AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0372100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0372100 MtrunA17_Chr4g0056381 69.412 85 26 0 295 379 103 187 1.76e-33 123
Msa0372100 MtrunA17_Chr1g0149481 46.970 132 55 4 249 379 47 164 1.03e-24 99.0
Msa0372100 MtrunA17_Chr1g0149471 51.163 86 40 2 295 379 126 210 5.38e-22 93.2
Msa0372100 MtrunA17_Chr1g0149491 55.556 81 34 2 300 379 72 151 1.06e-21 90.5
Msa0372100 MtrunA17_Chr4g0064361 62.222 90 34 0 290 379 144 233 7.02e-19 85.1
Msa0372100 MtrunA17_Chr4g0056411 48.810 84 34 4 300 378 89 168 2.93e-18 81.6
Msa0372100 MtrunA17_Chr3g0137521 49.412 85 34 4 300 379 50 130 2.09e-16 75.1
Msa0372100 MtrunA17_Chr4g0056371 45.882 85 44 2 296 379 49 132 6.79e-16 73.9
Msa0372100 MtrunA17_Chr2g0290521 45.161 93 46 4 287 378 38 126 7.45e-16 73.6
Msa0372100 MtrunA17_Chr4g0056391 47.619 84 37 4 300 379 63 143 7.51e-16 73.9
Msa0372100 MtrunA17_Chr4g0060391 43.689 103 53 3 278 379 25 123 1.05e-15 73.2
Msa0372100 MtrunA17_Chr4g0056401 46.914 81 42 1 300 379 54 134 4.29e-14 68.9
Msa0372100 MtrunA17_Chr5g0399081 39.080 87 51 2 293 378 91 176 9.08e-13 66.2
Msa0372100 MtrunA17_Chr5g0399091 37.778 90 48 3 293 378 84 169 1.38e-12 65.5
Msa0372100 MtrunA17_Chr3g0137531 48.148 81 41 1 300 379 49 129 1.56e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0372100 AT3G22142.1 45.812 382 136 17 35 380 1134 1480 4.31e-58 204
Msa0372100 AT4G15160.2 78.161 87 17 2 295 379 97 183 1.25e-38 137
Msa0372100 AT2G10940.2 49.231 260 117 8 125 378 39 289 3.52e-37 136
Msa0372100 AT2G10940.1 49.231 260 117 8 125 378 39 289 3.52e-37 136
Msa0372100 AT1G62500.1 72.619 84 23 0 296 379 211 294 3.91e-36 134
Msa0372100 AT4G12490.1 49.462 93 46 1 288 379 90 182 7.21e-25 100
Msa0372100 AT4G12470.1 53.659 82 37 1 299 379 80 161 4.72e-23 94.7
Msa0372100 AT4G12500.1 52.439 82 38 1 299 379 96 177 2.22e-22 93.6
Msa0372100 AT4G12480.1 53.659 82 37 1 299 379 87 168 2.34e-22 93.2
Msa0372100 AT1G62510.1 50.602 83 34 3 300 378 70 149 3.62e-18 81.3
Msa0372100 AT1G12100.1 48.235 85 43 1 296 379 48 132 3.66e-18 80.5
Msa0372100 AT2G45180.1 49.412 85 41 2 296 379 51 134 2.16e-17 78.6
Msa0372100 AT4G12520.1 48.837 86 33 3 300 379 49 129 1.12e-16 76.3
Msa0372100 AT4G12510.1 48.837 86 33 3 300 379 49 129 1.12e-16 76.3
Msa0372100 AT5G46890.1 45.263 95 43 5 288 379 39 127 1.36e-16 75.9
Msa0372100 AT5G46900.1 47.126 87 37 5 296 379 47 127 4.75e-16 74.3
Msa0372100 AT4G12530.1 46.591 88 45 2 293 379 30 116 1.16e-15 73.2
Msa0372100 AT1G12090.1 45.783 83 38 3 300 378 58 137 1.49e-14 70.5
Msa0372100 AT4G22460.1 40.000 115 55 4 272 377 22 131 3.24e-14 69.7
Msa0372100 AT4G00165.1 42.718 103 50 4 278 378 33 128 1.12e-13 67.8
Msa0372100 AT4G00165.2 42.718 103 50 4 278 378 33 128 1.12e-13 67.8
Msa0372100 AT4G12550.1 36.735 98 59 3 284 379 15 111 1.72e-12 63.9

Find 153 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTGGTGTGTTGGTGGTTT+AGG 0.101165 3_1:-70419089 None:intergenic
GGTGGTGTGTTGGTGGTTTA+GGG 0.179821 3_1:-70419088 None:intergenic
TTGGGATGATGAGGAGGTTT+TGG 0.213303 3_1:-70419251 None:intergenic
ACATGTGGTGGGTGCACTAC+TGG 0.227597 3_1:-70419278 None:intergenic
GTGTTGGTGGTTTAGGGCTT+GGG 0.277482 3_1:-70419082 None:intergenic
TTTGGAACATGTGGTGGTTT+TGG 0.297398 3_1:-70419233 None:intergenic
TGTGTTGGTGGTTTAGGGCT+TGG 0.305036 3_1:-70419083 None:intergenic
GGTTTAACAATTGGTGGTTT+TGG 0.308951 3_1:-70419332 None:intergenic
GGGCTTGGGTAAGGACAATA+AGG 0.310531 3_1:-70419068 None:intergenic
ACAATTGGTGGTTTCACAAT+TGG 0.325867 3_1:-70419656 None:intergenic
GGAACATAAGGTGGTGTTAC+AGG 0.335642 3_1:-70419467 None:intergenic
GGAACATAAGGTGGTGTTAC+AGG 0.335642 3_1:-70419539 None:intergenic
GGTCTCACAACAGGTGGCTT+AGG 0.336071 3_1:-70419416 None:intergenic
GGTGGACAAGGTGATGGTTT+AGG 0.339269 3_1:-70419197 None:intergenic
ACAATTGGTGGTTTCACAAT+TGG 0.349052 3_1:-70419569 None:intergenic
CATGTGGTGGGTGCACTACT+GGG 0.351022 3_1:-70419277 None:intergenic
TGCACATAAGGTGGTGTTAC+AGG 0.351554 3_1:-70419713 None:intergenic
GGCACATAAGGTGGATGTAC+TGG 0.360540 3_1:-70419311 None:intergenic
TGCATATATGATTAATAAGC+TGG 0.363723 3_1:-70420127 None:intergenic
TATGGTGGTGGTTTCACAAC+CGG 0.372564 3_1:-70419389 None:intergenic
GCTTCAAGGACTTGTTGATT+TGG 0.376763 3_1:+70419982 Msa0372100:CDS
TCCATTGATGCTTTGAAGTT+GGG 0.377397 3_1:+70419884 Msa0372100:CDS
GGTGTTGGTGGTGTTACAAT+AGG 0.381877 3_1:-70419743 None:intergenic
ACAGGGACAACTGGTGGTTT+AGG 0.382129 3_1:-70419449 None:intergenic
ACAGGGACAACTGGTGGTTT+AGG 0.382129 3_1:-70419521 None:intergenic
GGTTTGTGAACTGGTGGTTT+AGG 0.384230 3_1:-70419161 None:intergenic
GGTTTCACAATTGGTGGCTT+AGG 0.387848 3_1:-70419560 None:intergenic
TGAACTGGTGGCTTAACAAT+AGG 0.393111 3_1:-70419113 None:intergenic
GGTTTCACAATTGGAGGTGT+TGG 0.396026 3_1:-70419647 None:intergenic
GCTGGGCACTTAAACCCTTC+TGG 0.397405 3_1:-70420109 None:intergenic
GGTGGTGTTACAGGCACAAC+TGG 0.421124 3_1:-70419704 None:intergenic
ACTATTGGAGGTTTAACAAT+TGG 0.422358 3_1:-70419341 None:intergenic
TACTTTGGTGGTTTGTGAAC+TGG 0.426515 3_1:-70419128 None:intergenic
ACATGTTGTCCATTGCTTCA+AGG 0.426797 3_1:+70419968 Msa0372100:CDS
ATAGGTGGTGGTTGCACATA+AGG 0.432534 3_1:-70419725 None:intergenic
CTTCAGGTTCTCATTGATTG+TGG 0.435240 3_1:+70420076 Msa0372100:CDS
TATCTTGGTGGTTTGTGAAC+TGG 0.440214 3_1:-70419170 None:intergenic
GTTTCACAATTGGAGGTGTT+GGG 0.441037 3_1:-70419646 None:intergenic
TGAACTGGTGGTTTAGGAGT+AGG 0.443038 3_1:-70419155 None:intergenic
GGTGGTTTAGGGCTTGGGTA+AGG 0.443106 3_1:-70419077 None:intergenic
AAGAAGTTTAAGTCTAATAG+TGG 0.443363 3_1:-70420026 None:intergenic
ATGGAACATGTTTGTTGTGC+TGG 0.445283 3_1:-70419866 None:intergenic
TTCCATTGATGCTTTGAAGT+TGG 0.447409 3_1:+70419883 Msa0372100:CDS
ATTGGAGGTGTTGGGACATA+AGG 0.448232 3_1:-70419638 None:intergenic
ACCACTGGTGGTGTCACAAT+TGG 0.450406 3_1:-70419773 None:intergenic
GCACATAAGGTGGATGTACT+GGG 0.453867 3_1:-70419310 None:intergenic
GTTTGTTGTGCTGGTGGTGT+AGG 0.454264 3_1:-70419857 None:intergenic
GGTCTCACAACAGGTGGCTT+AGG 0.454580 3_1:-70419488 None:intergenic
GGTGGCGGTGATGGTACAAC+TGG 0.464332 3_1:-70419617 None:intergenic
ATGGTGGTGGTTTCACAACC+GGG 0.469584 3_1:-70419388 None:intergenic
ATTGGAGGTGTTGGTGTTGG+TGG 0.473389 3_1:-70419755 None:intergenic
ACGTAAGGTGGATGTACTAT+TGG 0.473876 3_1:-70419356 None:intergenic
GATGGTTTAGGAGGATATCT+TGG 0.475788 3_1:-70419185 None:intergenic
ACATAGGGTGGTCTCACAAC+AGG 0.482961 3_1:-70419425 None:intergenic
ACATAGGGTGGTCTCACAAC+AGG 0.482961 3_1:-70419497 None:intergenic
GGTGGTGTTACAGGGACAAC+TGG 0.483517 3_1:-70419458 None:intergenic
GGTGGTGTTACAGGGACAAC+TGG 0.483517 3_1:-70419530 None:intergenic
GTCTCACAACAGGTGGCTTA+GGG 0.489664 3_1:-70419415 None:intergenic
ATAGGAGGGTGGTGTGTTGG+TGG 0.491865 3_1:-70419095 None:intergenic
ATTGGTGGTTTCACAATTGG+TGG 0.495782 3_1:-70419566 None:intergenic
ATTGGTGGTTTCACAATTGG+AGG 0.496030 3_1:-70419653 None:intergenic
ATTGGAGGTTTAACAATTGG+TGG 0.498001 3_1:-70419338 None:intergenic
TTAGGAGTAGGAGAATACTT+TGG 0.499134 3_1:-70419143 None:intergenic
GGTGCATGTGTTGATGTGCT+TGG 0.500450 3_1:+70419905 Msa0372100:CDS
ACAGGTGGCTTAGGGACATA+TGG 0.500670 3_1:-70419407 None:intergenic
GCTGGTGGTGTAGGTGGATA+AGG 0.502339 3_1:-70419848 None:intergenic
GGTGTCACAATTGGAGGTGT+TGG 0.504887 3_1:-70419764 None:intergenic
GGTTTAGGAGGATATCTTGG+TGG 0.512387 3_1:-70419182 None:intergenic
GGATAAGGTACAAGTGGTGG+TGG 0.512801 3_1:-70419833 None:intergenic
CTTGGTGGACTCATACATAT+TGG 0.516064 3_1:+70419923 Msa0372100:CDS
ACATGTGGTGGGAAAACAAT+TGG 0.519270 3_1:-70419584 None:intergenic
ATTGGTGGCTTAGGAACATA+AGG 0.519504 3_1:-70419551 None:intergenic
ACAATTGGAGGTGTTGGTGT+TGG 0.522248 3_1:-70419758 None:intergenic
GGGACATAAGGTGGCGGTGA+TGG 0.523501 3_1:-70419626 None:intergenic
TGTTGTGCTGGTGGTGTAGG+TGG 0.526757 3_1:-70419854 None:intergenic
GGAGTAGGAGAATACTTTGG+TGG 0.529075 3_1:-70419140 None:intergenic
ACAGGTGGCTTAGGAACATA+AGG 0.531513 3_1:-70419479 None:intergenic
GGACAAGGTGATGGTTTAGG+AGG 0.532067 3_1:-70419194 None:intergenic
GGTGTTTCACTAGGTGGTGT+TGG 0.533247 3_1:-70419803 None:intergenic
GGCTTAGGGACATATGGTGG+TGG 0.534071 3_1:-70419401 None:intergenic
GGAGGACATGGTGTTTCACT+AGG 0.536488 3_1:-70419812 None:intergenic
ACAATAGGAGGGTGGTGTGT+TGG 0.537158 3_1:-70419098 None:intergenic
GCATGTGTTGATGTGCTTGG+TGG 0.537915 3_1:+70419908 Msa0372100:CDS
CTCATACATATTGGTATCGG+TGG 0.543738 3_1:+70419932 Msa0372100:CDS
GATGGTACAACTGGAGGTAG+TGG 0.546745 3_1:-70419608 None:intergenic
AACTGGTGGTTTAGGTACAT+AGG 0.546797 3_1:-70419441 None:intergenic
AACTGGTGGTTTAGGTACAT+AGG 0.546797 3_1:-70419513 None:intergenic
ATGTGGTGGGTGCACTACTG+GGG 0.548341 3_1:-70419276 None:intergenic
GCAAGCAAGAACATTGAGTA+AGG 0.548467 3_1:-70419045 None:intergenic
GGTGGTGTTACAATAGGTGG+TGG 0.552132 3_1:-70419737 None:intergenic
TAAGGTGGATGTACTATTGG+AGG 0.552788 3_1:-70419353 None:intergenic
ACAGGCACAACTGGAGGTAG+AGG 0.553941 3_1:-70419695 None:intergenic
ACAAGTGGTGGTGGAGGACA+TGG 0.555606 3_1:-70419824 None:intergenic
TAAGGTACAAGTGGTGGTGG+AGG 0.557029 3_1:-70419830 None:intergenic
TCAACAAGTCCTTGAAGCAA+TGG 0.557441 3_1:-70419977 None:intergenic
GGTGTTGGTGGTGTAACCAC+TGG 0.559606 3_1:-70419788 None:intergenic
GGAGGTGTTGGGACATAAGG+TGG 0.568088 3_1:-70419635 None:intergenic
CTTGGTGGTTTGTGAACTGG+TGG 0.569251 3_1:-70419167 None:intergenic
ACCTTACGTACCAAAACCCC+CGG 0.570737 3_1:+70419370 Msa0372100:CDS
CAATGAGAACCTGAAGAGCA+AGG 0.571048 3_1:-70420069 None:intergenic
GAACATGTTTGTTGTGCTGG+TGG 0.572842 3_1:-70419863 None:intergenic
GAACATAAGGTGGTGTTACA+GGG 0.574230 3_1:-70419466 None:intergenic
GAACATAAGGTGGTGTTACA+GGG 0.574230 3_1:-70419538 None:intergenic
TGGTGGTGGTTTCACAACCG+GGG 0.576934 3_1:-70419387 None:intergenic
GCATATATGATTAATAAGCT+GGG 0.577240 3_1:-70420126 None:intergenic
TGTGGTGGGTGCACTACTGG+GGG 0.578476 3_1:-70419275 None:intergenic
GTTGGTGGTGTTACAATAGG+TGG 0.578628 3_1:-70419740 None:intergenic
ACTGGTGGCTTAACAATAGG+AGG 0.579565 3_1:-70419110 None:intergenic
ACCCAACTTCAAAGCATCAA+TGG 0.579869 3_1:-70419885 None:intergenic
AGGTACTCAAGTTCAAGAGA+AGG 0.579976 3_1:-70419025 None:intergenic
GTTTCACTAGGTGGTGTTGG+TGG 0.580655 3_1:-70419800 None:intergenic
TTTGGTGGTTTGTGAACTGG+TGG 0.584308 3_1:-70419125 None:intergenic
CAAGAGAAGGATGAAAACAT+TGG 0.585017 3_1:-70419012 None:intergenic
AATGAGAACCTGAAGAGCAA+GGG 0.587112 3_1:-70420068 None:intergenic
GGAGGTAGTGGAACATGTGG+TGG 0.588460 3_1:-70419596 None:intergenic
GGACTCATACATATTGGTAT+CGG 0.594117 3_1:+70419929 Msa0372100:CDS
TGTGGCAAAACTCCACCAGA+AGG 0.594689 3_1:+70420094 Msa0372100:CDS
CACATAAGGTGGATGTACTG+GGG 0.597608 3_1:-70419309 None:intergenic
ACTGGTGGTTTAGGTACATA+GGG 0.604382 3_1:-70419440 None:intergenic
ACTGGTGGTTTAGGTACATA+GGG 0.604382 3_1:-70419512 None:intergenic
ACTGGTGGTGTCACAATTGG+AGG 0.619027 3_1:-70419770 None:intergenic
GGAGGTAGAGGAACATGTGG+TGG 0.622203 3_1:-70419683 None:intergenic
ATGAGAACCTGAAGAGCAAG+GGG 0.626266 3_1:-70420067 None:intergenic
TGTGGTGGGAAAACAATTGG+TGG 0.626847 3_1:-70419581 None:intergenic
GGCTTGGGTAAGGACAATAA+GGG 0.629172 3_1:-70419067 None:intergenic
GAGGTAGTGGAACATGTGGT+GGG 0.631936 3_1:-70419595 None:intergenic
GTGGCAAAACTCCACCAGAA+GGG 0.633657 3_1:+70420095 Msa0372100:CDS
GTAGGTGGATAAGGTACAAG+TGG 0.636320 3_1:-70419839 None:intergenic
TCCAATTGTGACACCACCAG+TGG 0.639965 3_1:+70419772 Msa0372100:CDS
GGGCACTTAAACCCTTCTGG+TGG 0.641808 3_1:-70420106 None:intergenic
GGTGTTACAGGGACAACTGG+TGG 0.641906 3_1:-70419455 None:intergenic
GGTGTTACAGGGACAACTGG+TGG 0.641906 3_1:-70419527 None:intergenic
GGCGGTGATGGTACAACTGG+AGG 0.645853 3_1:-70419614 None:intergenic
GGTGGATAAGGTACAAGTGG+TGG 0.651301 3_1:-70419836 None:intergenic
GGTGTTGGGACATAAGGTGG+CGG 0.673173 3_1:-70419632 None:intergenic
CTGGTGGCTTAACAATAGGA+GGG 0.675325 3_1:-70419109 None:intergenic
GGTGGTGGTTGCACATAAGG+TGG 0.679674 3_1:-70419722 None:intergenic
GGACATGGTGTTTCACTAGG+TGG 0.681972 3_1:-70419809 None:intergenic
TAGGGTGGTCTCACAACAGG+TGG 0.682111 3_1:-70419422 None:intergenic
TAGGGTGGTCTCACAACAGG+TGG 0.682111 3_1:-70419494 None:intergenic
GGTGTTACAGGCACAACTGG+AGG 0.684392 3_1:-70419701 None:intergenic
GGTGGTGGTTTCACAACCGG+GGG 0.687563 3_1:-70419386 None:intergenic
ACATAAGGTGGATGTACTGG+GGG 0.689428 3_1:-70419308 None:intergenic
GGTGGCTTAGGGACATATGG+TGG 0.693700 3_1:-70419404 None:intergenic
GGTGGCTTAGGAACATAAGG+TGG 0.699096 3_1:-70419548 None:intergenic
ACTGGAGGTAGAGGAACATG+TGG 0.699937 3_1:-70419686 None:intergenic
GTTGGTGGTGTAACCACTGG+TGG 0.706491 3_1:-70419785 None:intergenic
GGTGGCTTAGGAACATAAGG+TGG 0.709677 3_1:-70419476 None:intergenic
GTGGCTTAACAATAGGAGGG+TGG 0.714929 3_1:-70419106 None:intergenic
GGTGGTTTAGGTACATAGGG+TGG 0.730445 3_1:-70419437 None:intergenic
GGTGGTTTAGGTACATAGGG+TGG 0.730445 3_1:-70419509 None:intergenic
ACTGGAGGTAGTGGAACATG+TGG 0.746997 3_1:-70419599 None:intergenic
TGAGAACCTGAAGAGCAAGG+GGG 0.789043 3_1:-70420066 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGAAGTTTAAGTCTAATAG+TGG - chr3_1:70420029-70420048 None:intergenic 25.0%
! AAGAAGTTTAAGTCTAATAG+TGG - chr3_1:70420029-70420048 None:intergenic 25.0%
ACTATTGGAGGTTTAACAAT+TGG - chr3_1:70419344-70419363 None:intergenic 30.0%
ACTATTGGAGGTTTAACAAT+TGG - chr3_1:70419344-70419363 None:intergenic 30.0%
CAAGAGAAGGATGAAAACAT+TGG - chr3_1:70419015-70419034 None:intergenic 35.0%
TTAGGAGTAGGAGAATACTT+TGG - chr3_1:70419146-70419165 None:intergenic 35.0%
!! GGTTTAACAATTGGTGGTTT+TGG - chr3_1:70419335-70419354 None:intergenic 35.0%
ATTGGAGGTTTAACAATTGG+TGG - chr3_1:70419341-70419360 None:intergenic 35.0%
! ACAATTGGTGGTTTCACAAT+TGG - chr3_1:70419572-70419591 None:intergenic 35.0%
! ACAATTGGTGGTTTCACAAT+TGG - chr3_1:70419572-70419591 None:intergenic 35.0%
! ACATGTGGTGGAAAAACAAT+TGG - chr3_1:70419674-70419693 None:intergenic 35.0%
!! TTCCATTGATGCTTTGAAGT+TGG + chr3_1:70419883-70419902 Msa0372100:CDS 35.0%
!! TCCATTGATGCTTTGAAGTT+GGG + chr3_1:70419884-70419903 Msa0372100:CDS 35.0%
GGACTCATACATATTGGTAT+CGG + chr3_1:70419929-70419948 Msa0372100:CDS 35.0%
CAAGAGAAGGATGAAAACAT+TGG - chr3_1:70419015-70419034 None:intergenic 35.0%
TTAGGAGTAGGAGAATACTT+TGG - chr3_1:70419146-70419165 None:intergenic 35.0%
!! GGTTTAACAATTGGTGGTTT+TGG - chr3_1:70419335-70419354 None:intergenic 35.0%
ATTGGAGGTTTAACAATTGG+TGG - chr3_1:70419341-70419360 None:intergenic 35.0%
! ACAATTGGTGGTTTCACAAT+TGG - chr3_1:70419572-70419591 None:intergenic 35.0%
! ACAATTGGTGGTTTCACAAT+TGG - chr3_1:70419572-70419591 None:intergenic 35.0%
! ACATGTGGTGGAAAAACAAT+TGG - chr3_1:70419674-70419693 None:intergenic 35.0%
!! TTCCATTGATGCTTTGAAGT+TGG + chr3_1:70419883-70419902 Msa0372100:CDS 35.0%
!! TCCATTGATGCTTTGAAGTT+GGG + chr3_1:70419884-70419903 Msa0372100:CDS 35.0%
GGACTCATACATATTGGTAT+CGG + chr3_1:70419929-70419948 Msa0372100:CDS 35.0%
AGGTACTCAAGTTCAAGAGA+AGG - chr3_1:70419028-70419047 None:intergenic 40.0%
GCAAGCAAGAACATTGAGTA+AGG - chr3_1:70419048-70419067 None:intergenic 40.0%
TGAACTGGTGGCTTAACAAT+AGG - chr3_1:70419116-70419135 None:intergenic 40.0%
! TACTTTGGTGGTTTGTGAAC+TGG - chr3_1:70419131-70419150 None:intergenic 40.0%
! TATCTTGGTGGTTTGTGAAC+TGG - chr3_1:70419173-70419192 None:intergenic 40.0%
GATGGTTTAGGAGGATATCT+TGG - chr3_1:70419188-70419207 None:intergenic 40.0%
!!! TGGTTTTGGTGTTGATGATG+GGG - chr3_1:70419222-70419241 None:intergenic 40.0%
!!! GTGGTTTTGGTGTTGATGAT+GGG - chr3_1:70419223-70419242 None:intergenic 40.0%
!! TTTGGAACATGTGGTGGTTT+TGG - chr3_1:70419236-70419255 None:intergenic 40.0%
!!! ATTGGTGGTTTTGGCACATA+AGG - chr3_1:70419326-70419345 None:intergenic 40.0%
TAAGGTGGATGTACTATTGG+AGG - chr3_1:70419356-70419375 None:intergenic 40.0%
ACGTAAGGTGGATGTACTAT+TGG - chr3_1:70419359-70419378 None:intergenic 40.0%
ACTGGTGGTTTAGGTACATA+GGG - chr3_1:70419443-70419462 None:intergenic 40.0%
AACTGGTGGTTTAGGTACAT+AGG - chr3_1:70419444-70419463 None:intergenic 40.0%
!! GAACATAAGGTGGTGTTACA+GGG - chr3_1:70419469-70419488 None:intergenic 40.0%
ACTGGTGGTTTAGGTACATA+GGG - chr3_1:70419443-70419462 None:intergenic 40.0%
AACTGGTGGTTTAGGTACAT+AGG - chr3_1:70419444-70419463 None:intergenic 40.0%
!! GAACATAAGGTGGTGTTACA+GGG - chr3_1:70419469-70419488 None:intergenic 40.0%
! ATTGGTGGCTTAGGAACATA+AGG - chr3_1:70419554-70419573 None:intergenic 40.0%
! ATTGGTGGTTTCACAATTGG+TGG - chr3_1:70419569-70419588 None:intergenic 40.0%
! ACATGTGGTGGGAAAACAAT+TGG - chr3_1:70419587-70419606 None:intergenic 40.0%
!! GTTTCACAATTGGAGGTGTT+GGG - chr3_1:70419649-70419668 None:intergenic 40.0%
! ATTGGTGGTTTCACAATTGG+AGG - chr3_1:70419569-70419588 None:intergenic 40.0%
! TGTGGTGGAAAAACAATTGG+TGG - chr3_1:70419671-70419690 None:intergenic 40.0%
!! ATGGAACATGTTTGTTGTGC+TGG - chr3_1:70419869-70419888 None:intergenic 40.0%
! ACCCAACTTCAAAGCATCAA+TGG - chr3_1:70419888-70419907 None:intergenic 40.0%
!! CTTGGTGGACTCATACATAT+TGG + chr3_1:70419923-70419942 Msa0372100:CDS 40.0%
! CTCATACATATTGGTATCGG+TGG + chr3_1:70419932-70419951 Msa0372100:CDS 40.0%
ACATGTTGTCCATTGCTTCA+AGG + chr3_1:70419968-70419987 Msa0372100:CDS 40.0%
TCAACAAGTCCTTGAAGCAA+TGG - chr3_1:70419980-70419999 None:intergenic 40.0%
!! GCTTCAAGGACTTGTTGATT+TGG + chr3_1:70419982-70420001 Msa0372100:CDS 40.0%
AATGAGAACCTGAAGAGCAA+GGG - chr3_1:70420071-70420090 None:intergenic 40.0%
! CTTCAGGTTCTCATTGATTG+TGG + chr3_1:70420076-70420095 Msa0372100:CDS 40.0%
AGGTACTCAAGTTCAAGAGA+AGG - chr3_1:70419028-70419047 None:intergenic 40.0%
GCAAGCAAGAACATTGAGTA+AGG - chr3_1:70419048-70419067 None:intergenic 40.0%
TGAACTGGTGGCTTAACAAT+AGG - chr3_1:70419116-70419135 None:intergenic 40.0%
! TACTTTGGTGGTTTGTGAAC+TGG - chr3_1:70419131-70419150 None:intergenic 40.0%
! TATCTTGGTGGTTTGTGAAC+TGG - chr3_1:70419173-70419192 None:intergenic 40.0%
GATGGTTTAGGAGGATATCT+TGG - chr3_1:70419188-70419207 None:intergenic 40.0%
!!! TGGTTTTGGTGTTGATGATG+GGG - chr3_1:70419222-70419241 None:intergenic 40.0%
!!! GTGGTTTTGGTGTTGATGAT+GGG - chr3_1:70419223-70419242 None:intergenic 40.0%
!! TTTGGAACATGTGGTGGTTT+TGG - chr3_1:70419236-70419255 None:intergenic 40.0%
!!! ATTGGTGGTTTTGGCACATA+AGG - chr3_1:70419326-70419345 None:intergenic 40.0%
TAAGGTGGATGTACTATTGG+AGG - chr3_1:70419356-70419375 None:intergenic 40.0%
ACGTAAGGTGGATGTACTAT+TGG - chr3_1:70419359-70419378 None:intergenic 40.0%
ACTGGTGGTTTAGGTACATA+GGG - chr3_1:70419443-70419462 None:intergenic 40.0%
AACTGGTGGTTTAGGTACAT+AGG - chr3_1:70419444-70419463 None:intergenic 40.0%
!! GAACATAAGGTGGTGTTACA+GGG - chr3_1:70419469-70419488 None:intergenic 40.0%
ACTGGTGGTTTAGGTACATA+GGG - chr3_1:70419443-70419462 None:intergenic 40.0%
AACTGGTGGTTTAGGTACAT+AGG - chr3_1:70419444-70419463 None:intergenic 40.0%
!! GAACATAAGGTGGTGTTACA+GGG - chr3_1:70419469-70419488 None:intergenic 40.0%
! ATTGGTGGCTTAGGAACATA+AGG - chr3_1:70419554-70419573 None:intergenic 40.0%
! ATTGGTGGTTTCACAATTGG+TGG - chr3_1:70419569-70419588 None:intergenic 40.0%
! ACATGTGGTGGGAAAACAAT+TGG - chr3_1:70419587-70419606 None:intergenic 40.0%
!! GTTTCACAATTGGAGGTGTT+GGG - chr3_1:70419649-70419668 None:intergenic 40.0%
! ATTGGTGGTTTCACAATTGG+AGG - chr3_1:70419569-70419588 None:intergenic 40.0%
! TGTGGTGGAAAAACAATTGG+TGG - chr3_1:70419671-70419690 None:intergenic 40.0%
!! ATGGAACATGTTTGTTGTGC+TGG - chr3_1:70419869-70419888 None:intergenic 40.0%
! ACCCAACTTCAAAGCATCAA+TGG - chr3_1:70419888-70419907 None:intergenic 40.0%
!! CTTGGTGGACTCATACATAT+TGG + chr3_1:70419923-70419942 Msa0372100:CDS 40.0%
! CTCATACATATTGGTATCGG+TGG + chr3_1:70419932-70419951 Msa0372100:CDS 40.0%
ACATGTTGTCCATTGCTTCA+AGG + chr3_1:70419968-70419987 Msa0372100:CDS 40.0%
TCAACAAGTCCTTGAAGCAA+TGG - chr3_1:70419980-70419999 None:intergenic 40.0%
!! GCTTCAAGGACTTGTTGATT+TGG + chr3_1:70419982-70420001 Msa0372100:CDS 40.0%
AATGAGAACCTGAAGAGCAA+GGG - chr3_1:70420071-70420090 None:intergenic 40.0%
! CTTCAGGTTCTCATTGATTG+TGG + chr3_1:70420076-70420095 Msa0372100:CDS 40.0%
GGCTTGGGTAAGGACAATAA+GGG - chr3_1:70419070-70419089 None:intergenic 45.0%
CTGGTGGCTTAACAATAGGA+GGG - chr3_1:70419112-70419131 None:intergenic 45.0%
ACTGGTGGCTTAACAATAGG+AGG - chr3_1:70419113-70419132 None:intergenic 45.0%
! TTTGGTGGTTTGTGAACTGG+TGG - chr3_1:70419128-70419147 None:intergenic 45.0%
GGAGTAGGAGAATACTTTGG+TGG - chr3_1:70419143-70419162 None:intergenic 45.0%
TGAACTGGTGGTTTAGGAGT+AGG - chr3_1:70419158-70419177 None:intergenic 45.0%
GGTTTGTGAACTGGTGGTTT+AGG - chr3_1:70419164-70419183 None:intergenic 45.0%
GGTTTAGGAGGATATCTTGG+TGG - chr3_1:70419185-70419204 None:intergenic 45.0%
!!! GGTTTTGGTGTTGATGATGG+GGG - chr3_1:70419221-70419240 None:intergenic 45.0%
!!! GGTGGTTTTGGTGTTGATGA+TGG - chr3_1:70419224-70419243 None:intergenic 45.0%
!!! TGAGGAGGTTTTGGAACATG+TGG - chr3_1:70419245-70419264 None:intergenic 45.0%
! TTGGGATGATGAGGAGGTTT+TGG - chr3_1:70419254-70419273 None:intergenic 45.0%
ACATAAGGTGGATGTACTGG+GGG - chr3_1:70419311-70419330 None:intergenic 45.0%
CACATAAGGTGGATGTACTG+GGG - chr3_1:70419312-70419331 None:intergenic 45.0%
GCACATAAGGTGGATGTACT+GGG - chr3_1:70419313-70419332 None:intergenic 45.0%
!! TATGGTGGTGGTTTCACAAC+CGG - chr3_1:70419392-70419411 None:intergenic 45.0%
!! GGAACATAAGGTGGTGTTAC+AGG - chr3_1:70419470-70419489 None:intergenic 45.0%
ACAGGTGGCTTAGGAACATA+AGG - chr3_1:70419482-70419501 None:intergenic 45.0%
!! GGAACATAAGGTGGTGTTAC+AGG - chr3_1:70419470-70419489 None:intergenic 45.0%
! GGTTTCACAATTGGTGGCTT+AGG - chr3_1:70419563-70419582 None:intergenic 45.0%
! TGTGGTGGGAAAACAATTGG+TGG - chr3_1:70419584-70419603 None:intergenic 45.0%
!! ATTGGAGGTGTTGGGACATA+AGG - chr3_1:70419641-70419660 None:intergenic 45.0%
! GGTTTCACAATTGGAGGTGT+TGG - chr3_1:70419650-70419669 None:intergenic 45.0%
!! TGCACATAAGGTGGTGTTAC+AGG - chr3_1:70419716-70419735 None:intergenic 45.0%
! ATAGGTGGTGGTTGCACATA+AGG - chr3_1:70419728-70419747 None:intergenic 45.0%
!! GTTGGTGGTGTTACAATAGG+TGG - chr3_1:70419743-70419762 None:intergenic 45.0%
!! GGTGTTGGTGGTGTTACAAT+AGG - chr3_1:70419746-70419765 None:intergenic 45.0%
!! ACAATTGGAGGTGTTGGTGT+TGG - chr3_1:70419761-70419780 None:intergenic 45.0%
GTAGGTGGATAAGGTACAAG+TGG - chr3_1:70419842-70419861 None:intergenic 45.0%
!! GAACATGTTTGTTGTGCTGG+TGG - chr3_1:70419866-70419885 None:intergenic 45.0%
ATGAGAACCTGAAGAGCAAG+GGG - chr3_1:70420070-70420089 None:intergenic 45.0%
CAATGAGAACCTGAAGAGCA+AGG - chr3_1:70420072-70420091 None:intergenic 45.0%
GGCTTGGGTAAGGACAATAA+GGG - chr3_1:70419070-70419089 None:intergenic 45.0%
CTGGTGGCTTAACAATAGGA+GGG - chr3_1:70419112-70419131 None:intergenic 45.0%
ACTGGTGGCTTAACAATAGG+AGG - chr3_1:70419113-70419132 None:intergenic 45.0%
! TTTGGTGGTTTGTGAACTGG+TGG - chr3_1:70419128-70419147 None:intergenic 45.0%
GGAGTAGGAGAATACTTTGG+TGG - chr3_1:70419143-70419162 None:intergenic 45.0%
TGAACTGGTGGTTTAGGAGT+AGG - chr3_1:70419158-70419177 None:intergenic 45.0%
GGTTTGTGAACTGGTGGTTT+AGG - chr3_1:70419164-70419183 None:intergenic 45.0%
GGTTTAGGAGGATATCTTGG+TGG - chr3_1:70419185-70419204 None:intergenic 45.0%
!!! GGTTTTGGTGTTGATGATGG+GGG - chr3_1:70419221-70419240 None:intergenic 45.0%
!!! GGTGGTTTTGGTGTTGATGA+TGG - chr3_1:70419224-70419243 None:intergenic 45.0%
!!! TGAGGAGGTTTTGGAACATG+TGG - chr3_1:70419245-70419264 None:intergenic 45.0%
! TTGGGATGATGAGGAGGTTT+TGG - chr3_1:70419254-70419273 None:intergenic 45.0%
ACATAAGGTGGATGTACTGG+GGG - chr3_1:70419311-70419330 None:intergenic 45.0%
CACATAAGGTGGATGTACTG+GGG - chr3_1:70419312-70419331 None:intergenic 45.0%
GCACATAAGGTGGATGTACT+GGG - chr3_1:70419313-70419332 None:intergenic 45.0%
!! TATGGTGGTGGTTTCACAAC+CGG - chr3_1:70419392-70419411 None:intergenic 45.0%
!! GGAACATAAGGTGGTGTTAC+AGG - chr3_1:70419470-70419489 None:intergenic 45.0%
ACAGGTGGCTTAGGAACATA+AGG - chr3_1:70419482-70419501 None:intergenic 45.0%
!! GGAACATAAGGTGGTGTTAC+AGG - chr3_1:70419470-70419489 None:intergenic 45.0%
! GGTTTCACAATTGGTGGCTT+AGG - chr3_1:70419563-70419582 None:intergenic 45.0%
! TGTGGTGGGAAAACAATTGG+TGG - chr3_1:70419584-70419603 None:intergenic 45.0%
!! ATTGGAGGTGTTGGGACATA+AGG - chr3_1:70419641-70419660 None:intergenic 45.0%
! GGTTTCACAATTGGAGGTGT+TGG - chr3_1:70419650-70419669 None:intergenic 45.0%
!! TGCACATAAGGTGGTGTTAC+AGG - chr3_1:70419716-70419735 None:intergenic 45.0%
! ATAGGTGGTGGTTGCACATA+AGG - chr3_1:70419728-70419747 None:intergenic 45.0%
!! GTTGGTGGTGTTACAATAGG+TGG - chr3_1:70419743-70419762 None:intergenic 45.0%
!! GGTGTTGGTGGTGTTACAAT+AGG - chr3_1:70419746-70419765 None:intergenic 45.0%
!! ACAATTGGAGGTGTTGGTGT+TGG - chr3_1:70419761-70419780 None:intergenic 45.0%
GTAGGTGGATAAGGTACAAG+TGG - chr3_1:70419842-70419861 None:intergenic 45.0%
!! GAACATGTTTGTTGTGCTGG+TGG - chr3_1:70419866-70419885 None:intergenic 45.0%
ATGAGAACCTGAAGAGCAAG+GGG - chr3_1:70420070-70420089 None:intergenic 45.0%
CAATGAGAACCTGAAGAGCA+AGG - chr3_1:70420072-70420091 None:intergenic 45.0%
GGGCTTGGGTAAGGACAATA+AGG - chr3_1:70419071-70419090 None:intergenic 50.0%
!! GTGTTGGTGGTTTAGGGCTT+GGG - chr3_1:70419085-70419104 None:intergenic 50.0%
!! TGTGTTGGTGGTTTAGGGCT+TGG - chr3_1:70419086-70419105 None:intergenic 50.0%
!! GGTGGTGTGTTGGTGGTTTA+GGG - chr3_1:70419091-70419110 None:intergenic 50.0%
ACAATAGGAGGGTGGTGTGT+TGG - chr3_1:70419101-70419120 None:intergenic 50.0%
GTGGCTTAACAATAGGAGGG+TGG - chr3_1:70419109-70419128 None:intergenic 50.0%
! CTTGGTGGTTTGTGAACTGG+TGG - chr3_1:70419170-70419189 None:intergenic 50.0%
! GGACAAGGTGATGGTTTAGG+AGG - chr3_1:70419197-70419216 None:intergenic 50.0%
! GGTGGACAAGGTGATGGTTT+AGG - chr3_1:70419200-70419219 None:intergenic 50.0%
!! TTTGGTGTTGATGATGGGGG+TGG - chr3_1:70419218-70419237 None:intergenic 50.0%
!!! GGAGGTTTTGGAACATGTGG+TGG - chr3_1:70419242-70419261 None:intergenic 50.0%
!!! GGGGTTTTGGAACATGTGGT+GGG - chr3_1:70419292-70419311 None:intergenic 50.0%
!!! ACTGGGGGTTTTGGAACATG+TGG - chr3_1:70419296-70419315 None:intergenic 50.0%
GGCACATAAGGTGGATGTAC+TGG - chr3_1:70419314-70419333 None:intergenic 50.0%
!!! GGTGGTTTTGGCACATAAGG+TGG - chr3_1:70419323-70419342 None:intergenic 50.0%
ACCTTACGTACCAAAACCCC+CGG + chr3_1:70419370-70419389 Msa0372100:CDS 50.0%
!! ATGGTGGTGGTTTCACAACC+GGG - chr3_1:70419391-70419410 None:intergenic 50.0%
ACAGGTGGCTTAGGGACATA+TGG - chr3_1:70419410-70419429 None:intergenic 50.0%
GTCTCACAACAGGTGGCTTA+GGG - chr3_1:70419418-70419437 None:intergenic 50.0%
ACATAGGGTGGTCTCACAAC+AGG - chr3_1:70419428-70419447 None:intergenic 50.0%
GGTGGTTTAGGTACATAGGG+TGG - chr3_1:70419440-70419459 None:intergenic 50.0%
ACAGGGACAACTGGTGGTTT+AGG - chr3_1:70419452-70419471 None:intergenic 50.0%
GGTGGCTTAGGAACATAAGG+TGG - chr3_1:70419479-70419498 None:intergenic 50.0%
ACATAGGGTGGTCTCACAAC+AGG - chr3_1:70419428-70419447 None:intergenic 50.0%
GGTGGTTTAGGTACATAGGG+TGG - chr3_1:70419440-70419459 None:intergenic 50.0%
ACAGGGACAACTGGTGGTTT+AGG - chr3_1:70419452-70419471 None:intergenic 50.0%
GGTGGCTTAGGAACATAAGG+TGG - chr3_1:70419479-70419498 None:intergenic 50.0%
!! GAGGTAGTGGAACATGTGGT+GGG - chr3_1:70419598-70419617 None:intergenic 50.0%
!! ACTGGAGGTAGTGGAACATG+TGG - chr3_1:70419602-70419621 None:intergenic 50.0%
GATGGTACAACTGGAGGTAG+TGG - chr3_1:70419611-70419630 None:intergenic 50.0%
ACTGGAGGTAGAGGAACATG+TGG - chr3_1:70419689-70419708 None:intergenic 50.0%
!! GGTGGTGTTACAATAGGTGG+TGG - chr3_1:70419740-70419759 None:intergenic 50.0%
!! ATTGGAGGTGTTGGTGTTGG+TGG - chr3_1:70419758-70419777 None:intergenic 50.0%
! GGTGTCACAATTGGAGGTGT+TGG - chr3_1:70419767-70419786 None:intergenic 50.0%
!! ACTGGTGGTGTCACAATTGG+AGG - chr3_1:70419773-70419792 None:intergenic 50.0%
TCCAATTGTGACACCACCAG+TGG + chr3_1:70419772-70419791 Msa0372100:CDS 50.0%
!! ACCACTGGTGGTGTCACAAT+TGG - chr3_1:70419776-70419795 None:intergenic 50.0%
! GTTTCACTAGGTGGTGTTGG+TGG - chr3_1:70419803-70419822 None:intergenic 50.0%
GGTGTTTCACTAGGTGGTGT+TGG - chr3_1:70419806-70419825 None:intergenic 50.0%
GGACATGGTGTTTCACTAGG+TGG - chr3_1:70419812-70419831 None:intergenic 50.0%
GGAGGACATGGTGTTTCACT+AGG - chr3_1:70419815-70419834 None:intergenic 50.0%
!! TAAGGTACAAGTGGTGGTGG+AGG - chr3_1:70419833-70419852 None:intergenic 50.0%
GGATAAGGTACAAGTGGTGG+TGG - chr3_1:70419836-70419855 None:intergenic 50.0%
GGTGGATAAGGTACAAGTGG+TGG - chr3_1:70419839-70419858 None:intergenic 50.0%
!! GTTTGTTGTGCTGGTGGTGT+AGG - chr3_1:70419860-70419879 None:intergenic 50.0%
! GGTGCATGTGTTGATGTGCT+TGG + chr3_1:70419905-70419924 Msa0372100:CDS 50.0%
! GCATGTGTTGATGTGCTTGG+TGG + chr3_1:70419908-70419927 Msa0372100:CDS 50.0%
TGTTATCCCCCTTGCTCTTC+AGG + chr3_1:70420060-70420079 Msa0372100:CDS 50.0%
TGAGAACCTGAAGAGCAAGG+GGG - chr3_1:70420069-70420088 None:intergenic 50.0%
TGTGGCAAAACTCCACCAGA+AGG + chr3_1:70420094-70420113 Msa0372100:CDS 50.0%
GTGGCAAAACTCCACCAGAA+GGG + chr3_1:70420095-70420114 Msa0372100:CDS 50.0%
GGGCTTGGGTAAGGACAATA+AGG - chr3_1:70419071-70419090 None:intergenic 50.0%
!! GTGTTGGTGGTTTAGGGCTT+GGG - chr3_1:70419085-70419104 None:intergenic 50.0%
!! TGTGTTGGTGGTTTAGGGCT+TGG - chr3_1:70419086-70419105 None:intergenic 50.0%
!! GGTGGTGTGTTGGTGGTTTA+GGG - chr3_1:70419091-70419110 None:intergenic 50.0%
ACAATAGGAGGGTGGTGTGT+TGG - chr3_1:70419101-70419120 None:intergenic 50.0%
GTGGCTTAACAATAGGAGGG+TGG - chr3_1:70419109-70419128 None:intergenic 50.0%
! CTTGGTGGTTTGTGAACTGG+TGG - chr3_1:70419170-70419189 None:intergenic 50.0%
! GGACAAGGTGATGGTTTAGG+AGG - chr3_1:70419197-70419216 None:intergenic 50.0%
! GGTGGACAAGGTGATGGTTT+AGG - chr3_1:70419200-70419219 None:intergenic 50.0%
!! TTTGGTGTTGATGATGGGGG+TGG - chr3_1:70419218-70419237 None:intergenic 50.0%
!!! GGAGGTTTTGGAACATGTGG+TGG - chr3_1:70419242-70419261 None:intergenic 50.0%
!!! GGGGTTTTGGAACATGTGGT+GGG - chr3_1:70419292-70419311 None:intergenic 50.0%
!!! ACTGGGGGTTTTGGAACATG+TGG - chr3_1:70419296-70419315 None:intergenic 50.0%
GGCACATAAGGTGGATGTAC+TGG - chr3_1:70419314-70419333 None:intergenic 50.0%
!!! GGTGGTTTTGGCACATAAGG+TGG - chr3_1:70419323-70419342 None:intergenic 50.0%
ACCTTACGTACCAAAACCCC+CGG + chr3_1:70419370-70419389 Msa0372100:CDS 50.0%
!! ATGGTGGTGGTTTCACAACC+GGG - chr3_1:70419391-70419410 None:intergenic 50.0%
ACAGGTGGCTTAGGGACATA+TGG - chr3_1:70419410-70419429 None:intergenic 50.0%
GTCTCACAACAGGTGGCTTA+GGG - chr3_1:70419418-70419437 None:intergenic 50.0%
ACATAGGGTGGTCTCACAAC+AGG - chr3_1:70419428-70419447 None:intergenic 50.0%
GGTGGTTTAGGTACATAGGG+TGG - chr3_1:70419440-70419459 None:intergenic 50.0%
ACAGGGACAACTGGTGGTTT+AGG - chr3_1:70419452-70419471 None:intergenic 50.0%
GGTGGCTTAGGAACATAAGG+TGG - chr3_1:70419479-70419498 None:intergenic 50.0%
ACATAGGGTGGTCTCACAAC+AGG - chr3_1:70419428-70419447 None:intergenic 50.0%
GGTGGTTTAGGTACATAGGG+TGG - chr3_1:70419440-70419459 None:intergenic 50.0%
ACAGGGACAACTGGTGGTTT+AGG - chr3_1:70419452-70419471 None:intergenic 50.0%
GGTGGCTTAGGAACATAAGG+TGG - chr3_1:70419479-70419498 None:intergenic 50.0%
!! GAGGTAGTGGAACATGTGGT+GGG - chr3_1:70419598-70419617 None:intergenic 50.0%
!! ACTGGAGGTAGTGGAACATG+TGG - chr3_1:70419602-70419621 None:intergenic 50.0%
GATGGTACAACTGGAGGTAG+TGG - chr3_1:70419611-70419630 None:intergenic 50.0%
ACTGGAGGTAGAGGAACATG+TGG - chr3_1:70419689-70419708 None:intergenic 50.0%
!! GGTGGTGTTACAATAGGTGG+TGG - chr3_1:70419740-70419759 None:intergenic 50.0%
!! ATTGGAGGTGTTGGTGTTGG+TGG - chr3_1:70419758-70419777 None:intergenic 50.0%
! GGTGTCACAATTGGAGGTGT+TGG - chr3_1:70419767-70419786 None:intergenic 50.0%
!! ACTGGTGGTGTCACAATTGG+AGG - chr3_1:70419773-70419792 None:intergenic 50.0%
TCCAATTGTGACACCACCAG+TGG + chr3_1:70419772-70419791 Msa0372100:CDS 50.0%
!! ACCACTGGTGGTGTCACAAT+TGG - chr3_1:70419776-70419795 None:intergenic 50.0%
! GTTTCACTAGGTGGTGTTGG+TGG - chr3_1:70419803-70419822 None:intergenic 50.0%
GGTGTTTCACTAGGTGGTGT+TGG - chr3_1:70419806-70419825 None:intergenic 50.0%
GGACATGGTGTTTCACTAGG+TGG - chr3_1:70419812-70419831 None:intergenic 50.0%
GGAGGACATGGTGTTTCACT+AGG - chr3_1:70419815-70419834 None:intergenic 50.0%
!! TAAGGTACAAGTGGTGGTGG+AGG - chr3_1:70419833-70419852 None:intergenic 50.0%
GGATAAGGTACAAGTGGTGG+TGG - chr3_1:70419836-70419855 None:intergenic 50.0%
GGTGGATAAGGTACAAGTGG+TGG - chr3_1:70419839-70419858 None:intergenic 50.0%
!! GTTTGTTGTGCTGGTGGTGT+AGG - chr3_1:70419860-70419879 None:intergenic 50.0%
! GGTGCATGTGTTGATGTGCT+TGG + chr3_1:70419905-70419924 Msa0372100:CDS 50.0%
! GCATGTGTTGATGTGCTTGG+TGG + chr3_1:70419908-70419927 Msa0372100:CDS 50.0%
TGTTATCCCCCTTGCTCTTC+AGG + chr3_1:70420060-70420079 Msa0372100:CDS 50.0%
TGAGAACCTGAAGAGCAAGG+GGG - chr3_1:70420069-70420088 None:intergenic 50.0%
TGTGGCAAAACTCCACCAGA+AGG + chr3_1:70420094-70420113 Msa0372100:CDS 50.0%
GTGGCAAAACTCCACCAGAA+GGG + chr3_1:70420095-70420114 Msa0372100:CDS 50.0%
! GGTGGTTTAGGGCTTGGGTA+AGG - chr3_1:70419080-70419099 None:intergenic 55.0%
!! GGGTGGTGTGTTGGTGGTTT+AGG - chr3_1:70419092-70419111 None:intergenic 55.0%
ATAGGAGGGTGGTGTGTTGG+TGG - chr3_1:70419098-70419117 None:intergenic 55.0%
!! GTTGATGATGGGGGTGGACA+AGG - chr3_1:70419212-70419231 None:intergenic 55.0%
! ACTGGGGGTTTGGGATGATG+AGG - chr3_1:70419263-70419282 None:intergenic 55.0%
!! ATGTGGTGGGTGCACTACTG+GGG - chr3_1:70419279-70419298 None:intergenic 55.0%
!! CATGTGGTGGGTGCACTACT+GGG - chr3_1:70419280-70419299 None:intergenic 55.0%
!! ACATGTGGTGGGTGCACTAC+TGG - chr3_1:70419281-70419300 None:intergenic 55.0%
!!! GGGGGTTTTGGAACATGTGG+TGG - chr3_1:70419293-70419312 None:intergenic 55.0%
! GGTGGATGTACTGGGGGTTT+TGG - chr3_1:70419305-70419324 None:intergenic 55.0%
!! GGGGGTTTTGGTACGTAAGG+TGG - chr3_1:70419371-70419390 None:intergenic 55.0%
!! ACCGGGGGTTTTGGTACGTA+AGG - chr3_1:70419374-70419393 None:intergenic 55.0%
! GGTTTCACAACCGGGGGTTT+TGG - chr3_1:70419383-70419402 None:intergenic 55.0%
!! TGGTGGTGGTTTCACAACCG+GGG - chr3_1:70419390-70419409 None:intergenic 55.0%
GGCTTAGGGACATATGGTGG+TGG - chr3_1:70419404-70419423 None:intergenic 55.0%
GGTGGCTTAGGGACATATGG+TGG - chr3_1:70419407-70419426 None:intergenic 55.0%
GGTCTCACAACAGGTGGCTT+AGG - chr3_1:70419419-70419438 None:intergenic 55.0%
TAGGGTGGTCTCACAACAGG+TGG - chr3_1:70419425-70419444 None:intergenic 55.0%
! GGTGTTACAGGGACAACTGG+TGG - chr3_1:70419458-70419477 None:intergenic 55.0%
!! GGTGGTGTTACAGGGACAAC+TGG - chr3_1:70419461-70419480 None:intergenic 55.0%
GGTCTCACAACAGGTGGCTT+AGG - chr3_1:70419419-70419438 None:intergenic 55.0%
TAGGGTGGTCTCACAACAGG+TGG - chr3_1:70419425-70419444 None:intergenic 55.0%
! GGTGTTACAGGGACAACTGG+TGG - chr3_1:70419458-70419477 None:intergenic 55.0%
!! GGTGGTGTTACAGGGACAAC+TGG - chr3_1:70419461-70419480 None:intergenic 55.0%
!! GGAGGTAGTGGAACATGTGG+TGG - chr3_1:70419599-70419618 None:intergenic 55.0%
! GGTGTTGGGACATAAGGTGG+CGG - chr3_1:70419635-70419654 None:intergenic 55.0%
!! GGAGGTGTTGGGACATAAGG+TGG - chr3_1:70419638-70419657 None:intergenic 55.0%
GGAGGTAGAGGAACATGTGG+TGG - chr3_1:70419686-70419705 None:intergenic 55.0%
ACAGGCACAACTGGAGGTAG+AGG - chr3_1:70419698-70419717 None:intergenic 55.0%
! GGTGTTACAGGCACAACTGG+AGG - chr3_1:70419704-70419723 None:intergenic 55.0%
!! GGTGGTGTTACAGGCACAAC+TGG - chr3_1:70419707-70419726 None:intergenic 55.0%
! GGTGGTGGTTGCACATAAGG+TGG - chr3_1:70419725-70419744 None:intergenic 55.0%
!! GTTGGTGGTGTAACCACTGG+TGG - chr3_1:70419788-70419807 None:intergenic 55.0%
!! GGTGTTGGTGGTGTAACCAC+TGG - chr3_1:70419791-70419810 None:intergenic 55.0%
!! ACAAGTGGTGGTGGAGGACA+TGG - chr3_1:70419827-70419846 None:intergenic 55.0%
! GCTGGTGGTGTAGGTGGATA+AGG - chr3_1:70419851-70419870 None:intergenic 55.0%
! TGTTGTGCTGGTGGTGTAGG+TGG - chr3_1:70419857-70419876 None:intergenic 55.0%
GGGCACTTAAACCCTTCTGG+TGG - chr3_1:70420109-70420128 None:intergenic 55.0%
GCTGGGCACTTAAACCCTTC+TGG - chr3_1:70420112-70420131 None:intergenic 55.0%
! GGTGGTTTAGGGCTTGGGTA+AGG - chr3_1:70419080-70419099 None:intergenic 55.0%
!! GGGTGGTGTGTTGGTGGTTT+AGG - chr3_1:70419092-70419111 None:intergenic 55.0%
ATAGGAGGGTGGTGTGTTGG+TGG - chr3_1:70419098-70419117 None:intergenic 55.0%
!! GTTGATGATGGGGGTGGACA+AGG - chr3_1:70419212-70419231 None:intergenic 55.0%
! ACTGGGGGTTTGGGATGATG+AGG - chr3_1:70419263-70419282 None:intergenic 55.0%
!! ATGTGGTGGGTGCACTACTG+GGG - chr3_1:70419279-70419298 None:intergenic 55.0%
!! CATGTGGTGGGTGCACTACT+GGG - chr3_1:70419280-70419299 None:intergenic 55.0%
!! ACATGTGGTGGGTGCACTAC+TGG - chr3_1:70419281-70419300 None:intergenic 55.0%
!!! GGGGGTTTTGGAACATGTGG+TGG - chr3_1:70419293-70419312 None:intergenic 55.0%
! GGTGGATGTACTGGGGGTTT+TGG - chr3_1:70419305-70419324 None:intergenic 55.0%
!! GGGGGTTTTGGTACGTAAGG+TGG - chr3_1:70419371-70419390 None:intergenic 55.0%
!! ACCGGGGGTTTTGGTACGTA+AGG - chr3_1:70419374-70419393 None:intergenic 55.0%
! GGTTTCACAACCGGGGGTTT+TGG - chr3_1:70419383-70419402 None:intergenic 55.0%
!! TGGTGGTGGTTTCACAACCG+GGG - chr3_1:70419390-70419409 None:intergenic 55.0%
GGCTTAGGGACATATGGTGG+TGG - chr3_1:70419404-70419423 None:intergenic 55.0%
GGTGGCTTAGGGACATATGG+TGG - chr3_1:70419407-70419426 None:intergenic 55.0%
GGTCTCACAACAGGTGGCTT+AGG - chr3_1:70419419-70419438 None:intergenic 55.0%
TAGGGTGGTCTCACAACAGG+TGG - chr3_1:70419425-70419444 None:intergenic 55.0%
! GGTGTTACAGGGACAACTGG+TGG - chr3_1:70419458-70419477 None:intergenic 55.0%
!! GGTGGTGTTACAGGGACAAC+TGG - chr3_1:70419461-70419480 None:intergenic 55.0%
GGTCTCACAACAGGTGGCTT+AGG - chr3_1:70419419-70419438 None:intergenic 55.0%
TAGGGTGGTCTCACAACAGG+TGG - chr3_1:70419425-70419444 None:intergenic 55.0%
! GGTGTTACAGGGACAACTGG+TGG - chr3_1:70419458-70419477 None:intergenic 55.0%
!! GGTGGTGTTACAGGGACAAC+TGG - chr3_1:70419461-70419480 None:intergenic 55.0%
!! GGAGGTAGTGGAACATGTGG+TGG - chr3_1:70419599-70419618 None:intergenic 55.0%
! GGTGTTGGGACATAAGGTGG+CGG - chr3_1:70419635-70419654 None:intergenic 55.0%
!! GGAGGTGTTGGGACATAAGG+TGG - chr3_1:70419638-70419657 None:intergenic 55.0%
GGAGGTAGAGGAACATGTGG+TGG - chr3_1:70419686-70419705 None:intergenic 55.0%
ACAGGCACAACTGGAGGTAG+AGG - chr3_1:70419698-70419717 None:intergenic 55.0%
! GGTGTTACAGGCACAACTGG+AGG - chr3_1:70419704-70419723 None:intergenic 55.0%
!! GGTGGTGTTACAGGCACAAC+TGG - chr3_1:70419707-70419726 None:intergenic 55.0%
! GGTGGTGGTTGCACATAAGG+TGG - chr3_1:70419725-70419744 None:intergenic 55.0%
!! GTTGGTGGTGTAACCACTGG+TGG - chr3_1:70419788-70419807 None:intergenic 55.0%
!! GGTGTTGGTGGTGTAACCAC+TGG - chr3_1:70419791-70419810 None:intergenic 55.0%
!! ACAAGTGGTGGTGGAGGACA+TGG - chr3_1:70419827-70419846 None:intergenic 55.0%
! GCTGGTGGTGTAGGTGGATA+AGG - chr3_1:70419851-70419870 None:intergenic 55.0%
! TGTTGTGCTGGTGGTGTAGG+TGG - chr3_1:70419857-70419876 None:intergenic 55.0%
GGGCACTTAAACCCTTCTGG+TGG - chr3_1:70420109-70420128 None:intergenic 55.0%
GCTGGGCACTTAAACCCTTC+TGG - chr3_1:70420112-70420131 None:intergenic 55.0%
GATGGGGGTGGACAAGGTGA+TGG - chr3_1:70419206-70419225 None:intergenic 60.0%
! GGGGGTTTGGGATGATGAGG+AGG - chr3_1:70419260-70419279 None:intergenic 60.0%
GGGTGCACTACTGGGGGTTT+GGG - chr3_1:70419272-70419291 None:intergenic 60.0%
TGGGTGCACTACTGGGGGTT+TGG - chr3_1:70419273-70419292 None:intergenic 60.0%
!! TGTGGTGGGTGCACTACTGG+GGG - chr3_1:70419278-70419297 None:intergenic 60.0%
! GGTGGTGGTTTCACAACCGG+GGG - chr3_1:70419389-70419408 None:intergenic 60.0%
! GGCGGTGATGGTACAACTGG+AGG - chr3_1:70419617-70419636 None:intergenic 60.0%
! GGTGGCGGTGATGGTACAAC+TGG - chr3_1:70419620-70419639 None:intergenic 60.0%
! GGGACATAAGGTGGCGGTGA+TGG - chr3_1:70419629-70419648 None:intergenic 60.0%
GATGGGGGTGGACAAGGTGA+TGG - chr3_1:70419206-70419225 None:intergenic 60.0%
! GGGGGTTTGGGATGATGAGG+AGG - chr3_1:70419260-70419279 None:intergenic 60.0%
GGGTGCACTACTGGGGGTTT+GGG - chr3_1:70419272-70419291 None:intergenic 60.0%
TGGGTGCACTACTGGGGGTT+TGG - chr3_1:70419273-70419292 None:intergenic 60.0%
!! TGTGGTGGGTGCACTACTGG+GGG - chr3_1:70419278-70419297 None:intergenic 60.0%
! GGTGGTGGTTTCACAACCGG+GGG - chr3_1:70419389-70419408 None:intergenic 60.0%
! GGCGGTGATGGTACAACTGG+AGG - chr3_1:70419617-70419636 None:intergenic 60.0%
! GGTGGCGGTGATGGTACAAC+TGG - chr3_1:70419620-70419639 None:intergenic 60.0%
! GGGACATAAGGTGGCGGTGA+TGG - chr3_1:70419629-70419648 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 70418993 70420138 70418993 ID=Msa0372100;Name=Msa0372100
chr3_1 mRNA 70418993 70420138 70418993 ID=Msa0372100-mRNA-1;Parent=Msa0372100;Name=Msa0372100-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|-1|0|1|-1|1|1|0|381
chr3_1 exon 70418993 70420138 70418993 ID=Msa0372100-mRNA-1:exon:15309;Parent=Msa0372100-mRNA-1
chr3_1 CDS 70418993 70420138 70418993 ID=Msa0372100-mRNA-1:cds;Parent=Msa0372100-mRNA-1
Gene Sequence

>Msa0372100

ATGGCTAACTATGCTCTAGCCAATGTTTTCATCCTTCTCTTGAACTTGAGTACCTTACTCAATGTTCTTGCTTGCCCTTATTGTCCTTACCCAAGCCCTAAACCACCAACACACCACCCTCCTATTGTTAAGCCACCAGTTCACAAACCACCAAAGTATTCTCCTACTCCTAAACCACCAGTTCACAAACCACCAAGATATCCTCCTAAACCATCACCTTGTCCACCCCCATCATCAACACCAAAACCACCACATGTTCCAAAACCTCCTCATCATCCCAAACCCCCAGTAGTGCACCCACCACATGTTCCAAAACCCCCAGTACATCCACCTTATGTGCCAAAACCACCAATTGTTAAACCTCCAATAGTACATCCACCTTACGTACCAAAACCCCCGGTTGTGAAACCACCACCATATGTCCCTAAGCCACCTGTTGTGAGACCACCCTATGTACCTAAACCACCAGTTGTCCCTGTAACACCACCTTATGTTCCTAAGCCACCTGTTGTGAGACCACCCTATGTACCTAAACCACCAGTTGTCCCTGTAACACCACCTTATGTTCCTAAGCCACCAATTGTGAAACCACCAATTGTTTTCCCACCACATGTTCCACTACCTCCAGTTGTACCATCACCGCCACCTTATGTCCCAACACCTCCAATTGTGAAACCACCAATTGTTTTTCCACCACATGTTCCTCTACCTCCAGTTGTGCCTGTAACACCACCTTATGTGCAACCACCACCTATTGTAACACCACCAACACCAACACCTCCAATTGTGACACCACCAGTGGTTACACCACCAACACCACCTAGTGAAACACCATGTCCTCCACCACCACTTGTACCTTATCCACCTACACCACCAGCACAACAAACATGTTCCATTGATGCTTTGAAGTTGGGTGCATGTGTTGATGTGCTTGGTGGACTCATACATATTGGTATCGGTGGAAGTGCTAAACAAACATGTTGTCCATTGCTTCAAGGACTTGTTGATTTGGATGCAGCTATATGTCTCTGCACCACTATTAGACTTAAACTTCTTAATATCAATCTTGTTATCCCCCTTGCTCTTCAGGTTCTCATTGATTGTGGCAAAACTCCACCAGAAGGGTTTAAGTGCCCAGCTTATTAA
Protein sequence

>Msa0372100

MANYALANVFILLLNLSTLLNVLACPYCPYPSPKPPTHHPPIVKPPVHKPPKYSPTPKPPVHKPPRYPPKPSPCPPPSSTPKPPHVPKPPHHPKPPVVHPPHVPKPPVHPPYVPKPPIVKPPIVHPPYVPKPPVVKPPPYVPKPPVVRPPYVPKPPVVPVTPPYVPKPPVVRPPYVPKPPVVPVTPPYVPKPPIVKPPIVFPPHVPLPPVVPSPPPYVPTPPIVKPPIVFPPHVPLPPVVPVTPPYVQPPPIVTPPTPTPPIVTPPVVTPPTPPSETPCPPPPLVPYPPTPPAQQTCSIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLQGLVDLDAAICLCTTIRLKLLNINLVIPLALQVLIDCGKTPPEGFKCPAY*