AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1244900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244900 MtrunA17_Chr8g0359731 100.000 476 0 0 1 476 1 476 0.0 964
Msa1244900 MtrunA17_Chr8g0372551 99.580 476 2 0 1 476 1 476 0.0 962
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244900 AT2G34250.2 93.697 476 29 1 1 476 1 475 0.0 910
Msa1244900 AT2G34250.3 93.697 476 29 1 1 476 1 475 0.0 910
Msa1244900 AT2G34250.1 93.697 476 29 1 1 476 1 475 0.0 910
Msa1244900 AT1G29310.1 93.487 476 30 1 1 476 1 475 0.0 910
Msa1244900 AT1G29310.2 93.487 476 30 1 1 476 1 475 0.0 910
Msa1244900 AT1G78720.2 90.947 475 42 1 1 475 1 474 0.0 889
Msa1244900 AT1G78720.1 90.947 475 42 1 1 475 1 474 0.0 889
Msa1244900 AT1G78720.3 90.526 475 42 2 1 475 1 472 0.0 879

Find 175 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTTCCTTACTGTGTTAA+AGG 0.148284 8_2:-34384860 None:intergenic
CGGGCATTCTTTGACCTTAC+AGG 0.191772 8_2:-34383469 None:intergenic
ATTGAGAGAGATGAGAATTT+TGG 0.224987 8_2:-34381782 None:intergenic
GATGCAGTGAAAACATTATA+TGG 0.228906 8_2:+34383230 Msa1244900:intron
AGCTCCCCGACCACTGTTAA+TGG 0.255574 8_2:-34383272 None:intergenic
TTATCCCGCACCCACAGTTT+TGG 0.266212 8_2:+34384814 Msa1244900:three_prime_UTR
GTAAGATGGGAGGTGGGTTT+AGG 0.266404 8_2:+34382453 Msa1244900:exon
TACTTCCTCACTTTAGAAAA+AGG 0.274495 8_2:-34384903 None:intergenic
GCCAGCGAGCTTGGTTTCTT+TGG 0.285931 8_2:+34384745 Msa1244900:CDS
AAGACATACTTGGATATTCT+TGG 0.286253 8_2:+34385113 Msa1244900:three_prime_UTR
TTCATGGGTGCAATTGGTTC+CGG 0.294173 8_2:+34384658 Msa1244900:CDS
TATATGACCTTCTCTCTAAA+TGG 0.301758 8_2:-34382542 None:intergenic
ATTCCCACTGCTGCTGCATT+TGG 0.313275 8_2:+34384598 Msa1244900:CDS
CTTGGAAGTATATCACAATT+AGG 0.332365 8_2:-34383429 None:intergenic
TAATAATAATTACCAGATAT+TGG 0.334766 8_2:-34383122 None:intergenic
TGTTCATTGCCACCAATATC+TGG 0.336213 8_2:+34383110 Msa1244900:CDS
GGATATTCTTGGGTCGCTCT+TGG 0.341204 8_2:+34385124 Msa1244900:three_prime_UTR
TAAGATGGGAGGTGGGTTTA+GGG 0.344334 8_2:+34382454 Msa1244900:exon
GACAGTATTGGCAGATTTCA+TGG 0.346559 8_2:+34384642 Msa1244900:CDS
TGGTCTTGTAATGCAGCTTT+TGG 0.346972 8_2:+34382724 Msa1244900:CDS
TCACTGTTGGTGACGCAATC+GGG 0.358234 8_2:+34384789 Msa1244900:three_prime_UTR
GTTCTAGATAGATCTCCTTT+TGG 0.359503 8_2:+34385150 Msa1244900:three_prime_UTR
AACTTCATTGTTAATCTGTT+GGG 0.362152 8_2:+34383704 Msa1244900:CDS
TCATCATTGAACAAAATGTT+TGG 0.362793 8_2:-34385218 None:intergenic
GAGGTGTAAAACAGTTTGAT+TGG 0.363102 8_2:-34383511 None:intergenic
TCATGGGTGCAATTGGTTCC+GGG 0.364241 8_2:+34384659 Msa1244900:CDS
AAAGGCTATGGTTTGGGATC+TGG 0.365013 8_2:+34383079 Msa1244900:CDS
AAGGGCAGACTGAAGAATAA+TGG 0.365554 8_2:-34383542 None:intergenic
TTAGATGAGCTCCTTCAAAA+AGG 0.368354 8_2:+34383061 Msa1244900:CDS
CCCACTGCTGCTGCATTTGG+AGG 0.371658 8_2:+34384601 Msa1244900:CDS
GCATTTGGAGGCATGTGTAT+TGG 0.393611 8_2:+34384613 Msa1244900:CDS
TTCAAACCGTGGAACTGTTA+TGG 0.394615 8_2:+34382673 Msa1244900:CDS
GCAGATTTCATGGGTGCAAT+TGG 0.395146 8_2:+34384652 Msa1244900:CDS
CAGATAAAGTTCGTGCCCTT+AGG 0.403021 8_2:+34383344 Msa1244900:CDS
CCGACCACTGTTAATGGTTG+TGG 0.403048 8_2:-34383266 None:intergenic
CAGGTTAAATTACTGTAATC+TGG 0.403495 8_2:+34382431 Msa1244900:intron
TTAGGGTACTTCACTTAGTA+AGG 0.406793 8_2:+34382471 Msa1244900:CDS
GGTGCAATTGGTTCCGGGAC+TGG 0.407593 8_2:+34384664 Msa1244900:CDS
CAACTTGCAGGAACAACAAA+TGG 0.409211 8_2:+34384525 Msa1244900:intron
ACTCGAGTTAACATAGATCT+TGG 0.422271 8_2:-34385185 None:intergenic
TTGTTAATCTGTTGGGCAAA+TGG 0.423970 8_2:+34383711 Msa1244900:CDS
AAAACTTGGATTGAAGTCTC+TGG 0.424950 8_2:+34384043 Msa1244900:CDS
TATTTCTTTGAAGACATACT+TGG 0.425902 8_2:+34385103 Msa1244900:three_prime_UTR
AATGGTAATGCCTGGTCATC+GGG 0.426397 8_2:+34384543 Msa1244900:CDS
GATATTCTTGGGTCGCTCTT+GGG 0.426713 8_2:+34385125 Msa1244900:three_prime_UTR
ATTACTGTAATCTGGTAAGA+TGG 0.427462 8_2:+34382439 Msa1244900:exon
TGTAGTCAGCTTCCTCTGTA+TGG 0.427984 8_2:+34382596 Msa1244900:CDS
ATCACTGTTGGTGACGCAAT+CGG 0.428465 8_2:+34384788 Msa1244900:three_prime_UTR
AAAGAATGCCCGTGGACAGC+AGG 0.432758 8_2:+34383480 Msa1244900:CDS
CTGTTCTAGTTATCAACAAA+TGG 0.432890 8_2:-34383324 None:intergenic
TTTACAACGATATGCTACTT+TGG 0.435426 8_2:-34384926 None:intergenic
AAGGAAAGAGCCAGCGAGCT+TGG 0.436512 8_2:+34384736 Msa1244900:CDS
CTGGGAAATGAAGTAGAGAT+TGG 0.437679 8_2:-34383569 None:intergenic
AGACATACTTGGATATTCTT+GGG 0.439051 8_2:+34385114 Msa1244900:three_prime_UTR
ACCCTTTCTTCTATTTGAAT+CGG 0.439300 8_2:+34381721 Msa1244900:five_prime_UTR
AGGGCAGACTGAAGAATAAT+GGG 0.440665 8_2:-34383541 None:intergenic
TGAAATCTGCCAATACTGTC+AGG 0.442633 8_2:-34384639 None:intergenic
AACATTTCAAATTGATGACT+TGG 0.444964 8_2:+34385261 Msa1244900:three_prime_UTR
GCTAGCAGATTTGTGACATT+GGG 0.446952 8_2:-34383391 None:intergenic
AAACTTCATTGTTAATCTGT+TGG 0.448191 8_2:+34383703 Msa1244900:CDS
CGTGGAACTGTTATGGAGCT+TGG 0.452315 8_2:+34382680 Msa1244900:CDS
TGGTCGGGGAGCTGAGTTTG+AGG 0.453280 8_2:+34383282 Msa1244900:CDS
AGATAAAGTTCGTGCCCTTA+GGG 0.454587 8_2:+34383345 Msa1244900:CDS
GCTGTTGCCTATGTTCTGTC+TGG 0.456478 8_2:+34382950 Msa1244900:CDS
CAGGTGCAGATCCATTCTAT+TGG 0.462335 8_2:+34382633 Msa1244900:CDS
CACAACCATTAACAGTGGTC+GGG 0.464038 8_2:+34383267 Msa1244900:CDS
TTCCGATTCAAATAGAAGAA+AGG 0.468653 8_2:-34381723 None:intergenic
TATGTTCTGTCTGGAATGTA+TGG 0.469652 8_2:+34382959 Msa1244900:CDS
AAATGGAAGGAATCTGAATA+TGG 0.470788 8_2:+34383728 Msa1244900:CDS
CTCGGCATCTTGATAGCTGT+TGG 0.474492 8_2:+34382923 Msa1244900:CDS
GCAAAACCACGCGGAAACCT+TGG 0.474505 8_2:-34383447 None:intergenic
AATAGCAACCATTCATCAAA+AGG 0.476603 8_2:-34385318 None:intergenic
CGACCACTGTTAATGGTTGT+GGG 0.480413 8_2:-34383265 None:intergenic
TAGTATGCAATGCCACCAAC+AGG 0.483522 8_2:-34383767 None:intergenic
CAGCAGCAGTGGGAATATAT+CGG 0.486111 8_2:-34384591 None:intergenic
TCAGGAAGGAATGATAGAAA+TGG 0.489436 8_2:-34382494 None:intergenic
AGATGTTGCCAAGCAGTTGA+AGG 0.492024 8_2:+34384078 Msa1244900:CDS
CACTGTTGGTGACGCAATCG+GGG 0.494320 8_2:+34384790 Msa1244900:three_prime_UTR
ACAAGACCAGAAGTGACAAT+GGG 0.497571 8_2:-34382710 None:intergenic
TCCGATTCAAATAGAAGAAA+GGG 0.502378 8_2:-34381722 None:intergenic
AAATTTGATTCCCGATGACC+AGG 0.504394 8_2:-34384553 None:intergenic
TATGGAATACACTCAACAAC+AGG 0.504696 8_2:+34382614 Msa1244900:CDS
TATGGTAGTGTAGGCCAGCT+TGG 0.505753 8_2:+34382977 Msa1244900:CDS
AAATGGTAATGCCTGGTCAT+CGG 0.505999 8_2:+34384542 Msa1244900:CDS
GGTCGGGGAGCTGAGTTTGA+GGG 0.506235 8_2:+34383283 Msa1244900:CDS
GCCGGTAAAATGCTTCCCTA+AGG 0.507430 8_2:-34383360 None:intergenic
TACCCCAAAACTGTGGGTGC+GGG 0.508439 8_2:-34384818 None:intergenic
TAATCTGGTAAGATGGGAGG+TGG 0.509180 8_2:+34382446 Msa1244900:exon
ATAACACGCATCCAATAGAA+TGG 0.515174 8_2:-34382644 None:intergenic
CTGAAGAATAATGGGCATGT+TGG 0.515561 8_2:-34383533 None:intergenic
TGATGAATATTTCTTTGAAG+AGG 0.518607 8_2:+34385075 Msa1244900:three_prime_UTR
AGCTAGCAGATTTGTGACAT+TGG 0.520122 8_2:-34383392 None:intergenic
TGGCATTTCCCACTCCAAGC+TGG 0.520195 8_2:-34382991 None:intergenic
ACCAAAGAAACCAAGCTCGC+TGG 0.523159 8_2:-34384746 None:intergenic
GCCTCCAAATGCAGCAGCAG+TGG 0.524049 8_2:-34384602 None:intergenic
ATACCCCAAAACTGTGGGTG+CGG 0.525765 8_2:-34384819 None:intergenic
CTCGAGTTAACATAGATCTT+GGG 0.528565 8_2:-34385184 None:intergenic
TTACTGTAATCTGGTAAGAT+GGG 0.528830 8_2:+34382440 Msa1244900:exon
GGGTATTGAGGAATGGAAGT+AGG 0.531311 8_2:+34384836 Msa1244900:three_prime_UTR
CAATCTCTACTTCATTTCCC+AGG 0.533946 8_2:+34383570 Msa1244900:CDS
TAATCTGTTGGGCAAATGGA+AGG 0.535953 8_2:+34383715 Msa1244900:CDS
TAAACATATGACAATGATAC+CGG 0.537182 8_2:-34383041 None:intergenic
TGCAAGTAATATTCCAGTCC+CGG 0.537744 8_2:-34384677 None:intergenic
CTAATTGTGATATACTTCCA+AGG 0.539046 8_2:+34383430 Msa1244900:CDS
TGGTTCCGGTGGGTAAGAAG+TGG 0.540597 8_2:-34381762 None:intergenic
GGTCACTCTATTCCTGTTGG+TGG 0.542254 8_2:+34383755 Msa1244900:CDS
CAGTTCCACGGTTTGAAGCA+AGG 0.542857 8_2:-34382667 None:intergenic
TGAAGTAGAGATTGGAAACA+AGG 0.543347 8_2:-34383561 None:intergenic
CTGAAGTTCAGACCGCGGAC+AGG 0.547046 8_2:+34382513 Msa1244900:CDS
CTCTGCTCAGTCATCACTGT+TGG 0.547239 8_2:+34384776 Msa1244900:three_prime_UTR
CCAGCTTTAGCTTCTCTCAC+CGG 0.551682 8_2:+34385288 Msa1244900:three_prime_UTR
TAAAAGTACGCTTTACTCGT+TGG 0.551798 8_2:-34385006 None:intergenic
ACAGTATTGGCAGATTTCAT+GGG 0.552268 8_2:+34384643 Msa1244900:CDS
GAACAATGCATGGAAAGGAT+TGG 0.553602 8_2:-34383981 None:intergenic
CCACAACCATTAACAGTGGT+CGG 0.553676 8_2:+34383266 Msa1244900:CDS
ACTATATAACTGCACCCTCT+AGG 0.554045 8_2:+34383786 Msa1244900:CDS
CAGATCCACTTCTTACCCAC+CGG 0.554182 8_2:+34381757 Msa1244900:five_prime_UTR
GGTGGTCACTCTATTCCTGT+TGG 0.554775 8_2:+34383752 Msa1244900:CDS
GAACAACAAATGGTAATGCC+TGG 0.556580 8_2:+34384535 Msa1244900:CDS
GTACTTTGAGACATTTGAGA+AGG 0.557787 8_2:+34384717 Msa1244900:CDS
AATCTGTACCTTCAACTGCT+TGG 0.557872 8_2:-34384086 None:intergenic
AGTGTAGGCCAGCTTGGAGT+GGG 0.558950 8_2:+34382983 Msa1244900:CDS
AAGAATAATGGGCATGTTGG+AGG 0.559009 8_2:-34383530 None:intergenic
TTCATCAAAAGGAACTGCTC+CGG 0.559035 8_2:-34385307 None:intergenic
GTAGGTCCTTTAACACAGTA+AGG 0.560861 8_2:+34384854 Msa1244900:three_prime_UTR
GATATGAACCCTGCTGTCCA+CGG 0.564388 8_2:-34383489 None:intergenic
TGGGCCAAGAGCTACCCAAA+AGG 0.568096 8_2:-34385165 None:intergenic
AAAGAAATATTCATCATACA+TGG 0.568310 8_2:-34385068 None:intergenic
CCGGTAAAATGCTTCCCTAA+GGG 0.569426 8_2:-34383359 None:intergenic
ATATGAACCCTGCTGTCCAC+GGG 0.572002 8_2:-34383488 None:intergenic
AAAATTCTCTATTACCTAGA+GGG 0.576749 8_2:-34383800 None:intergenic
TATTGGTGCCCTGACAGTAT+TGG 0.578050 8_2:+34384630 Msa1244900:CDS
CCGGTGAGAGAAGCTAAAGC+TGG 0.579187 8_2:-34385288 None:intergenic
AACGGTGCACAGAAGCTACT+CGG 0.579576 8_2:+34382905 Msa1244900:CDS
TGACATTGGGAAGATTCTGC+CGG 0.580213 8_2:-34383378 None:intergenic
GTTATCCTTGCTTCAAACCG+TGG 0.587811 8_2:+34382662 Msa1244900:CDS
ACACAAGGTAGAACAATGCA+TGG 0.589874 8_2:-34383991 None:intergenic
TCCTCAATACCCCAAAACTG+TGG 0.591641 8_2:-34384825 None:intergenic
ACAAGAGAGCACGATCCTCA+CGG 0.592417 8_2:-34382781 None:intergenic
AAAAGAGCTGGAGGATGATG+AGG 0.594915 8_2:-34383015 None:intergenic
AGGTAGAACAATGCATGGAA+AGG 0.595832 8_2:-34383986 None:intergenic
TACAAGACCAGAAGTGACAA+TGG 0.598549 8_2:-34382711 None:intergenic
CAAGCTCCATAACAGTTCCA+CGG 0.599214 8_2:-34382679 None:intergenic
CCTCCAAATGCAGCAGCAGT+GGG 0.602091 8_2:-34384601 None:intergenic
TCAAATAGAAGAAAGGGTGG+AGG 0.604907 8_2:-34381716 None:intergenic
TAATAATTACCAGATATTGG+TGG 0.605322 8_2:-34383119 None:intergenic
GAAAGTGCCATTTAGAGAGA+AGG 0.605927 8_2:+34382535 Msa1244900:CDS
TAGTGTAGGCCAGCTTGGAG+TGG 0.606241 8_2:+34382982 Msa1244900:CDS
CCTCAATACCCCAAAACTGT+GGG 0.615255 8_2:-34384824 None:intergenic
AAGGAATCTGAATATGGAGG+TGG 0.616063 8_2:+34383734 Msa1244900:CDS
ACAACCATTAACAGTGGTCG+GGG 0.617144 8_2:+34383268 Msa1244900:CDS
ATACATTCCAGACAGAACAT+AGG 0.621128 8_2:-34382957 None:intergenic
TCTGGAATGTATGGTAGTGT+AGG 0.621876 8_2:+34382968 Msa1244900:CDS
AAATGGCACTTTCCTGTCCG+CGG 0.628213 8_2:-34382525 None:intergenic
GAAATCTGCCAATACTGTCA+GGG 0.633038 8_2:-34384638 None:intergenic
CTGTAATCTGGTAAGATGGG+AGG 0.638392 8_2:+34382443 Msa1244900:exon
AAGAATGCCCGTGGACAGCA+GGG 0.641052 8_2:+34383481 Msa1244900:CDS
GATTCAAATAGAAGAAAGGG+TGG 0.647342 8_2:-34381719 None:intergenic
GAAGTAGAGATTGGAAACAA+GGG 0.653350 8_2:-34383560 None:intergenic
GAGCTGGAGGATGATGAGGA+TGG 0.654773 8_2:-34383011 None:intergenic
CATCTTGATAGCTGTTGGAG+AGG 0.657186 8_2:+34382928 Msa1244900:CDS
GTTGAGTGTATTCCATACAG+AGG 0.661533 8_2:-34382608 None:intergenic
GTAAGGTCAAAGAATGCCCG+TGG 0.666399 8_2:+34383472 Msa1244900:CDS
TGGAAGGAATCTGAATATGG+AGG 0.673442 8_2:+34383731 Msa1244900:CDS
AATCTGGTAAGATGGGAGGT+GGG 0.678738 8_2:+34382447 Msa1244900:exon
ACTGTTGGTGACGCAATCGG+GGG 0.679445 8_2:+34384791 Msa1244900:three_prime_UTR
CCTTCCTGAAGTTCAGACCG+CGG 0.684240 8_2:+34382508 Msa1244900:CDS
AGTCGACAACAACGTCCGTG+AGG 0.688876 8_2:+34382766 Msa1244900:CDS
ACCTTACAGGCAAAACCACG+CGG 0.696789 8_2:-34383456 None:intergenic
AGTCCCACAACCATTAACAG+TGG 0.707722 8_2:+34383262 Msa1244900:CDS
ATGCTGACAACATAAACACA+AGG 0.717976 8_2:-34384006 None:intergenic
CTGCTACACAGAAAATACAG+TGG 0.721400 8_2:+34383680 Msa1244900:CDS
CAAGACCAGAAGTGACAATG+GGG 0.741804 8_2:-34382709 None:intergenic
ATACTTCCAAGGTTTCCGCG+TGG 0.759575 8_2:+34383441 Msa1244900:CDS
AAGACCAGAAGTGACAATGG+GGG 0.759683 8_2:-34382708 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAAATAATTCAATATTT+TGG - chr8_2:34382122-34382141 None:intergenic 10.0%
!! TGAATTATTTGATTAATATA+TGG + chr8_2:34382128-34382147 Msa1244900:intron 10.0%
!!! TTTAATGATATTTATTGTTT+TGG + chr8_2:34383905-34383924 Msa1244900:intron 10.0%
!! TAATAATAATTACCAGATAT+TGG - chr8_2:34383125-34383144 None:intergenic 15.0%
!! CTGGTAATTATTATTATTTA+TGG + chr8_2:34383129-34383148 Msa1244900:intron 15.0%
!! GTATAATCATATTGTTAAAA+CGG - chr8_2:34383647-34383666 None:intergenic 15.0%
!!! TTTTAACAATATGATTATAC+TGG + chr8_2:34383647-34383666 Msa1244900:intron 15.0%
!! AAGTATAAATAAAACAATTG+GGG - chr8_2:34384280-34384299 None:intergenic 15.0%
!! CAAGTATAAATAAAACAATT+GGG - chr8_2:34384281-34384300 None:intergenic 15.0%
!! ACAAGTATAAATAAAACAAT+TGG - chr8_2:34384282-34384301 None:intergenic 15.0%
!!! TCAATTGATTTTTCACAAAT+AGG + chr8_2:34381800-34381819 Msa1244900:five_prime_UTR 20.0%
!! ATAATACAAACAAATGAACT+AGG - chr8_2:34382084-34382103 None:intergenic 20.0%
!!! TATATTTTGGTGTAAATTTG+TGG + chr8_2:34382406-34382425 Msa1244900:intron 20.0%
!!! AAACAAAATTTTCCATCAAA+TGG - chr8_2:34382849-34382868 None:intergenic 20.0%
!!! TATACTTTTATCTAGTACTA+AGG + chr8_2:34384142-34384161 Msa1244900:intron 20.0%
!! CATATGTAAACTTCATAAAT+AGG - chr8_2:34384241-34384260 None:intergenic 20.0%
!!! GTATGAAATTTTTATCATGA+TGG + chr8_2:34384354-34384373 Msa1244900:intron 20.0%
!!! CACTTTTTTAAAACTGAAAT+TGG + chr8_2:34384428-34384447 Msa1244900:intron 20.0%
!! AAAGAAATATTCATCATACA+TGG - chr8_2:34385071-34385090 None:intergenic 20.0%
! TCAGATTTGTATCAATTCAT+CGG + chr8_2:34381855-34381874 Msa1244900:intron 25.0%
!! TTAACGTTGTATAATTTGTC+TGG + chr8_2:34381909-34381928 Msa1244900:intron 25.0%
!!! GTTTTGAATTCGTATATGTT+CGG + chr8_2:34381978-34381997 Msa1244900:intron 25.0%
!!! ATGTTTTGAATGCATTCATA+CGG + chr8_2:34382005-34382024 Msa1244900:intron 25.0%
! ATTTGCTTTGTAATGTAATG+CGG + chr8_2:34382200-34382219 Msa1244900:intron 25.0%
!! TGAATTTCAACATGATGTTT+TGG - chr8_2:34382341-34382360 None:intergenic 25.0%
! AAATATAACTAAGAACACCT+CGG - chr8_2:34382393-34382412 None:intergenic 25.0%
!! AGGTGTTCTTAGTTATATTT+TGG + chr8_2:34382393-34382412 Msa1244900:intron 25.0%
!!! TGATGGAAAATTTTGTTTGT+TGG + chr8_2:34382851-34382870 Msa1244900:intron 25.0%
! TAAACATATGACAATGATAC+CGG - chr8_2:34383044-34383063 None:intergenic 25.0%
! TAATAATTACCAGATATTGG+TGG - chr8_2:34383122-34383141 None:intergenic 25.0%
! TATTATGTTATGTTGCTGAT+TGG + chr8_2:34383604-34383623 Msa1244900:intron 25.0%
! AAACTTCATTGTTAATCTGT+TGG + chr8_2:34383703-34383722 Msa1244900:CDS 25.0%
! AACTTCATTGTTAATCTGTT+GGG + chr8_2:34383704-34383723 Msa1244900:CDS 25.0%
! AAAATTCTCTATTACCTAGA+GGG - chr8_2:34383803-34383822 None:intergenic 25.0%
!! TAGAGAATTTTCTATTCAGT+TGG + chr8_2:34383812-34383831 Msa1244900:intron 25.0%
! GGCAAAGAATATAATCTAAT+AGG - chr8_2:34383858-34383877 None:intergenic 25.0%
!! TTGAAGCTTTATATCAAACT+AGG - chr8_2:34383879-34383898 None:intergenic 25.0%
! CCTAAAAAATAATCAGCAAA+TGG - chr8_2:34384307-34384326 None:intergenic 25.0%
!!! CCATTTGCTGATTATTTTTT+AGG + chr8_2:34384304-34384323 Msa1244900:intron 25.0%
!! TGATGAATATTTCTTTGAAG+AGG + chr8_2:34385075-34385094 Msa1244900:three_prime_UTR 25.0%
!! TATTTCTTTGAAGACATACT+TGG + chr8_2:34385103-34385122 Msa1244900:three_prime_UTR 25.0%
! TCATCATTGAACAAAATGTT+TGG - chr8_2:34385221-34385240 None:intergenic 25.0%
!! AACATTTCAAATTGATGACT+TGG + chr8_2:34385261-34385280 Msa1244900:three_prime_UTR 25.0%
ACCCTTTCTTCTATTTGAAT+CGG + chr8_2:34381721-34381740 Msa1244900:five_prime_UTR 30.0%
TCCGATTCAAATAGAAGAAA+GGG - chr8_2:34381725-34381744 None:intergenic 30.0%
TTCCGATTCAAATAGAAGAA+AGG - chr8_2:34381726-34381745 None:intergenic 30.0%
! ATTGAGAGAGATGAGAATTT+TGG - chr8_2:34381785-34381804 None:intergenic 30.0%
CAGGTTAAATTACTGTAATC+TGG + chr8_2:34382431-34382450 Msa1244900:intron 30.0%
ATTACTGTAATCTGGTAAGA+TGG + chr8_2:34382439-34382458 Msa1244900:exon 30.0%
TTACTGTAATCTGGTAAGAT+GGG + chr8_2:34382440-34382459 Msa1244900:exon 30.0%
TATATGACCTTCTCTCTAAA+TGG - chr8_2:34382545-34382564 None:intergenic 30.0%
AAAAATGAAGAGAGAGATCA+CGG - chr8_2:34382570-34382589 None:intergenic 30.0%
! GTATTTCCTATTGAGTTTTG+TGG + chr8_2:34382821-34382840 Msa1244900:intron 30.0%
TAAGGAAGAATTCTCTCATT+TGG + chr8_2:34383208-34383227 Msa1244900:intron 30.0%
GATGCAGTGAAAACATTATA+TGG + chr8_2:34383230-34383249 Msa1244900:intron 30.0%
! CTGTTCTAGTTATCAACAAA+TGG - chr8_2:34383327-34383346 None:intergenic 30.0%
! CTTGGAAGTATATCACAATT+AGG - chr8_2:34383432-34383451 None:intergenic 30.0%
CTAATTGTGATATACTTCCA+AGG + chr8_2:34383430-34383449 Msa1244900:CDS 30.0%
ATAATACAACTCTACTACCT+GGG - chr8_2:34383590-34383609 None:intergenic 30.0%
AAATGGAAGGAATCTGAATA+TGG + chr8_2:34383728-34383747 Msa1244900:CDS 30.0%
GAAAATTCTCTATTACCTAG+AGG - chr8_2:34383804-34383823 None:intergenic 30.0%
!! AATCCAAGTTTTTGAGAACA+AGG - chr8_2:34384035-34384054 None:intergenic 30.0%
!!! TATAACGAGCATTTTTTCCT+CGG + chr8_2:34384167-34384186 Msa1244900:intron 30.0%
! AAAAGTGAATAGCCTTAAGA+CGG - chr8_2:34384415-34384434 None:intergenic 30.0%
!! ACAATCATTTTTCAACTTGC+AGG + chr8_2:34384513-34384532 Msa1244900:intron 30.0%
!!! AATCACCTTTTTCTAAAGTG+AGG + chr8_2:34384898-34384917 Msa1244900:three_prime_UTR 30.0%
! TACTTCCTCACTTTAGAAAA+AGG - chr8_2:34384906-34384925 None:intergenic 30.0%
! TTTACAACGATATGCTACTT+TGG - chr8_2:34384929-34384948 None:intergenic 30.0%
AAGACATACTTGGATATTCT+TGG + chr8_2:34385113-34385132 Msa1244900:three_prime_UTR 30.0%
AGACATACTTGGATATTCTT+GGG + chr8_2:34385114-34385133 Msa1244900:three_prime_UTR 30.0%
! TTCTAGATAGATCTCCTTTT+GGG + chr8_2:34385151-34385170 Msa1244900:three_prime_UTR 30.0%
AATAGCAACCATTCATCAAA+AGG - chr8_2:34385321-34385340 None:intergenic 30.0%
GATTCAAATAGAAGAAAGGG+TGG - chr8_2:34381722-34381741 None:intergenic 35.0%
!!! AGAGATGAGAATTTTGGTTC+CGG - chr8_2:34381779-34381798 None:intergenic 35.0%
CATTATGTCTGCATGTTTCT+TGG + chr8_2:34382293-34382312 Msa1244900:intron 35.0%
!! TTGATTTGATTTTGATGCCG+AGG + chr8_2:34382373-34382392 Msa1244900:intron 35.0%
! TTAGGGTACTTCACTTAGTA+AGG + chr8_2:34382471-34382490 Msa1244900:CDS 35.0%
TCAGGAAGGAATGATAGAAA+TGG - chr8_2:34382497-34382516 None:intergenic 35.0%
TATGGAATACACTCAACAAC+AGG + chr8_2:34382614-34382633 Msa1244900:CDS 35.0%
ATAACACGCATCCAATAGAA+TGG - chr8_2:34382647-34382666 None:intergenic 35.0%
TTACTCTTTGCTCCTAGAAA+CGG + chr8_2:34382887-34382906 Msa1244900:intron 35.0%
ATACATTCCAGACAGAACAT+AGG - chr8_2:34382960-34382979 None:intergenic 35.0%
! TATGTTCTGTCTGGAATGTA+TGG + chr8_2:34382959-34382978 Msa1244900:CDS 35.0%
TTAGATGAGCTCCTTCAAAA+AGG + chr8_2:34383061-34383080 Msa1244900:CDS 35.0%
CTTCAAAAAGGCTATGGTTT+GGG + chr8_2:34383073-34383092 Msa1244900:CDS 35.0%
GAGGTGTAAAACAGTTTGAT+TGG - chr8_2:34383514-34383533 None:intergenic 35.0%
GAAGTAGAGATTGGAAACAA+GGG - chr8_2:34383563-34383582 None:intergenic 35.0%
TGAAGTAGAGATTGGAAACA+AGG - chr8_2:34383564-34383583 None:intergenic 35.0%
CATAATACAACTCTACTACC+TGG - chr8_2:34383591-34383610 None:intergenic 35.0%
TTGTTAATCTGTTGGGCAAA+TGG + chr8_2:34383711-34383730 Msa1244900:CDS 35.0%
! GTTTTACAGCTTAGCTGATA+TGG + chr8_2:34383955-34383974 Msa1244900:intron 35.0%
ATGCTGACAACATAAACACA+AGG - chr8_2:34384009-34384028 None:intergenic 35.0%
AAAACTTGGATTGAAGTCTC+TGG + chr8_2:34384043-34384062 Msa1244900:CDS 35.0%
AAAACCAATCAGTTCACTCA+TGG - chr8_2:34384469-34384488 None:intergenic 35.0%
!! ACAGTATTGGCAGATTTCAT+GGG + chr8_2:34384643-34384662 Msa1244900:CDS 35.0%
!! GTACTTTGAGACATTTGAGA+AGG + chr8_2:34384717-34384736 Msa1244900:CDS 35.0%
GTTCTTCCTTACTGTGTTAA+AGG - chr8_2:34384863-34384882 None:intergenic 35.0%
! TAAAAGTACGCTTTACTCGT+TGG - chr8_2:34385009-34385028 None:intergenic 35.0%
!! GTTCTAGATAGATCTCCTTT+TGG + chr8_2:34385150-34385169 Msa1244900:three_prime_UTR 35.0%
CTCGAGTTAACATAGATCTT+GGG - chr8_2:34385187-34385206 None:intergenic 35.0%
ACTCGAGTTAACATAGATCT+TGG - chr8_2:34385188-34385207 None:intergenic 35.0%
TCAAATAGAAGAAAGGGTGG+AGG - chr8_2:34381719-34381738 None:intergenic 40.0%
!!! ATGAGAATTTTGGTTCCGGT+GGG - chr8_2:34381775-34381794 None:intergenic 40.0%
GTGAGCAAATTGTTGATCTG+TGG + chr8_2:34381943-34381962 Msa1244900:intron 40.0%
TTGATCTGTGGCGTGTAATT+AGG + chr8_2:34381955-34381974 Msa1244900:intron 40.0%
TGATCTGTGGCGTGTAATTA+GGG + chr8_2:34381956-34381975 Msa1244900:intron 40.0%
TTGGTGTAAATTTGTGGTGC+AGG + chr8_2:34382412-34382431 Msa1244900:intron 40.0%
!! GAAAGTGCCATTTAGAGAGA+AGG + chr8_2:34382535-34382554 Msa1244900:CDS 40.0%
GTTGAGTGTATTCCATACAG+AGG - chr8_2:34382611-34382630 None:intergenic 40.0%
TTCAAACCGTGGAACTGTTA+TGG + chr8_2:34382673-34382692 Msa1244900:CDS 40.0%
ACAAGACCAGAAGTGACAAT+GGG - chr8_2:34382713-34382732 None:intergenic 40.0%
TACAAGACCAGAAGTGACAA+TGG - chr8_2:34382714-34382733 None:intergenic 40.0%
!!! TGGTCTTGTAATGCAGCTTT+TGG + chr8_2:34382724-34382743 Msa1244900:CDS 40.0%
ATGGCACCACAAAACTCAAT+AGG - chr8_2:34382830-34382849 None:intergenic 40.0%
!!! AGTTTTGTGGTGCCATTTGA+TGG + chr8_2:34382834-34382853 Msa1244900:intron 40.0%
! TCTGGAATGTATGGTAGTGT+AGG + chr8_2:34382968-34382987 Msa1244900:CDS 40.0%
! CCAAACCATAGCCTTTTTGA+AGG - chr8_2:34383075-34383094 None:intergenic 40.0%
CCTTCAAAAAGGCTATGGTT+TGG + chr8_2:34383072-34383091 Msa1244900:CDS 40.0%
TGTTCATTGCCACCAATATC+TGG + chr8_2:34383110-34383129 Msa1244900:CDS 40.0%
AGATAAAGTTCGTGCCCTTA+GGG + chr8_2:34383345-34383364 Msa1244900:CDS 40.0%
GCTAGCAGATTTGTGACATT+GGG - chr8_2:34383394-34383413 None:intergenic 40.0%
AGCTAGCAGATTTGTGACAT+TGG - chr8_2:34383395-34383414 None:intergenic 40.0%
!! AAGAATAATGGGCATGTTGG+AGG - chr8_2:34383533-34383552 None:intergenic 40.0%
!! CTGAAGAATAATGGGCATGT+TGG - chr8_2:34383536-34383555 None:intergenic 40.0%
AGGGCAGACTGAAGAATAAT+GGG - chr8_2:34383544-34383563 None:intergenic 40.0%
AAGGGCAGACTGAAGAATAA+TGG - chr8_2:34383545-34383564 None:intergenic 40.0%
CTGGGAAATGAAGTAGAGAT+TGG - chr8_2:34383572-34383591 None:intergenic 40.0%
CAATCTCTACTTCATTTCCC+AGG + chr8_2:34383570-34383589 Msa1244900:CDS 40.0%
CTGCTACACAGAAAATACAG+TGG + chr8_2:34383680-34383699 Msa1244900:CDS 40.0%
TAATCTGTTGGGCAAATGGA+AGG + chr8_2:34383715-34383734 Msa1244900:CDS 40.0%
TGGAAGGAATCTGAATATGG+AGG + chr8_2:34383731-34383750 Msa1244900:CDS 40.0%
AAGGAATCTGAATATGGAGG+TGG + chr8_2:34383734-34383753 Msa1244900:CDS 40.0%
ACTATATAACTGCACCCTCT+AGG + chr8_2:34383786-34383805 Msa1244900:CDS 40.0%
GAACAATGCATGGAAAGGAT+TGG - chr8_2:34383984-34384003 None:intergenic 40.0%
AGGTAGAACAATGCATGGAA+AGG - chr8_2:34383989-34384008 None:intergenic 40.0%
ACACAAGGTAGAACAATGCA+TGG - chr8_2:34383994-34384013 None:intergenic 40.0%
! GTGCCTTGTTCTCAAAAACT+TGG + chr8_2:34384029-34384048 Msa1244900:CDS 40.0%
AATCTGTACCTTCAACTGCT+TGG - chr8_2:34384089-34384108 None:intergenic 40.0%
TTAGTTATGAACATGTGCCG+AGG - chr8_2:34384187-34384206 None:intergenic 40.0%
ACTTCATAAATAGGTCACGC+TGG - chr8_2:34384232-34384251 None:intergenic 40.0%
!! TGCAGTTGATAACCGTCTTA+AGG + chr8_2:34384400-34384419 Msa1244900:intron 40.0%
AAGTCCATGAGTGAACTGAT+TGG + chr8_2:34384462-34384481 Msa1244900:intron 40.0%
CAACTTGCAGGAACAACAAA+TGG + chr8_2:34384525-34384544 Msa1244900:intron 40.0%
! GAACAACAAATGGTAATGCC+TGG + chr8_2:34384535-34384554 Msa1244900:CDS 40.0%
! AAATGGTAATGCCTGGTCAT+CGG + chr8_2:34384542-34384561 Msa1244900:CDS 40.0%
AAATTTGATTCCCGATGACC+AGG - chr8_2:34384556-34384575 None:intergenic 40.0%
GAAATCTGCCAATACTGTCA+GGG - chr8_2:34384641-34384660 None:intergenic 40.0%
TGAAATCTGCCAATACTGTC+AGG - chr8_2:34384642-34384661 None:intergenic 40.0%
!! GACAGTATTGGCAGATTTCA+TGG + chr8_2:34384642-34384661 Msa1244900:CDS 40.0%
TGCAAGTAATATTCCAGTCC+CGG - chr8_2:34384680-34384699 None:intergenic 40.0%
!!! AGTTTTGGGGTATTGAGGAA+TGG + chr8_2:34384829-34384848 Msa1244900:three_prime_UTR 40.0%
GTAGGTCCTTTAACACAGTA+AGG + chr8_2:34384854-34384873 Msa1244900:three_prime_UTR 40.0%
TTCATCAAAAGGAACTGCTC+CGG - chr8_2:34385310-34385329 None:intergenic 40.0%
! GAGCAGTTCCTTTTGATGAA+TGG + chr8_2:34385310-34385329 Msa1244900:three_prime_UTR 40.0%
!!! GATGAGAATTTTGGTTCCGG+TGG - chr8_2:34381776-34381795 None:intergenic 45.0%
TGCATTCATACGGATCTAGC+TGG + chr8_2:34382015-34382034 Msa1244900:intron 45.0%
!! GAGCATCGAAACAAACACAC+AGG - chr8_2:34382268-34382287 None:intergenic 45.0%
CTGTAATCTGGTAAGATGGG+AGG + chr8_2:34382443-34382462 Msa1244900:exon 45.0%
TAATCTGGTAAGATGGGAGG+TGG + chr8_2:34382446-34382465 Msa1244900:exon 45.0%
AATCTGGTAAGATGGGAGGT+GGG + chr8_2:34382447-34382466 Msa1244900:exon 45.0%
! TAAGATGGGAGGTGGGTTTA+GGG + chr8_2:34382454-34382473 Msa1244900:exon 45.0%
TGTAGTCAGCTTCCTCTGTA+TGG + chr8_2:34382596-34382615 Msa1244900:CDS 45.0%
CAGGTGCAGATCCATTCTAT+TGG + chr8_2:34382633-34382652 Msa1244900:CDS 45.0%
GTTATCCTTGCTTCAAACCG+TGG + chr8_2:34382662-34382681 Msa1244900:CDS 45.0%
CAAGCTCCATAACAGTTCCA+CGG - chr8_2:34382682-34382701 None:intergenic 45.0%
AAGACCAGAAGTGACAATGG+GGG - chr8_2:34382711-34382730 None:intergenic 45.0%
CAAGACCAGAAGTGACAATG+GGG - chr8_2:34382712-34382731 None:intergenic 45.0%
! CTTGTAATGCAGCTTTTGGC+TGG + chr8_2:34382728-34382747 Msa1244900:CDS 45.0%
! CATCTTGATAGCTGTTGGAG+AGG + chr8_2:34382928-34382947 Msa1244900:CDS 45.0%
AAAAGAGCTGGAGGATGATG+AGG - chr8_2:34383018-34383037 None:intergenic 45.0%
!!! ATCCTCCAGCTCTTTTTTGC+CGG + chr8_2:34383022-34383041 Msa1244900:CDS 45.0%
TGATACCGGCAAAAAAGAGC+TGG - chr8_2:34383030-34383049 None:intergenic 45.0%
GAGCTCCTTCAAAAAGGCTA+TGG + chr8_2:34383067-34383086 Msa1244900:CDS 45.0%
! AAAGGCTATGGTTTGGGATC+TGG + chr8_2:34383079-34383098 Msa1244900:CDS 45.0%
AGTCCCACAACCATTAACAG+TGG + chr8_2:34383262-34383281 Msa1244900:CDS 45.0%
CGACCACTGTTAATGGTTGT+GGG - chr8_2:34383268-34383287 None:intergenic 45.0%
CCACAACCATTAACAGTGGT+CGG + chr8_2:34383266-34383285 Msa1244900:CDS 45.0%
CACAACCATTAACAGTGGTC+GGG + chr8_2:34383267-34383286 Msa1244900:CDS 45.0%
ACAACCATTAACAGTGGTCG+GGG + chr8_2:34383268-34383287 Msa1244900:CDS 45.0%
CAGATAAAGTTCGTGCCCTT+AGG + chr8_2:34383344-34383363 Msa1244900:CDS 45.0%
CCGGTAAAATGCTTCCCTAA+GGG - chr8_2:34383362-34383381 None:intergenic 45.0%
!!! CCCTTAGGGAAGCATTTTAC+CGG + chr8_2:34383359-34383378 Msa1244900:CDS 45.0%
TGACATTGGGAAGATTCTGC+CGG - chr8_2:34383381-34383400 None:intergenic 45.0%
TAGTATGCAATGCCACCAAC+AGG - chr8_2:34383770-34383789 None:intergenic 45.0%
AGATGTTGCCAAGCAGTTGA+AGG + chr8_2:34384078-34384097 Msa1244900:CDS 45.0%
! AATGGTAATGCCTGGTCATC+GGG + chr8_2:34384543-34384562 Msa1244900:CDS 45.0%
CAGCAGCAGTGGGAATATAT+CGG - chr8_2:34384594-34384613 None:intergenic 45.0%
! GCATTTGGAGGCATGTGTAT+TGG + chr8_2:34384613-34384632 Msa1244900:CDS 45.0%
! TATTGGTGCCCTGACAGTAT+TGG + chr8_2:34384630-34384649 Msa1244900:CDS 45.0%
GCAGATTTCATGGGTGCAAT+TGG + chr8_2:34384652-34384671 Msa1244900:CDS 45.0%
! TTCATGGGTGCAATTGGTTC+CGG + chr8_2:34384658-34384677 Msa1244900:CDS 45.0%
!! ATCACTGTTGGTGACGCAAT+CGG + chr8_2:34384788-34384807 Msa1244900:three_prime_UTR 45.0%
CCTCAATACCCCAAAACTGT+GGG - chr8_2:34384827-34384846 None:intergenic 45.0%
TCCTCAATACCCCAAAACTG+TGG - chr8_2:34384828-34384847 None:intergenic 45.0%
!! GGGTATTGAGGAATGGAAGT+AGG + chr8_2:34384836-34384855 Msa1244900:three_prime_UTR 45.0%
GATATTCTTGGGTCGCTCTT+GGG + chr8_2:34385125-34385144 Msa1244900:three_prime_UTR 45.0%
!! ATCTCCTTTTGGGTAGCTCT+TGG + chr8_2:34385161-34385180 Msa1244900:three_prime_UTR 45.0%
!!! TAGATTTTTTTTATATAAAA+AGG - chr8_2:34383190-34383209 None:intergenic 5.0%
!!! TTTTATATAAAAAAAATCTA+AGG + chr8_2:34383190-34383209 Msa1244900:intron 5.0%
CAGATCCACTTCTTACCCAC+CGG + chr8_2:34381757-34381776 Msa1244900:five_prime_UTR 50.0%
ATACGGATCTAGCTGGATCG+AGG + chr8_2:34382022-34382041 Msa1244900:intron 50.0%
! GTAAGATGGGAGGTGGGTTT+AGG + chr8_2:34382453-34382472 Msa1244900:exon 50.0%
AAATGGCACTTTCCTGTCCG+CGG - chr8_2:34382528-34382547 None:intergenic 50.0%
! CAGTTCCACGGTTTGAAGCA+AGG - chr8_2:34382670-34382689 None:intergenic 50.0%
CGTGGAACTGTTATGGAGCT+TGG + chr8_2:34382680-34382699 Msa1244900:CDS 50.0%
! ATCACCCCCATTGTCACTTC+TGG + chr8_2:34382704-34382723 Msa1244900:CDS 50.0%
! ACAAGAGAGCACGATCCTCA+CGG - chr8_2:34382784-34382803 None:intergenic 50.0%
AGCTTCTGTGCACCGTTTCT+AGG - chr8_2:34382902-34382921 None:intergenic 50.0%
AACGGTGCACAGAAGCTACT+CGG + chr8_2:34382905-34382924 Msa1244900:CDS 50.0%
! CTCGGCATCTTGATAGCTGT+TGG + chr8_2:34382923-34382942 Msa1244900:CDS 50.0%
GCTGTTGCCTATGTTCTGTC+TGG + chr8_2:34382950-34382969 Msa1244900:CDS 50.0%
! TATGGTAGTGTAGGCCAGCT+TGG + chr8_2:34382977-34382996 Msa1244900:CDS 50.0%
TACCGGCAAAAAAGAGCTGG+AGG - chr8_2:34383027-34383046 None:intergenic 50.0%
CCGACCACTGTTAATGGTTG+TGG - chr8_2:34383269-34383288 None:intergenic 50.0%
GCCGGTAAAATGCTTCCCTA+AGG - chr8_2:34383363-34383382 None:intergenic 50.0%
ATACTTCCAAGGTTTCCGCG+TGG + chr8_2:34383441-34383460 Msa1244900:CDS 50.0%
ACCTTACAGGCAAAACCACG+CGG - chr8_2:34383459-34383478 None:intergenic 50.0%
CGGGCATTCTTTGACCTTAC+AGG - chr8_2:34383472-34383491 None:intergenic 50.0%
GTAAGGTCAAAGAATGCCCG+TGG + chr8_2:34383472-34383491 Msa1244900:CDS 50.0%
ATATGAACCCTGCTGTCCAC+GGG - chr8_2:34383491-34383510 None:intergenic 50.0%
GATATGAACCCTGCTGTCCA+CGG - chr8_2:34383492-34383511 None:intergenic 50.0%
GGTGGTCACTCTATTCCTGT+TGG + chr8_2:34383752-34383771 Msa1244900:CDS 50.0%
GGTCACTCTATTCCTGTTGG+TGG + chr8_2:34383755-34383774 Msa1244900:CDS 50.0%
ATTCCCACTGCTGCTGCATT+TGG + chr8_2:34384598-34384617 Msa1244900:CDS 50.0%
! TCATGGGTGCAATTGGTTCC+GGG + chr8_2:34384659-34384678 Msa1244900:CDS 50.0%
ACCAAAGAAACCAAGCTCGC+TGG - chr8_2:34384749-34384768 None:intergenic 50.0%
CTCTGCTCAGTCATCACTGT+TGG + chr8_2:34384776-34384795 Msa1244900:three_prime_UTR 50.0%
!! TCACTGTTGGTGACGCAATC+GGG + chr8_2:34384789-34384808 Msa1244900:three_prime_UTR 50.0%
! TTATCCCGCACCCACAGTTT+TGG + chr8_2:34384814-34384833 Msa1244900:three_prime_UTR 50.0%
! TATCCCGCACCCACAGTTTT+GGG + chr8_2:34384815-34384834 Msa1244900:three_prime_UTR 50.0%
ATACCCCAAAACTGTGGGTG+CGG - chr8_2:34384822-34384841 None:intergenic 50.0%
!!! CCCACAGTTTTGGGGTATTG+AGG + chr8_2:34384824-34384843 Msa1244900:three_prime_UTR 50.0%
GGATATTCTTGGGTCGCTCT+TGG + chr8_2:34385124-34385143 Msa1244900:three_prime_UTR 50.0%
! CCAGCTTTAGCTTCTCTCAC+CGG + chr8_2:34385288-34385307 Msa1244900:three_prime_UTR 50.0%
TGGTTCCGGTGGGTAAGAAG+TGG - chr8_2:34381765-34381784 None:intergenic 55.0%
! GCTGGATCGAGGTGGATTCT+CGG + chr8_2:34382033-34382052 Msa1244900:intron 55.0%
CCTTCCTGAAGTTCAGACCG+CGG + chr8_2:34382508-34382527 Msa1244900:CDS 55.0%
AGTCGACAACAACGTCCGTG+AGG + chr8_2:34382766-34382785 Msa1244900:CDS 55.0%
TAGTGTAGGCCAGCTTGGAG+TGG + chr8_2:34382982-34383001 Msa1244900:CDS 55.0%
AGTGTAGGCCAGCTTGGAGT+GGG + chr8_2:34382983-34383002 Msa1244900:CDS 55.0%
TGGCATTTCCCACTCCAAGC+TGG - chr8_2:34382994-34383013 None:intergenic 55.0%
GAGCTGGAGGATGATGAGGA+TGG - chr8_2:34383014-34383033 None:intergenic 55.0%
AGCTCCCCGACCACTGTTAA+TGG - chr8_2:34383275-34383294 None:intergenic 55.0%
GCAAAACCACGCGGAAACCT+TGG - chr8_2:34383450-34383469 None:intergenic 55.0%
!! TCCGCGTGGTTTTGCCTGTA+AGG + chr8_2:34383455-34383474 Msa1244900:CDS 55.0%
AAAGAATGCCCGTGGACAGC+AGG + chr8_2:34383480-34383499 Msa1244900:CDS 55.0%
AAGAATGCCCGTGGACAGCA+GGG + chr8_2:34383481-34383500 Msa1244900:CDS 55.0%
CCTCCAAATGCAGCAGCAGT+GGG - chr8_2:34384604-34384623 None:intergenic 55.0%
AAGGAAAGAGCCAGCGAGCT+TGG + chr8_2:34384736-34384755 Msa1244900:CDS 55.0%
GCCAGCGAGCTTGGTTTCTT+TGG + chr8_2:34384745-34384764 Msa1244900:CDS 55.0%
!! CACTGTTGGTGACGCAATCG+GGG + chr8_2:34384790-34384809 Msa1244900:three_prime_UTR 55.0%
!! ACTGTTGGTGACGCAATCGG+GGG + chr8_2:34384791-34384810 Msa1244900:three_prime_UTR 55.0%
! ATCCCGCACCCACAGTTTTG+GGG + chr8_2:34384816-34384835 Msa1244900:three_prime_UTR 55.0%
TACCCCAAAACTGTGGGTGC+GGG - chr8_2:34384821-34384840 None:intergenic 55.0%
TGGGCCAAGAGCTACCCAAA+AGG - chr8_2:34385168-34385187 None:intergenic 55.0%
CCGGTGAGAGAAGCTAAAGC+TGG - chr8_2:34385291-34385310 None:intergenic 55.0%
CGGATCTAGCTGGATCGAGG+TGG + chr8_2:34382025-34382044 Msa1244900:intron 60.0%
CCGCGGTCTGAACTTCAGGA+AGG - chr8_2:34382511-34382530 None:intergenic 60.0%
CTGTCCGCGGTCTGAACTTC+AGG - chr8_2:34382515-34382534 None:intergenic 60.0%
CTGAAGTTCAGACCGCGGAC+AGG + chr8_2:34382513-34382532 Msa1244900:CDS 60.0%
TGGTCGGGGAGCTGAGTTTG+AGG + chr8_2:34383282-34383301 Msa1244900:CDS 60.0%
GGTCGGGGAGCTGAGTTTGA+GGG + chr8_2:34383283-34383302 Msa1244900:CDS 60.0%
CCCACTGCTGCTGCATTTGG+AGG + chr8_2:34384601-34384620 Msa1244900:CDS 60.0%
GCCTCCAAATGCAGCAGCAG+TGG - chr8_2:34384605-34384624 None:intergenic 60.0%
! GGTGCAATTGGTTCCGGGAC+TGG + chr8_2:34384664-34384683 Msa1244900:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 34381710 34385350 34381710 ID=Msa1244900;Name=Msa1244900
chr8_2 mRNA 34381710 34385350 34381710 ID=Msa1244900-mRNA-1;Parent=Msa1244900;Name=Msa1244900-mRNA-1;_AED=0.09;_eAED=0.09;_QI=136|1|1|1|0.83|0.71|7|576|476
chr8_2 exon 34381710 34381821 34381710 ID=Msa1244900-mRNA-1:exon:10902;Parent=Msa1244900-mRNA-1
chr8_2 exon 34382434 34382801 34382434 ID=Msa1244900-mRNA-1:exon:10903;Parent=Msa1244900-mRNA-1
chr8_2 exon 34382904 34383131 34382904 ID=Msa1244900-mRNA-1:exon:10904;Parent=Msa1244900-mRNA-1
chr8_2 exon 34383237 34383591 34383237 ID=Msa1244900-mRNA-1:exon:10905;Parent=Msa1244900-mRNA-1
chr8_2 exon 34383680 34383807 34383680 ID=Msa1244900-mRNA-1:exon:10906;Parent=Msa1244900-mRNA-1
chr8_2 exon 34383964 34384099 34383964 ID=Msa1244900-mRNA-1:exon:10907;Parent=Msa1244900-mRNA-1
chr8_2 exon 34384535 34385350 34384535 ID=Msa1244900-mRNA-1:exon:10908;Parent=Msa1244900-mRNA-1
chr8_2 five_prime_UTR 34381710 34381821 34381710 ID=Msa1244900-mRNA-1:five_prime_utr;Parent=Msa1244900-mRNA-1
chr8_2 five_prime_UTR 34382434 34382457 34382434 ID=Msa1244900-mRNA-1:five_prime_utr;Parent=Msa1244900-mRNA-1
chr8_2 CDS 34382458 34382801 34382458 ID=Msa1244900-mRNA-1:cds;Parent=Msa1244900-mRNA-1
chr8_2 CDS 34382904 34383131 34382904 ID=Msa1244900-mRNA-1:cds;Parent=Msa1244900-mRNA-1
chr8_2 CDS 34383237 34383591 34383237 ID=Msa1244900-mRNA-1:cds;Parent=Msa1244900-mRNA-1
chr8_2 CDS 34383680 34383807 34383680 ID=Msa1244900-mRNA-1:cds;Parent=Msa1244900-mRNA-1
chr8_2 CDS 34383964 34384099 34383964 ID=Msa1244900-mRNA-1:cds;Parent=Msa1244900-mRNA-1
chr8_2 CDS 34384535 34384774 34384535 ID=Msa1244900-mRNA-1:cds;Parent=Msa1244900-mRNA-1
chr8_2 three_prime_UTR 34384775 34385350 34384775 ID=Msa1244900-mRNA-1:three_prime_utr;Parent=Msa1244900-mRNA-1
Gene Sequence

>Msa1244900

ATGGGAGGTGGGTTTAGGGTACTTCACTTAGTAAGGCCATTTCTATCATTCCTTCCTGAAGTTCAGACCGCGGACAGGAAAGTGCCATTTAGAGAGAAGGTCATATATACCGTGATCTCTCTCTTCATTTTTCTTGTATGTAGTCAGCTTCCTCTGTATGGAATACACTCAACAACAGGTGCAGATCCATTCTATTGGATGCGTGTTATCCTTGCTTCAAACCGTGGAACTGTTATGGAGCTTGGAATCACCCCCATTGTCACTTCTGGTCTTGTAATGCAGCTTTTGGCTGGTTCTAAGATCATTGAAGTCGACAACAACGTCCGTGAGGATCGTGCTCTCTTAAACGGTGCACAGAAGCTACTCGGCATCTTGATAGCTGTTGGAGAGGCTGTTGCCTATGTTCTGTCTGGAATGTATGGTAGTGTAGGCCAGCTTGGAGTGGGAAATGCCATCCTCATCATCCTCCAGCTCTTTTTTGCCGGTATCATTGTCATATGTTTAGATGAGCTCCTTCAAAAAGGCTATGGTTTGGGATCTGGAATTTCTCTGTTCATTGCCACCAATATCTGTGAAAACATTATATGGAAAGCATTTAGTCCCACAACCATTAACAGTGGTCGGGGAGCTGAGTTTGAGGGTGCTGTTATTGCTCTATTCCATTTGTTGATAACTAGAACAGATAAAGTTCGTGCCCTTAGGGAAGCATTTTACCGGCAGAATCTTCCCAATGTCACAAATCTGCTAGCTACTGTCTTGATCTTCCTAATTGTGATATACTTCCAAGGTTTCCGCGTGGTTTTGCCTGTAAGGTCAAAGAATGCCCGTGGACAGCAGGGTTCATATCCAATCAAACTGTTTTACACCTCCAACATGCCCATTATTCTTCAGTCTGCCCTTGTTTCCAATCTCTACTTCATTTCCCAGCTGCTACACAGAAAATACAGTGGAAACTTCATTGTTAATCTGTTGGGCAAATGGAAGGAATCTGAATATGGAGGTGGTCACTCTATTCCTGTTGGTGGCATTGCATACTATATAACTGCACCCTCTAGCTTAGCTGATATGGCAGCCAATCCTTTCCATGCATTGTTCTACCTTGTGTTTATGTTGTCAGCATGTGCCTTGTTCTCAAAAACTTGGATTGAAGTCTCTGGTTCGTCTGCTAGAGATGTTGCCAAGCAGTTGAAGGAACAACAAATGGTAATGCCTGGTCATCGGGAATCAAATTTGCAAAAAGAGCTGAACCGATATATTCCCACTGCTGCTGCATTTGGAGGCATGTGTATTGGTGCCCTGACAGTATTGGCAGATTTCATGGGTGCAATTGGTTCCGGGACTGGAATATTACTTGCAGTAACAATCATCTATCAGTACTTTGAGACATTTGAGAAGGAAAGAGCCAGCGAGCTTGGTTTCTTTGGTTTCTAA
Protein sequence

>Msa1244900

MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF*