Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251230 | KEH20067.1 | 97.288 | 295 | 8 | 0 | 1 | 295 | 1 | 295 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251230 | sp|Q9LFD5|BPA1_ARATH | 65.106 | 235 | 74 | 5 | 18 | 252 | 4 | 230 | 2.14e-99 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251230 | A0A072TRN4 | 97.288 | 295 | 8 | 0 | 1 | 295 | 1 | 295 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030050 | Msa1251230 | 0.804634 | 1.966444e-49 | -8.615850e-47 |
| Msa0037180 | Msa1251230 | 0.841991 | 3.395745e-58 | -8.615850e-47 |
| Msa0074860 | Msa1251230 | -0.802182 | 6.333630e-49 | -8.615850e-47 |
| Msa0076640 | Msa1251230 | 0.812133 | 4.941480e-51 | -8.615850e-47 |
| Msa0092220 | Msa1251230 | 0.831934 | 1.259402e-55 | -8.615850e-47 |
| Msa0625900 | Msa1251230 | -0.804774 | 1.838071e-49 | -8.615850e-47 |
| Msa0638300 | Msa1251230 | -0.804278 | 2.332369e-49 | -8.615850e-47 |
| Msa0638820 | Msa1251230 | 0.807641 | 4.577698e-50 | -8.615850e-47 |
| Msa0663690 | Msa1251230 | -0.801426 | 9.053095e-49 | -8.615850e-47 |
| Msa0686810 | Msa1251230 | 0.804191 | 2.432099e-49 | -8.615850e-47 |
| Msa0697520 | Msa1251230 | 0.805170 | 1.519199e-49 | -8.615850e-47 |
| Msa0701800 | Msa1251230 | -0.804419 | 2.180022e-49 | -8.615850e-47 |
| Msa0702020 | Msa1251230 | -0.802516 | 5.406505e-49 | -8.615850e-47 |
| Msa0702690 | Msa1251230 | -0.815251 | 1.017297e-51 | -8.615850e-47 |
| Msa0721930 | Msa1251230 | 0.817186 | 3.757478e-52 | -8.615850e-47 |
| Msa0762930 | Msa1251230 | 0.818461 | 1.937141e-52 | -8.615850e-47 |
| Msa0826450 | Msa1251230 | 0.807808 | 4.217598e-50 | -8.615850e-47 |
| Msa0127910 | Msa1251230 | -0.819296 | 1.251488e-52 | -8.615850e-47 |
| Msa0167150 | Msa1251230 | -0.806726 | 7.151176e-50 | -8.615850e-47 |
| Msa0174060 | Msa1251230 | -0.809122 | 2.211934e-50 | -8.615850e-47 |
| Msa0177320 | Msa1251230 | 0.820972 | 5.170705e-53 | -8.615850e-47 |
| Msa0180100 | Msa1251230 | -0.810102 | 1.362242e-50 | -8.615850e-47 |
| Msa0186400 | Msa1251230 | -0.800467 | 1.421729e-48 | -8.615850e-47 |
| Msa0208040 | Msa1251230 | -0.804297 | 2.311242e-49 | -8.615850e-47 |
| Msa0209370 | Msa1251230 | -0.811780 | 5.900356e-51 | -8.615850e-47 |
| Msa0216150 | Msa1251230 | -0.802047 | 6.751018e-49 | -8.615850e-47 |
| Msa0224210 | Msa1251230 | 0.811344 | 7.336794e-51 | -8.615850e-47 |
| Msa0225070 | Msa1251230 | -0.843764 | 1.146162e-58 | -8.615850e-47 |
| Msa0229350 | Msa1251230 | -0.805506 | 1.292015e-49 | -8.615850e-47 |
| Msa0236690 | Msa1251230 | -0.809148 | 2.183262e-50 | -8.615850e-47 |
| Msa0236940 | Msa1251230 | 0.807600 | 4.669182e-50 | -8.615850e-47 |
| Msa1228600 | Msa1251230 | -0.818576 | 1.823440e-52 | -8.615850e-47 |
| Msa1251230 | Msa1256490 | -0.801173 | 1.020048e-48 | -8.615850e-47 |
| Msa1251230 | Msa1266120 | -0.808722 | 2.692774e-50 | -8.615850e-47 |
| Msa1251230 | Msa1279200 | -0.807692 | 4.464728e-50 | -8.615850e-47 |
| Msa1251230 | Msa1296810 | -0.803851 | 2.861874e-49 | -8.615850e-47 |
| Msa1251230 | Msa1297220 | -0.827274 | 1.712377e-54 | -8.615850e-47 |
| Msa1251230 | Msa1298480 | -0.807622 | 4.619084e-50 | -8.615850e-47 |
| Msa1251230 | Msa1315880 | -0.802909 | 4.485602e-49 | -8.615850e-47 |
| Msa1251230 | Msa1323260 | -0.819221 | 1.301220e-52 | -8.615850e-47 |
| Msa1251230 | Msa1327440 | 0.919504 | 4.143399e-87 | -8.615850e-47 |
| Msa1251230 | Msa1328680 | -0.801429 | 9.041268e-49 | -8.615850e-47 |
| Msa1251230 | Msa1342360 | -0.813314 | 2.725535e-51 | -8.615850e-47 |
| Msa1251230 | Msa1343450 | -0.808944 | 2.414320e-50 | -8.615850e-47 |
| Msa1251230 | Msa1350580 | -0.812668 | 3.775498e-51 | -8.615850e-47 |
| Msa1251230 | Msa1366480 | 0.800296 | 1.540506e-48 | -8.615850e-47 |
| Msa1251230 | Msa1373310 | -0.817797 | 2.737568e-52 | -8.615850e-47 |
| Msa1251230 | Msa1377980 | -0.835900 | 1.281587e-56 | -8.615850e-47 |
| Msa1251230 | Msa1382100 | -0.810258 | 1.260632e-50 | -8.615850e-47 |
| Msa1251230 | Msa1384410 | -0.825197 | 5.343802e-54 | -8.615850e-47 |
| Msa1251230 | Msa1408280 | -0.834642 | 2.663376e-56 | -8.615850e-47 |
| Msa1251230 | Msa1413150 | 0.806725 | 7.154471e-50 | -8.615850e-47 |
| Msa1251230 | Msa1420540 | 0.801412 | 9.117059e-49 | -8.615850e-47 |
| Msa1251230 | Msa1429470 | 0.809384 | 1.943253e-50 | -8.615850e-47 |
| Msa1251230 | Msa1459920 | 0.803322 | 3.684441e-49 | -8.615850e-47 |
| Msa1251230 | Msa1464470 | -0.809234 | 2.092609e-50 | -8.615850e-47 |
| Msa0368620 | Msa1251230 | 0.802273 | 6.067186e-49 | -8.615850e-47 |
| Msa0389710 | Msa1251230 | 0.806430 | 8.258053e-50 | -8.615850e-47 |
| Msa0390590 | Msa1251230 | -0.820236 | 7.629130e-53 | -8.615850e-47 |
| Msa0390790 | Msa1251230 | 0.806345 | 8.606456e-50 | -8.615850e-47 |
| Msa0403740 | Msa1251230 | -0.811434 | 7.016536e-51 | -8.615850e-47 |
| Msa0412580 | Msa1251230 | -0.816075 | 6.667113e-52 | -8.615850e-47 |
| Msa0416040 | Msa1251230 | 0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0450890 | Msa1251230 | -0.805790 | 1.125820e-49 | -8.615850e-47 |
| Msa0456450 | Msa1251230 | -0.814310 | 1.643939e-51 | -8.615850e-47 |
| Msa0457070 | Msa1251230 | -0.832797 | 7.701186e-56 | -8.615850e-47 |
| Msa0998660 | Msa1251230 | -0.805923 | 1.056030e-49 | -8.615850e-47 |
| Msa1039150 | Msa1251230 | -0.805455 | 1.323673e-49 | -8.615850e-47 |
| Msa1041250 | Msa1251230 | 0.801432 | 9.030279e-49 | -8.615850e-47 |
| Msa1055520 | Msa1251230 | -0.801496 | 8.760959e-49 | -8.615850e-47 |
| Msa1070630 | Msa1251230 | -0.814720 | 1.334524e-51 | -8.615850e-47 |
| Msa1078590 | Msa1251230 | -0.808183 | 3.509314e-50 | -8.615850e-47 |
| Msa1078760 | Msa1251230 | -0.808000 | 3.840391e-50 | -8.615850e-47 |
| Msa1088000 | Msa1251230 | -0.814826 | 1.263895e-51 | -8.615850e-47 |
| Msa1088400 | Msa1251230 | -0.809453 | 1.878209e-50 | -8.615850e-47 |
| Msa1093190 | Msa1251230 | -0.804647 | 1.954204e-49 | -8.615850e-47 |
| Msa1104020 | Msa1251230 | -0.800625 | 1.319836e-48 | -8.615850e-47 |
| Msa0254640 | Msa1251230 | 0.808782 | 2.614895e-50 | -8.615850e-47 |
| Msa0266140 | Msa1251230 | -0.817627 | 2.989772e-52 | -8.615850e-47 |
| Msa0267450 | Msa1251230 | -0.807797 | 4.241332e-50 | -8.615850e-47 |
| Msa0267510 | Msa1251230 | -0.807544 | 4.800338e-50 | -8.615850e-47 |
| Msa0269660 | Msa1251230 | -0.809226 | 2.100736e-50 | -8.615850e-47 |
| Msa0304060 | Msa1251230 | -0.813119 | 3.007197e-51 | -8.615850e-47 |
| Msa0364030 | Msa1251230 | -0.813788 | 2.143653e-51 | -8.615850e-47 |
| Msa1169590 | Msa1251230 | -0.801036 | 1.088160e-48 | -8.615850e-47 |
| Msa1190610 | Msa1251230 | 0.810586 | 1.070594e-50 | -8.615850e-47 |
| Msa1191530 | Msa1251230 | -0.805487 | 1.303784e-49 | -8.615850e-47 |
| Msa1192800 | Msa1251230 | 0.942971 | 2.785756e-102 | -8.615850e-47 |
| Msa1199540 | Msa1251230 | -0.808855 | 2.523050e-50 | -8.615850e-47 |
| Msa1204900 | Msa1251230 | -0.809225 | 2.102042e-50 | -8.615850e-47 |
| Msa1205270 | Msa1251230 | -0.827283 | 1.704069e-54 | -8.615850e-47 |
| Msa1209990 | Msa1251230 | -0.808880 | 2.492237e-50 | -8.615850e-47 |
| Msa0508160 | Msa1251230 | 0.811089 | 8.336464e-51 | -8.615850e-47 |
| Msa0538050 | Msa1251230 | -0.828700 | 7.770844e-55 | -8.615850e-47 |
| Msa0541470 | Msa1251230 | -0.805366 | 1.381981e-49 | -8.615850e-47 |
| Msa0558510 | Msa1251230 | 0.803900 | 2.795410e-49 | -8.615850e-47 |
| Msa0572730 | Msa1251230 | -0.843686 | 1.202652e-58 | -8.615850e-47 |
| Msa0582270 | Msa1251230 | -0.806369 | 8.504164e-50 | -8.615850e-47 |
| Msa0861400 | Msa1251230 | -0.819996 | 8.658609e-53 | -8.615850e-47 |
| Msa0931550 | Msa1251230 | -0.805472 | 1.313250e-49 | -8.615850e-47 |
| Msa0934290 | Msa1251230 | -0.811922 | 5.495269e-51 | -8.615850e-47 |
| Msa0947550 | Msa1251230 | -0.804250 | 2.363838e-49 | -8.615850e-47 |
| Msa0967900 | Msa1251230 | -0.839631 | 1.411619e-57 | -8.615850e-47 |
| Msa0971780 | Msa1251230 | -0.812633 | 3.842920e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251230 | MtrunA17_Chr8g0366351 | 96.774 | 279 | 9 | 0 | 17 | 295 | 1 | 279 | 0.0 | 539 |
| Msa1251230 | MtrunA17_Chr5g0410831 | 77.660 | 282 | 60 | 1 | 17 | 295 | 1 | 282 | 4.73e-149 | 419 |
| Msa1251230 | MtrunA17_Chr1g0161591 | 56.202 | 258 | 101 | 3 | 19 | 269 | 31 | 283 | 3.53e-95 | 283 |
| Msa1251230 | MtrunA17_Chr8g0392141 | 50.877 | 285 | 130 | 2 | 4 | 288 | 16 | 290 | 1.53e-93 | 279 |
| Msa1251230 | MtrunA17_Chr5g0410821 | 77.778 | 153 | 34 | 0 | 129 | 281 | 1 | 153 | 8.27e-76 | 228 |
| Msa1251230 | MtrunA17_Chr7g0253621 | 50.000 | 250 | 107 | 3 | 17 | 250 | 1 | 248 | 9.47e-75 | 229 |
| Msa1251230 | MtrunA17_Chr5g0416421 | 38.750 | 240 | 128 | 4 | 22 | 246 | 10 | 245 | 1.76e-46 | 156 |
| Msa1251230 | MtrunA17_Chr7g0217131 | 32.283 | 254 | 134 | 5 | 21 | 245 | 7 | 251 | 3.03e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251230 | AT4G17720.1 | 67.910 | 268 | 83 | 2 | 17 | 281 | 1 | 268 | 2.05e-122 | 353 |
| Msa1251230 | AT5G46870.2 | 61.429 | 280 | 99 | 3 | 17 | 287 | 1 | 280 | 5.31e-110 | 321 |
| Msa1251230 | AT5G46870.1 | 61.429 | 280 | 99 | 3 | 17 | 287 | 1 | 280 | 5.31e-110 | 321 |
| Msa1251230 | AT5G16840.2 | 65.106 | 235 | 75 | 4 | 18 | 252 | 4 | 231 | 4.72e-102 | 299 |
| Msa1251230 | AT5G16840.1 | 65.106 | 235 | 74 | 5 | 18 | 252 | 4 | 230 | 2.18e-100 | 295 |
| Msa1251230 | AT5G16840.3 | 64.407 | 236 | 76 | 5 | 17 | 252 | 1 | 228 | 8.69e-100 | 293 |
| Msa1251230 | AT1G67950.3 | 52.766 | 235 | 101 | 2 | 19 | 253 | 28 | 252 | 1.30e-79 | 243 |
| Msa1251230 | AT1G67950.2 | 52.766 | 235 | 100 | 3 | 19 | 253 | 29 | 252 | 4.84e-78 | 239 |
| Msa1251230 | AT1G67950.1 | 52.766 | 235 | 100 | 3 | 19 | 253 | 28 | 251 | 5.58e-78 | 239 |
| Msa1251230 | AT5G32450.1 | 50.407 | 246 | 107 | 2 | 20 | 250 | 5 | 250 | 2.34e-74 | 229 |
| Msa1251230 | AT1G67950.4 | 49.754 | 203 | 91 | 3 | 51 | 253 | 1 | 192 | 1.01e-59 | 190 |
| Msa1251230 | AT1G14340.1 | 36.441 | 236 | 135 | 3 | 22 | 246 | 9 | 240 | 1.40e-40 | 141 |
| Msa1251230 | AT3G01210.2 | 32.520 | 246 | 132 | 5 | 23 | 244 | 9 | 244 | 1.46e-29 | 113 |
| Msa1251230 | AT3G01210.1 | 32.520 | 246 | 132 | 5 | 23 | 244 | 9 | 244 | 1.46e-29 | 113 |
Find 90 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGTTGCTGCGGCTTT+TGG | 0.121118 | 8_2:-47022725 | None:intergenic |
| CTTGCGAAGGGATTTATCTT+AGG | 0.222166 | 8_2:+47022293 | Msa1251230:CDS |
| AGAAGTGGATCAGAAGTTTC+AGG | 0.297615 | 8_2:+47022463 | Msa1251230:CDS |
| AAGCGTAACGGCGTCGAAAC+TGG | 0.306350 | 8_2:-47017611 | None:intergenic |
| CAAACTTCCACCTGCTGCTT+TGG | 0.312762 | 8_2:+47021912 | Msa1251230:CDS |
| AATTGCCTTTGTTACTTTCA+AGG | 0.314569 | 8_2:+47019094 | Msa1251230:CDS |
| AGCAGCTGCAAATGCTGATT+TGG | 0.315915 | 8_2:-47022498 | None:intergenic |
| AAGCATATCATTTCCAACTT+TGG | 0.355824 | 8_2:-47022931 | None:intergenic |
| GTGGAAAATGAAGGATTATC+AGG | 0.361604 | 8_2:+47023051 | Msa1251230:three_prime_UTR |
| ACTGGTACTACCTGGGTAAC+TGG | 0.368921 | 8_2:+47022575 | Msa1251230:CDS |
| AATTTGCAGGAGTTTCAAAA+AGG | 0.375052 | 8_2:-47022811 | None:intergenic |
| AGAAACTGAATTTCCAAAGT+TGG | 0.404196 | 8_2:+47022918 | Msa1251230:three_prime_UTR |
| AAAAGTCGGTAATGTTTCCT+TGG | 0.410188 | 8_2:+47018873 | Msa1251230:CDS |
| AGTAAGGTTGCTAAGGCAGC+TGG | 0.411693 | 8_2:+47022605 | Msa1251230:CDS |
| AAAATGAAAAGAACTCCTTT+AGG | 0.412585 | 8_2:-47018912 | None:intergenic |
| TTGCGAAGGGATTTATCTTA+GGG | 0.414214 | 8_2:+47022294 | Msa1251230:CDS |
| CCGAGGCTGTTGAACTCAAC+TGG | 0.416921 | 8_2:-47022358 | None:intergenic |
| CTCACACTGAAACAATTTGC+AGG | 0.422823 | 8_2:-47022824 | None:intergenic |
| TTGAATATGTTGAAATGAAA+AGG | 0.433319 | 8_2:+47018944 | Msa1251230:CDS |
| TTCCAAGCCTACACCTGCTC+AGG | 0.433849 | 8_2:+47022757 | Msa1251230:CDS |
| GCAGGTGGAAGTTTGTAATC+TGG | 0.442443 | 8_2:-47021904 | None:intergenic |
| CCAGTATGCGCAGGTCCTTT+CGG | 0.448214 | 8_2:+47022697 | Msa1251230:CDS |
| GACTATCGTCGTGGTGGTGG+TGG | 0.450512 | 8_2:-47017479 | None:intergenic |
| TTTGACTTTGAAACGCGTAC+TGG | 0.459422 | 8_2:-47017523 | None:intergenic |
| AAAGTCGGTAATGTTTCCTT+GGG | 0.468203 | 8_2:+47018874 | Msa1251230:CDS |
| GTGGTGCTGACTCTGCTTTA+CGG | 0.473735 | 8_2:+47022243 | Msa1251230:CDS |
| GCTAAGGCAGCTGGGGATGT+AGG | 0.476446 | 8_2:+47022614 | Msa1251230:CDS |
| TACACAAGGGTGGAAAATGA+AGG | 0.479815 | 8_2:+47023042 | Msa1251230:three_prime_UTR |
| CCGAAAGGACCTGCGCATAC+TGG | 0.482179 | 8_2:-47022697 | None:intergenic |
| TTTGTCAGTTAACATAACTC+TGG | 0.492790 | 8_2:+47021879 | Msa1251230:CDS |
| CGATAGTAGTACTGCCGTCT+CGG | 0.498280 | 8_2:-47019129 | None:intergenic |
| ACCCTGAGCAGGTGTAGGCT+TGG | 0.499327 | 8_2:-47022759 | None:intergenic |
| ACAGATGATGCCAAAGCAGC+AGG | 0.499671 | 8_2:-47021922 | None:intergenic |
| ACAGAAAACAAAAGAGAAAG+TGG | 0.508009 | 8_2:+47022637 | Msa1251230:CDS |
| GCCGCTGAGGGTAAAACTCC+TGG | 0.513612 | 8_2:+47022221 | Msa1251230:CDS |
| CAAAGGATCAAACCCTGAGC+AGG | 0.517360 | 8_2:-47022770 | None:intergenic |
| GGGAGTGTATGATGCAGAGA+TGG | 0.521358 | 8_2:+47018789 | Msa1251230:exon |
| ATATACTCACTGGTACTACC+TGG | 0.533676 | 8_2:+47022567 | Msa1251230:CDS |
| GAACAGAAAGTCAGTACCGC+AGG | 0.537626 | 8_2:+47022521 | Msa1251230:CDS |
| TTCGACTATCGTCGTGGTGG+TGG | 0.541199 | 8_2:-47017482 | None:intergenic |
| TTTACGGAAGGCAGAGGATG+TGG | 0.541227 | 8_2:+47022259 | Msa1251230:CDS |
| AGCATCTGAACAAGACCTAA+AGG | 0.544372 | 8_2:+47018897 | Msa1251230:CDS |
| GAAAGTGGAAAATGCAGAAG+TGG | 0.544685 | 8_2:+47022652 | Msa1251230:CDS |
| GTAAGGTTGCTAAGGCAGCT+GGG | 0.546936 | 8_2:+47022606 | Msa1251230:CDS |
| GTCTTGTTCAGATGCTCCCA+AGG | 0.552262 | 8_2:-47018890 | None:intergenic |
| TTACGCTTCTTCTGATATGT+CGG | 0.553543 | 8_2:+47017626 | Msa1251230:five_prime_UTR |
| CTCTGCTTTACGGAAGGCAG+AGG | 0.563214 | 8_2:+47022253 | Msa1251230:CDS |
| TCCAAGCCTACACCTGCTCA+GGG | 0.564645 | 8_2:+47022758 | Msa1251230:CDS |
| CCAGTTGAGTTCAACAGCCT+CGG | 0.565333 | 8_2:+47022358 | Msa1251230:CDS |
| AAATCCCTTCGCAAGCATGC+TGG | 0.567408 | 8_2:-47022285 | None:intergenic |
| CAGGTCAAAACTATAAAAGT+CGG | 0.570204 | 8_2:+47018859 | Msa1251230:CDS |
| GATGCTGTGAACAAAGCAAA+GGG | 0.570764 | 8_2:+47022320 | Msa1251230:CDS |
| GAGTGGTAGAGTTAAAGAAG+TGG | 0.581041 | 8_2:+47022448 | Msa1251230:CDS |
| AAGAATCGCTATATACTCAC+TGG | 0.582491 | 8_2:+47022557 | Msa1251230:CDS |
| AAAGCAGAGTCAGCACCACC+AGG | 0.583320 | 8_2:-47022239 | None:intergenic |
| GGATCCACAAGGTGCCGAGA+CGG | 0.588318 | 8_2:+47019115 | Msa1251230:CDS |
| TGCTGACTCTGCTTTACGGA+AGG | 0.591242 | 8_2:+47022247 | Msa1251230:CDS |
| GTCACCAGCATGCTTGCGAA+GGG | 0.591713 | 8_2:+47022281 | Msa1251230:CDS |
| AGATGCTGTGAACAAAGCAA+AGG | 0.591752 | 8_2:+47022319 | Msa1251230:CDS |
| ACTGCCGTCTCGGCACCTTG+TGG | 0.593659 | 8_2:-47019119 | None:intergenic |
| GGAGTGTATGATGCAGAGAT+GGG | 0.598932 | 8_2:+47018790 | Msa1251230:exon |
| AGTTGAAGACCAGTATGCGC+AGG | 0.604810 | 8_2:+47022688 | Msa1251230:CDS |
| TGGATCCTTGAAAGTAACAA+AGG | 0.609650 | 8_2:-47019099 | None:intergenic |
| GCAGAGATGGGTTCTCCACA+AGG | 0.610522 | 8_2:+47018802 | Msa1251230:exon |
| AGTGTTAGATATCAGACCAC+GGG | 0.611841 | 8_2:+47018769 | Msa1251230:five_prime_UTR |
| ATGTACAAGAAGTAAATCAA+AGG | 0.612134 | 8_2:-47022787 | None:intergenic |
| CTTAGTGAGAAATTAACTGC+TGG | 0.614592 | 8_2:+47022413 | Msa1251230:CDS |
| AACTGGGGTGTGTGTTTGAG+AGG | 0.619779 | 8_2:-47017594 | None:intergenic |
| ACTAAAAGCACCAGTTACCC+AGG | 0.621013 | 8_2:-47022585 | None:intergenic |
| TATACTCACTGGTACTACCT+GGG | 0.629105 | 8_2:+47022568 | Msa1251230:CDS |
| GATGATGCCAAAGCAGCAGG+TGG | 0.631195 | 8_2:-47021919 | None:intergenic |
| TAAGGTTGCTAAGGCAGCTG+GGG | 0.631391 | 8_2:+47022607 | Msa1251230:CDS |
| CTCTGCATCATACACTCCCG+TGG | 0.634900 | 8_2:-47018785 | None:intergenic |
| GTGCAGTTCACTTGTTGCTG+CGG | 0.638692 | 8_2:-47022732 | None:intergenic |
| CGAGACGGCAGTACTACTAT+CGG | 0.643990 | 8_2:+47019130 | Msa1251230:CDS |
| ATCAAACCCTGAGCAGGTGT+AGG | 0.644936 | 8_2:-47022764 | None:intergenic |
| ACTGAACGTTTAGAACCTTG+TGG | 0.645991 | 8_2:-47018817 | None:intergenic |
| GTTTGAGAGGATGAAGAAAA+CGG | 0.647479 | 8_2:-47017581 | None:intergenic |
| GTTACTTTCAAGGATCCACA+AGG | 0.648181 | 8_2:+47019104 | Msa1251230:CDS |
| GCGTAACGGCGTCGAAACTG+GGG | 0.651779 | 8_2:-47017609 | None:intergenic |
| ACATATCAGAAGAAGCGTAA+CGG | 0.662837 | 8_2:-47017623 | None:intergenic |
| AACAGAAAGTCAGTACCGCA+GGG | 0.666312 | 8_2:+47022522 | Msa1251230:CDS |
| AAGAACAATCTCAAAGCATG+CGG | 0.686734 | 8_2:-47018745 | None:intergenic |
| AAGTGTTAGATATCAGACCA+CGG | 0.687790 | 8_2:+47018768 | Msa1251230:five_prime_UTR |
| GCTGAGGGTAAAACTCCTGG+TGG | 0.693763 | 8_2:+47022224 | Msa1251230:CDS |
| CGTGCTTTCGACTATCGTCG+TGG | 0.698859 | 8_2:-47017488 | None:intergenic |
| AAAAGATGTAACTTTCGCCG+AGG | 0.709369 | 8_2:-47022375 | None:intergenic |
| GCTGGTGCATCAGTTGTGAG+TGG | 0.711756 | 8_2:+47022431 | Msa1251230:CDS |
| GCTTTCGACTATCGTCGTGG+TGG | 0.732645 | 8_2:-47017485 | None:intergenic |
| CTTCATTATAGCAGACCCTG+CGG | 0.733885 | 8_2:-47022537 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATAAGAATTAATAAAAA+GGG | - | chr8_2:47018679-47018698 | None:intergenic | 10.0% |
| !! | TTACATAAGAATTAATAAAA+AGG | - | chr8_2:47018680-47018699 | None:intergenic | 10.0% |
| !! | GTATAATAAAACTTAATAAT+GGG | - | chr8_2:47019015-47019034 | None:intergenic | 10.0% |
| !! | TGTATAATAAAACTTAATAA+TGG | - | chr8_2:47019016-47019035 | None:intergenic | 10.0% |
| !! | ATATATCAATTAGATTAATA+CGG | - | chr8_2:47020414-47020433 | None:intergenic | 10.0% |
| !!! | TTTTTTATATATATAATTGC+TGG | - | chr8_2:47021814-47021833 | None:intergenic | 10.0% |
| !! | TTAAATGCAATATCAAAAAA+GGG | - | chr8_2:47018368-47018387 | None:intergenic | 15.0% |
| !! | TTTAAATGCAATATCAAAAA+AGG | - | chr8_2:47018369-47018388 | None:intergenic | 15.0% |
| !! | ATACTAATAGTATAGTTATA+AGG | + | chr8_2:47018394-47018413 | Msa1251230:intron | 15.0% |
| !! | ATCTATTAATTCTTATGTAA+AGG | + | chr8_2:47018481-47018500 | Msa1251230:intron | 15.0% |
| !! | TCTATTAATTCTTATGTAAA+GGG | + | chr8_2:47018482-47018501 | Msa1251230:intron | 15.0% |
| !! | AGTATAAAATTGAATGAAAA+AGG | - | chr8_2:47020361-47020380 | None:intergenic | 15.0% |
| !! | GAACAAATAAAATAGTTTAT+CGG | - | chr8_2:47020477-47020496 | None:intergenic | 15.0% |
| !! | TCAGATTTAATATAAATTGA+AGG | + | chr8_2:47021273-47021292 | Msa1251230:intron | 15.0% |
| !! | CAGATTTAATATAAATTGAA+GGG | + | chr8_2:47021274-47021293 | Msa1251230:intron | 15.0% |
| !! | AGATTTAATATAAATTGAAG+GGG | + | chr8_2:47021275-47021294 | Msa1251230:intron | 15.0% |
| !!! | TCTGATTTATCTTTTTATTT+GGG | + | chr8_2:47021466-47021485 | Msa1251230:intron | 15.0% |
| !! | TTAATAATACTAATCATTGA+AGG | + | chr8_2:47021681-47021700 | Msa1251230:intron | 15.0% |
| !!! | AAATATTACACATTTGTTAT+AGG | - | chr8_2:47022196-47022215 | None:intergenic | 15.0% |
| !!! | TGAAAATTTATTTTTACACA+AGG | + | chr8_2:47023028-47023047 | Msa1251230:three_prime_UTR | 15.0% |
| !!! | GAAAATTTATTTTTACACAA+GGG | + | chr8_2:47023029-47023048 | Msa1251230:three_prime_UTR | 15.0% |
| !! | TTTAAATGTAAAACAAAGAC+CGG | - | chr8_2:47017912-47017931 | None:intergenic | 20.0% |
| !!! | AAATAGAACTATTTGAAATG+TGG | + | chr8_2:47017957-47017976 | Msa1251230:intron | 20.0% |
| !! | TAATAAAAAAATGCAATGAG+TGG | + | chr8_2:47018432-47018451 | Msa1251230:intron | 20.0% |
| !! | CTATTAATTCTTATGTAAAG+GGG | + | chr8_2:47018483-47018502 | Msa1251230:intron | 20.0% |
| !!! | CTATTATTACTTTTAGTCAT+AGG | + | chr8_2:47018709-47018728 | Msa1251230:intron | 20.0% |
| !! | TTGAATATGTTGAAATGAAA+AGG | + | chr8_2:47018944-47018963 | Msa1251230:CDS | 20.0% |
| !! | GTAATGAATATATGATTCTT+TGG | - | chr8_2:47019263-47019282 | None:intergenic | 20.0% |
| !! | TATATTATATGTCTGATTCA+TGG | + | chr8_2:47020072-47020091 | Msa1251230:intron | 20.0% |
| !! | ATATTATATGTCTGATTCAT+GGG | + | chr8_2:47020073-47020092 | Msa1251230:intron | 20.0% |
| !! | AGGATTGAGAATAATAAAAT+AGG | + | chr8_2:47020250-47020269 | Msa1251230:intron | 20.0% |
| !! | GGATTGAGAATAATAAAATA+GGG | + | chr8_2:47020251-47020270 | Msa1251230:intron | 20.0% |
| !!! | AGTTTTTAGTTAAGTTTTTG+TGG | - | chr8_2:47020792-47020811 | None:intergenic | 20.0% |
| !! | ACAAAAACTTAACTAAAAAC+TGG | + | chr8_2:47020791-47020810 | Msa1251230:intron | 20.0% |
| !! | TTAAACCTCTTATAAAAGAT+TGG | - | chr8_2:47020863-47020882 | None:intergenic | 20.0% |
| !!! | TTATATCTAACACTATTTTC+CGG | + | chr8_2:47020974-47020993 | Msa1251230:intron | 20.0% |
| !!! | ATTATCAAAGTTGATCTTTT+TGG | + | chr8_2:47021128-47021147 | Msa1251230:intron | 20.0% |
| !!! | GTCTGATTTATCTTTTTATT+TGG | + | chr8_2:47021465-47021484 | Msa1251230:intron | 20.0% |
| !!! | ATTTGATGCATGTATATTTT+TGG | + | chr8_2:47021741-47021760 | Msa1251230:intron | 20.0% |
| !!! | ACAAATGTGTAATATTTTTC+AGG | + | chr8_2:47022199-47022218 | Msa1251230:intron | 20.0% |
| ! | TTAAATGTAAAACAAAGACC+GGG | - | chr8_2:47017911-47017930 | None:intergenic | 25.0% |
| ! | AGTATCAGTTAGTTAAAATC+GGG | - | chr8_2:47018165-47018184 | None:intergenic | 25.0% |
| ! | CAGTATCAGTTAGTTAAAAT+CGG | - | chr8_2:47018166-47018185 | None:intergenic | 25.0% |
| ! | AAGAAAGCAATAAATGACAA+AGG | - | chr8_2:47018295-47018314 | None:intergenic | 25.0% |
| !!! | GTTACATGTATTTTATTTGC+AGG | + | chr8_2:47018840-47018859 | Msa1251230:CDS | 25.0% |
| ! | AAAATGAAAAGAACTCCTTT+AGG | - | chr8_2:47018915-47018934 | None:intergenic | 25.0% |
| ! | TAATATATGTGTATCATGCA+TGG | + | chr8_2:47019179-47019198 | Msa1251230:intron | 25.0% |
| ! | ATATTCATTACTGAGATTTC+AGG | + | chr8_2:47019272-47019291 | Msa1251230:intron | 25.0% |
| ! | TATTCATTACTGAGATTTCA+GGG | + | chr8_2:47019273-47019292 | Msa1251230:intron | 25.0% |
| ! | AGAAAACTGATATTTACTTG+AGG | + | chr8_2:47019398-47019417 | Msa1251230:intron | 25.0% |
| ! | CATGTTTATGTGAAATGAAT+AGG | - | chr8_2:47019800-47019819 | None:intergenic | 25.0% |
| ! | GAATCTATATCATAAGAAAG+AGG | - | chr8_2:47019901-47019920 | None:intergenic | 25.0% |
| ! | AAATCTCAGAATTTCAGATA+CGG | - | chr8_2:47019923-47019942 | None:intergenic | 25.0% |
| ! | TATTATATGTCTGATTCATG+GGG | + | chr8_2:47020074-47020093 | Msa1251230:intron | 25.0% |
| !!! | TTATTTTTCAGCACAAAGTA+GGG | - | chr8_2:47020161-47020180 | None:intergenic | 25.0% |
| !! | TTCAATTTTATACTCCCTAA+AGG | + | chr8_2:47020367-47020386 | Msa1251230:intron | 25.0% |
| !!! | TGTTCTATTTTGATAGAAAC+TGG | + | chr8_2:47020492-47020511 | Msa1251230:intron | 25.0% |
| ! | TATTCAGTTATATATCCTAC+TGG | - | chr8_2:47020520-47020539 | None:intergenic | 25.0% |
| ! | ACTGTATTACTGTATATTCT+CGG | + | chr8_2:47020543-47020562 | Msa1251230:intron | 25.0% |
| ! | AGCAAGAATAAAAAGGAAAA+GGG | - | chr8_2:47020719-47020738 | None:intergenic | 25.0% |
| ! | TAGCAAGAATAAAAAGGAAA+AGG | - | chr8_2:47020720-47020739 | None:intergenic | 25.0% |
| !! | TCTTATAAAAGATTGGCTAT+AGG | - | chr8_2:47020856-47020875 | None:intergenic | 25.0% |
| !! | TATAGCCAATCTTTTATAAG+AGG | + | chr8_2:47020855-47020874 | Msa1251230:intron | 25.0% |
| ! | AACATCTTCTCTTAATATAG+AGG | + | chr8_2:47020881-47020900 | Msa1251230:intron | 25.0% |
| ! | GTTGCTTAATCTTTATGTTA+TGG | + | chr8_2:47021105-47021124 | Msa1251230:intron | 25.0% |
| !! | TTTTATCTTAAAGCAGTGAA+GGG | - | chr8_2:47021202-47021221 | None:intergenic | 25.0% |
| !! | ATTTTATCTTAAAGCAGTGA+AGG | - | chr8_2:47021203-47021222 | None:intergenic | 25.0% |
| !!! | ACACTAGTTGTCTTATTTTT+GGG | + | chr8_2:47021366-47021385 | Msa1251230:intron | 25.0% |
| ! | AAATTGAAAAGAATAGCCTT+TGG | + | chr8_2:47021402-47021421 | Msa1251230:intron | 25.0% |
| ! | AATAAGTTTACCAACATAGT+AGG | - | chr8_2:47021549-47021568 | None:intergenic | 25.0% |
| ! | TCCTTAAAATAGCATCAAAT+TGG | + | chr8_2:47021630-47021649 | Msa1251230:intron | 25.0% |
| !!! | ACCAATTTGATGCTATTTTA+AGG | - | chr8_2:47021634-47021653 | None:intergenic | 25.0% |
| ! | AAGAAACAAGACACTTAATT+TGG | - | chr8_2:47021771-47021790 | None:intergenic | 25.0% |
| ! | TTTGGATAAGTGGTATAATA+TGG | + | chr8_2:47021987-47022006 | Msa1251230:intron | 25.0% |
| ! | GAAATGAATATCCTAGTTAA+TGG | - | chr8_2:47022109-47022128 | None:intergenic | 25.0% |
| ! | GATATTCATTTCATCCTATT+CGG | + | chr8_2:47022117-47022136 | Msa1251230:intron | 25.0% |
| ! | ATGTACAAGAAGTAAATCAA+AGG | - | chr8_2:47022790-47022809 | None:intergenic | 25.0% |
| ! | AGTCTATGGAGAAAAATATA+AGG | + | chr8_2:47022971-47022990 | Msa1251230:three_prime_UTR | 25.0% |
| ! | GTCTATGGAGAAAAATATAA+GGG | + | chr8_2:47022972-47022991 | Msa1251230:three_prime_UTR | 25.0% |
| !!! | AATTTATTTTTACACAAGGG+TGG | + | chr8_2:47023032-47023051 | Msa1251230:three_prime_UTR | 25.0% |
| CTGATATAAGAAGAGTAAGA+CGG | - | chr8_2:47017721-47017740 | None:intergenic | 30.0% | |
| TCTTCTTATATCAGACTGTT+TGG | + | chr8_2:47017727-47017746 | Msa1251230:intron | 30.0% | |
| TCGTAGAACTTATGCAAATA+AGG | - | chr8_2:47017790-47017809 | None:intergenic | 30.0% | |
| TAAATGTAAAACAAAGACCG+GGG | - | chr8_2:47017910-47017929 | None:intergenic | 30.0% | |
| ! | ACTATTTGAAATGTGGTTTG+AGG | + | chr8_2:47017964-47017983 | Msa1251230:intron | 30.0% |
| ! | TTTGCTATGCAATTTACACA+TGG | + | chr8_2:47018010-47018029 | Msa1251230:intron | 30.0% |
| !! | CATGGATTTTGAGTGATTTA+AGG | + | chr8_2:47018028-47018047 | Msa1251230:intron | 30.0% |
| TAAAATCGTAAATCGTGCAA+TGG | - | chr8_2:47018133-47018152 | None:intergenic | 30.0% | |
| !!! | CGATTTTAACTAACTGATAC+TGG | + | chr8_2:47018164-47018183 | Msa1251230:intron | 30.0% |
| AACCTCGTGTATAAAAAACA+GGG | + | chr8_2:47018574-47018593 | Msa1251230:intron | 30.0% | |
| AATTAATAAAAAGGGCAACC+CGG | - | chr8_2:47018671-47018690 | None:intergenic | 30.0% | |
| CAGGTCAAAACTATAAAAGT+CGG | + | chr8_2:47018859-47018878 | Msa1251230:CDS | 30.0% | |
| ! | AAGGAGTTCTTTTCATTTTC+TGG | + | chr8_2:47018916-47018935 | Msa1251230:CDS | 30.0% |
| !! | AATTGCCTTTGTTACTTTCA+AGG | + | chr8_2:47019094-47019113 | Msa1251230:CDS | 30.0% |
| CAATCCAAGACAAATTGATT+GGG | - | chr8_2:47019236-47019255 | None:intergenic | 30.0% | |
| ACAATCCAAGACAAATTGAT+TGG | - | chr8_2:47019237-47019256 | None:intergenic | 30.0% | |
| ! | GTGTGTCATTATCCTAATAA+AGG | + | chr8_2:47019313-47019332 | Msa1251230:intron | 30.0% |
| !!! | AGTTGACTTGTTTAGCTTTT+TGG | + | chr8_2:47019346-47019365 | Msa1251230:intron | 30.0% |
| ! | AAACTGATAATGCAGCATAA+GGG | + | chr8_2:47019444-47019463 | Msa1251230:intron | 30.0% |
| AGGATACTTATCACCAAAAA+AGG | - | chr8_2:47019518-47019537 | None:intergenic | 30.0% | |
| ! | TTTCATTTTGTCAACACCAA+GGG | + | chr8_2:47019863-47019882 | Msa1251230:intron | 30.0% |
| ACCAACTATCACAAAAACTT+AGG | + | chr8_2:47020023-47020042 | Msa1251230:intron | 30.0% | |
| ATCACAAAAACTTAGGCTAT+TGG | + | chr8_2:47020030-47020049 | Msa1251230:intron | 30.0% | |
| TCACAAAAACTTAGGCTATT+GGG | + | chr8_2:47020031-47020050 | Msa1251230:intron | 30.0% | |
| !!! | GTTATTTTTCAGCACAAAGT+AGG | - | chr8_2:47020162-47020181 | None:intergenic | 30.0% |
| ! | ACTCTTATTTAGACCAATAG+AGG | + | chr8_2:47020180-47020199 | Msa1251230:intron | 30.0% |
| AGATTGAACTCTAGATCAAA+TGG | + | chr8_2:47020209-47020228 | Msa1251230:intron | 30.0% | |
| ACGGAGAATAATGATAGAAA+GGG | - | chr8_2:47020395-47020414 | None:intergenic | 30.0% | |
| TACGGAGAATAATGATAGAA+AGG | - | chr8_2:47020396-47020415 | None:intergenic | 30.0% | |
| AGTTTATCGGTATATCAGTT+TGG | - | chr8_2:47020464-47020483 | None:intergenic | 30.0% | |
| AAGTTATCAAGTGGTTGATT+GGG | - | chr8_2:47020674-47020693 | None:intergenic | 30.0% | |
| TGTGGTTAGCAAGAATAAAA+AGG | - | chr8_2:47020726-47020745 | None:intergenic | 30.0% | |
| ATGTTTGTCAATTATGTGTG+TGG | - | chr8_2:47020744-47020763 | None:intergenic | 30.0% | |
| ! | ACTTAACTAAAAACTGGCTT+TGG | + | chr8_2:47020797-47020816 | Msa1251230:intron | 30.0% |
| ! | TATAAAAGATTGGCTATAGG+AGG | - | chr8_2:47020853-47020872 | None:intergenic | 30.0% |
| ! | AGTCAATAGCTTAAGCTTTT+GGG | - | chr8_2:47020935-47020954 | None:intergenic | 30.0% |
| ! | CTATTTTCCGGCAATTTTAT+TGG | + | chr8_2:47020986-47021005 | Msa1251230:intron | 30.0% |
| TGCATATCCAATAAAATTGC+CGG | - | chr8_2:47020996-47021015 | None:intergenic | 30.0% | |
| ACCAACTAAGTATACCAAAT+AGG | - | chr8_2:47021025-47021044 | None:intergenic | 30.0% | |
| AAATAAGACAACTAGTGTCT+AGG | - | chr8_2:47021364-47021383 | None:intergenic | 30.0% | |
| !!! | GACACTAGTTGTCTTATTTT+TGG | + | chr8_2:47021365-47021384 | Msa1251230:intron | 30.0% |
| ! | CTATGTTGGTAAACTTATTC+TGG | + | chr8_2:47021550-47021569 | Msa1251230:intron | 30.0% |
| TGATATCATTCACTGCTAAA+TGG | + | chr8_2:47021711-47021730 | Msa1251230:intron | 30.0% | |
| !! | GTGTCTTGTTTCTTTAATGT+AGG | + | chr8_2:47021777-47021796 | Msa1251230:intron | 30.0% |
| !! | ACCAAGTTTTTCAACATATC+AGG | + | chr8_2:47021840-47021859 | Msa1251230:intron | 30.0% |
| !! | CCAAGTTTTTCAACATATCA+GGG | + | chr8_2:47021841-47021860 | Msa1251230:intron | 30.0% |
| !! | CAAGTTTTTCAACATATCAG+GGG | + | chr8_2:47021842-47021861 | Msa1251230:intron | 30.0% |
| !! | AAGTTTTTCAACATATCAGG+GGG | + | chr8_2:47021843-47021862 | Msa1251230:intron | 30.0% |
| TTTGTCAGTTAACATAACTC+TGG | + | chr8_2:47021879-47021898 | Msa1251230:CDS | 30.0% | |
| ! | ATGTTTGGAATGGTGATATA+AGG | - | chr8_2:47022085-47022104 | None:intergenic | 30.0% |
| AGTTAATGGTATGTTTGGAA+TGG | - | chr8_2:47022095-47022114 | None:intergenic | 30.0% | |
| TTCCAAACATACCATTAACT+AGG | + | chr8_2:47022095-47022114 | Msa1251230:intron | 30.0% | |
| ATCCTAGTTAATGGTATGTT+TGG | - | chr8_2:47022100-47022119 | None:intergenic | 30.0% | |
| GGCAAAAATATCCTAGTTAA+TGG | - | chr8_2:47022175-47022194 | None:intergenic | 30.0% | |
| ! | ACATCTTTTGACCAAAAACT+TGG | + | chr8_2:47022389-47022408 | Msa1251230:CDS | 30.0% |
| ! | CATCTTTTGACCAAAAACTT+GGG | + | chr8_2:47022390-47022409 | Msa1251230:CDS | 30.0% |
| ACAGAAAACAAAAGAGAAAG+TGG | + | chr8_2:47022637-47022656 | Msa1251230:CDS | 30.0% | |
| AATTTGCAGGAGTTTCAAAA+AGG | - | chr8_2:47022814-47022833 | None:intergenic | 30.0% | |
| ! | GACAGATTTTACTAGTTACT+TGG | + | chr8_2:47022856-47022875 | Msa1251230:three_prime_UTR | 30.0% |
| AGAAACTGAATTTCCAAAGT+TGG | + | chr8_2:47022918-47022937 | Msa1251230:three_prime_UTR | 30.0% | |
| AAGCATATCATTTCCAACTT+TGG | - | chr8_2:47022934-47022953 | None:intergenic | 30.0% | |
| ! | TTTTTCTCCATAGACTGAAT+GGG | - | chr8_2:47022967-47022986 | None:intergenic | 30.0% |
| ! | ATTTTTCTCCATAGACTGAA+TGG | - | chr8_2:47022968-47022987 | None:intergenic | 30.0% |
| TGGAGAAAAATATAAGGGAA+TGG | + | chr8_2:47022977-47022996 | Msa1251230:three_prime_UTR | 30.0% | |
| GTTTGAGAGGATGAAGAAAA+CGG | - | chr8_2:47017584-47017603 | None:intergenic | 35.0% | |
| ! | ACATATCAGAAGAAGCGTAA+CGG | - | chr8_2:47017626-47017645 | None:intergenic | 35.0% |
| TTACGCTTCTTCTGATATGT+CGG | + | chr8_2:47017626-47017645 | Msa1251230:five_prime_UTR | 35.0% | |
| AAATGTAAAACAAAGACCGG+GGG | - | chr8_2:47017909-47017928 | None:intergenic | 35.0% | |
| CAATAAATGACAAAGGAGAC+AGG | - | chr8_2:47018288-47018307 | None:intergenic | 35.0% | |
| TCACATGACAACAACTTTAC+CGG | - | chr8_2:47018523-47018542 | None:intergenic | 35.0% | |
| TCATGTGACTTAAACGTCAT+AGG | + | chr8_2:47018535-47018554 | Msa1251230:intron | 35.0% | |
| CAACCTCGTGTATAAAAAAC+AGG | + | chr8_2:47018573-47018592 | Msa1251230:intron | 35.0% | |
| !!! | TACCCTGTTTTTTATACACG+AGG | - | chr8_2:47018579-47018598 | None:intergenic | 35.0% |
| CGTGTATAAAAAACAGGGTA+AGG | + | chr8_2:47018579-47018598 | Msa1251230:intron | 35.0% | |
| CATACAATACACCAAATGGT+GGG | + | chr8_2:47018605-47018624 | Msa1251230:intron | 35.0% | |
| ! | ACTTTTAGTCATAGGAGTCT+AGG | + | chr8_2:47018717-47018736 | Msa1251230:intron | 35.0% |
| AAGAACAATCTCAAAGCATG+CGG | - | chr8_2:47018748-47018767 | None:intergenic | 35.0% | |
| AAGTGTTAGATATCAGACCA+CGG | + | chr8_2:47018768-47018787 | Msa1251230:five_prime_UTR | 35.0% | |
| AAAAGTCGGTAATGTTTCCT+TGG | + | chr8_2:47018873-47018892 | Msa1251230:CDS | 35.0% | |
| AAAGTCGGTAATGTTTCCTT+GGG | + | chr8_2:47018874-47018893 | Msa1251230:CDS | 35.0% | |
| TGGATCCTTGAAAGTAACAA+AGG | - | chr8_2:47019102-47019121 | None:intergenic | 35.0% | |
| ATTAGCTGATGATCAATGTC+AGG | - | chr8_2:47019163-47019182 | None:intergenic | 35.0% | |
| AAGCTAAACAAGTCAACTCA+AGG | - | chr8_2:47019344-47019363 | None:intergenic | 35.0% | |
| ! | GAAACTGATAATGCAGCATA+AGG | + | chr8_2:47019443-47019462 | Msa1251230:intron | 35.0% |
| ACTTATCACCAAAAAAGGCA+GGG | - | chr8_2:47019513-47019532 | None:intergenic | 35.0% | |
| TACTTATCACCAAAAAAGGC+AGG | - | chr8_2:47019514-47019533 | None:intergenic | 35.0% | |
| AAATGAACGAGATCAAATGC+TGG | - | chr8_2:47019638-47019657 | None:intergenic | 35.0% | |
| AATCCCTTGCTTGTTTAGTT+TGG | + | chr8_2:47019710-47019729 | Msa1251230:intron | 35.0% | |
| !! | TTGTTTAGTTTGGACCTTAG+AGG | + | chr8_2:47019720-47019739 | Msa1251230:intron | 35.0% |
| ! | TATGTCTCAGCTACTTTCTT+AGG | + | chr8_2:47019750-47019769 | Msa1251230:intron | 35.0% |
| ! | AGCTACTTTCTTAGGCATTT+AGG | + | chr8_2:47019758-47019777 | Msa1251230:intron | 35.0% |
| TGCACAATATGAACTAACAG+TGG | - | chr8_2:47019836-47019855 | None:intergenic | 35.0% | |
| ! | GTGTTGACAAAATGAAACAG+AGG | - | chr8_2:47019860-47019879 | None:intergenic | 35.0% |
| ! | GTTTCATTTTGTCAACACCA+AGG | + | chr8_2:47019862-47019881 | Msa1251230:intron | 35.0% |
| CTTTGTTGAGCATAAACATC+AGG | + | chr8_2:47019946-47019965 | Msa1251230:intron | 35.0% | |
| TTGAGCATAAACATCAGGTT+TGG | + | chr8_2:47019951-47019970 | Msa1251230:intron | 35.0% | |
| ! | GCCTAAGTTTTTGTGATAGT+TGG | - | chr8_2:47020027-47020046 | None:intergenic | 35.0% |
| TCAATCTCTGTTTCCTCTAT+TGG | - | chr8_2:47020196-47020215 | None:intergenic | 35.0% | |
| AAGAAAGAATTCTCCACCAA+GGG | + | chr8_2:47020332-47020351 | Msa1251230:intron | 35.0% | |
| TGAATGAAAAAGGAAACCCT+TGG | - | chr8_2:47020351-47020370 | None:intergenic | 35.0% | |
| GGAGAATAATGATAGAAAGG+GGG | - | chr8_2:47020393-47020412 | None:intergenic | 35.0% | |
| CGGAGAATAATGATAGAAAG+GGG | - | chr8_2:47020394-47020413 | None:intergenic | 35.0% | |
| GTATTACTGTATATTCTCGG+AGG | + | chr8_2:47020546-47020565 | Msa1251230:intron | 35.0% | |
| CTGTTGTGTATGTCAGATTT+GGG | - | chr8_2:47020579-47020598 | None:intergenic | 35.0% | |
| TCTGTTGTGTATGTCAGATT+TGG | - | chr8_2:47020580-47020599 | None:intergenic | 35.0% | |
| ACAGAATTGAAAAGTTCCAC+AGG | + | chr8_2:47020595-47020614 | Msa1251230:intron | 35.0% | |
| AGAATCAAGCTCTTGAAACT+TGG | - | chr8_2:47020645-47020664 | None:intergenic | 35.0% | |
| GAAGTTATCAAGTGGTTGAT+TGG | - | chr8_2:47020675-47020694 | None:intergenic | 35.0% | |
| GTTGTCTAGAAGTTATCAAG+TGG | - | chr8_2:47020683-47020702 | None:intergenic | 35.0% | |
| ! | CAGTCAATAGCTTAAGCTTT+TGG | - | chr8_2:47020936-47020955 | None:intergenic | 35.0% |
| GCCTATTTGGTATACTTAGT+TGG | + | chr8_2:47021021-47021040 | Msa1251230:intron | 35.0% | |
| TGCTACTAGAACTAGAAGAA+TGG | + | chr8_2:47021230-47021249 | Msa1251230:intron | 35.0% | |
| GCTACTAGAACTAGAAGAAT+GGG | + | chr8_2:47021231-47021250 | Msa1251230:intron | 35.0% | |
| GCAACATATCATACTTCCAA+AGG | - | chr8_2:47021421-47021440 | None:intergenic | 35.0% | |
| TTGTTGACATCCTACTATGT+TGG | + | chr8_2:47021536-47021555 | Msa1251230:intron | 35.0% | |
| ATGTCACTGATATCTATGAG+AGG | - | chr8_2:47021593-47021612 | None:intergenic | 35.0% | |
| AAATAGCATCAAATTGGTCC+TGG | + | chr8_2:47021636-47021655 | Msa1251230:intron | 35.0% | |
| CCCTGATATGTTGAAAAACT+TGG | - | chr8_2:47021844-47021863 | None:intergenic | 35.0% | |
| TTAACTAGAGGGTCTTTACA+AGG | - | chr8_2:47021951-47021970 | None:intergenic | 35.0% | |
| ATGAACTCATGTCATCCTAT+TGG | + | chr8_2:47022050-47022069 | Msa1251230:intron | 35.0% | |
| TGAACTCATGTCATCCTATT+GGG | + | chr8_2:47022051-47022070 | Msa1251230:intron | 35.0% | |
| ! | TTTGGAATGGTGATATAAGG+TGG | - | chr8_2:47022082-47022101 | None:intergenic | 35.0% |
| ! | TTTGGAATGGTGATATAAGG+TGG | - | chr8_2:47022082-47022101 | None:intergenic | 35.0% |
| ! | GTGTTTGGAATGGTGATATA+AGG | - | chr8_2:47022151-47022170 | None:intergenic | 35.0% |
| AGTTAATGGTGTGTTTGGAA+TGG | - | chr8_2:47022161-47022180 | None:intergenic | 35.0% | |
| TTCCAAACACACCATTAACT+AGG | + | chr8_2:47022161-47022180 | Msa1251230:intron | 35.0% | |
| ATCCTAGTTAATGGTGTGTT+TGG | - | chr8_2:47022166-47022185 | None:intergenic | 35.0% | |
| TTGCGAAGGGATTTATCTTA+GGG | + | chr8_2:47022294-47022313 | Msa1251230:CDS | 35.0% | |
| CTTAGTGAGAAATTAACTGC+TGG | + | chr8_2:47022413-47022432 | Msa1251230:CDS | 35.0% | |
| AAGAATCGCTATATACTCAC+TGG | + | chr8_2:47022557-47022576 | Msa1251230:CDS | 35.0% | |
| ! | TGCTTTTAGTAAGGTTGCTA+AGG | + | chr8_2:47022598-47022617 | Msa1251230:CDS | 35.0% |
| GTGGAAAATGAAGGATTATC+AGG | + | chr8_2:47023051-47023070 | Msa1251230:three_prime_UTR | 35.0% | |
| !! | TTTGACTTTGAAACGCGTAC+TGG | - | chr8_2:47017526-47017545 | None:intergenic | 40.0% |
| CTAGGAGGAGCAAGATTTAT+GGG | - | chr8_2:47017696-47017715 | None:intergenic | 40.0% | |
| TCTAGGAGGAGCAAGATTTA+TGG | - | chr8_2:47017697-47017716 | None:intergenic | 40.0% | |
| AAGAAGAGTAAGACGGATCT+AGG | - | chr8_2:47017714-47017733 | None:intergenic | 40.0% | |
| ! | TGATACTGGCTGATCAAGTT+AGG | + | chr8_2:47018178-47018197 | Msa1251230:intron | 40.0% |
| ! | GATACTGGCTGATCAAGTTA+GGG | + | chr8_2:47018179-47018198 | Msa1251230:intron | 40.0% |
| !! | TGTTTTCAGTGTCGAGCTTT+TGG | + | chr8_2:47018244-47018263 | Msa1251230:intron | 40.0% |
| !! | GTTTTCAGTGTCGAGCTTTT+GGG | + | chr8_2:47018245-47018264 | Msa1251230:intron | 40.0% |
| AATGACAAAGGAGACAGGAA+AGG | - | chr8_2:47018283-47018302 | None:intergenic | 40.0% | |
| ! | TTATACACGAGGTTGTTTCC+AGG | - | chr8_2:47018568-47018587 | None:intergenic | 40.0% |
| GCTGCATACAATACACCAAA+TGG | + | chr8_2:47018601-47018620 | Msa1251230:intron | 40.0% | |
| GCATACAATACACCAAATGG+TGG | + | chr8_2:47018604-47018623 | Msa1251230:intron | 40.0% | |
| AGTGTTAGATATCAGACCAC+GGG | + | chr8_2:47018769-47018788 | Msa1251230:five_prime_UTR | 40.0% | |
| ! | ACTGAACGTTTAGAACCTTG+TGG | - | chr8_2:47018820-47018839 | None:intergenic | 40.0% |
| AGCATCTGAACAAGACCTAA+AGG | + | chr8_2:47018897-47018916 | Msa1251230:CDS | 40.0% | |
| ! | GTTACTTTCAAGGATCCACA+AGG | + | chr8_2:47019104-47019123 | Msa1251230:CDS | 40.0% |
| AGCACCCAATCAATTTGTCT+TGG | + | chr8_2:47019229-47019248 | Msa1251230:intron | 40.0% | |
| CTCAAGGCAATGCCTTTATT+AGG | - | chr8_2:47019328-47019347 | None:intergenic | 40.0% | |
| TGGCTAGATAATGCAGCATA+AGG | + | chr8_2:47019366-47019385 | Msa1251230:intron | 40.0% | |
| GGCTAGATAATGCAGCATAA+GGG | + | chr8_2:47019367-47019386 | Msa1251230:intron | 40.0% | |
| ! | ATTTTCACCCCTGCCTTTTT+TGG | + | chr8_2:47019502-47019521 | Msa1251230:intron | 40.0% |
| CTTATCACCAAAAAAGGCAG+GGG | - | chr8_2:47019512-47019531 | None:intergenic | 40.0% | |
| AGTATCCTCCATTTCCCAAA+AGG | + | chr8_2:47019530-47019549 | Msa1251230:intron | 40.0% | |
| !! | AAATGCCTTTTGGGAAATGG+AGG | - | chr8_2:47019538-47019557 | None:intergenic | 40.0% |
| !! | GAGAAATGCCTTTTGGGAAA+TGG | - | chr8_2:47019541-47019560 | None:intergenic | 40.0% |
| ! | TTACGCGAGAAATGCCTTTT+GGG | - | chr8_2:47019547-47019566 | None:intergenic | 40.0% |
| ! | ATTACGCGAGAAATGCCTTT+TGG | - | chr8_2:47019548-47019567 | None:intergenic | 40.0% |
| GGTCCAAACTAAACAAGCAA+GGG | - | chr8_2:47019716-47019735 | None:intergenic | 40.0% | |
| AGGTCCAAACTAAACAAGCA+AGG | - | chr8_2:47019717-47019736 | None:intergenic | 40.0% | |
| AGACATATATGCAGCCTCTA+AGG | - | chr8_2:47019737-47019756 | None:intergenic | 40.0% | |
| AAACTTAGGCTATTGGGTGA+AGG | + | chr8_2:47020037-47020056 | Msa1251230:intron | 40.0% | |
| CAAAGGGCTCTTATGTTAGT+GGG | - | chr8_2:47020108-47020127 | None:intergenic | 40.0% | |
| ! | TTTTCAGCACAAAGTAGGGT+GGG | - | chr8_2:47020157-47020176 | None:intergenic | 40.0% |
| !! | TTTTTCAGCACAAAGTAGGG+TGG | - | chr8_2:47020158-47020177 | None:intergenic | 40.0% |
| GAAGAAAGAATTCTCCACCA+AGG | + | chr8_2:47020331-47020350 | Msa1251230:intron | 40.0% | |
| ATGAAAAAGGAAACCCTTGG+TGG | - | chr8_2:47020348-47020367 | None:intergenic | 40.0% | |
| TGATAGAAACTGGTACCAGT+AGG | + | chr8_2:47020502-47020521 | Msa1251230:intron | 40.0% | |
| TCAAGCTCTTGAAACTTGGT+AGG | - | chr8_2:47020641-47020660 | None:intergenic | 40.0% | |
| TATCAAGTGGTTGATTGGGA+AGG | - | chr8_2:47020670-47020689 | None:intergenic | 40.0% | |
| !! | AAACTGGCTTTGGTCAGTAT+TGG | + | chr8_2:47020807-47020826 | Msa1251230:intron | 40.0% |
| GATATGCATCTCTGCCTATT+TGG | + | chr8_2:47021008-47021027 | Msa1251230:intron | 40.0% | |
| ! | CCTTCTCTTTTCTCTGAACA+TGG | - | chr8_2:47021049-47021068 | None:intergenic | 40.0% |
| CCATGTTCAGAGAAAAGAGA+AGG | + | chr8_2:47021046-47021065 | Msa1251230:intron | 40.0% | |
| ATTCATGTGATGTCTGATGC+TGG | + | chr8_2:47021168-47021187 | Msa1251230:intron | 40.0% | |
| TCAGACATATCCCAAAGTAG+AGG | - | chr8_2:47021451-47021470 | None:intergenic | 40.0% | |
| TGAGAGGTTGCATACATCAT+TGG | - | chr8_2:47021577-47021596 | None:intergenic | 40.0% | |
| CCTTGAGCACATTAACTAGA+GGG | - | chr8_2:47021962-47021981 | None:intergenic | 40.0% | |
| CCTCTAGTTAATGTGCTCAA+GGG | + | chr8_2:47021960-47021979 | Msa1251230:intron | 40.0% | |
| ! | AATGTGCTCAAGGGTATGTT+TGG | + | chr8_2:47021969-47021988 | Msa1251230:intron | 40.0% |
| ! | CAAGGGTATGTTTGGATAAG+TGG | + | chr8_2:47021977-47021996 | Msa1251230:intron | 40.0% |
| ATAAGGTGGAATAGCCCAAT+AGG | - | chr8_2:47022068-47022087 | None:intergenic | 40.0% | |
| ATAAGGTGGAATAGCCGAAT+AGG | - | chr8_2:47022134-47022153 | None:intergenic | 40.0% | |
| !!! | TAATATTTTTCAGGCCGCTG+AGG | + | chr8_2:47022208-47022227 | Msa1251230:intron | 40.0% |
| !!! | AATATTTTTCAGGCCGCTGA+GGG | + | chr8_2:47022209-47022228 | Msa1251230:intron | 40.0% |
| CTTGCGAAGGGATTTATCTT+AGG | + | chr8_2:47022293-47022312 | Msa1251230:CDS | 40.0% | |
| AGATGCTGTGAACAAAGCAA+AGG | + | chr8_2:47022319-47022338 | Msa1251230:CDS | 40.0% | |
| GATGCTGTGAACAAAGCAAA+GGG | + | chr8_2:47022320-47022339 | Msa1251230:CDS | 40.0% | |
| AAAAGATGTAACTTTCGCCG+AGG | - | chr8_2:47022378-47022397 | None:intergenic | 40.0% | |
| ! | TCTCACTAAGCCCAAGTTTT+TGG | - | chr8_2:47022403-47022422 | None:intergenic | 40.0% |
| ATATACTCACTGGTACTACC+TGG | + | chr8_2:47022567-47022586 | Msa1251230:CDS | 40.0% | |
| TATACTCACTGGTACTACCT+GGG | + | chr8_2:47022568-47022587 | Msa1251230:CDS | 40.0% | |
| ! | GGTAACTGGTGCTTTTAGTA+AGG | + | chr8_2:47022589-47022608 | Msa1251230:CDS | 40.0% |
| GAAAGTGGAAAATGCAGAAG+TGG | + | chr8_2:47022652-47022671 | Msa1251230:CDS | 40.0% | |
| CTCACACTGAAACAATTTGC+AGG | - | chr8_2:47022827-47022846 | None:intergenic | 40.0% | |
| ! | GTCTTTTCCCATTCAGTCTA+TGG | + | chr8_2:47022957-47022976 | Msa1251230:three_prime_UTR | 40.0% |
| TACACAAGGGTGGAAAATGA+AGG | + | chr8_2:47023042-47023061 | Msa1251230:three_prime_UTR | 40.0% | |
| AAGAGTAAGACGGATCTAGG+AGG | - | chr8_2:47017711-47017730 | None:intergenic | 45.0% | |
| !!! | AGTGTCGAGCTTTTGGGTTA+AGG | + | chr8_2:47018251-47018270 | Msa1251230:intron | 45.0% |
| CTTATGTAAAGGGGTAGCCT+TGG | + | chr8_2:47018492-47018511 | Msa1251230:intron | 45.0% | |
| AACGTCATAGGTTCAAGTCC+TGG | + | chr8_2:47018547-47018566 | Msa1251230:intron | 45.0% | |
| GGAGTGTATGATGCAGAGAT+GGG | + | chr8_2:47018790-47018809 | Msa1251230:exon | 45.0% | |
| GAGGTTCACAATGAAACCCT+TGG | - | chr8_2:47019882-47019901 | None:intergenic | 45.0% | |
| ! | ATTGGGTGAAGGCACACAAA+TGG | + | chr8_2:47020048-47020067 | Msa1251230:intron | 45.0% |
| ! | GCTCTTATGTTAGTGGGCAA+GGG | - | chr8_2:47020102-47020121 | None:intergenic | 45.0% |
| CCAAAGGGCTCTTATGTTAG+TGG | - | chr8_2:47020109-47020128 | None:intergenic | 45.0% | |
| CCACTAACATAAGAGCCCTT+TGG | + | chr8_2:47020106-47020125 | Msa1251230:intron | 45.0% | |
| AACATAAGAGCCCTTTGGTC+TGG | + | chr8_2:47020111-47020130 | Msa1251230:intron | 45.0% | |
| GTCTACACTTCCAGACCAAA+GGG | - | chr8_2:47020124-47020143 | None:intergenic | 45.0% | |
| TGTCTACACTTCCAGACCAA+AGG | - | chr8_2:47020125-47020144 | None:intergenic | 45.0% | |
| ! | TGGAAGTGTAGACAATGCAC+AGG | + | chr8_2:47020131-47020150 | Msa1251230:intron | 45.0% |
| GGTCAATGTGTTACGAACTC+AGG | + | chr8_2:47020230-47020249 | Msa1251230:intron | 45.0% | |
| TGATAGAAAGGGGGCCTTTA+GGG | - | chr8_2:47020384-47020403 | None:intergenic | 45.0% | |
| ATGATAGAAAGGGGGCCTTT+AGG | - | chr8_2:47020385-47020404 | None:intergenic | 45.0% | |
| ! | ACAGGAAAGTGCAGTAGACA+CGG | + | chr8_2:47020613-47020632 | Msa1251230:intron | 45.0% |
| !! | TTGGTCAGTATTGGCCTTCT+CGG | + | chr8_2:47020816-47020835 | Msa1251230:intron | 45.0% |
| GGGATAGCTAATTCACGACA+TGG | - | chr8_2:47020915-47020934 | None:intergenic | 45.0% | |
| ! | AAGAGAAGGACTGTGCTGTT+AGG | + | chr8_2:47021060-47021079 | Msa1251230:intron | 45.0% |
| TTGCCTAAGTGCCTCTACTT+TGG | + | chr8_2:47021437-47021456 | Msa1251230:intron | 45.0% | |
| TGCCTAAGTGCCTCTACTTT+GGG | + | chr8_2:47021438-47021457 | Msa1251230:intron | 45.0% | |
| !! | ATCCCAAAGTAGAGGCACTT+AGG | - | chr8_2:47021443-47021462 | None:intergenic | 45.0% |
| AGCATCAAATTGGTCCTGGA+AGG | + | chr8_2:47021640-47021659 | Msa1251230:intron | 45.0% | |
| GCAGGTGGAAGTTTGTAATC+TGG | - | chr8_2:47021907-47021926 | None:intergenic | 45.0% | |
| CCCTCTAGTTAATGTGCTCA+AGG | + | chr8_2:47021959-47021978 | Msa1251230:intron | 45.0% | |
| CCCTTGAGCACATTAACTAG+AGG | - | chr8_2:47021963-47021982 | None:intergenic | 45.0% | |
| ! | AGCAGCTGCAAATGCTGATT+TGG | - | chr8_2:47022501-47022520 | None:intergenic | 45.0% |
| AACAGAAAGTCAGTACCGCA+GGG | + | chr8_2:47022522-47022541 | Msa1251230:CDS | 45.0% | |
| CTTCATTATAGCAGACCCTG+CGG | - | chr8_2:47022540-47022559 | None:intergenic | 45.0% | |
| !! | ACTAAAAGCACCAGTTACCC+AGG | - | chr8_2:47022588-47022607 | None:intergenic | 45.0% |
| !!! | TAAGTTTTTTTTTTTTTTTT+TGG | + | chr8_2:47019472-47019491 | Msa1251230:intron | 5.0% |
| !!! | TATATTTAAAATTTTATCAT+TGG | + | chr8_2:47021492-47021511 | Msa1251230:intron | 5.0% |
| AACTGGGGTGTGTGTTTGAG+AGG | - | chr8_2:47017597-47017616 | None:intergenic | 50.0% | |
| TACACACTTAGAATCGCCCC+CGG | + | chr8_2:47017890-47017909 | Msa1251230:intron | 50.0% | |
| ! | ATGTAAAGGGGTAGCCTTGG+CGG | + | chr8_2:47018495-47018514 | Msa1251230:intron | 50.0% |
| CTAAAGCTCCTGCATACGCA+AGG | - | chr8_2:47018644-47018663 | None:intergenic | 50.0% | |
| ! | ATGCAGGAGCTTTAGTGCAC+CGG | + | chr8_2:47018649-47018668 | Msa1251230:intron | 50.0% |
| ! | GGGAGTGTATGATGCAGAGA+TGG | + | chr8_2:47018789-47018808 | Msa1251230:exon | 50.0% |
| ! | GTCTTGTTCAGATGCTCCCA+AGG | - | chr8_2:47018893-47018912 | None:intergenic | 50.0% |
| CGATAGTAGTACTGCCGTCT+CGG | - | chr8_2:47019132-47019151 | None:intergenic | 50.0% | |
| CGAGACGGCAGTACTACTAT+CGG | + | chr8_2:47019130-47019149 | Msa1251230:CDS | 50.0% | |
| ! | GGCTCTTATGTTAGTGGGCA+AGG | - | chr8_2:47020103-47020122 | None:intergenic | 50.0% |
| GTGTCTACTGCACTTTCCTG+TGG | - | chr8_2:47020614-47020633 | None:intergenic | 50.0% | |
| GGCTATAGGAGGAGAGACAA+AGG | - | chr8_2:47020842-47020861 | None:intergenic | 50.0% | |
| TGGTCCTGGAAGGATGAAAC+TGG | + | chr8_2:47021650-47021669 | Msa1251230:intron | 50.0% | |
| ! | CAAACTTCCACCTGCTGCTT+TGG | + | chr8_2:47021912-47021931 | Msa1251230:CDS | 50.0% |
| ACAGATGATGCCAAAGCAGC+AGG | - | chr8_2:47021925-47021944 | None:intergenic | 50.0% | |
| ! | ACCAGGAGTTTTACCCTCAG+CGG | - | chr8_2:47022225-47022244 | None:intergenic | 50.0% |
| !! | GTGGTGCTGACTCTGCTTTA+CGG | + | chr8_2:47022243-47022262 | Msa1251230:CDS | 50.0% |
| !! | TGCTGACTCTGCTTTACGGA+AGG | + | chr8_2:47022247-47022266 | Msa1251230:CDS | 50.0% |
| TTTACGGAAGGCAGAGGATG+TGG | + | chr8_2:47022259-47022278 | Msa1251230:CDS | 50.0% | |
| AAATCCCTTCGCAAGCATGC+TGG | - | chr8_2:47022288-47022307 | None:intergenic | 50.0% | |
| CCAGTTGAGTTCAACAGCCT+CGG | + | chr8_2:47022358-47022377 | Msa1251230:CDS | 50.0% | |
| GAACAGAAAGTCAGTACCGC+AGG | + | chr8_2:47022521-47022540 | Msa1251230:CDS | 50.0% | |
| ACTGGTACTACCTGGGTAAC+TGG | + | chr8_2:47022575-47022594 | Msa1251230:CDS | 50.0% | |
| AGTAAGGTTGCTAAGGCAGC+TGG | + | chr8_2:47022605-47022624 | Msa1251230:CDS | 50.0% | |
| GTAAGGTTGCTAAGGCAGCT+GGG | + | chr8_2:47022606-47022625 | Msa1251230:CDS | 50.0% | |
| TAAGGTTGCTAAGGCAGCTG+GGG | + | chr8_2:47022607-47022626 | Msa1251230:CDS | 50.0% | |
| AGTTGAAGACCAGTATGCGC+AGG | + | chr8_2:47022688-47022707 | Msa1251230:CDS | 50.0% | |
| !! | ACTTGTTGCTGCGGCTTTTG+GGG | - | chr8_2:47022726-47022745 | None:intergenic | 50.0% |
| !! | CACTTGTTGCTGCGGCTTTT+GGG | - | chr8_2:47022727-47022746 | None:intergenic | 50.0% |
| !! | TCACTTGTTGCTGCGGCTTT+TGG | - | chr8_2:47022728-47022747 | None:intergenic | 50.0% |
| ! | GTGCAGTTCACTTGTTGCTG+CGG | - | chr8_2:47022735-47022754 | None:intergenic | 50.0% |
| ATCAAACCCTGAGCAGGTGT+AGG | - | chr8_2:47022767-47022786 | None:intergenic | 50.0% | |
| CAAAGGATCAAACCCTGAGC+AGG | - | chr8_2:47022773-47022792 | None:intergenic | 50.0% | |
| TTCGACTATCGTCGTGGTGG+TGG | - | chr8_2:47017485-47017504 | None:intergenic | 55.0% | |
| GCTTTCGACTATCGTCGTGG+TGG | - | chr8_2:47017488-47017507 | None:intergenic | 55.0% | |
| CGTGCTTTCGACTATCGTCG+TGG | - | chr8_2:47017491-47017510 | None:intergenic | 55.0% | |
| ! | AGCGTAACGGCGTCGAAACT+GGG | - | chr8_2:47017613-47017632 | None:intergenic | 55.0% |
| ! | AAGCGTAACGGCGTCGAAAC+TGG | - | chr8_2:47017614-47017633 | None:intergenic | 55.0% |
| !! | CAACTTTACCGGTTCCGCCA+AGG | - | chr8_2:47018512-47018531 | None:intergenic | 55.0% |
| CATACGCAAGGTGCGGAAAG+GGG | - | chr8_2:47018632-47018651 | None:intergenic | 55.0% | |
| GCATACGCAAGGTGCGGAAA+GGG | - | chr8_2:47018633-47018652 | None:intergenic | 55.0% | |
| TGCATACGCAAGGTGCGGAA+AGG | - | chr8_2:47018634-47018653 | None:intergenic | 55.0% | |
| TTTCCGCACCTTGCGTATGC+AGG | + | chr8_2:47018633-47018652 | Msa1251230:intron | 55.0% | |
| ! | TGCAGGAGCTTTAGTGCACC+GGG | + | chr8_2:47018650-47018669 | Msa1251230:intron | 55.0% |
| CTCTGCATCATACACTCCCG+TGG | - | chr8_2:47018788-47018807 | None:intergenic | 55.0% | |
| ! | GCAGAGATGGGTTCTCCACA+AGG | + | chr8_2:47018802-47018821 | Msa1251230:exon | 55.0% |
| GGTCAGTGAGTTGCTGTGCT+TGG | + | chr8_2:47018965-47018984 | Msa1251230:intron | 55.0% | |
| AGGAGAGACAAAGGCCGAGA+AGG | - | chr8_2:47020833-47020852 | None:intergenic | 55.0% | |
| GCAGCCAGTTTCATCCTTCC+AGG | - | chr8_2:47021657-47021676 | None:intergenic | 55.0% | |
| GATGATGCCAAAGCAGCAGG+TGG | - | chr8_2:47021922-47021941 | None:intergenic | 55.0% | |
| GCTGAGGGTAAAACTCCTGG+TGG | + | chr8_2:47022224-47022243 | Msa1251230:CDS | 55.0% | |
| AAAGCAGAGTCAGCACCACC+AGG | - | chr8_2:47022242-47022261 | None:intergenic | 55.0% | |
| CTCTGCTTTACGGAAGGCAG+AGG | + | chr8_2:47022253-47022272 | Msa1251230:CDS | 55.0% | |
| GTCACCAGCATGCTTGCGAA+GGG | + | chr8_2:47022281-47022300 | Msa1251230:CDS | 55.0% | |
| CCGAGGCTGTTGAACTCAAC+TGG | - | chr8_2:47022361-47022380 | None:intergenic | 55.0% | |
| GCTGGTGCATCAGTTGTGAG+TGG | + | chr8_2:47022431-47022450 | Msa1251230:CDS | 55.0% | |
| CCAGTATGCGCAGGTCCTTT+CGG | + | chr8_2:47022697-47022716 | Msa1251230:CDS | 55.0% | |
| TTCCAAGCCTACACCTGCTC+AGG | + | chr8_2:47022757-47022776 | Msa1251230:CDS | 55.0% | |
| TCCAAGCCTACACCTGCTCA+GGG | + | chr8_2:47022758-47022777 | Msa1251230:CDS | 55.0% | |
| !! | GACTATCGTCGTGGTGGTGG+TGG | - | chr8_2:47017482-47017501 | None:intergenic | 60.0% |
| ! | GCGTAACGGCGTCGAAACTG+GGG | - | chr8_2:47017612-47017631 | None:intergenic | 60.0% |
| CGGAAAGGGGTCCCACCATT+TGG | - | chr8_2:47018619-47018638 | None:intergenic | 60.0% | |
| GCTCCTGCATACGCAAGGTG+CGG | - | chr8_2:47018639-47018658 | None:intergenic | 60.0% | |
| !! | GGATCCACAAGGTGCCGAGA+CGG | + | chr8_2:47019115-47019134 | Msa1251230:CDS | 60.0% |
| GCCGCTGAGGGTAAAACTCC+TGG | + | chr8_2:47022221-47022240 | Msa1251230:CDS | 60.0% | |
| GGTCACCAGCATGCTTGCGA+AGG | + | chr8_2:47022280-47022299 | Msa1251230:CDS | 60.0% | |
| GCTAAGGCAGCTGGGGATGT+AGG | + | chr8_2:47022614-47022633 | Msa1251230:CDS | 60.0% | |
| CCGAAAGGACCTGCGCATAC+TGG | - | chr8_2:47022700-47022719 | None:intergenic | 60.0% | |
| !! | CGGCTTTTGGGGACTCCGAA+AGG | - | chr8_2:47022715-47022734 | None:intergenic | 60.0% |
| ACCCTGAGCAGGTGTAGGCT+TGG | - | chr8_2:47022762-47022781 | None:intergenic | 60.0% | |
| ! | AGGGGTAGCCTTGGCGGAAC+CGG | + | chr8_2:47018501-47018520 | Msa1251230:intron | 65.0% |
| ACTGCCGTCTCGGCACCTTG+TGG | - | chr8_2:47019122-47019141 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 47017464 | 47023082 | 47017464 | ID=Msa1251230;Name=Msa1251230 |
| chr8_2 | mRNA | 47017464 | 47023082 | 47017464 | ID=Msa1251230-mRNA-1;Parent=Msa1251230;Name=Msa1251230-mRNA-1;_AED=0.07;_eAED=0.07;_QI=267|1|1|1|0.75|0.8|5|289|295 |
| chr8_2 | exon | 47017464 | 47017647 | 47017464 | ID=Msa1251230-mRNA-1:exon:14260;Parent=Msa1251230-mRNA-1 |
| chr8_2 | exon | 47018725 | 47018965 | 47018725 | ID=Msa1251230-mRNA-1:exon:14261;Parent=Msa1251230-mRNA-1 |
| chr8_2 | exon | 47019076 | 47019151 | 47019076 | ID=Msa1251230-mRNA-1:exon:14262;Parent=Msa1251230-mRNA-1 |
| chr8_2 | exon | 47021862 | 47021942 | 47021862 | ID=Msa1251230-mRNA-1:exon:14263;Parent=Msa1251230-mRNA-1 |
| chr8_2 | exon | 47022221 | 47023082 | 47022221 | ID=Msa1251230-mRNA-1:exon:14264;Parent=Msa1251230-mRNA-1 |
| chr8_2 | five_prime_UTR | 47017464 | 47017647 | 47017464 | ID=Msa1251230-mRNA-1:five_prime_utr;Parent=Msa1251230-mRNA-1 |
| chr8_2 | five_prime_UTR | 47018725 | 47018807 | 47018725 | ID=Msa1251230-mRNA-1:five_prime_utr;Parent=Msa1251230-mRNA-1 |
| chr8_2 | CDS | 47018808 | 47018965 | 47018808 | ID=Msa1251230-mRNA-1:cds;Parent=Msa1251230-mRNA-1 |
| chr8_2 | CDS | 47019076 | 47019151 | 47019076 | ID=Msa1251230-mRNA-1:cds;Parent=Msa1251230-mRNA-1 |
| chr8_2 | CDS | 47021862 | 47021942 | 47021862 | ID=Msa1251230-mRNA-1:cds;Parent=Msa1251230-mRNA-1 |
| chr8_2 | CDS | 47022221 | 47022793 | 47022221 | ID=Msa1251230-mRNA-1:cds;Parent=Msa1251230-mRNA-1 |
| chr8_2 | three_prime_UTR | 47022794 | 47023082 | 47022794 | ID=Msa1251230-mRNA-1:three_prime_utr;Parent=Msa1251230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
