AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297220 MtrunA17_Chr4g0054331 92.617 149 11 0 1 149 1 149 8.90e-98 290
Msa1297220 MtrunA17_Chr4g0054331 96.364 110 4 0 233 342 141 250 5.46e-74 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297220 AT5G65840.1 72.973 111 30 0 233 343 165 275 3.59e-54 179
Msa1297220 AT5G65840.1 69.231 104 29 1 49 149 70 173 7.42e-42 147

Find 99 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTGAAGGTATTAGATTT+TGG 0.154519 8_3:-57209699 None:intergenic
CTGTCATGTTCAAAGATCTT+TGG 0.216394 8_3:+57209841 Msa1297220:CDS
AGGGGTAAGTGTGTGAATTC+GGG 0.243170 8_3:-57209656 None:intergenic
TTTGTAATTTATACAGTTAT+TGG 0.247744 8_3:+57213682 Msa1297220:three_prime_UTR
GAGGGGTAAGTGTGTGAATT+CGG 0.256228 8_3:-57209657 None:intergenic
TTCACACTCTCATCTATTCT+AGG 0.269138 8_3:+57209548 Msa1297220:five_prime_UTR
AGCAAGAATACGAGCTTTAT+TGG 0.271846 8_3:-57210932 None:intergenic
TACACTGGCTGGGTTGAAAA+AGG 0.282027 8_3:-57213044 None:intergenic
GCAAGAATACGAGCTTTATT+GGG 0.301563 8_3:-57210931 None:intergenic
CTGAAACCACATTCAGTTAC+TGG 0.304752 8_3:+57209457 None:intergenic
CAGAAAGAAGTCGTTTGTTT+CGG 0.314726 8_3:-57209737 None:intergenic
TTGTAAATTCGCTTAGCATT+AGG 0.320531 8_3:+57213535 Msa1297220:three_prime_UTR
TTTGACCTCTACTATGGATT+TGG 0.321070 8_3:+57213016 Msa1297220:CDS
TTGTAATTTATACAGTTATT+GGG 0.324930 8_3:+57213683 Msa1297220:three_prime_UTR
AGCTGCATCAAACCTTGATT+TGG 0.325737 8_3:-57210875 None:intergenic
TGTAATATGCTGTGGATATA+TGG 0.335742 8_3:+57213622 Msa1297220:three_prime_UTR
TGTCATGTTCAAAGATCTTT+GGG 0.351307 8_3:+57209842 Msa1297220:CDS
TGTTCTTCTTAGTTGGGAAC+TGG 0.353355 8_3:+57210834 Msa1297220:intron
GGAGGGATGTTTGTGTTTAG+AGG 0.357019 8_3:+57213400 Msa1297220:CDS
AGAAAGAAGTCGTTTGTTTC+GGG 0.362238 8_3:-57209736 None:intergenic
TAGATGAGAGTGTGAATTGA+AGG 0.403806 8_3:-57209541 None:intergenic
GTTCAAAGATCTTTGGGATC+AGG 0.419236 8_3:+57209848 Msa1297220:CDS
ATCCAGTACAGTTAAGCAAC+AGG 0.420603 8_3:-57213508 None:intergenic
TAAAGACAATCCATTGGAAA+TGG 0.422792 8_3:-57212877 None:intergenic
AAGGTAAAGCTTACACTGGC+TGG 0.424360 8_3:-57213055 None:intergenic
GCCTAGATTCTCTGCAATAG+TGG 0.432681 8_3:-57209787 None:intergenic
CTGTGCATTACCTTACGGTC+AGG 0.441657 8_3:-57212907 None:intergenic
AGTGGGGATGTAGGTTGGAC+AGG 0.444490 8_3:+57212038 Msa1297220:CDS
ATCATCCATACTGCTATCCT+TGG 0.453494 8_3:-57212701 None:intergenic
AGATCTTTGGGATCAGGAAC+AGG 0.458429 8_3:+57209854 Msa1297220:CDS
AATTGTATTCACAAGACTGC+TGG 0.459882 8_3:+57212075 Msa1297220:CDS
CTTGTATGATTCACAGTGAA+TGG 0.465733 8_3:-57213591 None:intergenic
CCCACTATTGCAGAGAATCT+AGG 0.467316 8_3:+57209786 Msa1297220:CDS
TTAAAGCCTCATAATTCCCT+AGG 0.467609 8_3:-57211008 None:intergenic
ATTTGCCAAGGATAGCAGTA+TGG 0.471309 8_3:+57212696 Msa1297220:CDS
TGCCTGTTGCTTAACTGTAC+TGG 0.471984 8_3:+57213506 Msa1297220:exon
CAGTGTTTGACTGTTTCCCT+AGG 0.482163 8_3:+57210991 Msa1297220:CDS
CATTGAAAGAATCCAAATCA+AGG 0.492034 8_3:+57210863 Msa1297220:CDS
GCCGATGAATGAAGATTTGA+AGG 0.493342 8_3:-57209712 None:intergenic
TGGGGTGTAGTGAATGGTAG+AGG 0.500971 8_3:-57209679 None:intergenic
GAGGGATGTTTGTGTTTAGA+GGG 0.508209 8_3:+57213401 Msa1297220:CDS
GGCACTTTGGATGCCCATGC+TGG 0.513878 8_3:+57210727 Msa1297220:CDS
GTATCGTGGGTTCAGGAAGT+GGG 0.514756 8_3:+57212021 Msa1297220:intron
TGTTCAGTTACCATTTCCAA+TGG 0.515281 8_3:+57212867 Msa1297220:intron
TGTTTCCCTAGGGAATTATG+AGG 0.515650 8_3:+57211002 Msa1297220:CDS
AGTGTTTGACTGTTTCCCTA+GGG 0.517627 8_3:+57210992 Msa1297220:CDS
ACCTTCAAATCTTCATTCAT+CGG 0.522192 8_3:+57209711 Msa1297220:CDS
AAATCAAGGTTTGATGCAGC+TGG 0.524810 8_3:+57210877 Msa1297220:CDS
AAAACACCACTTCTATCATC+TGG 0.525139 8_3:-57213268 None:intergenic
TCAAAATCAGAACAAATCAA+TGG 0.525218 8_3:+57209584 Msa1297220:exon
CAGGAAGTGGGGATGTAGGT+TGG 0.525590 8_3:+57212033 Msa1297220:intron
TCACACTCTCATCTATTCTA+GGG 0.529011 8_3:+57209549 Msa1297220:five_prime_UTR
TGTGCATTACCTTACGGTCA+GGG 0.538029 8_3:-57212906 None:intergenic
GTGGGGATGTAGGTTGGACA+GGG 0.539416 8_3:+57212039 Msa1297220:CDS
GGTTCAGGAAGTGGGGATGT+AGG 0.544894 8_3:+57212029 Msa1297220:intron
AAGCTAATTGCAGTGGGCGT+TGG 0.548964 8_3:+57210904 Msa1297220:CDS
GGGGTAAGTGTGTGAATTCG+GGG 0.552268 8_3:-57209655 None:intergenic
TTCTTCTTTCTTTGCCAGTG+AGG 0.554138 8_3:-57212143 None:intergenic
TAAAGCCTCATAATTCCCTA+GGG 0.554916 8_3:-57211007 None:intergenic
AGGTAAAGCTTACACTGGCT+GGG 0.557305 8_3:-57213054 None:intergenic
ATCGATGAACAGATCCTCAC+TGG 0.559993 8_3:+57212129 Msa1297220:CDS
CAAAGAAAGAAGAATGTGGC+TGG 0.565162 8_3:+57212152 Msa1297220:CDS
TTATGCAGACCCTGACCGTA+AGG 0.565546 8_3:+57212897 Msa1297220:CDS
GGTGTGATAGATGGATGAAA+AGG 0.565786 8_3:-57209633 None:intergenic
AGATCATTAGTTACCAGCAT+GGG 0.566257 8_3:-57210740 None:intergenic
GGAAAGAGCTATTATATGCA+AGG 0.568553 8_3:+57213422 Msa1297220:CDS
CAAGAATACGAGCTTTATTG+GGG 0.569412 8_3:-57210930 None:intergenic
GTGTAGTGAATGGTAGAGGA+GGG 0.571659 8_3:-57209675 None:intergenic
CCTAGATTCTCTGCAATAGT+GGG 0.580863 8_3:-57209786 None:intergenic
CTGCTGGAAGGATTCATTGT+GGG 0.584108 8_3:+57212091 Msa1297220:CDS
GCAAGGAAAGACGAAGGCAC+AGG 0.589567 8_3:+57213439 Msa1297220:CDS
TCTGCATAAAGACAATCCAT+TGG 0.596451 8_3:-57212883 None:intergenic
TCTGTGTTGCAAATTTGCCA+AGG 0.610759 8_3:+57212684 Msa1297220:CDS
TGGTGTCAAGCTAATTGCAG+TGG 0.616794 8_3:+57210897 Msa1297220:CDS
GGTGTAGTGAATGGTAGAGG+AGG 0.617740 8_3:-57209676 None:intergenic
TGAAATGACAAAGGAGGACA+AGG 0.621292 8_3:-57210970 None:intergenic
ATTCTTACAGGGAATAGCTG+TGG 0.623503 8_3:+57210692 Msa1297220:intron
AGTGAGGATCTGTTCATCGA+TGG 0.624580 8_3:-57212127 None:intergenic
CTGGCAAAGAAAGAAGAATG+TGG 0.624811 8_3:+57212148 Msa1297220:CDS
AAGATCATTAGTTACCAGCA+TGG 0.626138 8_3:-57210741 None:intergenic
GCCACTCCAGATGATAGAAG+TGG 0.626798 8_3:+57213262 Msa1297220:CDS
GGTGTCAAGCTAATTGCAGT+GGG 0.627555 8_3:+57210898 Msa1297220:CDS
ACCACTTCTATCATCTGGAG+TGG 0.632768 8_3:-57213263 None:intergenic
TTCGGCCAAATCCATAGTAG+AGG 0.635276 8_3:-57213021 None:intergenic
GGGTAAGTGTGTGAATTCGG+GGG 0.635427 8_3:-57209654 None:intergenic
CTTACAGGGAATAGCTGTGG+TGG 0.639248 8_3:+57210695 Msa1297220:intron
GTCAAACACTGAAATGACAA+AGG 0.639779 8_3:-57210979 None:intergenic
TATCGTGGGTTCAGGAAGTG+GGG 0.643186 8_3:+57212022 Msa1297220:intron
GTATTCACAAGACTGCTGGA+AGG 0.643788 8_3:+57212079 Msa1297220:CDS
ACCACATTCAGTTACTGGCG+TGG 0.648313 8_3:+57209462 None:intergenic
TGTAGTGAATGGTAGAGGAG+GGG 0.653187 8_3:-57209674 None:intergenic
CCCGCCACTGAAAATATCCG+TGG 0.667448 8_3:+57209501 Msa1297220:five_prime_UTR
TAGCTGTGAAGAGAGAGCCA+CGG 0.678890 8_3:-57209518 None:intergenic
GGTTGGACAGGGAAAGACTG+TGG 0.680938 8_3:+57212050 Msa1297220:CDS
ATGCAACATGTAATATGCTG+TGG 0.686630 8_3:+57213614 Msa1297220:three_prime_UTR
AAACACTGAAATGACAAAGG+AGG 0.688107 8_3:-57210976 None:intergenic
TTATATGCAAGGAAAGACGA+AGG 0.699801 8_3:+57213433 Msa1297220:CDS
AAGAATACGAGCTTTATTGG+GGG 0.731789 8_3:-57210929 None:intergenic
ACTGCTGGAAGGATTCATTG+TGG 0.741665 8_3:+57212090 Msa1297220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCACAATTTTTTTTTTTTT+TGG + chr8_3:57210107-57210126 Msa1297220:intron 10.0%
!! AAGATAAAATAAAGTTAAAT+TGG + chr8_3:57210493-57210512 Msa1297220:intron 10.0%
!! TCTAAAAAACTTAAAATTAT+TGG - chr8_3:57212555-57212574 None:intergenic 10.0%
!! TAATTTATGCAATTATTATA+TGG + chr8_3:57212784-57212803 Msa1297220:intron 10.0%
!! GAATTGAAATTAATTTATTC+TGG + chr8_3:57209944-57209963 Msa1297220:intron 15.0%
!!! TTTTTACTCTTTAAATGTTT+TGG + chr8_3:57210080-57210099 Msa1297220:intron 15.0%
!!! TTTTACTCTTTAAATGTTTT+GGG + chr8_3:57210081-57210100 Msa1297220:intron 15.0%
!! GAATTGAAATTAATTTATTC+TGG + chr8_3:57209944-57209963 Msa1297220:intron 15.0%
!! ATTTATTATTTATCCAAGTA+AGG - chr8_3:57210409-57210428 None:intergenic 15.0%
!!! TTTTCTACTTTTCTTTATTA+AGG - chr8_3:57211548-57211567 None:intergenic 15.0%
!! CTATAATTAAAACTCATAAA+TGG - chr8_3:57212440-57212459 None:intergenic 15.0%
!!! TAATATTTTACTTTACAACT+TGG + chr8_3:57213340-57213359 Msa1297220:intron 15.0%
!!! AATATTTTACTTTACAACTT+GGG + chr8_3:57213341-57213360 Msa1297220:intron 15.0%
!!! GTAAAGAATTTTATCAATTT+AGG - chr8_3:57213370-57213389 None:intergenic 15.0%
!! TTTGTAATTTATACAGTTAT+TGG + chr8_3:57213682-57213701 Msa1297220:three_prime_UTR 15.0%
!! TTGTAATTTATACAGTTATT+GGG + chr8_3:57213683-57213702 Msa1297220:three_prime_UTR 15.0%
!!! ATTTGAAGGTATTAGATTTT+GGG - chr8_3:57209701-57209720 None:intergenic 20.0%
!!! TAGTTGGAATTAATTCATTT+TGG + chr8_3:57209891-57209910 Msa1297220:intron 20.0%
!!! AATTAGTTGAAATTGATTTG+AGG + chr8_3:57210214-57210233 Msa1297220:intron 20.0%
!!! TAGTTGGAATTAATTCATTT+TGG + chr8_3:57209891-57209910 Msa1297220:intron 20.0%
!!! TAGTTAGTATCTATTTTGAT+TGG - chr8_3:57210625-57210644 None:intergenic 20.0%
!! TACTAACTAGTTGAATTAAT+AGG + chr8_3:57210636-57210655 Msa1297220:intron 20.0%
!!! AATAGGTTGATGTTAATATT+TGG + chr8_3:57210653-57210672 Msa1297220:intron 20.0%
!!! TTAATTTGATGATACTAGAT+TGG - chr8_3:57211115-57211134 None:intergenic 20.0%
!! TATTATTGTAAGAAAAGACA+TGG + chr8_3:57211242-57211261 Msa1297220:intron 20.0%
!!! ATATATTTTAAAATGCAGTG+TGG - chr8_3:57211382-57211401 None:intergenic 20.0%
!! TTAATAGAAAAAGACTGAAT+TGG + chr8_3:57211401-57211420 Msa1297220:intron 20.0%
!!! CTTTGATATATTTGTTCTTT+TGG + chr8_3:57211491-57211510 Msa1297220:intron 20.0%
!! GCATAAACAAAATATAAGTA+TGG + chr8_3:57211710-57211729 Msa1297220:intron 20.0%
!! TTGAAAATATTTGTGAAAGA+TGG + chr8_3:57211779-57211798 Msa1297220:intron 20.0%
!!! CTTTTCATTCCTTTATTTTT+TGG - chr8_3:57211938-57211957 None:intergenic 20.0%
!! AAAAATAAAGGAATGAAAAG+TGG + chr8_3:57211938-57211957 Msa1297220:intron 20.0%
!! AAACTATACTAGTAACAATA+AGG - chr8_3:57211968-57211987 None:intergenic 20.0%
!!! ATTTGTGCATATTTTTCATA+AGG - chr8_3:57212268-57212287 None:intergenic 20.0%
!!! TTTTTGTTTCAAGTTATCTT+GGG + chr8_3:57212587-57212606 Msa1297220:intron 20.0%
!!! TTTTAAATTCACTTCATTGA+AGG + chr8_3:57212654-57212673 Msa1297220:intron 20.0%
!! TTTAAATTCACTTCATTGAA+GGG + chr8_3:57212655-57212674 Msa1297220:intron 20.0%
!! AGAAAAAGAAAATATCAGTT+GGG - chr8_3:57212835-57212854 None:intergenic 20.0%
!! TAGAAAAAGAAAATATCAGT+TGG - chr8_3:57212836-57212855 None:intergenic 20.0%
!!! AAAATTCTTTACATTTTGTC+AGG + chr8_3:57213378-57213397 Msa1297220:intron 20.0%
!!! AAATTCTTTACATTTTGTCA+GGG + chr8_3:57213379-57213398 Msa1297220:intron 20.0%
! TCAAAATCAGAACAAATCAA+TGG + chr8_3:57209584-57209603 Msa1297220:exon 25.0%
!!! TTTGAAGGTATTAGATTTTG+GGG - chr8_3:57209700-57209719 None:intergenic 25.0%
!!! GATTTGAAGGTATTAGATTT+TGG - chr8_3:57209702-57209721 None:intergenic 25.0%
! AGAATTAGTTCAAAGATCTT+TGG + chr8_3:57210010-57210029 Msa1297220:intron 25.0%
! GAATTAGTTCAAAGATCTTT+GGG + chr8_3:57210011-57210030 Msa1297220:intron 25.0%
!!! TTTTTTTTGGACCTAAATTG+TGG + chr8_3:57210120-57210139 Msa1297220:intron 25.0%
! TAAAGCAAAAACCACAATTT+AGG - chr8_3:57210134-57210153 None:intergenic 25.0%
!! AAATTGTGGTTTTTGCTTTA+TGG + chr8_3:57210134-57210153 Msa1297220:intron 25.0%
!!! TTTGAGGTTGATATATTAGT+TGG + chr8_3:57210230-57210249 Msa1297220:intron 25.0%
! TGATTAGAGTTAATTCTTAC+AGG + chr8_3:57210680-57210699 Msa1297220:intron 25.0%
! GATTAGAGTTAATTCTTACA+GGG + chr8_3:57210681-57210700 Msa1297220:intron 25.0%
!! ATTAATAACCAAAAGCACAA+AGG - chr8_3:57210769-57210788 None:intergenic 25.0%
!!! TTGTGCTTTTGGTTATTAAT+CGG + chr8_3:57210769-57210788 Msa1297220:intron 25.0%
!! AATATACTTTTATGCTACAG+CGG - chr8_3:57211194-57211213 None:intergenic 25.0%
! ATAGATCTTTACAGTATCTT+CGG + chr8_3:57211517-57211536 Msa1297220:intron 25.0%
!! TAATTTGTATATTGGCAGTT+TGG - chr8_3:57211627-57211646 None:intergenic 25.0%
!!! TGTGTGCTTAATTTGTATAT+TGG - chr8_3:57211635-57211654 None:intergenic 25.0%
! AATATACAAATTAAGCACAC+AGG + chr8_3:57211634-57211653 Msa1297220:intron 25.0%
! ATATACAAATTAAGCACACA+GGG + chr8_3:57211635-57211654 Msa1297220:intron 25.0%
! AAATCCATTTCAATGACTTT+GGG + chr8_3:57211673-57211692 Msa1297220:intron 25.0%
! AAATATAAGTATGGCAATAG+TGG + chr8_3:57211719-57211738 Msa1297220:intron 25.0%
!! ATATTTTCAAATCACTGTCA+TGG - chr8_3:57211769-57211788 None:intergenic 25.0%
! AAACTTAAAATTATTGGCCA+TGG - chr8_3:57212549-57212568 None:intergenic 25.0%
!!! GTTTTTGTTTCAAGTTATCT+TGG + chr8_3:57212586-57212605 Msa1297220:intron 25.0%
!! AGTATGGATGATCATTTTAA+TGG + chr8_3:57212712-57212731 Msa1297220:CDS 25.0%
!!! GATGATCATTTTAATGGATA+TGG + chr8_3:57212718-57212737 Msa1297220:CDS 25.0%
!! CTGATATTTTCTTTTTCTAC+TGG + chr8_3:57212837-57212856 Msa1297220:intron 25.0%
!! TTTACAAAATGAGTTCTAGT+AGG - chr8_3:57212952-57212971 None:intergenic 25.0%
!!! AATTTTTTTGACCTCTACTA+TGG + chr8_3:57213010-57213029 Msa1297220:CDS 25.0%
! GACTTCAAAATGATATTAAC+AGG + chr8_3:57213180-57213199 Msa1297220:intron 25.0%
! AAAATGATATTAACAGGCAA+AGG + chr8_3:57213186-57213205 Msa1297220:intron 25.0%
ACCTTCAAATCTTCATTCAT+CGG + chr8_3:57209711-57209730 Msa1297220:CDS 30.0%
TGTCATGTTCAAAGATCTTT+GGG + chr8_3:57209842-57209861 Msa1297220:CDS 30.0%
GGTCAGAATGATATATTAGT+TGG + chr8_3:57209875-57209894 Msa1297220:intron 30.0%
TCAACACAACATTAACAAAC+AGG - chr8_3:57210181-57210200 None:intergenic 30.0%
! TTTGAAGTTGTATCAGATCA+AGG + chr8_3:57210383-57210402 Msa1297220:intron 30.0%
! AATAAGTTGAAACCAGCTTA+TGG + chr8_3:57210528-57210547 Msa1297220:intron 30.0%
!! TAAGTTTTGTGAGGCTATTT+GGG - chr8_3:57210578-57210597 None:intergenic 30.0%
!! ATAAGTTTTGTGAGGCTATT+TGG - chr8_3:57210579-57210598 None:intergenic 30.0%
! GGTTGATGTTAATATTTGGT+TGG + chr8_3:57210657-57210676 Msa1297220:intron 30.0%
!! TGTGCTTTTGGTTATTAATC+GGG + chr8_3:57210770-57210789 Msa1297220:intron 30.0%
CATTGAAAGAATCCAAATCA+AGG + chr8_3:57210863-57210882 Msa1297220:CDS 30.0%
! AGTCTGTCTTTGAGTATTTT+AGG + chr8_3:57211051-57211070 Msa1297220:intron 30.0%
! GTCTGTCTTTGAGTATTTTA+GGG + chr8_3:57211052-57211071 Msa1297220:intron 30.0%
!! TTACCTCTTTAGAGTAGTTT+CGG + chr8_3:57211079-57211098 Msa1297220:intron 30.0%
GAAATCCATTTCAATGACTT+TGG + chr8_3:57211672-57211691 Msa1297220:intron 30.0%
TTTACCCAAAGTCATTGAAA+TGG - chr8_3:57211680-57211699 None:intergenic 30.0%
TGAGTGAGACCAAAAAATAA+AGG + chr8_3:57211926-57211945 Msa1297220:intron 30.0%
! GTTACTAGTATAGTTTGTGA+TGG + chr8_3:57211972-57211991 Msa1297220:intron 30.0%
CATAAATGGCAAAAACAAAC+AGG - chr8_3:57212426-57212445 None:intergenic 30.0%
TAAAGACAATCCATTGGAAA+TGG - chr8_3:57212880-57212899 None:intergenic 30.0%
AAAATTGTATGCCTGAAAGA+AGG - chr8_3:57212996-57213015 None:intergenic 30.0%
! TTGTATTTCAGAAAAGTGCA+AGG - chr8_3:57213077-57213096 None:intergenic 30.0%
ATATTTACCAGCATGCAAAA+TGG - chr8_3:57213153-57213172 None:intergenic 30.0%
ATTTGATGCTTTGCAAAAAG+CGG + chr8_3:57213219-57213238 Msa1297220:CDS 30.0%
ACATCAAAAACATCGTCTAA+GGG - chr8_3:57213475-57213494 None:intergenic 30.0%
AACATCAAAAACATCGTCTA+AGG - chr8_3:57213476-57213495 None:intergenic 30.0%
TTGTAAATTCGCTTAGCATT+AGG + chr8_3:57213535-57213554 Msa1297220:three_prime_UTR 30.0%
TGTAATATGCTGTGGATATA+TGG + chr8_3:57213622-57213641 Msa1297220:three_prime_UTR 30.0%
! TAGATGAGAGTGTGAATTGA+AGG - chr8_3:57209544-57209563 None:intergenic 35.0%
TTCACACTCTCATCTATTCT+AGG + chr8_3:57209548-57209567 Msa1297220:five_prime_UTR 35.0%
TCACACTCTCATCTATTCTA+GGG + chr8_3:57209549-57209568 Msa1297220:five_prime_UTR 35.0%
AGAAAGAAGTCGTTTGTTTC+GGG - chr8_3:57209739-57209758 None:intergenic 35.0%
CAGAAAGAAGTCGTTTGTTT+CGG - chr8_3:57209740-57209759 None:intergenic 35.0%
! TTAGTATTTTCACTGCTGCT+GGG + chr8_3:57209814-57209833 Msa1297220:CDS 35.0%
CTGTCATGTTCAAAGATCTT+TGG + chr8_3:57209841-57209860 Msa1297220:CDS 35.0%
GTCATACTTTACTTACCTAC+AGG - chr8_3:57209988-57210007 None:intergenic 35.0%
ACAACATTAACAAACAGGAG+GGG - chr8_3:57210176-57210195 None:intergenic 35.0%
CACAACATTAACAAACAGGA+GGG - chr8_3:57210177-57210196 None:intergenic 35.0%
ACACAACATTAACAAACAGG+AGG - chr8_3:57210178-57210197 None:intergenic 35.0%
GTCATACTTTACTTACCTAC+AGG - chr8_3:57209988-57210007 None:intergenic 35.0%
!! CTACTGACATAAGTTTTGTG+AGG - chr8_3:57210587-57210606 None:intergenic 35.0%
AGATCATTAGTTACCAGCAT+GGG - chr8_3:57210743-57210762 None:intergenic 35.0%
AAGATCATTAGTTACCAGCA+TGG - chr8_3:57210744-57210763 None:intergenic 35.0%
ACTGATAGTTGTTCTTACTG+TGG + chr8_3:57210802-57210821 Msa1297220:intron 35.0%
TGTCTTCTGTTCTTCTTAGT+TGG + chr8_3:57210827-57210846 Msa1297220:intron 35.0%
GTCTTCTGTTCTTCTTAGTT+GGG + chr8_3:57210828-57210847 Msa1297220:intron 35.0%
!! AAGAATACGAGCTTTATTGG+GGG - chr8_3:57210932-57210951 None:intergenic 35.0%
!! CAAGAATACGAGCTTTATTG+GGG - chr8_3:57210933-57210952 None:intergenic 35.0%
!! GCAAGAATACGAGCTTTATT+GGG - chr8_3:57210934-57210953 None:intergenic 35.0%
! AGCAAGAATACGAGCTTTAT+TGG - chr8_3:57210935-57210954 None:intergenic 35.0%
AAACACTGAAATGACAAAGG+AGG - chr8_3:57210979-57210998 None:intergenic 35.0%
GTCAAACACTGAAATGACAA+AGG - chr8_3:57210982-57211001 None:intergenic 35.0%
TAAAGCCTCATAATTCCCTA+GGG - chr8_3:57211010-57211029 None:intergenic 35.0%
TTAAAGCCTCATAATTCCCT+AGG - chr8_3:57211011-57211030 None:intergenic 35.0%
GATGAGCCAAAGTTGTTAAA+AGG + chr8_3:57211330-57211349 Msa1297220:intron 35.0%
! GAAGAGCCTTTTAACAACTT+TGG - chr8_3:57211339-57211358 None:intergenic 35.0%
TTTCAAATCACTGTCATGGT+AGG - chr8_3:57211765-57211784 None:intergenic 35.0%
AGATGGAATGATTCTGACTT+AGG + chr8_3:57211796-57211815 Msa1297220:intron 35.0%
AATTGTATTCACAAGACTGC+TGG + chr8_3:57212075-57212094 Msa1297220:CDS 35.0%
AAATGACAGATCCATATGGT+GGG + chr8_3:57212284-57212303 Msa1297220:intron 35.0%
! AACTCACAGAAACTTCCTTT+TGG - chr8_3:57212352-57212371 None:intergenic 35.0%
! TACCAATTTGGAACAATCAG+TGG + chr8_3:57212393-57212412 Msa1297220:intron 35.0%
AAAAAGAGGTAAGTCGTACA+TGG - chr8_3:57212511-57212530 None:intergenic 35.0%
! ATGTACGACTTACCTCTTTT+TGG + chr8_3:57212510-57212529 Msa1297220:intron 35.0%
TCAAGTTATCTTGGGTTACT+AGG + chr8_3:57212595-57212614 Msa1297220:intron 35.0%
TCAAGTATATTCTGCCTCAA+CGG + chr8_3:57212619-57212638 Msa1297220:intron 35.0%
AATTAAACCACAAACCGTTG+AGG - chr8_3:57212636-57212655 None:intergenic 35.0%
TGTTCAGTTACCATTTCCAA+TGG + chr8_3:57212867-57212886 Msa1297220:intron 35.0%
TCTGCATAAAGACAATCCAT+TGG - chr8_3:57212886-57212905 None:intergenic 35.0%
GATATCTGTGCATTACCTTA+CGG - chr8_3:57212915-57212934 None:intergenic 35.0%
AACCAATTTCACCTTCTTTC+AGG + chr8_3:57212982-57213001 Msa1297220:intron 35.0%
TTTGACCTCTACTATGGATT+TGG + chr8_3:57213016-57213035 Msa1297220:CDS 35.0%
! ACAATTTCCATTTTGCATGC+TGG + chr8_3:57213143-57213162 Msa1297220:intron 35.0%
TTTGCATGCTGGTAAATATG+TGG + chr8_3:57213154-57213173 Msa1297220:intron 35.0%
AAAACACCACTTCTATCATC+TGG - chr8_3:57213271-57213290 None:intergenic 35.0%
GCAGGTTTGATACATTAATC+TGG + chr8_3:57213294-57213313 Msa1297220:intron 35.0%
GGTTTGATACATTAATCTGG+TGG + chr8_3:57213297-57213316 Msa1297220:intron 35.0%
! TTCTTTACATTTTGTCAGGG+AGG + chr8_3:57213382-57213401 Msa1297220:intron 35.0%
! TCTTTACATTTTGTCAGGGA+GGG + chr8_3:57213383-57213402 Msa1297220:intron 35.0%
GGAAAGAGCTATTATATGCA+AGG + chr8_3:57213422-57213441 Msa1297220:CDS 35.0%
TTATATGCAAGGAAAGACGA+AGG + chr8_3:57213433-57213452 Msa1297220:CDS 35.0%
ATCAAAAACATCGTCTAAGG+GGG - chr8_3:57213473-57213492 None:intergenic 35.0%
CATCAAAAACATCGTCTAAG+GGG - chr8_3:57213474-57213493 None:intergenic 35.0%
CTTGTATGATTCACAGTGAA+TGG - chr8_3:57213594-57213613 None:intergenic 35.0%
ATGCAACATGTAATATGCTG+TGG + chr8_3:57213614-57213633 Msa1297220:three_prime_UTR 35.0%
GGTGTGATAGATGGATGAAA+AGG - chr8_3:57209636-57209655 None:intergenic 40.0%
!!! AGATTTTGGGGTGTAGTGAA+TGG - chr8_3:57209688-57209707 None:intergenic 40.0%
GCCGATGAATGAAGATTTGA+AGG - chr8_3:57209715-57209734 None:intergenic 40.0%
CCTAGATTCTCTGCAATAGT+GGG - chr8_3:57209789-57209808 None:intergenic 40.0%
! GTTAGTATTTTCACTGCTGC+TGG + chr8_3:57209813-57209832 Msa1297220:CDS 40.0%
! TAGTATTTTCACTGCTGCTG+GGG + chr8_3:57209815-57209834 Msa1297220:CDS 40.0%
!! GTTCAAAGATCTTTGGGATC+AGG + chr8_3:57209848-57209867 Msa1297220:CDS 40.0%
! TCTGGTGTTAACCTAGTGTT+TGG + chr8_3:57209962-57209981 Msa1297220:intron 40.0%
!! GTTCAAAGATCTTTGGGATC+AGG + chr8_3:57209848-57209867 Msa1297220:CDS 40.0%
! TCTGGTGTTAACCTAGTGTT+TGG + chr8_3:57209962-57209981 Msa1297220:intron 40.0%
TATCAGATCAAGGCCTTACT+TGG + chr8_3:57210393-57210412 Msa1297220:intron 40.0%
AACAGACATTGTCCATAAGC+TGG - chr8_3:57210543-57210562 None:intergenic 40.0%
ATTCTTACAGGGAATAGCTG+TGG + chr8_3:57210692-57210711 Msa1297220:intron 40.0%
! GATCTTTGCCTTTGTGCTTT+TGG + chr8_3:57210758-57210777 Msa1297220:intron 40.0%
TGTTCTTCTTAGTTGGGAAC+TGG + chr8_3:57210834-57210853 Msa1297220:intron 40.0%
AGCTGCATCAAACCTTGATT+TGG - chr8_3:57210878-57210897 None:intergenic 40.0%
AAATCAAGGTTTGATGCAGC+TGG + chr8_3:57210877-57210896 Msa1297220:CDS 40.0%
TGAAATGACAAAGGAGGACA+AGG - chr8_3:57210973-57210992 None:intergenic 40.0%
AGTGTTTGACTGTTTCCCTA+GGG + chr8_3:57210992-57211011 Msa1297220:CDS 40.0%
TGTTTCCCTAGGGAATTATG+AGG + chr8_3:57211002-57211021 Msa1297220:CDS 40.0%
!! CTCTTTAGAGTAGTTTCGGA+CGG + chr8_3:57211083-57211102 Msa1297220:intron 40.0%
ACAAATTAAGCACACAGGGA+AGG + chr8_3:57211639-57211658 Msa1297220:intron 40.0%
GTATGGCAATAGTGGTTCAA+AGG + chr8_3:57211727-57211746 Msa1297220:intron 40.0%
AACACTAAAGAGCCTGATGA+TGG - chr8_3:57211851-57211870 None:intergenic 40.0%
TTCTTCTTTCTTTGCCAGTG+AGG - chr8_3:57212146-57212165 None:intergenic 40.0%
CTGGCAAAGAAAGAAGAATG+TGG + chr8_3:57212148-57212167 Msa1297220:CDS 40.0%
CAAAGAAAGAAGAATGTGGC+TGG + chr8_3:57212152-57212171 Msa1297220:CDS 40.0%
GCACAAATGACAGATCCATA+TGG + chr8_3:57212280-57212299 Msa1297220:intron 40.0%
CAAATGACAGATCCATATGG+TGG + chr8_3:57212283-57212302 Msa1297220:intron 40.0%
! CAGGGTAGGTTTTACCAATT+TGG + chr8_3:57212381-57212400 Msa1297220:intron 40.0%
! AGCCACTGATTGTTCCAAAT+TGG - chr8_3:57212398-57212417 None:intergenic 40.0%
!! GACTTACCTCTTTTTGGTGA+AGG + chr8_3:57212516-57212535 Msa1297220:intron 40.0%
!! TACCTCTTTTTGGTGAAGGT+AGG + chr8_3:57212520-57212539 Msa1297220:intron 40.0%
TTCCTACCTTCACCAAAAAG+AGG - chr8_3:57212525-57212544 None:intergenic 40.0%
TCTGTGTTGCAAATTTGCCA+AGG + chr8_3:57212684-57212703 Msa1297220:CDS 40.0%
ATTTGCCAAGGATAGCAGTA+TGG + chr8_3:57212696-57212715 Msa1297220:CDS 40.0%
ATCATCCATACTGCTATCCT+TGG - chr8_3:57212704-57212723 None:intergenic 40.0%
TGCCTGAAAGAAGGTGAAAT+TGG - chr8_3:57212987-57213006 None:intergenic 40.0%
GAGGGATGTTTGTGTTTAGA+GGG + chr8_3:57213401-57213420 Msa1297220:CDS 40.0%
ATCCAGTACAGTTAAGCAAC+AGG - chr8_3:57213511-57213530 None:intergenic 40.0%
! AGAGCCACGGATATTTTCAG+TGG - chr8_3:57209508-57209527 None:intergenic 45.0%
AGGGGTAAGTGTGTGAATTC+GGG - chr8_3:57209659-57209678 None:intergenic 45.0%
GAGGGGTAAGTGTGTGAATT+CGG - chr8_3:57209660-57209679 None:intergenic 45.0%
TGTAGTGAATGGTAGAGGAG+GGG - chr8_3:57209677-57209696 None:intergenic 45.0%
GTGTAGTGAATGGTAGAGGA+GGG - chr8_3:57209678-57209697 None:intergenic 45.0%
CCCACTATTGCAGAGAATCT+AGG + chr8_3:57209786-57209805 Msa1297220:CDS 45.0%
GCCTAGATTCTCTGCAATAG+TGG - chr8_3:57209790-57209809 None:intergenic 45.0%
!! AGATCTTTGGGATCAGGAAC+AGG + chr8_3:57209854-57209873 Msa1297220:CDS 45.0%
TAACCTAGTGTTTGGCCTGT+AGG + chr8_3:57209970-57209989 Msa1297220:intron 45.0%
TTACCTACAGGCCAAACACT+AGG - chr8_3:57209976-57209995 None:intergenic 45.0%
!! AGATCTTTGGGATCAGGAAC+AGG + chr8_3:57209854-57209873 Msa1297220:CDS 45.0%
TAACCTAGTGTTTGGCCTGT+AGG + chr8_3:57209970-57209989 Msa1297220:intron 45.0%
TTACCTACAGGCCAAACACT+AGG - chr8_3:57209976-57209995 None:intergenic 45.0%
! TAGCTGTGGTGGCACTTTTA+AGG + chr8_3:57210706-57210725 Msa1297220:CDS 45.0%
!!! GTGGCACTTTTAAGGCACTT+TGG + chr8_3:57210714-57210733 Msa1297220:CDS 45.0%
! TGGTGTCAAGCTAATTGCAG+TGG + chr8_3:57210897-57210916 Msa1297220:CDS 45.0%
GGTGTCAAGCTAATTGCAGT+GGG + chr8_3:57210898-57210917 Msa1297220:CDS 45.0%
CAGTGTTTGACTGTTTCCCT+AGG + chr8_3:57210991-57211010 Msa1297220:CDS 45.0%
! CGTCCGAAACTACTCTAAAG+AGG - chr8_3:57211085-57211104 None:intergenic 45.0%
! CTTTTATGCTACAGCGGTGA+AGG - chr8_3:57211188-57211207 None:intergenic 45.0%
AACATTTGACTCACGAGCCT+TGG + chr8_3:57211279-57211298 Msa1297220:intron 45.0%
TCTTGCAAAAGCTCTTGCCA+AGG - chr8_3:57211299-57211318 None:intergenic 45.0%
AGCACACAGGGAAGGAATAA+AGG + chr8_3:57211647-57211666 Msa1297220:intron 45.0%
!! AAGAGCCTGATGATGGTTAC+AGG - chr8_3:57211844-57211863 None:intergenic 45.0%
GCTAAGTGTTCAACCAAGTG+AGG + chr8_3:57211999-57212018 Msa1297220:intron 45.0%
!! TTCAACCAAGTGAGGTATCG+TGG + chr8_3:57212007-57212026 Msa1297220:intron 45.0%
!! TCAACCAAGTGAGGTATCGT+GGG + chr8_3:57212008-57212027 Msa1297220:intron 45.0%
GTATTCACAAGACTGCTGGA+AGG + chr8_3:57212079-57212098 Msa1297220:CDS 45.0%
ACTGCTGGAAGGATTCATTG+TGG + chr8_3:57212090-57212109 Msa1297220:CDS 45.0%
CTGCTGGAAGGATTCATTGT+GGG + chr8_3:57212091-57212110 Msa1297220:CDS 45.0%
AGTGAGGATCTGTTCATCGA+TGG - chr8_3:57212130-57212149 None:intergenic 45.0%
ATCGATGAACAGATCCTCAC+TGG + chr8_3:57212129-57212148 Msa1297220:CDS 45.0%
ATCAGCAAGGGAGATGACAT+GGG + chr8_3:57212202-57212221 Msa1297220:intron 45.0%
! TCTGTGAGTTGAAGAGATGC+AGG + chr8_3:57212362-57212381 Msa1297220:intron 45.0%
! CTGTGAGTTGAAGAGATGCA+GGG + chr8_3:57212363-57212382 Msa1297220:intron 45.0%
TTGGTGAAGGTAGGAATCCA+TGG + chr8_3:57212529-57212548 Msa1297220:intron 45.0%
TATTCTGCCTCAACGGTTTG+TGG + chr8_3:57212626-57212645 Msa1297220:intron 45.0%
TGTGCATTACCTTACGGTCA+GGG - chr8_3:57212909-57212928 None:intergenic 45.0%
TTCGGCCAAATCCATAGTAG+AGG - chr8_3:57213024-57213043 None:intergenic 45.0%
! TGGCTGGGTTGAAAAAGGTT+CGG - chr8_3:57213042-57213061 None:intergenic 45.0%
! TACACTGGCTGGGTTGAAAA+AGG - chr8_3:57213047-57213066 None:intergenic 45.0%
! AGGTAAAGCTTACACTGGCT+GGG - chr8_3:57213057-57213076 None:intergenic 45.0%
AAGGTAAAGCTTACACTGGC+TGG - chr8_3:57213058-57213077 None:intergenic 45.0%
GTGCAAGGTAAAGCTTACAC+TGG - chr8_3:57213062-57213081 None:intergenic 45.0%
ACCACTTCTATCATCTGGAG+TGG - chr8_3:57213266-57213285 None:intergenic 45.0%
! TAGAAGTGGTGTTTTGCAGC+AGG + chr8_3:57213276-57213295 Msa1297220:CDS 45.0%
GGAGGGATGTTTGTGTTTAG+AGG + chr8_3:57213400-57213419 Msa1297220:CDS 45.0%
! TGCCTGTTGCTTAACTGTAC+TGG + chr8_3:57213506-57213525 Msa1297220:exon 45.0%
!! GATATTTTCAGTGGCGGGAG+AGG - chr8_3:57209499-57209518 None:intergenic 50.0%
! CCACGGATATTTTCAGTGGC+GGG - chr8_3:57209504-57209523 None:intergenic 50.0%
! GCCACGGATATTTTCAGTGG+CGG - chr8_3:57209505-57209524 None:intergenic 50.0%
TAGCTGTGAAGAGAGAGCCA+CGG - chr8_3:57209521-57209540 None:intergenic 50.0%
! GAATTCGGGGGTGTGATAGA+TGG - chr8_3:57209645-57209664 None:intergenic 50.0%
GGGTAAGTGTGTGAATTCGG+GGG - chr8_3:57209657-57209676 None:intergenic 50.0%
GGGGTAAGTGTGTGAATTCG+GGG - chr8_3:57209658-57209677 None:intergenic 50.0%
GGTGTAGTGAATGGTAGAGG+AGG - chr8_3:57209679-57209698 None:intergenic 50.0%
TGGGGTGTAGTGAATGGTAG+AGG - chr8_3:57209682-57209701 None:intergenic 50.0%
GGATCAGGAACAGGTCAGAA+TGG + chr8_3:57209863-57209882 Msa1297220:intron 50.0%
CTTACAGGGAATAGCTGTGG+TGG + chr8_3:57210695-57210714 Msa1297220:intron 50.0%
AAGCTAATTGCAGTGGGCGT+TGG + chr8_3:57210904-57210923 Msa1297220:CDS 50.0%
! CAACTTTGGCTCATCAGCTG+TGG - chr8_3:57211325-57211344 None:intergenic 50.0%
AGCAGCCTGTAACCATCATC+AGG + chr8_3:57211836-57211855 Msa1297220:intron 50.0%
TGAACCCACGATACCTCACT+TGG - chr8_3:57212015-57212034 None:intergenic 50.0%
!! AAGTGAGGTATCGTGGGTTC+AGG + chr8_3:57212014-57212033 Msa1297220:intron 50.0%
GTATCGTGGGTTCAGGAAGT+GGG + chr8_3:57212021-57212040 Msa1297220:intron 50.0%
TATCGTGGGTTCAGGAAGTG+GGG + chr8_3:57212022-57212041 Msa1297220:intron 50.0%
AGCGTGATCCTCATCAGCAA+GGG + chr8_3:57212190-57212209 Msa1297220:intron 50.0%
TGTCATCTCCCTTGCTGATG+AGG - chr8_3:57212201-57212220 None:intergenic 50.0%
CATCAGCAAGGGAGATGACA+TGG + chr8_3:57212201-57212220 Msa1297220:intron 50.0%
! TGACAGATCCATATGGTGGG+TGG + chr8_3:57212287-57212306 Msa1297220:intron 50.0%
AGGAAGGGTTTGCCTTTGTG+AGG + chr8_3:57212319-57212338 Msa1297220:intron 50.0%
GGAAGGGTTTGCCTTTGTGA+GGG + chr8_3:57212320-57212339 Msa1297220:intron 50.0%
GAGTTGAAGAGATGCAGGGT+AGG + chr8_3:57212367-57212386 Msa1297220:intron 50.0%
TTATGCAGACCCTGACCGTA+AGG + chr8_3:57212897-57212916 Msa1297220:CDS 50.0%
CTGTGCATTACCTTACGGTC+AGG - chr8_3:57212910-57212929 None:intergenic 50.0%
GCCACTCCAGATGATAGAAG+TGG + chr8_3:57213262-57213281 Msa1297220:CDS 50.0%
CCCGCCACTGAAAATATCCG+TGG + chr8_3:57209501-57209520 Msa1297220:five_prime_UTR 55.0%
ACAGGCTGCTGAAGCTGACA+AGG - chr8_3:57211826-57211845 None:intergenic 55.0%
GGTATCGTGGGTTCAGGAAG+TGG + chr8_3:57212020-57212039 Msa1297220:intron 55.0%
GGTTCAGGAAGTGGGGATGT+AGG + chr8_3:57212029-57212048 Msa1297220:intron 55.0%
CAGGAAGTGGGGATGTAGGT+TGG + chr8_3:57212033-57212052 Msa1297220:intron 55.0%
! AGTGGGGATGTAGGTTGGAC+AGG + chr8_3:57212038-57212057 Msa1297220:CDS 55.0%
! GTGGGGATGTAGGTTGGACA+GGG + chr8_3:57212039-57212058 Msa1297220:CDS 55.0%
GGTTGGACAGGGAAAGACTG+TGG + chr8_3:57212050-57212069 Msa1297220:CDS 55.0%
CAGCGTGATCCTCATCAGCA+AGG + chr8_3:57212189-57212208 Msa1297220:intron 55.0%
GACACACTCCACCCACCATA+TGG - chr8_3:57212298-57212317 None:intergenic 55.0%
AGGGTTTGCCTTTGTGAGGG+AGG + chr8_3:57212323-57212342 Msa1297220:intron 55.0%
GTTTGCCTTTGTGAGGGAGG+TGG + chr8_3:57212326-57212345 Msa1297220:intron 55.0%
TTTGGCCACCTCCCTCACAA+AGG - chr8_3:57212334-57212353 None:intergenic 55.0%
TTGTGAGGGAGGTGGCCAAA+AGG + chr8_3:57212334-57212353 Msa1297220:intron 55.0%
! GCAAGGAAAGACGAAGGCAC+AGG + chr8_3:57213439-57213458 Msa1297220:CDS 55.0%
GGCACTTTGGATGCCCATGC+TGG + chr8_3:57210727-57210746 Msa1297220:CDS 60.0%
!! ATGGTGGGTGGAGTGTGTCG+AGG + chr8_3:57212299-57212318 Msa1297220:intron 60.0%
TGGGTGGAGTGTGTCGAGGA+AGG + chr8_3:57212303-57212322 Msa1297220:intron 60.0%
GGGTGGAGTGTGTCGAGGAA+GGG + chr8_3:57212304-57212323 Msa1297220:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 57209468 57213756 57209468 ID=Msa1297220;Name=Msa1297220
chr8_3 mRNA 57209468 57213756 57209468 ID=Msa1297220-mRNA-1;Parent=Msa1297220;Name=Msa1297220-mRNA-1;_AED=0.28;_eAED=0.28;_QI=135|0.62|0.66|0.77|1|1|9|237|343
chr8_3 exon 57209468 57209875 57209468 ID=Msa1297220-mRNA-1:exon:16442;Parent=Msa1297220-mRNA-1
chr8_3 exon 57210702 57210748 57210702 ID=Msa1297220-mRNA-1:exon:16443;Parent=Msa1297220-mRNA-1
chr8_3 exon 57210846 57211034 57210846 ID=Msa1297220-mRNA-1:exon:16444;Parent=Msa1297220-mRNA-1
chr8_3 exon 57212036 57212173 57212036 ID=Msa1297220-mRNA-1:exon:16445;Parent=Msa1297220-mRNA-1
chr8_3 exon 57212676 57212739 57212676 ID=Msa1297220-mRNA-1:exon:16446;Parent=Msa1297220-mRNA-1
chr8_3 exon 57212874 57212918 57212874 ID=Msa1297220-mRNA-1:exon:16447;Parent=Msa1297220-mRNA-1
chr8_3 exon 57213004 57213063 57213004 ID=Msa1297220-mRNA-1:exon:16448;Parent=Msa1297220-mRNA-1
chr8_3 exon 57213202 57213297 57213202 ID=Msa1297220-mRNA-1:exon:16449;Parent=Msa1297220-mRNA-1
chr8_3 exon 57213400 57213756 57213400 ID=Msa1297220-mRNA-1:exon:16450;Parent=Msa1297220-mRNA-1
chr8_3 five_prime_UTR 57209468 57209602 57209468 ID=Msa1297220-mRNA-1:five_prime_utr;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57209603 57209875 57209603 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57210702 57210748 57210702 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57210846 57211034 57210846 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57212036 57212173 57212036 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57212676 57212739 57212676 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57212874 57212918 57212874 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57213004 57213063 57213004 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57213202 57213297 57213202 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 CDS 57213400 57213519 57213400 ID=Msa1297220-mRNA-1:cds;Parent=Msa1297220-mRNA-1
chr8_3 three_prime_UTR 57213520 57213756 57213520 ID=Msa1297220-mRNA-1:three_prime_utr;Parent=Msa1297220-mRNA-1
Gene Sequence

>Msa1297220

ATGGCAACAACTCTACAATCTCTTCGATTTCCTTTTCATCCATCTATCACACCCCCGAATTCACACACTTACCCCTCCTCTACCATTCACTACACCCCAAAATCTAATACCTTCAAATCTTCATTCATCGGCACCCGAAACAAACGACTTCTTTCTGCTAGAGCTTCGACTTCACAGTATAGTCCCACTATTGCAGAGAATCTAGGCGATGTTAGTATTTTCACTGCTGCTGGGGAATCTGTCATGTTCAAAGATCTTTGGGATCAGGAACAGGGAATAGCTGTGGTGGCACTTTTAAGGCACTTTGGATGCCCATGCTGTTGGGAACTGGCTTCAACATTGAAAGAATCCAAATCAAGGTTTGATGCAGCTGGTGTCAAGCTAATTGCAGTGGGCGTTGGTGCCCCCAATAAAGCTCGTATTCTTGCTGAACGAGTAATGTTTCCTTGTCCTCCTTTGTCATTTCAGTGTTTGACTGTTTCCCTAGGGAATTATGAGGCTTTAAAAGAGAAGTGGGGATGTAGGTTGGACAGGGAAAGACTGTGGAAAATTGTATTCACAAGACTGCTGGAAGGATTCATTGTGGGTGAGATCAGTGTGCCATCGATGAACAGATCCTCACTGGCAAAGAAAGAAGAATGTGGCTGGGTCACTATCTGTGTTGCAAATTTGCCAAGGATAGCAGTATGGATGATCATTTTAATGGATATGTTACCATTTCCAATGGATTGTCTTTATGCAGACCCTGACCGTAAGGCATACAATTTTTTTGACCTCTACTATGGATTTGGCCGAACCTTTTTCAACCCAGCCAGTGCAAAGGTGTTATCGAGATTTGATGCTTTGCAAAAAGCGGTCAAGAACTATACAATAGAAGCCACTCCAGATGATAGAAGTGGTGTTTTGCAGCAGGGAGGGATGTTTGTGTTTAGAGGGAAAGAGCTATTATATGCAAGGAAAGACGAAGGCACAGGTGATCATGCCCCCTTAGACGATGTTTTTGATGTTTGCTGCAAAGTGCCTGTTGCTTAA

Protein sequence

>Msa1297220

MATTLQSLRFPFHPSITPPNSHTYPSSTIHYTPKSNTFKSSFIGTRNKRLLSARASTSQYSPTIAENLGDVSIFTAAGESVMFKDLWDQEQGIAVVALLRHFGCPCCWELASTLKESKSRFDAAGVKLIAVGVGAPNKARILAERVMFPCPPLSFQCLTVSLGNYEALKEKWGCRLDRERLWKIVFTRLLEGFIVGEISVPSMNRSSLAKKEECGWVTICVANLPRIAVWMIILMDMLPFPMDCLYADPDRKAYNFFDLYYGFGRTFFNPASAKVLSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGKELLYARKDEGTGDHAPLDDVFDVCCKVPVA*