AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1343450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1343450 MtrunA17_Chr4g0054331 92.617 149 11 0 1 149 1 149 8.90e-98 290
Msa1343450 MtrunA17_Chr4g0054331 96.364 110 4 0 233 342 141 250 5.95e-74 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1343450 AT5G65840.1 72.973 111 30 0 233 343 165 275 3.48e-54 179
Msa1343450 AT5G65840.1 69.231 104 29 1 49 149 70 173 6.74e-42 147

Find 98 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTGAAGGTATTAGATTT+TGG 0.154519 tig0006422:+22164 Msa1343450:intergenic
CTGTCATGTTCAAAGATCTT+TGG 0.216394 tig0006422:-22022 Msa1343450:CDS
AGGGGTAAGTGTGTGAATTC+GGG 0.243170 tig0006422:+22207 Msa1343450:intergenic
TTTGTAATTTATACAGTTAT+TGG 0.247744 tig0006422:-18536 Msa1343450:three_prime_UTR
GAGGGGTAAGTGTGTGAATT+CGG 0.256228 tig0006422:+22206 Msa1343450:intergenic
TTCACACTCTCATCTATTCT+AGG 0.269138 tig0006422:-22315 Msa1343450:five_prime_UTR
AGCAAGAATACGAGCTTTAT+TGG 0.271846 tig0006422:+21286 None:intergenic
TACACTGGCTGGGTTGAAAA+AGG 0.282027 tig0006422:+19174 None:intergenic
GCAAGAATACGAGCTTTATT+GGG 0.301563 tig0006422:+21287 None:intergenic
CTGAAACCACATTCAGTTAC+TGG 0.304752 tig0006422:-22406 None:intergenic
CAGAAAGAAGTCGTTTGTTT+CGG 0.314726 tig0006422:+22126 Msa1343450:intergenic
TTGTAAATTCGCTTAGCATT+AGG 0.320531 tig0006422:-18683 Msa1343450:three_prime_UTR
TTTGACCTCTACTATGGATT+TGG 0.321070 tig0006422:-19202 Msa1343450:CDS
TTGTAATTTATACAGTTATT+GGG 0.324930 tig0006422:-18535 Msa1343450:three_prime_UTR
AGCTGCATCAAACCTTGATT+TGG 0.325737 tig0006422:+21343 Msa1343450:intergenic
TGTAATATGCTGTGGATATA+TGG 0.335742 tig0006422:-18596 Msa1343450:three_prime_UTR
TGTCATGTTCAAAGATCTTT+GGG 0.351307 tig0006422:-22021 Msa1343450:CDS
TGTTCTTCTTAGTTGGGAAC+TGG 0.353355 tig0006422:-21384 Msa1343450:intron
GGAGGGATGTTTGTGTTTAG+AGG 0.357019 tig0006422:-18818 Msa1343450:CDS
AGAAAGAAGTCGTTTGTTTC+GGG 0.362238 tig0006422:+22127 Msa1343450:intergenic
TAGATGAGAGTGTGAATTGA+AGG 0.403806 tig0006422:+22322 Msa1343450:intergenic
GTTCAAAGATCTTTGGGATC+AGG 0.419236 tig0006422:-22015 Msa1343450:CDS
TAAAGACAATCCATTGGAAA+TGG 0.422792 tig0006422:+19341 Msa1343450:intergenic
AAGGTAAAGCTTACACTGGC+TGG 0.424360 tig0006422:+19163 Msa1343450:intergenic
GCCTAGATTCTCTGCAATAG+TGG 0.432681 tig0006422:+22076 Msa1343450:intergenic
CTGCTGGAAGGATTCATTGC+GGG 0.437132 tig0006422:-20127 Msa1343450:CDS
AGTGGGGATGTAGGTTGGAC+AGG 0.444490 tig0006422:-20180 Msa1343450:CDS
ATACAGTACAGTTAAGCAAC+AGG 0.447939 tig0006422:+18710 Msa1343450:intergenic
CCGTGCATTACCTTACGGTC+AGG 0.448777 tig0006422:+19311 Msa1343450:intergenic
ATCATCCATACTGCTATCCT+TGG 0.453494 tig0006422:+19517 Msa1343450:intergenic
AGATCTTTGGGATCAGGAAC+AGG 0.458429 tig0006422:-22009 Msa1343450:intron
AATTGTATTCACAAGACTGC+TGG 0.459882 tig0006422:-20143 Msa1343450:CDS
CTTGTATGATTCACAGTGAA+TGG 0.465733 tig0006422:+18627 Msa1343450:intergenic
CCCACTATTGCAGAGAATCT+AGG 0.467316 tig0006422:-22077 Msa1343450:CDS
TTAAAGCCTCATAATTCCCT+AGG 0.467609 tig0006422:+21210 Msa1343450:intergenic
ATTTGCCAAGGATAGCAGTA+TGG 0.471309 tig0006422:-19522 Msa1343450:CDS
CAGTGTTTGACTGTTTCCCT+AGG 0.482163 tig0006422:-21227 Msa1343450:CDS
CATTGAAAGAATCCAAATCA+AGG 0.492034 tig0006422:-21355 Msa1343450:CDS
GCCGATGAATGAAGATTTGA+AGG 0.493342 tig0006422:+22151 Msa1343450:intergenic
TGGGGTGTAGTGAATGGTAG+AGG 0.500971 tig0006422:+22184 Msa1343450:intergenic
GAGGGATGTTTGTGTTTAGA+GGG 0.508209 tig0006422:-18817 Msa1343450:CDS
GGCACTTTGGATGCCCATGC+TGG 0.513878 tig0006422:-21491 Msa1343450:intron
GTATCGTGGGTTCAGGAAGT+GGG 0.514756 tig0006422:-20197 Msa1343450:intron
TGTTCAGTTACCATTTCCAA+TGG 0.515281 tig0006422:-19351 Msa1343450:intron
TGTTTCCCTAGGGAATTATG+AGG 0.515650 tig0006422:-21216 Msa1343450:CDS
AGTGTTTGACTGTTTCCCTA+GGG 0.517627 tig0006422:-21226 Msa1343450:CDS
ACCTTCAAATCTTCATTCAT+CGG 0.522192 tig0006422:-22152 Msa1343450:CDS
AAATCAAGGTTTGATGCAGC+TGG 0.524810 tig0006422:-21341 Msa1343450:CDS
AAAACACCACTTCTATCATC+TGG 0.525139 tig0006422:+18950 Msa1343450:intergenic
TCAAAATCAGAACAAATCAA+TGG 0.525218 tig0006422:-22279 Msa1343450:exon
CAGGAAGTGGGGATGTAGGT+TGG 0.525590 tig0006422:-20185 Msa1343450:CDS
CGTGCATTACCTTACGGTCA+GGG 0.525659 tig0006422:+19312 Msa1343450:intergenic
TCACACTCTCATCTATTCTA+GGG 0.529011 tig0006422:-22314 Msa1343450:five_prime_UTR
GTGGGGATGTAGGTTGGACA+GGG 0.539416 tig0006422:-20179 Msa1343450:CDS
GGTTCAGGAAGTGGGGATGT+AGG 0.544894 tig0006422:-20189 Msa1343450:intron
AAGCTAATTGCAGTGGGCGT+TGG 0.548964 tig0006422:-21314 Msa1343450:CDS
GGGGTAAGTGTGTGAATTCG+GGG 0.552268 tig0006422:+22208 Msa1343450:intergenic
TTCTTCTTTCTTTGCCAGTG+AGG 0.554138 tig0006422:+20075 Msa1343450:intergenic
TAAAGCCTCATAATTCCCTA+GGG 0.554916 tig0006422:+21211 Msa1343450:intergenic
AGGTAAAGCTTACACTGGCT+GGG 0.557305 tig0006422:+19164 Msa1343450:intergenic
ATCGATGAACAGATCCTCAC+TGG 0.559993 tig0006422:-20089 Msa1343450:CDS
CAAAGAAAGAAGAATGTGGC+TGG 0.565162 tig0006422:-20066 Msa1343450:intron
TTATGCAGACCCTGACCGTA+AGG 0.565546 tig0006422:-19321 Msa1343450:intron
GGTGTGATAGATGGATGAAA+AGG 0.565786 tig0006422:+22230 Msa1343450:intergenic
AGATCATTAGTTACCAGCAT+GGG 0.566257 tig0006422:+21478 Msa1343450:intergenic
GGAAAGAGCTATTATATGCA+AGG 0.568553 tig0006422:-18796 Msa1343450:CDS
CAAGAATACGAGCTTTATTG+GGG 0.569412 tig0006422:+21288 Msa1343450:intergenic
GTGTAGTGAATGGTAGAGGA+GGG 0.571659 tig0006422:+22188 Msa1343450:intergenic
CCTAGATTCTCTGCAATAGT+GGG 0.580863 tig0006422:+22077 Msa1343450:intergenic
GCAAGGAAAGACGAAGGCAC+AGG 0.589567 tig0006422:-18779 Msa1343450:CDS
TCTGCATAAAGACAATCCAT+TGG 0.596451 tig0006422:+19335 Msa1343450:intergenic
TCTGTGTTGCAAATTTGCCA+AGG 0.610759 tig0006422:-19534 Msa1343450:CDS
TGGTGTCAAGCTAATTGCAG+TGG 0.616794 tig0006422:-21321 Msa1343450:CDS
GGTGTAGTGAATGGTAGAGG+AGG 0.617740 tig0006422:+22187 Msa1343450:intergenic
TGAAATGACAAAGGAGGACA+AGG 0.621292 tig0006422:+21248 Msa1343450:intergenic
ATTCTTACAGGGAATAGCTG+TGG 0.623503 tig0006422:-21526 Msa1343450:intron
AGTGAGGATCTGTTCATCGA+TGG 0.624580 tig0006422:+20091 Msa1343450:intergenic
CTGGCAAAGAAAGAAGAATG+TGG 0.624811 tig0006422:-20070 Msa1343450:CDS
AAGATCATTAGTTACCAGCA+TGG 0.626138 tig0006422:+21477 Msa1343450:intergenic
GCCACTCCAGATGATAGAAG+TGG 0.626798 tig0006422:-18956 Msa1343450:CDS
GGTGTCAAGCTAATTGCAGT+GGG 0.627555 tig0006422:-21320 Msa1343450:CDS
ACCACTTCTATCATCTGGAG+TGG 0.632768 tig0006422:+18955 Msa1343450:intergenic
TTCGGCCAAATCCATAGTAG+AGG 0.635276 tig0006422:+19197 Msa1343450:intergenic
GGGTAAGTGTGTGAATTCGG+GGG 0.635427 tig0006422:+22209 Msa1343450:intergenic
CTTACAGGGAATAGCTGTGG+TGG 0.639248 tig0006422:-21523 Msa1343450:intron
GTCAAACACTGAAATGACAA+AGG 0.639779 tig0006422:+21239 Msa1343450:intergenic
TATCGTGGGTTCAGGAAGTG+GGG 0.643186 tig0006422:-20196 Msa1343450:intron
GTATTCACAAGACTGCTGGA+AGG 0.643788 tig0006422:-20139 Msa1343450:CDS
ACCACATTCAGTTACTGGCG+TGG 0.648313 tig0006422:-22401 None:intergenic
TGTAGTGAATGGTAGAGGAG+GGG 0.653187 tig0006422:+22189 Msa1343450:intergenic
CCCGCCACTGAAAATATCCG+TGG 0.667448 tig0006422:-22362 Msa1343450:five_prime_UTR
TAGCTGTGAAGAGAGAGCCA+CGG 0.678890 tig0006422:+22345 Msa1343450:intergenic
GGTTGGACAGGGAAAGACTG+TGG 0.680938 tig0006422:-20168 Msa1343450:CDS
ATGCAACATGTAATATGCTG+TGG 0.686630 tig0006422:-18604 Msa1343450:three_prime_UTR
AAACACTGAAATGACAAAGG+AGG 0.688107 tig0006422:+21242 Msa1343450:intergenic
TTATATGCAAGGAAAGACGA+AGG 0.699801 tig0006422:-18785 Msa1343450:CDS
ACTGCTGGAAGGATTCATTG+CGG 0.724896 tig0006422:-20128 Msa1343450:CDS
AAGAATACGAGCTTTATTGG+GGG 0.731789 tig0006422:+21289 Msa1343440:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAAAATAAAGTTAAAT+TGG - tig0006422:19154-19173 Msa1343450:intron 10.0%
!! TCTAAAAAACTTAAAATTAT+TGG + tig0006422:21216-21235 Msa1343450:intergenic 10.0%
!! GAATTGAAATTAATTTATTC+TGG - tig0006422:18960-18979 Msa1343450:CDS 15.0%
!! ATTTATTATTTATCCAAGTA+AGG + tig0006422:19070-19089 Msa1343450:intergenic 15.0%
!!! TTTTCTACTTTTCTTTATTA+AGG + tig0006422:20209-20228 Msa1343450:intergenic 15.0%
!! CTATAATTAAAACTCATAAA+TGG + tig0006422:21101-21120 Msa1343450:intergenic 15.0%
!! TAATTTACGCAATTATTATA+TGG - tig0006422:21445-21464 Msa1343450:intron 15.0%
!!! TAATATTTTACTTTACAACT+TGG - tig0006422:22001-22020 Msa1343450:intron 15.0%
!!! AATATTTTACTTTACAACTT+GGG - tig0006422:22002-22021 Msa1343450:intron 15.0%
!!! GTAAAGAATTTTATCAATTT+AGG + tig0006422:22031-22050 Msa1343450:intergenic 15.0%
!! TTTGTAATTTATACAGTTAT+TGG - tig0006422:22343-22362 Msa1343450:five_prime_UTR 15.0%
!! TTGTAATTTATACAGTTATT+GGG - tig0006422:22344-22363 Msa1343450:five_prime_UTR 15.0%
!!! ATTTGAAGGTATTAGATTTT+GGG + tig0006422:18717-18736 Msa1343450:intergenic 20.0%
!!! TAGTTGGAATTAATTCATTT+TGG - tig0006422:18907-18926 Msa1343450:intron 20.0%
!!! TAGTTAGTATCTATTTTGAT+TGG + tig0006422:19286-19305 Msa1343450:intergenic 20.0%
!! TACTAACTAGTTGAATTAAT+AGG - tig0006422:19297-19316 Msa1343450:intron 20.0%
!!! TTAATTTGATGATACTAGAT+TGG + tig0006422:19776-19795 Msa1343450:intergenic 20.0%
!! TATTATTGTAAGAAAAGACA+TGG - tig0006422:19903-19922 Msa1343450:intron 20.0%
!!! ATATATTTTAAAATGCAGTG+TGG + tig0006422:20043-20062 Msa1343450:intergenic 20.0%
!! TTAATAGAAAAAGACTGAAT+TGG - tig0006422:20062-20081 Msa1343450:intron 20.0%
!!! CTTTGATATATTTGTTCTTT+TGG - tig0006422:20152-20171 Msa1343450:CDS 20.0%
!! TTGAAAATATTTGTGAAAGA+TGG - tig0006422:20440-20459 Msa1343450:intron 20.0%
!!! CTTTTCATTCCTTTATTTTT+TGG + tig0006422:20599-20618 Msa1343450:intergenic 20.0%
!! AAAAATAAAGGAATGAAAAG+TGG - tig0006422:20599-20618 Msa1343450:intron 20.0%
!! AAACTATACTAGTAACAATA+AGG + tig0006422:20629-20648 Msa1343450:intergenic 20.0%
!!! ATTTGTGCATATTTTTCATA+AGG + tig0006422:20929-20948 Msa1343450:intergenic 20.0%
!!! TTTTTGTTTCAAGTTATCTT+GGG - tig0006422:21248-21267 Msa1343450:CDS 20.0%
!!! TTTTAAATTCACTTCATTGA+AGG - tig0006422:21315-21334 Msa1343450:CDS 20.0%
!! TTTAAATTCACTTCATTGAA+GGG - tig0006422:21316-21335 Msa1343450:CDS 20.0%
!!! AAAATTCTTTACATTTTGTC+AGG - tig0006422:22039-22058 Msa1343450:CDS 20.0%
!!! AAATTCTTTACATTTTGTCA+GGG - tig0006422:22040-22059 Msa1343450:CDS 20.0%
! TCAAAATCAGAACAAATCAA+TGG - tig0006422:18600-18619 Msa1343450:three_prime_UTR 25.0%
!!! TTTGAAGGTATTAGATTTTG+GGG + tig0006422:18716-18735 Msa1343450:intergenic 25.0%
!!! GATTTGAAGGTATTAGATTT+TGG + tig0006422:18718-18737 Msa1343450:intergenic 25.0%
!!! AATAGGTTGATGTTAATATG+TGG - tig0006422:19314-19333 Msa1343450:intron 25.0%
! TGATTAGAGTTAATTCTTAC+AGG - tig0006422:19341-19360 Msa1343450:CDS 25.0%
! GATTAGAGTTAATTCTTACA+GGG - tig0006422:19342-19361 Msa1343450:CDS 25.0%
!! ATTAATAACCAAAAGCACAA+AGG + tig0006422:19430-19449 Msa1343450:intergenic 25.0%
!!! TTGTGCTTTTGGTTATTAAT+CGG - tig0006422:19430-19449 Msa1343450:intron 25.0%
!! AATATACTTTTATGCTACAG+CGG + tig0006422:19855-19874 Msa1343450:intergenic 25.0%
! ATAGATCTTTACAGTATCTT+CGG - tig0006422:20178-20197 Msa1343450:CDS 25.0%
!! TAATTTGTATATTGGCAGTT+TGG + tig0006422:20288-20307 Msa1343450:intergenic 25.0%
!!! TGTGTGCTTAATTTGTATAT+TGG + tig0006422:20296-20315 Msa1343450:intergenic 25.0%
! AATATACAAATTAAGCACAC+AGG - tig0006422:20295-20314 Msa1343450:intron 25.0%
! ATATACAAATTAAGCACACA+GGG - tig0006422:20296-20315 Msa1343450:intron 25.0%
! AAATCCATTTCAATGACTTT+GGG - tig0006422:20334-20353 Msa1343450:intron 25.0%
! AAATATAAGTATGCCAATAG+TGG - tig0006422:20380-20399 Msa1343450:intron 25.0%
!! ATATTTTCAAATCACTGTCA+TGG + tig0006422:20430-20449 Msa1343450:intergenic 25.0%
! AAACTTAAAATTATTGGCCA+TGG + tig0006422:21210-21229 Msa1343450:intergenic 25.0%
!!! GTTTTTGTTTCAAGTTATCT+TGG - tig0006422:21247-21266 Msa1343450:CDS 25.0%
!! AGTATGGATGATCATTTTAA+TGG - tig0006422:21373-21392 Msa1343450:CDS 25.0%
!!! GATGATCATTTTAATGGATA+TGG - tig0006422:21379-21398 Msa1343450:intron 25.0%
!! CTGATATTTTCTTTTTCTAC+TGG - tig0006422:21498-21517 Msa1343450:CDS 25.0%
!! TTTACAAAATGAGTTCTAGT+AGG + tig0006422:21613-21632 Msa1343450:intergenic 25.0%
!!! AATTTTTTTGACCTCTACTA+TGG - tig0006422:21671-21690 Msa1343450:intron 25.0%
! GACTTCAAAATGATATTAAC+AGG - tig0006422:21841-21860 Msa1343450:intron 25.0%
! AAAATGATATTAACAGGCAA+AGG - tig0006422:21847-21866 Msa1343450:intron 25.0%
ACCTTCAAATCTTCATTCAT+CGG - tig0006422:18727-18746 Msa1343450:CDS 30.0%
TGTCATGTTCAAAGATCTTT+GGG - tig0006422:18858-18877 Msa1343450:intron 30.0%
GGTCAGAATGATATATTAGT+TGG - tig0006422:18891-18910 Msa1343450:intron 30.0%
! TTTGAAGTTGTATCAGATCA+AGG - tig0006422:19044-19063 Msa1343450:intron 30.0%
! AATAAGTTGAAACCAGCTTA+TGG - tig0006422:19189-19208 Msa1343450:CDS 30.0%
!! TAAGTTTTGTGAGGCTATTT+GGG + tig0006422:19239-19258 Msa1343450:intergenic 30.0%
!! ATAAGTTTTGTGAGGCTATT+TGG + tig0006422:19240-19259 Msa1343450:intergenic 30.0%
!! TGTGCTTTTGGTTATTAATC+GGG - tig0006422:19431-19450 Msa1343450:intron 30.0%
CATTGAAAGAATCCAAATCA+AGG - tig0006422:19524-19543 Msa1343450:CDS 30.0%
! AGTCTGTCTTTGAGTATTTT+AGG - tig0006422:19712-19731 Msa1343450:intron 30.0%
! GTCTGTCTTTGAGTATTTTA+GGG - tig0006422:19713-19732 Msa1343450:intron 30.0%
!! TTACCTCTTTAGAGTAGTTT+CGG - tig0006422:19740-19759 Msa1343450:intron 30.0%
GAAATCCATTTCAATGACTT+TGG - tig0006422:20333-20352 Msa1343450:intron 30.0%
TTTACCCAAAGTCATTGAAA+TGG + tig0006422:20341-20360 Msa1343450:intergenic 30.0%
TGAGTGAGACCAAAAAATAA+AGG - tig0006422:20587-20606 Msa1343450:intron 30.0%
! GTTACTAGTATAGTTTGTGA+TGG - tig0006422:20633-20652 Msa1343450:intron 30.0%
CATAAATGGCAAAAACAAAC+AGG + tig0006422:21087-21106 Msa1343450:intergenic 30.0%
TAAAGACAATCCATTGGAAA+TGG + tig0006422:21541-21560 Msa1343450:intergenic 30.0%
AAAATTGTATGCCTGAAAGA+AGG + tig0006422:21657-21676 Msa1343450:intergenic 30.0%
! TTGTATTTCAGAAAAGTGCA+AGG + tig0006422:21738-21757 Msa1343450:intergenic 30.0%
! ATTTTTACCAGCATGCAAAA+TGG + tig0006422:21814-21833 Msa1343450:intergenic 30.0%
ATTTGATGCTTTGCAAAAAG+CGG - tig0006422:21880-21899 Msa1343450:intron 30.0%
ACATCAAAAACATCGTCTAA+GGG + tig0006422:22136-22155 Msa1343450:intergenic 30.0%
AACATCAAAAACATCGTCTA+AGG + tig0006422:22137-22156 Msa1343450:intergenic 30.0%
TTGTAAATTCGCTTAGCATT+AGG - tig0006422:22196-22215 Msa1343450:CDS 30.0%
TGTAATATGCTGTGGATATA+TGG - tig0006422:22283-22302 Msa1343450:five_prime_UTR 30.0%
! TAGATGAGAGTGTGAATTGA+AGG + tig0006422:18560-18579 Msa1343450:intergenic 35.0%
TTCACACTCTCATCTATTCT+AGG - tig0006422:18564-18583 Msa1343450:three_prime_UTR 35.0%
TCACACTCTCATCTATTCTA+GGG - tig0006422:18565-18584 Msa1343450:three_prime_UTR 35.0%
AGAAAGAAGTCGTTTGTTTC+GGG + tig0006422:18755-18774 Msa1343450:intergenic 35.0%
CAGAAAGAAGTCGTTTGTTT+CGG + tig0006422:18756-18775 Msa1343450:intergenic 35.0%
! TTAGTATTTTCACTGCTGCT+GGG - tig0006422:18830-18849 Msa1343450:intron 35.0%
CTGTCATGTTCAAAGATCTT+TGG - tig0006422:18857-18876 Msa1343450:intron 35.0%
GTCATACTTTACTTACCTAC+AGG + tig0006422:19004-19023 Msa1343450:intergenic 35.0%
!! CTACTGACATAAGTTTTGTG+AGG + tig0006422:19248-19267 Msa1343450:intergenic 35.0%
! GGTTGATGTTAATATGTGGT+TGG - tig0006422:19318-19337 Msa1343450:intron 35.0%
AGATCATTAGTTACCAGCAT+GGG + tig0006422:19404-19423 Msa1343450:intergenic 35.0%
AAGATCATTAGTTACCAGCA+TGG + tig0006422:19405-19424 Msa1343450:intergenic 35.0%
ACTGATAGTTGTTCTTACTG+TGG - tig0006422:19463-19482 Msa1343450:intron 35.0%
TGTCTTCTGTTCTTCTTAGT+TGG - tig0006422:19488-19507 Msa1343450:intron 35.0%
GTCTTCTGTTCTTCTTAGTT+GGG - tig0006422:19489-19508 Msa1343450:intron 35.0%
!! AAGAATACGAGCTTTATTGG+GGG + tig0006422:19593-19612 Msa1343450:intergenic 35.0%
!! CAAGAATACGAGCTTTATTG+GGG + tig0006422:19594-19613 Msa1343450:intergenic 35.0%
!! GCAAGAATACGAGCTTTATT+GGG + tig0006422:19595-19614 Msa1343450:intergenic 35.0%
! AGCAAGAATACGAGCTTTAT+TGG + tig0006422:19596-19615 Msa1343450:intergenic 35.0%
AAACACTGAAATGACAAAGG+AGG + tig0006422:19640-19659 Msa1343450:intergenic 35.0%
GTCAAACACTGAAATGACAA+AGG + tig0006422:19643-19662 Msa1343450:intergenic 35.0%
TAAAGCCTCATAATTCCCTA+GGG + tig0006422:19671-19690 Msa1343450:intergenic 35.0%
TTAAAGCCTCATAATTCCCT+AGG + tig0006422:19672-19691 Msa1343450:intergenic 35.0%
GATGAGCCAAAGTTGTTAAA+AGG - tig0006422:19991-20010 Msa1343450:intron 35.0%
! GAAGAGCCTTTTAACAACTT+TGG + tig0006422:20000-20019 Msa1343450:intergenic 35.0%
GTTATGATTACACAAGTGTC+TGG + tig0006422:20114-20133 Msa1343450:intergenic 35.0%
CTTATCCTTTGAACCACTAT+TGG + tig0006422:20396-20415 Msa1343450:intergenic 35.0%
TTTCAAATCACTGTCATGGT+AGG + tig0006422:20426-20445 Msa1343450:intergenic 35.0%
AGATGGAATGATTCTGACTT+AGG - tig0006422:20457-20476 Msa1343450:intron 35.0%
AATTGTATTCACAAGACTGC+TGG - tig0006422:20736-20755 Msa1343450:intron 35.0%
AAATGACAGATCCATATGGT+GGG - tig0006422:20945-20964 Msa1343450:intron 35.0%
! AACTCACAGAAACTTCCTTT+TGG + tig0006422:21013-21032 Msa1343450:intergenic 35.0%
! TACCAATTTGGAACAATCAG+TGG - tig0006422:21054-21073 Msa1343450:intron 35.0%
AAAAAGAGGTAAGTCGTACA+TGG + tig0006422:21172-21191 Msa1343450:intergenic 35.0%
! ATGTACGACTTACCTCTTTT+TGG - tig0006422:21171-21190 Msa1343450:intron 35.0%
TCAAGTTATCTTGGGTTACT+AGG - tig0006422:21256-21275 Msa1343450:CDS 35.0%
TCAAGTATATTCTGCCTCAA+CGG - tig0006422:21280-21299 Msa1343450:CDS 35.0%
AATTAAACCACAAACCGTTG+AGG + tig0006422:21297-21316 Msa1343450:intergenic 35.0%
TGTTCAGTTACCATTTCCAA+TGG - tig0006422:21528-21547 Msa1343450:intron 35.0%
TCTGCATAAAGACAATCCAT+TGG + tig0006422:21547-21566 Msa1343450:intergenic 35.0%
TTTGACCTCTACTATGGATT+TGG - tig0006422:21677-21696 Msa1343450:intron 35.0%
! ACAATTTCCATTTTGCATGC+TGG - tig0006422:21804-21823 Msa1343450:intron 35.0%
TTTGCATGCTGGTAAAAATG+TGG - tig0006422:21815-21834 Msa1343450:intron 35.0%
AAAACACCACTTCTATCATC+TGG + tig0006422:21932-21951 Msa1343450:intergenic 35.0%
GCAGGTTTGATACATTAATC+TGG - tig0006422:21955-21974 Msa1343450:intron 35.0%
GGTTTGATACATTAATCTGG+TGG - tig0006422:21958-21977 Msa1343450:intron 35.0%
! TTCTTTACATTTTGTCAGGG+AGG - tig0006422:22043-22062 Msa1343450:CDS 35.0%
! TCTTTACATTTTGTCAGGGA+GGG - tig0006422:22044-22063 Msa1343450:CDS 35.0%
GGAAAGAGCTATTATATGCA+AGG - tig0006422:22083-22102 Msa1343450:CDS 35.0%
TTATATGCAAGGAAAGACGA+AGG - tig0006422:22094-22113 Msa1343450:CDS 35.0%
ATCAAAAACATCGTCTAAGG+GGG + tig0006422:22134-22153 Msa1343450:intergenic 35.0%
CATCAAAAACATCGTCTAAG+GGG + tig0006422:22135-22154 Msa1343450:intergenic 35.0%
ATACAGTACAGTTAAGCAAC+AGG + tig0006422:22172-22191 Msa1343450:intergenic 35.0%
CTTGTATGATTCACAGTGAA+TGG + tig0006422:22255-22274 Msa1343450:intergenic 35.0%
ATGCAACATGTAATATGCTG+TGG - tig0006422:22275-22294 Msa1343450:exon 35.0%
GGTGTGATAGATGGATGAAA+AGG + tig0006422:18652-18671 Msa1343450:intergenic 40.0%
!!! AGATTTTGGGGTGTAGTGAA+TGG + tig0006422:18704-18723 Msa1343450:intergenic 40.0%
GCCGATGAATGAAGATTTGA+AGG + tig0006422:18731-18750 Msa1343450:intergenic 40.0%
CCTAGATTCTCTGCAATAGT+GGG + tig0006422:18805-18824 Msa1343450:intergenic 40.0%
! GTTAGTATTTTCACTGCTGC+TGG - tig0006422:18829-18848 Msa1343450:intron 40.0%
! TAGTATTTTCACTGCTGCTG+GGG - tig0006422:18831-18850 Msa1343450:intron 40.0%
!! GTTCAAAGATCTTTGGGATC+AGG - tig0006422:18864-18883 Msa1343450:intron 40.0%
! TCTGGTGTTAACCTAGTGTT+TGG - tig0006422:18978-18997 Msa1343450:CDS 40.0%
TATCAGATCAAGGCCTTACT+TGG - tig0006422:19054-19073 Msa1343450:intron 40.0%
AACAGACATTGTCCATAAGC+TGG + tig0006422:19204-19223 Msa1343450:intergenic 40.0%
ATTCTTACAGGGAATAGCTG+TGG - tig0006422:19353-19372 Msa1343450:intron 40.0%
! GATCTTTGCCTTTGTGCTTT+TGG - tig0006422:19419-19438 Msa1343450:intron 40.0%
TGTTCTTCTTAGTTGGGAAC+TGG - tig0006422:19495-19514 Msa1343450:intron 40.0%
AGCTGCATCAAACCTTGATT+TGG + tig0006422:19539-19558 Msa1343450:intergenic 40.0%
AAATCAAGGTTTGATGCAGC+TGG - tig0006422:19538-19557 Msa1343450:CDS 40.0%
TGAAATGACAAAGGAGGACA+AGG + tig0006422:19634-19653 Msa1343450:intergenic 40.0%
AGTGTTTGACTGTTTCCCTA+GGG - tig0006422:19653-19672 Msa1343450:intron 40.0%
TGTTTCCCTAGGGAATTATG+AGG - tig0006422:19663-19682 Msa1343450:intron 40.0%
!! CTCTTTAGAGTAGTTTCGGA+CGG - tig0006422:19744-19763 Msa1343450:intron 40.0%
ACAAATTAAGCACACAGGGA+AGG - tig0006422:20300-20319 Msa1343450:intron 40.0%
GTATGCCAATAGTGGTTCAA+AGG - tig0006422:20388-20407 Msa1343450:intron 40.0%
AACACTAAAGAGCCTGATGA+TGG + tig0006422:20512-20531 Msa1343450:intergenic 40.0%
TTCTTCTTTCTTTGCCAGTG+AGG + tig0006422:20807-20826 Msa1343450:intergenic 40.0%
CTGGCAAAGAAAGAAGAATG+TGG - tig0006422:20809-20828 Msa1343450:intron 40.0%
CAAAGAAAGAAGAATGTGGC+TGG - tig0006422:20813-20832 Msa1343450:intron 40.0%
GCACAAATGACAGATCCATA+TGG - tig0006422:20941-20960 Msa1343450:intron 40.0%
CAAATGACAGATCCATATGG+TGG - tig0006422:20944-20963 Msa1343450:intron 40.0%
! CAGGGTAGGTTTTACCAATT+TGG - tig0006422:21042-21061 Msa1343450:intron 40.0%
! AGCCACTGATTGTTCCAAAT+TGG + tig0006422:21059-21078 Msa1343450:intergenic 40.0%
!! GACTTACCTCTTTTTGGTGA+AGG - tig0006422:21177-21196 Msa1343450:intron 40.0%
!! TACCTCTTTTTGGTGAAGGT+AGG - tig0006422:21181-21200 Msa1343450:intron 40.0%
TTCCTACCTTCACCAAAAAG+AGG + tig0006422:21186-21205 Msa1343450:intergenic 40.0%
TCTGTGTTGCAAATTTGCCA+AGG - tig0006422:21345-21364 Msa1343450:CDS 40.0%
ATTTGCCAAGGATAGCAGTA+TGG - tig0006422:21357-21376 Msa1343450:CDS 40.0%
ATCATCCATACTGCTATCCT+TGG + tig0006422:21365-21384 Msa1343450:intergenic 40.0%
GATATCCGTGCATTACCTTA+CGG + tig0006422:21576-21595 Msa1343450:intergenic 40.0%
AACCAATTTCGCCTTCTTTC+AGG - tig0006422:21643-21662 Msa1343450:intron 40.0%
GAGGGATGTTTGTGTTTAGA+GGG - tig0006422:22062-22081 Msa1343450:CDS 40.0%
! AGAGCCACGGATATTTTCAG+TGG + tig0006422:18524-18543 Msa1343450:intergenic 45.0%
AGGGGTAAGTGTGTGAATTC+GGG + tig0006422:18675-18694 Msa1343450:intergenic 45.0%
GAGGGGTAAGTGTGTGAATT+CGG + tig0006422:18676-18695 Msa1343450:intergenic 45.0%
TGTAGTGAATGGTAGAGGAG+GGG + tig0006422:18693-18712 Msa1343450:intergenic 45.0%
GTGTAGTGAATGGTAGAGGA+GGG + tig0006422:18694-18713 Msa1343450:intergenic 45.0%
CCCACTATTGCAGAGAATCT+AGG - tig0006422:18802-18821 Msa1343450:CDS 45.0%
GCCTAGATTCTCTGCAATAG+TGG + tig0006422:18806-18825 Msa1343450:intergenic 45.0%
!! AGATCTTTGGGATCAGGAAC+AGG - tig0006422:18870-18889 Msa1343450:intron 45.0%
TAACCTAGTGTTTGGCCTGT+AGG - tig0006422:18986-19005 Msa1343450:CDS 45.0%
TTACCTACAGGCCAAACACT+AGG + tig0006422:18992-19011 Msa1343450:intergenic 45.0%
! TAGCTGTGGTGGCACTTTTA+AGG - tig0006422:19367-19386 Msa1343450:intron 45.0%
!!! GTGGCACTTTTAAGGCACTT+TGG - tig0006422:19375-19394 Msa1343450:intron 45.0%
! TGGTGTCAAGCTAATTGCAG+TGG - tig0006422:19558-19577 Msa1343450:intron 45.0%
GGTGTCAAGCTAATTGCAGT+GGG - tig0006422:19559-19578 Msa1343450:intron 45.0%
CAGTGTTTGACTGTTTCCCT+AGG - tig0006422:19652-19671 Msa1343450:intron 45.0%
! CGTCCGAAACTACTCTAAAG+AGG + tig0006422:19746-19765 Msa1343450:intergenic 45.0%
! CTTTTATGCTACAGCGGTGA+AGG + tig0006422:19849-19868 Msa1343450:intergenic 45.0%
AACATTTGACTCACGAGCCT+TGG - tig0006422:19940-19959 Msa1343450:intron 45.0%
TCTTGCAAAAGCTCTTGCCA+AGG + tig0006422:19960-19979 Msa1343450:intergenic 45.0%
AGCACACAGGGAAGGAATAA+AGG - tig0006422:20308-20327 Msa1343450:intron 45.0%
!! AAGAGCCTGATGATGGTTAC+AGG + tig0006422:20505-20524 Msa1343450:intergenic 45.0%
GCTAAGTGTTCAACCAAGTG+AGG - tig0006422:20660-20679 Msa1343450:intron 45.0%
!! TTCAACCAAGTGAGGTATCG+TGG - tig0006422:20668-20687 Msa1343450:intron 45.0%
!! TCAACCAAGTGAGGTATCGT+GGG - tig0006422:20669-20688 Msa1343450:intron 45.0%
GTATTCACAAGACTGCTGGA+AGG - tig0006422:20740-20759 Msa1343450:intron 45.0%
ACTGCTGGAAGGATTCATTG+CGG - tig0006422:20751-20770 Msa1343450:intron 45.0%
AGTGAGGATCTGTTCATCGA+TGG + tig0006422:20791-20810 Msa1343450:intergenic 45.0%
ATCGATGAACAGATCCTCAC+TGG - tig0006422:20790-20809 Msa1343450:intron 45.0%
ATCAGCAAGGGAGATGACAT+GGG - tig0006422:20863-20882 Msa1343450:intron 45.0%
! TCTGTGAGTTGAAGAGATGC+AGG - tig0006422:21023-21042 Msa1343450:intron 45.0%
! CTGTGAGTTGAAGAGATGCA+GGG - tig0006422:21024-21043 Msa1343450:intron 45.0%
TTGGTGAAGGTAGGAATCCA+TGG - tig0006422:21190-21209 Msa1343450:intron 45.0%
TATTCTGCCTCAACGGTTTG+TGG - tig0006422:21287-21306 Msa1343450:CDS 45.0%
TGCCTGAAAGAAGGCGAAAT+TGG + tig0006422:21648-21667 Msa1343450:intergenic 45.0%
TTCGGCCAAATCCATAGTAG+AGG + tig0006422:21685-21704 Msa1343450:intergenic 45.0%
! TGGCTGGGTTGAAAAAGGTT+CGG + tig0006422:21703-21722 Msa1343450:intergenic 45.0%
! TACACTGGCTGGGTTGAAAA+AGG + tig0006422:21708-21727 Msa1343450:intergenic 45.0%
! AGGTAAAGCTTACACTGGCT+GGG + tig0006422:21718-21737 Msa1343450:intergenic 45.0%
AAGGTAAAGCTTACACTGGC+TGG + tig0006422:21719-21738 Msa1343450:intergenic 45.0%
GTGCAAGGTAAAGCTTACAC+TGG + tig0006422:21723-21742 Msa1343450:intergenic 45.0%
ACCACTTCTATCATCTGGAG+TGG + tig0006422:21927-21946 Msa1343450:intergenic 45.0%
! TAGAAGTGGTGTTTTGCAGC+AGG - tig0006422:21937-21956 Msa1343450:intron 45.0%
GGAGGGATGTTTGTGTTTAG+AGG - tig0006422:22061-22080 Msa1343450:CDS 45.0%
!! GATATTTTCAGTGGCGGGAG+AGG + tig0006422:18515-18534 Msa0441610:intergenic 50.0%
! CCACGGATATTTTCAGTGGC+GGG + tig0006422:18520-18539 Msa0441610:intergenic 50.0%
! GCCACGGATATTTTCAGTGG+CGG + tig0006422:18521-18540 Msa1343450:intergenic 50.0%
TAGCTGTGAAGAGAGAGCCA+CGG + tig0006422:18537-18556 Msa1343450:intergenic 50.0%
! GAATTCGGGGGTGTGATAGA+TGG + tig0006422:18661-18680 Msa1343450:intergenic 50.0%
GGGTAAGTGTGTGAATTCGG+GGG + tig0006422:18673-18692 Msa1343450:intergenic 50.0%
GGGGTAAGTGTGTGAATTCG+GGG + tig0006422:18674-18693 Msa1343450:intergenic 50.0%
GGTGTAGTGAATGGTAGAGG+AGG + tig0006422:18695-18714 Msa1343450:intergenic 50.0%
TGGGGTGTAGTGAATGGTAG+AGG + tig0006422:18698-18717 Msa1343450:intergenic 50.0%
CTTACAGGGAATAGCTGTGG+TGG - tig0006422:19356-19375 Msa1343450:intron 50.0%
AAGCTAATTGCAGTGGGCGT+TGG - tig0006422:19565-19584 Msa1343450:intron 50.0%
! CAACTTTGGCTCATCAGCTG+TGG + tig0006422:19986-20005 Msa1343450:intergenic 50.0%
AGCAGCCTGTAACCATCATC+AGG - tig0006422:20497-20516 Msa1343450:intron 50.0%
TGAACCCACGATACCTCACT+TGG + tig0006422:20676-20695 Msa1343450:intergenic 50.0%
!! AAGTGAGGTATCGTGGGTTC+AGG - tig0006422:20675-20694 Msa1343450:intron 50.0%
GTATCGTGGGTTCAGGAAGT+GGG - tig0006422:20682-20701 Msa1343450:intron 50.0%
TATCGTGGGTTCAGGAAGTG+GGG - tig0006422:20683-20702 Msa1343450:intron 50.0%
CTGCTGGAAGGATTCATTGC+GGG - tig0006422:20752-20771 Msa1343450:intron 50.0%
AGCGTGATCCTCATCAGCAA+GGG - tig0006422:20851-20870 Msa1343450:intron 50.0%
TGTCATCTCCCTTGCTGATG+AGG + tig0006422:20862-20881 Msa1343450:intergenic 50.0%
CATCAGCAAGGGAGATGACA+TGG - tig0006422:20862-20881 Msa1343450:intron 50.0%
! TGACAGATCCATATGGTGGG+TGG - tig0006422:20948-20967 Msa1343450:intron 50.0%
AGGAAGGGTTTGCCTTTGTG+AGG - tig0006422:20980-20999 Msa1343450:intron 50.0%
GGAAGGGTTTGCCTTTGTGA+GGG - tig0006422:20981-21000 Msa1343450:intron 50.0%
GAGTTGAAGAGATGCAGGGT+AGG - tig0006422:21028-21047 Msa1343450:intron 50.0%
TTATGCAGACCCTGACCGTA+AGG - tig0006422:21558-21577 Msa1343450:intron 50.0%
CGTGCATTACCTTACGGTCA+GGG + tig0006422:21570-21589 Msa1343450:intergenic 50.0%
CCTGACCGTAAGGTAATGCA+CGG - tig0006422:21568-21587 Msa1343450:intron 50.0%
GCCACTCCAGATGATAGAAG+TGG - tig0006422:21923-21942 Msa1343450:intron 50.0%
CCCGCCACTGAAAATATCCG+TGG - tig0006422:18517-18536 Msa1343450:three_prime_UTR 55.0%
ACAGGCTGCTGAAGCTGACA+AGG + tig0006422:20487-20506 Msa1343450:intergenic 55.0%
GGTATCGTGGGTTCAGGAAG+TGG - tig0006422:20681-20700 Msa1343450:intron 55.0%
GGTTCAGGAAGTGGGGATGT+AGG - tig0006422:20690-20709 Msa1343450:intron 55.0%
CAGGAAGTGGGGATGTAGGT+TGG - tig0006422:20694-20713 Msa1343450:intron 55.0%
! AGTGGGGATGTAGGTTGGAC+AGG - tig0006422:20699-20718 Msa1343450:intron 55.0%
! GTGGGGATGTAGGTTGGACA+GGG - tig0006422:20700-20719 Msa1343450:intron 55.0%
GGTTGGACAGGGAAAGACTG+TGG - tig0006422:20711-20730 Msa1343450:intron 55.0%
CAGCGTGATCCTCATCAGCA+AGG - tig0006422:20850-20869 Msa1343450:intron 55.0%
GACACACTCCACCCACCATA+TGG + tig0006422:20959-20978 Msa1343450:intergenic 55.0%
AGGGTTTGCCTTTGTGAGGG+AGG - tig0006422:20984-21003 Msa1343450:intron 55.0%
GTTTGCCTTTGTGAGGGAGG+TGG - tig0006422:20987-21006 Msa1343450:intron 55.0%
TTTGGCCACCTCCCTCACAA+AGG + tig0006422:20995-21014 Msa1343450:intergenic 55.0%
TTGTGAGGGAGGTGGCCAAA+AGG - tig0006422:20995-21014 Msa1343450:intron 55.0%
CCGTGCATTACCTTACGGTC+AGG + tig0006422:21571-21590 Msa1343450:intergenic 55.0%
! GCAAGGAAAGACGAAGGCAC+AGG - tig0006422:22100-22119 Msa1343450:CDS 55.0%
GGCACTTTGGATGCCCATGC+TGG - tig0006422:19388-19407 Msa1343450:intron 60.0%
!! ATGGTGGGTGGAGTGTGTCG+AGG - tig0006422:20960-20979 Msa1343450:intron 60.0%
TGGGTGGAGTGTGTCGAGGA+AGG - tig0006422:20964-20983 Msa1343450:intron 60.0%
GGGTGGAGTGTGTCGAGGAA+GGG - tig0006422:20965-20984 Msa1343450:intron 60.0%
Chromosome Type Strat End Strand Name
tig0006422 gene 18484 22417 18484 ID=Msa1343450;Name=Msa1343450
tig0006422 mRNA 18484 22417 18484 ID=Msa1343450-mRNA-1;Parent=Msa1343450;Name=Msa1343450-mRNA-1;_AED=0.28;_eAED=0.28;_QI=135|0.62|0.66|0.77|1|1|9|237|343
tig0006422 exon 18484 18840 18484 ID=Msa1343450-mRNA-1:exon:4158;Parent=Msa1343450-mRNA-1
tig0006422 exon 18943 19038 18943 ID=Msa1343450-mRNA-1:exon:4157;Parent=Msa1343450-mRNA-1
tig0006422 exon 19177 19236 19177 ID=Msa1343450-mRNA-1:exon:4156;Parent=Msa1343450-mRNA-1
tig0006422 exon 19322 19366 19322 ID=Msa1343450-mRNA-1:exon:4155;Parent=Msa1343450-mRNA-1
tig0006422 exon 19501 19564 19501 ID=Msa1343450-mRNA-1:exon:4154;Parent=Msa1343450-mRNA-1
tig0006422 exon 20067 20204 20067 ID=Msa1343450-mRNA-1:exon:4153;Parent=Msa1343450-mRNA-1
tig0006422 exon 21206 21394 21206 ID=Msa1343450-mRNA-1:exon:4152;Parent=Msa1343450-mRNA-1
tig0006422 exon 21492 21538 21492 ID=Msa1343450-mRNA-1:exon:4151;Parent=Msa1343450-mRNA-1
tig0006422 exon 22010 22417 22010 ID=Msa1343450-mRNA-1:exon:4150;Parent=Msa1343450-mRNA-1
tig0006422 five_prime_UTR 22283 22417 22283 ID=Msa1343450-mRNA-1:five_prime_utr;Parent=Msa1343450-mRNA-1
tig0006422 CDS 22010 22282 22010 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 CDS 21492 21538 21492 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 CDS 21206 21394 21206 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 CDS 20067 20204 20067 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 CDS 19501 19564 19501 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 CDS 19322 19366 19322 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 CDS 19177 19236 19177 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 CDS 18943 19038 18943 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 CDS 18721 18840 18721 ID=Msa1343450-mRNA-1:cds;Parent=Msa1343450-mRNA-1
tig0006422 three_prime_UTR 18484 18720 18484 ID=Msa1343450-mRNA-1:three_prime_utr;Parent=Msa1343450-mRNA-1
Gene Sequence

>Msa1343450

ATGGCAACAACTCTACAATCTCTTCGATTTCCTTTTCATCCATCTATCACACCCCCGAATTCACACACTTACCCCTCCTCTACCATTCACTACACCCCAAAATCTAATACCTTCAAATCTTCATTCATCGGCACCCGAAACAAACGACTTCTTTCTGCTAGAGCTTCGACTTCACAGTATAGTCCCACTATTGCAGAGAATCTAGGCGATGTTAGTATTTTCACTGCTGCTGGGGAATCTGTCATGTTCAAAGATCTTTGGGATCAGGAACAGGGAATAGCTGTGGTGGCACTTTTAAGGCACTTTGGATGCCCATGCTGTTGGGAACTGGCTTCAACATTGAAAGAATCCAAATCAAGGTTTGATGCAGCTGGTGTCAAGCTAATTGCAGTGGGCGTTGGTGCCCCCAATAAAGCTCGTATTCTTGCTGAACGAGTAATGTTTCCTTGTCCTCCTTTGTCATTTCAGTGTTTGACTGTTTCCCTAGGGAATTATGAGGCTTTAAAAGAGAAGTGGGGATGTAGGTTGGACAGGGAAAGACTGTGGAAAATTGTATTCACAAGACTGCTGGAAGGATTCATTGCGGGTGAGATCAGTGTGCCATCGATGAACAGATCCTCACTGGCAAAGAAAGAAGAATGTGGCTGGGTCACTATCTGTGTTGCAAATTTGCCAAGGATAGCAGTATGGATGATCATTTTAATGGATATGTTACCATTTCCAATGGATTGTCTTTATGCAGACCCTGACCGTAAGGCATACAATTTTTTTGACCTCTACTATGGATTTGGCCGAACCTTTTTCAACCCAGCCAGTGCAAAGGTGTTATCGAGATTTGATGCTTTGCAAAAAGCGGTCAAGAACTATACAATAGAAGCCACTCCAGATGATAGAAGTGGTGTTTTGCAGCAGGGAGGGATGTTTGTGTTTAGAGGGAAAGAGCTATTATATGCAAGGAAAGACGAAGGCACAGGTGATCATGCCCCCTTAGACGATGTTTTTGATGTTTGCTGCAAAGTGCCTGTTGCTTAA

Protein sequence

>Msa1343450

MATTLQSLRFPFHPSITPPNSHTYPSSTIHYTPKSNTFKSSFIGTRNKRLLSARASTSQYSPTIAENLGDVSIFTAAGESVMFKDLWDQEQGIAVVALLRHFGCPCCWELASTLKESKSRFDAAGVKLIAVGVGAPNKARILAERVMFPCPPLSFQCLTVSLGNYEALKEKWGCRLDRERLWKIVFTRLLEGFIAGEISVPSMNRSSLAKKEECGWVTICVANLPRIAVWMIILMDMLPFPMDCLYADPDRKAYNFFDLYYGFGRTFFNPASAKVLSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGKELLYARKDEGTGDHAPLDDVFDVCCKVPVA*