAAGCTT+TGG + chr1_1:13568335-13568354 Msa0009290:three_prime_UTR 55.0%
!! TGTGCGTAATTCTGGGGCTC+AGG + chr1_1:13568568-13568587 Msa0009290:three_prime_UTR 55.0%
! GGTGGGACCGTTGTTGTTCT+TGG + chr1_1:13568635-13568654 Msa0009290:three_prime_UTR 55.0%
! ATTCCAGTCTCGGTGCAACC+TGG + chr1_1:13568727-13568746 Msa0009290:three_prime_UTR 55.0%
CATATCTGCAGGCTCCCAAG+AGG + chr1_1:13569427-13569446 Msa0009290:intron 55.0%
!! GTGACCTGACTTGGCCTCTT+GGG - chr1_1:13569444-13569463 None:intergenic 55.0%
!! AGTGACCTGACTTGGCCTCT+TGG - chr1_1:13569445-13569464 None:intergenic 55.0%
AACACAGTCTGCCCGTTGCA+TGG + chr1_1:13569590-13569609 Msa0009290:three_prime_UTR 55.0%
!! GGTGGCAAGAAGCACTAGAG+AGG + chr1_1:13569801-13569820 Msa0009290:three_prime_UTR 55.0%
CTTTCCTGAGTTCACTGGGC+GGG + chr1_1:13569841-13569860 Msa0009290:three_prime_UTR 55.0%
GTTTGCCCTGCACCTTGTGA+AGG + chr1_1:13569863-13569882 Msa0009290:three_prime_UTR 55.0%
GTTCTCTTGACAGGAGGTCG+TGG - chr1_1:13569983-13570002 None:intergenic 55.0%
CGACCTCCTGTCAAGAGAAC+TGG + chr1_1:13569983-13570002 Msa0009290:three_prime_UTR 55.0%
TGGAAGTGGACCATCAGGCT+TGG + chr1_1:13570207-13570226 Msa0009290:three_prime_UTR 55.0%
GGATCTTCCTGTGCCTGGAA+GGG + chr1_1:13570601-13570620 Msa0009290:three_prime_UTR 55.0%
ACTCCTGATAGCTCCCTTCC+AGG - chr1_1:13570617-13570636 None:intergenic 55.0%
CATCTCTGCCAAGGGCAAGA+AGG + chr1_1:13570709-13570728 Msa0009290:three_prime_UTR 55.0%
TGCCAAGGGCAAGAAGGTTG+TGG + chr1_1:13570715-13570734 Msa0009290:three_prime_UTR 55.0%
GACCACAACCTTCTTGCCCT+TGG - chr1_1:13570720-13570739 None:intergenic 55.0%
GAAGGTTGTGGTCATTGGCG+GGG + chr1_1:13570727-13570746 Msa0009290:three_prime_UTR 55.0%
AAGGTTGTGGTCATTGGCGG+GGG + chr1_1:13570728-13570747 Msa0009290:three_prime_UTR 55.0%
! GTTGACGGGGTATTTGCAGC+CGG + chr1_1:13571561-13571580 Msa0009290:three_prime_UTR 55.0%
! TTGACGGGGTATTTGCAGCC+GGG + chr1_1:13571562-13571581 Msa0009290:three_prime_UTR 55.0%
TATTTGCAGCCGGGGACTGT+CGG + chr1_1:13571571-13571590 Msa0009290:three_prime_UTR 55.0%
GGGTCAGTCACTGGTGGTAT+GGG + chr1_1:13571596-13571615 Msa0009290:three_prime_UTR 55.0%
CCTGATTCCCACCAATACCG+TGG - chr1_1:13571680-13571699 None:intergenic 55.0%
!! CCACGGTATTGGTGGGAATC+AGG + chr1_1:13571677-13571696 Msa0009290:three_prime_UTR 55.0%
CTCGTTTGCGTCCGTTAGCG+AGG + chr1_1:13560046-13560065 Msa0009290:CDS 60.0%
GCGATGTTCTGCCACGTGTG+TGG + chr1_1:13560074-13560093 Msa0009290:CDS 60.0%
GTTCTGCCACGTGTGTGGAG+AGG + chr1_1:13560079-13560098 Msa0009290:CDS 60.0%
!! GGGAATCCGGTGGATTAGGG+AGG + chr1_1:13560160-13560179 Msa0009290:CDS 60.0%
CGGCAACCTCCCTAATCCAC+CGG - chr1_1:13560169-13560188 None:intergenic 60.0%
GAGGTTGCCGAAGCTCAGAG+TGG + chr1_1:13560179-13560198 Msa0009290:CDS 60.0%
GTTGCCGAAGCTCAGAGTGG+CGG + chr1_1:13560182-13560201 Msa0009290:CDS 60.0%
!! GTCGTCGTTTTCGGCTGTGC+CGG + chr1_1:13560209-13560228 Msa0009290:CDS 60.0%
GGCTGTGCCGGATAAACCGA+TGG + chr1_1:13560221-13560240 Msa0009290:CDS 60.0%
GTTGGGCACGATCCCAGCTA+GGG - chr1_1:13563667-13563686 None:intergenic 60.0%
GCTCTGATGGAGCCATGGGA+TGG + chr1_1:13564404-13564423 Msa0009290:three_prime_UTR 60.0%
TGGGTGACATAGAAGCGGCC+AGG - chr1_1:13564585-13564604 None:intergenic 60.0%
AAGGCGGTGGCACTGTTCCT+CGG - chr1_1:13565368-13565387 None:intergenic 60.0%
GCTGGACTGCCTTGGGAACT+TGG + chr1_1:13567633-13567652 Msa0009290:three_prime_UTR 60.0%
TGCACCAAGAAGGGCGGCTA+TGG - chr1_1:13567754-13567773 None:intergenic 60.0%
GCACTGTATGGGGCAACACG+TGG + chr1_1:13568506-13568525 Msa0009290:three_prime_UTR 60.0%
GTATGGGGCAACACGTGGTG+AGG + chr1_1:13568511-13568530 Msa0009290:three_prime_UTR 60.0%
GGGGCTCAGGCTGTAGTTGA+AGG + chr1_1:13568581-13568600 Msa0009290:three_prime_UTR 60.0%
AGATGCAGTGGAGCAGGCTG+CGG + chr1_1:13568955-13568974 Msa0009290:three_prime_UTR 60.0%
! TCTGCCCGTTGCATGGACTG+TGG + chr1_1:13569597-13569616 Msa0009290:three_prime_UTR 60.0%
CAAACCCGCCCAGTGAACTC+AGG - chr1_1:13569848-13569867 None:intergenic 60.0%
TCTGCAGCTGCCAAGCCTGA+TGG - chr1_1:13570220-13570239 None:intergenic 60.0%
TGCAGGGATCTTCCTGTGCC+TGG + chr1_1:13570596-13570615 Msa0009290:intron 60.0%
GGGATCTTCCTGTGCCTGGA+AGG + chr1_1:13570600-13570619 Msa0009290:intron 60.0%
GATAGCTCCCTTCCAGGCAC+AGG - chr1_1:13570611-13570630 None:intergenic 60.0%
GTGCCTGGAAGGGAGCTATC+AGG + chr1_1:13570611-13570630 Msa0009290:three_prime_UTR 60.0%
! TGACGGGGTATTTGCAGCCG+GGG + chr1_1:13571563-13571582 Msa0009290:three_prime_UTR 60.0%
GGGGTCAGTCACTGGTGGTA+TGG + chr1_1:13571595-13571614 Msa0009290:three_prime_UTR 60.0%
GGTTGGGCACGATCCCAGCT+AGG - chr1_1:13563668-13563687 None:intergenic 65.0%
GTGGCCATAGCCGCCCTTCT+TGG + chr1_1:13567747-13567766 Msa0009290:three_prime_UTR 65.0%
TCTGGCCGCAGTTCAGCTGC+AGG - chr1_1:13568089-13568108 None:intergenic 65.0%
GCTCCAGGTTGCACCGAGAC+TGG - chr1_1:13568733-13568752 None:intergenic 65.0%
GGCTCCCAAGAGGCCAAGTC+AGG + chr1_1:13569437-13569456 Msa0009290:intron 65.0%
GTCATTGGCGGGGGTGACAC+TGG + chr1_1:13570737-13570756 Msa0009290:three_prime_UTR 65.0%
TCCCTCAGCCACCACCAACC+AGG + chr1_1:13570822-13570841 Msa0009290:three_prime_UTR 65.0%
!! CCCTGGTTGGTGGTGGCTGA+GGG - chr1_1:13570826-13570845 None:intergenic 65.0%
CCCTCAGCCACCACCAACCA+GGG + chr1_1:13570823-13570842 Msa0009290:three_prime_UTR 65.0%
TTGCCTGAGGCCCTGGTTGG+TGG - chr1_1:13570836-13570855 None:intergenic 65.0%
! CTGAGGCCATGGGTTGCCTG+AGG - chr1_1:13570849-13570868 None:intergenic 65.0%
CTCAGGCAACCCATGGCCTC+AGG + chr1_1:13570847-13570866 Msa0009290:three_prime_UTR 65.0%
CTCGGGGCCAAGGAATCCCA+TGG - chr1_1:13571185-13571204 None:intergenic 65.0%
CATGGGATTCCTTGGCCCCG+AGG + chr1_1:13571183-13571202 Msa0009290:three_prime_UTR 65.0%
TACTTACCGCCTCGGGGCCA+AGG - chr1_1:13571195-13571214 None:intergenic 65.0%
GCGGTGGCACTGTTCCTCGG+TGG - chr1_1:13565365-13565384 None:intergenic 70.0%
!! GCCCTGGTTGGTGGTGGCTG+AGG - chr1_1:13570827-13570846 None:intergenic 70.0%
!! CCTGAGGCCCTGGTTGGTGG+TGG - chr1_1:13570833-13570852 None:intergenic 70.0%
CCACCACCAACCAGGGCCTC+AGG + chr1_1:13570830-13570849 Msa0009290:three_prime_UTR 70.0%
GGGTTGCCTGAGGCCCTGGT+TGG - chr1_1:13570839-13570858 None:intergenic 70.0%
! CCATGGGTTGCCTGAGGCCC+TGG - chr1_1:13570843-13570862 None:intergenic 70.0%
CCAGGGCCTCAGGCAACCCA+TGG + chr1_1:13570840-13570859 Msa0009290:three_prime_UTR 70.0%
GGGATTCCTTGGCCCCGAGG+CGG + chr1_1:13571186-13571205 Msa0009290:three_prime_UTR 70.0%
TTGCAGCCGGGGACTGTCGG+CGG + chr1_1:13571574-13571593 Msa0009290:three_prime_UTR 70.0%
CTGTCGGCGGGGTCAGTCAC+TGG + chr1_1:13571587-13571606 Msa0009290:three_prime_UTR 70.0%
TCGGCGGGGTCAGTCACTGG+TGG + chr1_1:13571590-13571609 Msa0009290:three_prime_UTR 70.0%
TGCAGCCGGGGACTGTCGGC+GGG + chr1_1:13571575-13571594 Msa0009290:three_prime_UTR 75.0%
CTGACCCCGCCGACAGTCCC+CGG - chr1_1:13571583-13571602 None:intergenic 75.0%
! GCAGCCGGGGACTGTCGGCG+GGG + chr1_1:13571576-13571595 Msa0009290:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 13559973 13572254 13559973 ID=Msa0009290;Name=Msa0009290
chr1_1 mRNA 13559973 13572254 13559973 ID=Msa0009290-mRNA-1;Parent=Msa0009290;Name=Msa0009290-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.9|0.85|1|0.95|0.90|21|6545|333
chr1_1 exon 13559973 13560281 13559973 ID=Msa0009290-mRNA-1:exon:5125;Parent=Msa0009290-mRNA-1
chr1_1 exon 13560619 13560742 13560619 ID=Msa0009290-mRNA-1:exon:5126;Parent=Msa0009290-mRNA-1
chr1_1 exon 13561934 13562085 13561934 ID=Msa0009290-mRNA-1:exon:5127;Parent=Msa0009290-mRNA-1
chr1_1 exon 13562497 13562649 13562497 ID=Msa0009290-mRNA-1:exon:5128;Parent=Msa0009290-mRNA-1
chr1_1 exon 13562861 13562961 13562861 ID=Msa0009290-mRNA-1:exon:5129;Parent=Msa0009290-mRNA-1
chr1_1 exon 13563072 13563744 13563072 ID=Msa0009290-mRNA-1:exon:5130;Parent=Msa0009290-mRNA-1
chr1_1 exon 13564077 13564180 13564077 ID=Msa0009290-mRNA-1:exon:5131;Parent=Msa0009290-mRNA-1
chr1_1 exon 13564264 13564443 13564264 ID=Msa0009290-mRNA-1:exon:5132;Parent=Msa0009290-mRNA-1
chr1_1 exon 13564532 13564875 13564532 ID=Msa0009290-mRNA-1:exon:5133;Parent=Msa0009290-mRNA-1
chr1_1 exon 13564960 13565030 13564960 ID=Msa0009290-mRNA-1:exon:5134;Parent=Msa0009290-mRNA-1
chr1_1 exon 13565123 13565592 13565123 ID=Msa0009290-mRNA-1:exon:5135;Parent=Msa0009290-mRNA-1
chr1_1 exon 13565684 13566553 13565684 ID=Msa0009290-mRNA-1:exon:5136;Parent=Msa0009290-mRNA-1
chr1_1 exon 13566779 13566933 13566779 ID=Msa0009290-mRNA-1:exon:5137;Parent=Msa0009290-mRNA-1
chr1_1 exon 13567218 13567379 13567218 ID=Msa0009290-mRNA-1:exon:5138;Parent=Msa0009290-mRNA-1
chr1_1 exon 13567477 13569081 13567477 ID=Msa0009290-mRNA-1:exon:5139;Parent=Msa0009290-mRNA-1
chr1_1 exon 13569438 13569638 13569438 ID=Msa0009290-mRNA-1:exon:5140;Parent=Msa0009290-mRNA-1
chr1_1 exon 13569737 13570005 13569737 ID=Msa0009290-mRNA-1:exon:5141;Parent=Msa0009290-mRNA-1
chr1_1 exon 13570189 13570494 13570189 ID=Msa0009290-mRNA-1:exon:5142;Parent=Msa0009290-mRNA-1
chr1_1 exon 13570601 13570868 13570601 ID=Msa0009290-mRNA-1:exon:5143;Parent=Msa0009290-mRNA-1
chr1_1 exon 13570950 13571207 13570950 ID=Msa0009290-mRNA-1:exon:5144;Parent=Msa0009290-mRNA-1
chr1_1 exon 13571483 13572254 13571483 ID=Msa0009290-mRNA-1:exon:5145;Parent=Msa0009290-mRNA-1
chr1_1 CDS 13559973 13560281 13559973 ID=Msa0009290-mRNA-1:cds;Parent=Msa0009290-mRNA-1
chr1_1 CDS 13560619 13560742 13560619 ID=Msa0009290-mRNA-1:cds;Parent=Msa0009290-mRNA-1
chr1_1 CDS 13561934 13562085 13561934 ID=Msa0009290-mRNA-1:cds;Parent=Msa0009290-mRNA-1
chr1_1 CDS 13562497 13562649 13562497 ID=Msa0009290-mRNA-1:cds;Parent=Msa0009290-mRNA-1
chr1_1 CDS 13562861 13562961 13562861 ID=Msa0009290-mRNA-1:cds;Parent=Msa0009290-mRNA-1
chr1_1 CDS 13563072 13563234 13563072 ID=Msa0009290-mRNA-1:cds;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13563235 13563744 13563235 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13564077 13564180 13564077 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13564264 13564443 13564264 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13564532 13564875 13564532 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13564960 13565030 13564960 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13565123 13565592 13565123 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13565684 13566553 13565684 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13566779 13566933 13566779 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13567218 13567379 13567218 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13567477 13569081 13567477 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13569438 13569638 13569438 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13569737 13570005 13569737 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13570189 13570494 13570189 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13570601 13570868 13570601 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13570950 13571207 13570950 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
chr1_1 three_prime_UTR 13571483 13572254 13571483 ID=Msa0009290-mRNA-1:three_prime_utr;Parent=Msa0009290-mRNA-1
Gene Sequence

>Msa0009290

ATGTCGAATTCTCTTTCGTTAACGTTTACGGCGTTAAACAATCCTCAGATAAACGCTATAAGTAACCCTAACGCTCGTTTGCGTCCGTTAGCGAGGGTTACGCGATGTTCTGCCACGTGTGTGGAGAGGAAGAGATGGTTAGGGACGAAATTGCGAAGTGGTGGTGGTTTGGAGAGGATTCAGTTATGGGAATCCGGTGGATTAGGGAGGTTGCCGAAGCTCAGAGTGGCGGTTAAGTCGTCGTTTTCGGCTGTGCCGGATAAACCGATGGGACTTTATGATCCGGCTTTTGATAAAGATTCTTGTGGCGTAACTGATGCTTTGGAGATGTTGGTTAGGATGACACATAGAGGTGCTTGTGGATGTGAAGCAAATACCGGTGATGGTGCTGGTATACTTGTGGCTTTGCCTCATGGCTTCTACCAAGAGGCACTTATATTGAAAGAAGCTGATGATTGCAATGGGTTTGCCTTGTTACAGGTTGTGGATTTTCAGCTTCCTCCTCAAGGAAACTATGCAGTTGGCATGTTTTTCTTACCTAAATCCGATAGTCGGAGAAAGGAAAGCAAAAGTATATTTACTAAGGTTGCCGAGTCTCTTGGTCACAAGGTTCTTGGTTGGCGTTCTGTGCCCACAGATAACACAGGGTTGGGCAAATCAGCCCAGCTGACCGAACCAGTGATAGAACAAGTGTTTCTTACACCAAGTTCTGACTCAAAAGTTGATTTGGAGAAACAGATGTACATATTAAGGAAGCTAAGCATGGTTTCTATTACATCTGCATTAAACCTCCACAGCGACGGAATTACAGATTTCTATATCTGTTCACTTTCATCTAGGACTGTTATTTACAAAGGTCAGCTAACACCAGCTCAGTTGGGTGAATATTATTATGCAGATCTTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGGTAAATATTTTGCCCATTAACTCATCTTCTTCCTCCACTAACTCTATACTCCCACAAACAGCATAG
Protein sequence

>Msa0009290

MSNSLSLTFTALNNPQINAISNPNARLRPLARVTRCSATCVERKRWLGTKLRSGGGLERIQLWESGGLGRLPKLRVAVKSSFSAVPDKPMGLYDPAFDKDSCGVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHGFYQEALILKEADDCNGFALLQVVDFQLPPQGNYAVGMFFLPKSDSRRKESKSIFTKVAESLGHKVLGWRSVPTDNTGLGKSAQLTEPVIEQVFLTPSSDSKVDLEKQMYILRKLSMVSITSALNLHSDGITDFYICSLSSRTVIYKGQLTPAQLGEYYYADLGNERFTSYMALVNILPINSSSSSTNSILPQTA*