Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238500 | XP_027905957.1 | 57.239 | 594 | 173 | 9 | 40 | 555 | 311 | 901 | 0.0 | 639 |
Msa1238500 | XP_027905957.1 | 57.833 | 600 | 163 | 10 | 44 | 555 | 1 | 598 | 0.0 | 647 |
Msa1238500 | XP_027905957.1 | 66.441 | 295 | 88 | 3 | 43 | 327 | 617 | 910 | 1.08e-123 | 395 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238500 | sp|Q9M2E2|SDR1_ARATH | 58.528 | 299 | 106 | 6 | 44 | 330 | 1 | 293 | 1.12e-113 | 342 |
Msa1238500 | sp|Q9M2E2|SDR1_ARATH | 42.806 | 278 | 102 | 7 | 333 | 554 | 3 | 279 | 4.72e-63 | 211 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238500 | A0A4D6MRN2 | 57.718 | 596 | 170 | 10 | 30 | 555 | 271 | 854 | 0.0 | 644 |
Msa1238500 | A0A4D6MRN2 | 57.904 | 582 | 158 | 8 | 44 | 555 | 1 | 565 | 0.0 | 631 |
Msa1238500 | A0A4D6MRN2 | 67.247 | 287 | 81 | 3 | 49 | 325 | 578 | 861 | 6.80e-123 | 391 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001830 | Msa1238500 | 0.807037 | 6.147628e-50 | -8.615850e-47 |
Msa0082420 | Msa1238500 | 0.808806 | 2.584200e-50 | -8.615850e-47 |
Msa0741440 | Msa1238500 | 0.807639 | 4.581472e-50 | -8.615850e-47 |
Msa0822500 | Msa1238500 | 0.807356 | 5.262259e-50 | -8.615850e-47 |
Msa0138020 | Msa1238500 | 0.805038 | 1.618902e-49 | -8.615850e-47 |
Msa0160960 | Msa1238500 | 0.804448 | 2.150006e-49 | -8.615850e-47 |
Msa1238500 | Msa1239620 | 0.804048 | 2.603836e-49 | -8.615850e-47 |
Msa1238500 | Msa1325410 | -0.808318 | 3.284455e-50 | -8.615850e-47 |
Msa1238500 | Msa1346840 | 0.844770 | 6.153082e-59 | -8.615850e-47 |
Msa1238500 | Msa1401990 | 0.800459 | 1.426810e-48 | -8.615850e-47 |
Msa1238500 | Msa1442920 | 0.800246 | 1.576640e-48 | -8.615850e-47 |
Msa1238500 | Msa1450440 | 0.811946 | 5.426867e-51 | -8.615850e-47 |
Msa1062040 | Msa1238500 | 0.802109 | 6.557220e-49 | -8.615850e-47 |
Msa1089460 | Msa1238500 | 0.833372 | 5.537487e-56 | -8.615850e-47 |
Msa0278580 | Msa1238500 | 0.823981 | 1.033782e-53 | -8.615850e-47 |
Msa0317960 | Msa1238500 | 0.812417 | 4.284991e-51 | -8.615850e-47 |
Msa0318680 | Msa1238500 | 0.838231 | 3.252288e-57 | -8.615850e-47 |
Msa1107200 | Msa1238500 | 0.805275 | 1.443893e-49 | -8.615850e-47 |
Msa1122150 | Msa1238500 | 0.822340 | 2.496197e-53 | -8.615850e-47 |
Msa1140630 | Msa1238500 | 0.845667 | 3.519266e-59 | -8.615850e-47 |
Msa1160560 | Msa1238500 | 0.821798 | 3.333362e-53 | -8.615850e-47 |
Msa1184910 | Msa1238500 | 0.807366 | 5.236321e-50 | -8.615850e-47 |
Msa0545050 | Msa1238500 | 0.805294 | 1.430910e-49 | -8.615850e-47 |
Msa0574930 | Msa1238500 | 0.815992 | 6.956608e-52 | -8.615850e-47 |
Msa0600590 | Msa1238500 | 0.805276 | 1.443724e-49 | -8.615850e-47 |
Msa0878220 | Msa1238500 | 0.803957 | 2.720711e-49 | -8.615850e-47 |
Msa0944020 | Msa1238500 | 0.819357 | 1.211835e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238500 | MtrunA17_Chr8g0349851 | 91.216 | 296 | 17 | 1 | 44 | 330 | 1 | 296 | 0.0 | 553 |
Msa1238500 | MtrunA17_Chr8g0349851 | 74.825 | 143 | 30 | 1 | 333 | 475 | 3 | 139 | 6.86e-64 | 211 |
Msa1238500 | MtrunA17_Chr8g0349851 | 80.519 | 77 | 15 | 0 | 479 | 555 | 208 | 284 | 1.68e-37 | 140 |
Msa1238500 | MtrunA17_Chr8g0349811 | 81.757 | 296 | 44 | 2 | 44 | 330 | 1 | 295 | 1.13e-174 | 495 |
Msa1238500 | MtrunA17_Chr8g0349811 | 77.778 | 144 | 25 | 2 | 332 | 475 | 2 | 138 | 7.23e-66 | 216 |
Msa1238500 | MtrunA17_Chr8g0349811 | 83.117 | 77 | 13 | 0 | 479 | 555 | 207 | 283 | 7.05e-39 | 144 |
Msa1238500 | MtrunA17_Chr8g0349781 | 82.373 | 295 | 42 | 2 | 44 | 329 | 1 | 294 | 5.40e-173 | 491 |
Msa1238500 | MtrunA17_Chr8g0349781 | 79.861 | 144 | 22 | 2 | 332 | 475 | 2 | 138 | 6.10e-66 | 216 |
Msa1238500 | MtrunA17_Chr8g0349781 | 80.519 | 77 | 15 | 0 | 479 | 555 | 207 | 283 | 8.69e-38 | 141 |
Msa1238500 | MtrunA17_Chr8g0349831 | 79.932 | 294 | 50 | 1 | 46 | 330 | 4 | 297 | 1.36e-168 | 479 |
Msa1238500 | MtrunA17_Chr8g0349831 | 80.822 | 146 | 22 | 1 | 330 | 475 | 1 | 140 | 8.61e-71 | 229 |
Msa1238500 | MtrunA17_Chr8g0349801 | 80.612 | 294 | 47 | 2 | 44 | 328 | 1 | 293 | 6.01e-168 | 478 |
Msa1238500 | MtrunA17_Chr8g0349801 | 79.167 | 144 | 23 | 2 | 332 | 475 | 2 | 138 | 1.42e-66 | 218 |
Msa1238500 | MtrunA17_Chr8g0349801 | 79.221 | 77 | 16 | 0 | 479 | 555 | 207 | 283 | 2.84e-36 | 137 |
Msa1238500 | MtrunA17_Chr8g0349771 | 67.568 | 296 | 86 | 2 | 44 | 330 | 1 | 295 | 4.78e-140 | 407 |
Msa1238500 | MtrunA17_Chr8g0349771 | 52.650 | 283 | 74 | 4 | 332 | 555 | 2 | 283 | 2.41e-87 | 272 |
Msa1238500 | MtrunA17_Chr8g0349761 | 65.529 | 293 | 91 | 2 | 47 | 330 | 5 | 296 | 2.37e-136 | 397 |
Msa1238500 | MtrunA17_Chr8g0349761 | 55.556 | 279 | 62 | 4 | 337 | 555 | 8 | 284 | 3.46e-91 | 282 |
Msa1238500 | MtrunA17_Chr8g0349751 | 64.356 | 303 | 97 | 2 | 38 | 330 | 45 | 346 | 7.00e-132 | 388 |
Msa1238500 | MtrunA17_Chr8g0349751 | 51.930 | 285 | 74 | 6 | 332 | 555 | 52 | 334 | 1.34e-80 | 256 |
Msa1238500 | MtrunA17_Chr7g0247011 | 56.419 | 296 | 107 | 3 | 44 | 330 | 1 | 283 | 1.67e-113 | 338 |
Msa1238500 | MtrunA17_Chr7g0247011 | 45.588 | 272 | 98 | 4 | 332 | 555 | 2 | 271 | 8.26e-72 | 231 |
Msa1238500 | MtrunA17_Chr8g0349721 | 54.054 | 296 | 121 | 3 | 44 | 330 | 1 | 290 | 2.56e-110 | 331 |
Msa1238500 | MtrunA17_Chr8g0349721 | 42.754 | 276 | 103 | 6 | 333 | 554 | 3 | 277 | 1.58e-58 | 196 |
Msa1238500 | MtrunA17_Chr8g0349641 | 58.020 | 293 | 109 | 2 | 44 | 325 | 1 | 290 | 3.90e-110 | 330 |
Msa1238500 | MtrunA17_Chr8g0349641 | 42.958 | 284 | 98 | 6 | 333 | 555 | 3 | 283 | 2.90e-59 | 199 |
Msa1238500 | MtrunA17_Chr8g0349671 | 56.566 | 297 | 114 | 3 | 44 | 329 | 1 | 293 | 3.00e-109 | 328 |
Msa1238500 | MtrunA17_Chr8g0349671 | 41.637 | 281 | 106 | 4 | 333 | 555 | 3 | 283 | 4.67e-59 | 198 |
Msa1238500 | MtrunA17_Chr8g0349701 | 54.054 | 296 | 121 | 4 | 44 | 330 | 1 | 290 | 3.51e-109 | 328 |
Msa1238500 | MtrunA17_Chr8g0349701 | 42.754 | 276 | 103 | 6 | 333 | 554 | 3 | 277 | 6.37e-58 | 195 |
Msa1238500 | MtrunA17_Chr8g0349741 | 57.192 | 292 | 102 | 4 | 49 | 330 | 6 | 284 | 4.56e-109 | 327 |
Msa1238500 | MtrunA17_Chr8g0349741 | 46.008 | 263 | 95 | 7 | 337 | 552 | 7 | 269 | 5.80e-63 | 208 |
Msa1238500 | MtrunA17_Chr7g0247041 | 55.254 | 295 | 117 | 4 | 46 | 330 | 2 | 291 | 9.02e-107 | 322 |
Msa1238500 | MtrunA17_Chr7g0247041 | 43.636 | 275 | 96 | 6 | 337 | 554 | 6 | 278 | 9.57e-58 | 194 |
Msa1238500 | MtrunA17_Chr7g0247031 | 55.749 | 287 | 104 | 4 | 49 | 325 | 7 | 280 | 2.77e-104 | 315 |
Msa1238500 | MtrunA17_Chr7g0247031 | 42.697 | 267 | 102 | 5 | 337 | 554 | 8 | 272 | 9.73e-61 | 202 |
Msa1238500 | MtrunA17_Chr5g0425391 | 50.847 | 295 | 132 | 4 | 44 | 329 | 1 | 291 | 3.24e-92 | 284 |
Msa1238500 | MtrunA17_Chr5g0425391 | 61.616 | 99 | 38 | 0 | 333 | 431 | 3 | 101 | 8.34e-32 | 124 |
Msa1238500 | MtrunA17_Chr8g0349651 | 50.379 | 264 | 117 | 3 | 76 | 329 | 12 | 271 | 1.25e-83 | 261 |
Msa1238500 | MtrunA17_Chr8g0349651 | 36.822 | 258 | 100 | 5 | 358 | 555 | 7 | 261 | 1.41e-43 | 156 |
Msa1238500 | MtrunA17_Chr3g0118511 | 48.621 | 290 | 133 | 6 | 50 | 325 | 3 | 290 | 2.65e-83 | 261 |
Msa1238500 | MtrunA17_Chr3g0118511 | 62.105 | 95 | 35 | 1 | 337 | 431 | 3 | 96 | 1.17e-29 | 118 |
Msa1238500 | MtrunA17_Chr7g0267881 | 48.178 | 247 | 84 | 3 | 42 | 274 | 1 | 217 | 5.39e-65 | 211 |
Msa1238500 | MtrunA17_Chr7g0267881 | 38.073 | 218 | 83 | 4 | 337 | 511 | 9 | 217 | 1.91e-34 | 130 |
Msa1238500 | MtrunA17_Chr3g0131521 | 36.364 | 330 | 154 | 7 | 20 | 329 | 14 | 307 | 1.04e-57 | 195 |
Msa1238500 | MtrunA17_Chr3g0131521 | 35.849 | 265 | 115 | 7 | 339 | 554 | 37 | 295 | 8.87e-36 | 136 |
Msa1238500 | MtrunA17_Chr1g0160511 | 35.152 | 330 | 158 | 9 | 20 | 329 | 19 | 312 | 1.51e-49 | 173 |
Msa1238500 | MtrunA17_Chr1g0160511 | 34.231 | 260 | 122 | 7 | 339 | 552 | 42 | 298 | 5.19e-33 | 128 |
Msa1238500 | MtrunA17_Chr8g0385581 | 33.233 | 331 | 168 | 8 | 19 | 329 | 15 | 312 | 1.14e-47 | 168 |
Msa1238500 | MtrunA17_Chr8g0385581 | 30.038 | 263 | 134 | 4 | 339 | 553 | 39 | 299 | 7.98e-30 | 119 |
Msa1238500 | MtrunA17_Chr5g0437701 | 51.240 | 121 | 50 | 1 | 219 | 330 | 5 | 125 | 2.89e-39 | 139 |
Msa1238500 | MtrunA17_Chr5g0437701 | 59.459 | 74 | 30 | 0 | 481 | 554 | 39 | 112 | 6.60e-24 | 97.4 |
Msa1238500 | MtrunA17_Chr4g0045691 | 33.133 | 166 | 90 | 5 | 180 | 325 | 1 | 165 | 8.03e-21 | 90.1 |
Msa1238500 | MtrunA17_Chr4g0045691 | 35.897 | 78 | 45 | 1 | 481 | 553 | 78 | 155 | 2.29e-12 | 65.9 |
Msa1238500 | MtrunA17_Chr4g0045711 | 51.724 | 87 | 37 | 3 | 339 | 420 | 24 | 110 | 4.57e-15 | 71.6 |
Msa1238500 | MtrunA17_Chr4g0045711 | 50.000 | 90 | 40 | 3 | 49 | 133 | 21 | 110 | 2.38e-14 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238500 | AT3G61220.1 | 58.528 | 299 | 106 | 6 | 44 | 330 | 1 | 293 | 1.14e-114 | 342 |
Msa1238500 | AT3G61220.1 | 42.806 | 278 | 102 | 7 | 333 | 554 | 3 | 279 | 4.80e-64 | 211 |
Msa1238500 | AT3G61220.2 | 58.703 | 293 | 103 | 6 | 50 | 330 | 14 | 300 | 1.24e-112 | 337 |
Msa1238500 | AT3G61220.2 | 43.066 | 274 | 99 | 7 | 337 | 554 | 14 | 286 | 4.62e-63 | 209 |
Msa1238500 | AT3G61220.3 | 58.703 | 293 | 103 | 6 | 50 | 330 | 38 | 324 | 4.21e-112 | 337 |
Msa1238500 | AT3G61220.3 | 43.066 | 274 | 99 | 7 | 337 | 554 | 38 | 310 | 1.10e-62 | 209 |
Msa1238500 | AT2G24190.1 | 54.515 | 299 | 118 | 6 | 44 | 330 | 1 | 293 | 2.05e-105 | 318 |
Msa1238500 | AT2G24190.1 | 43.165 | 278 | 101 | 8 | 333 | 554 | 3 | 279 | 1.51e-61 | 205 |
Msa1238500 | AT1G01800.1 | 55.709 | 289 | 113 | 5 | 50 | 327 | 5 | 289 | 6.36e-105 | 317 |
Msa1238500 | AT1G01800.1 | 41.877 | 277 | 102 | 8 | 337 | 555 | 5 | 280 | 2.09e-54 | 186 |
Msa1238500 | AT2G24190.2 | 54.949 | 293 | 114 | 6 | 50 | 330 | 12 | 298 | 4.99e-104 | 315 |
Msa1238500 | AT2G24190.2 | 43.066 | 274 | 99 | 8 | 337 | 554 | 12 | 284 | 2.67e-60 | 202 |
Msa1238500 | AT1G01800.2 | 51.961 | 204 | 85 | 3 | 133 | 327 | 55 | 254 | 3.44e-67 | 218 |
Msa1238500 | AT1G01800.2 | 54.667 | 75 | 34 | 0 | 481 | 555 | 171 | 245 | 3.00e-21 | 94.0 |
Msa1238500 | AT5G51030.1 | 35.099 | 302 | 149 | 8 | 48 | 329 | 36 | 310 | 8.04e-51 | 177 |
Msa1238500 | AT5G51030.1 | 32.567 | 261 | 129 | 5 | 339 | 554 | 40 | 298 | 9.06e-36 | 136 |
Msa1238500 | AT3G59710.3 | 34.483 | 290 | 150 | 7 | 49 | 325 | 18 | 280 | 2.31e-43 | 156 |
Msa1238500 | AT3G59710.3 | 34.783 | 276 | 135 | 9 | 314 | 553 | 4 | 270 | 2.81e-36 | 137 |
Msa1238500 | AT3G59710.1 | 34.483 | 290 | 150 | 7 | 49 | 325 | 28 | 290 | 3.86e-43 | 156 |
Msa1238500 | AT3G59710.1 | 36.255 | 251 | 123 | 8 | 339 | 553 | 31 | 280 | 1.03e-34 | 133 |
Msa1238500 | AT3G59710.2 | 34.483 | 290 | 150 | 7 | 49 | 325 | 47 | 309 | 1.11e-42 | 155 |
Msa1238500 | AT3G59710.2 | 36.255 | 251 | 123 | 8 | 339 | 553 | 50 | 299 | 1.65e-34 | 133 |
Msa1238500 | AT5G61830.1 | 36.093 | 302 | 147 | 8 | 49 | 329 | 36 | 312 | 1.66e-41 | 152 |
Msa1238500 | AT5G61830.1 | 33.462 | 260 | 126 | 4 | 339 | 552 | 39 | 297 | 5.00e-31 | 123 |
Msa1238500 | AT5G61830.2 | 36.093 | 302 | 147 | 8 | 49 | 329 | 36 | 312 | 1.66e-41 | 152 |
Msa1238500 | AT5G61830.2 | 33.462 | 260 | 126 | 4 | 339 | 552 | 39 | 297 | 5.00e-31 | 123 |
Find 101 sgRNAs with CRISPR-Local
Find 609 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCATTCAAATAAATTATTA+TGG | 0.154385 | 8_2:-18887626 | Msa1238500:CDS |
ATTTGGCAAACTTGATATTC+TGG | 0.218733 | 8_2:-18888975 | Msa1238500:intron |
CATCTATTCTCTCTTCTGTT+AGG | 0.258784 | 8_2:+18886956 | None:intergenic |
ATTTGGCAAACTTGACATTC+TGG | 0.281094 | 8_2:-18881304 | Msa1238500:intron |
GAGAATAGATGAAGTAATAA+AGG | 0.307579 | 8_2:-18886944 | Msa1238500:CDS |
CGCAAATTCTTCTGTGACTA+AGG | 0.338476 | 8_2:+18889411 | None:intergenic |
CTCAGGTATGCAGTGGTGAC+TGG | 0.354241 | 8_2:-18889205 | Msa1238500:intron |
AAAATGAAATAACTTTATTC+TGG | 0.354984 | 8_2:+18886650 | None:intergenic |
ACCTGTATTAGCAGTTATAT+CGG | 0.361405 | 8_2:+18879486 | None:intergenic |
TATATTCTTCCATCTTTAGT+TGG | 0.366803 | 8_2:+18889338 | None:intergenic |
ACCAGTATTAGCATTTATAT+CGG | 0.369550 | 8_2:+18886756 | None:intergenic |
GCATTCAAATAAATTATTAT+GGG | 0.371941 | 8_2:-18887625 | Msa1238500:CDS |
GTTCCTTAGAAAGAAAAGTT+TGG | 0.380027 | 8_2:-18879627 | Msa1238500:CDS |
ATCAGTATGTATCAAATGAA+TGG | 0.381467 | 8_2:-18887008 | Msa1238500:intron |
GAAAAGAGGTCTTCATGCTT+TGG | 0.381657 | 8_2:-18889101 | Msa1238500:CDS |
GGATTGGGTTAGAGATAGTA+AGG | 0.386961 | 8_2:-18881500 | Msa1238500:CDS |
ATAGTTGAAGGAGGGGAAGA+AGG | 0.389200 | 8_2:+18887582 | None:intergenic |
GGAAGTAGTGCTAACCTAAC+AGG | 0.389438 | 8_2:+18886703 | None:intergenic |
GGAAGGAGTGCTAACCTAAC+AGG | 0.393468 | 8_2:+18879433 | None:intergenic |
ACTGGAGCAAACAAAGGAAT+TGG | 0.400758 | 8_2:-18889187 | Msa1238500:CDS |
TGCAGGTATGCAGTGGTGAC+TGG | 0.404997 | 8_2:-18881534 | Msa1238500:intron |
ACCGATATAAATGCTAATAC+TGG | 0.405422 | 8_2:-18886757 | Msa1238500:CDS |
AACATCACTGAAGACTCCTT+TGG | 0.418064 | 8_2:+18886984 | None:intergenic |
GTAAGGCAGTTAGCTTCAAC+TGG | 0.422437 | 8_2:-18881483 | Msa1238500:CDS |
CTTCCCAATGGTAGTCCATC+TGG | 0.424788 | 8_2:-18886685 | Msa1238500:CDS |
ATTGCATAGGTTAACAATGC+TGG | 0.431199 | 8_2:-18888163 | Msa1238500:intron |
AGAAGCTTTAGCAACAATAT+AGG | 0.431311 | 8_2:+18879588 | None:intergenic |
AGAAGCTTTAGCAACAATAT+AGG | 0.431311 | 8_2:+18886858 | None:intergenic |
TAGAAAGAAAAGTTTGGCCT+AGG | 0.436904 | 8_2:-18879621 | Msa1238500:CDS |
CTTCAGCAATCATTACGAAT+GGG | 0.443156 | 8_2:-18880957 | Msa1238500:CDS |
TGCTAAGTTCCAACTAAAGA+TGG | 0.443247 | 8_2:-18889347 | Msa1238500:CDS |
TGCTGCAAGTGTAGCTTCTC+TGG | 0.448719 | 8_2:-18889017 | Msa1238500:CDS |
AAGGTGCTGCTCATCCTGTT+AGG | 0.448829 | 8_2:-18886717 | Msa1238500:CDS |
ACTAAACTAATCATGACAAA+GGG | 0.449399 | 8_2:-18888103 | Msa1238500:CDS |
ACTGGATCAAACAAAGGGAT+TGG | 0.459468 | 8_2:-18881516 | Msa1238500:CDS |
ACACAGTTGATGCAGAAGTT+AGG | 0.460623 | 8_2:+18886799 | None:intergenic |
TTGGAAACACTCAAAACCTC+TGG | 0.460844 | 8_2:-18889082 | Msa1238500:CDS |
AAGGTGCTGCTAATCCTGTT+AGG | 0.465183 | 8_2:-18879447 | Msa1238500:CDS |
GTTAAGCAGTTAGCTTCAGC+TGG | 0.466868 | 8_2:-18889154 | Msa1238500:CDS |
TGCATCAATTGTGTTTGTCC+TGG | 0.469872 | 8_2:-18879520 | Msa1238500:CDS |
TCAGTATGTATCAAATGAAT+GGG | 0.473036 | 8_2:-18887007 | Msa1238500:intron |
ACACAATTGATGCAGATACT+AGG | 0.473737 | 8_2:+18879529 | None:intergenic |
ATTGACTACTCTCGGTGAAT+CGG | 0.475680 | 8_2:+18880110 | None:intergenic |
GTTAACAATGCTGGGATTGG+TGG | 0.475719 | 8_2:-18888154 | Msa1238500:CDS |
TGCATCAACTGTGTTTGCCC+TGG | 0.476427 | 8_2:-18886790 | Msa1238500:CDS |
GATGATACATTGACTACTCT+TGG | 0.488410 | 8_2:+18887551 | None:intergenic |
TTGCATAGGTTAACAATGCT+GGG | 0.491383 | 8_2:-18888162 | Msa1238500:intron |
CTGGATCAAACAAAGGGATT+GGG | 0.494569 | 8_2:-18881515 | Msa1238500:CDS |
GAGGCCAGATGGACTACCAT+TGG | 0.500283 | 8_2:+18886681 | None:intergenic |
TTGGTGAATCAGATAGTTGA+AGG | 0.507829 | 8_2:+18887570 | None:intergenic |
ACCGATATAACTGCTAATAC+AGG | 0.514553 | 8_2:-18879487 | Msa1238500:CDS |
GTTAACAATGCTGGGATTAG+CGG | 0.521032 | 8_2:-18881009 | Msa1238500:CDS |
TCTTCAGCAATCATTACGAA+TGG | 0.522469 | 8_2:-18880958 | Msa1238500:CDS |
ATTGTGCAGGTTAACAATGC+TGG | 0.525506 | 8_2:-18881018 | Msa1238500:intron |
TTAGAAACACTCAAAGCCTC+TGG | 0.533721 | 8_2:-18881411 | Msa1238500:CDS |
AGGCCAGATGGACTACCATT+GGG | 0.540042 | 8_2:+18886682 | None:intergenic |
GATGATACATTGACTACTCT+CGG | 0.543757 | 8_2:+18880102 | None:intergenic |
CACTAAACTAATCATGACAA+AGG | 0.543900 | 8_2:-18888104 | Msa1238500:CDS |
CTTTGCAGTAATTCTTGTGT+AGG | 0.546772 | 8_2:+18886828 | None:intergenic |
TAGGTTAACAATGCTGGGAT+TGG | 0.549637 | 8_2:-18888157 | Msa1238500:CDS |
CATTCAAATAAATTATTATG+GGG | 0.549783 | 8_2:-18887624 | Msa1238500:CDS |
TGGCTATAGAAGAGGCCAGA+TGG | 0.551063 | 8_2:+18886670 | None:intergenic |
TGGGAGGAGAACATTCTGTC+AGG | 0.551252 | 8_2:-18884377 | Msa1238500:intron |
GAATCAGATAGTTGAAGGAG+GGG | 0.553764 | 8_2:+18887575 | None:intergenic |
ACTGCAAGAAATGAGAAAAG+AGG | 0.559420 | 8_2:-18889115 | Msa1238500:CDS |
CTTTATTCTGGCTATAGAAG+AGG | 0.560530 | 8_2:+18886662 | None:intergenic |
ACAGCAAGAGATGAGAAAAG+AGG | 0.563297 | 8_2:-18881444 | Msa1238500:CDS |
GGTTTCTTAACAGTAGAAGA+AGG | 0.564561 | 8_2:-18886736 | Msa1238500:CDS |
GTCAATGTATCATCGAGAGC+AGG | 0.564594 | 8_2:-18887542 | Msa1238500:CDS |
TGAATCAGATAGTTGAAGGA+GGG | 0.569558 | 8_2:+18887574 | None:intergenic |
CAAATTTAACTAAAGATGGG+AGG | 0.571090 | 8_2:-18884393 | Msa1238500:intron |
GGTATCTTCACAGCAGAAGA+AGG | 0.571933 | 8_2:-18879466 | Msa1238500:CDS |
TTGTGCAGGTTAACAATGCT+GGG | 0.573954 | 8_2:-18881017 | Msa1238500:intron |
TGGTGACTGGATCAAACAAA+GGG | 0.587027 | 8_2:-18881521 | Msa1238500:CDS |
AGATGGAAGAATATACAGAA+AGG | 0.592841 | 8_2:-18889330 | Msa1238500:intron |
TTCAGCAATCATTACGAATG+GGG | 0.595787 | 8_2:-18880956 | Msa1238500:intron |
TGTCTGATGAAGAAATGAGA+AGG | 0.604852 | 8_2:-18880233 | Msa1238500:CDS |
ATCTGATGAAGAATCGAGAA+GGG | 0.610949 | 8_2:-18887681 | Msa1238500:CDS |
CTAAACTAATCATGACAAAG+GGG | 0.614957 | 8_2:-18888102 | Msa1238500:CDS |
ATATAGGCAGTTGCAAACCT+AGG | 0.615064 | 8_2:+18879604 | None:intergenic |
TCTCTTCCTCAGGTATGCAG+TGG | 0.615906 | 8_2:-18889212 | Msa1238500:intron |
GTCTGATGAAGAAATGAGAA+GGG | 0.616433 | 8_2:-18880232 | Msa1238500:CDS |
GTATCAAATGAATGGGCCAA+AGG | 0.616546 | 8_2:-18887000 | Msa1238500:CDS |
AGGTTAGCACTCCTTCCCAA+TGG | 0.621000 | 8_2:-18879427 | Msa1238500:intron |
TATCTGATGAAGAATCGAGA+AGG | 0.629789 | 8_2:-18887682 | Msa1238500:CDS |
AGGTTAGCACTACTTCCCAA+TGG | 0.631533 | 8_2:-18886697 | Msa1238500:CDS |
CAGATGCACTACCATTGGGA+AGG | 0.640409 | 8_2:+18879416 | None:intergenic |
GTGAATCAGATAGTTGAAGG+AGG | 0.640969 | 8_2:+18887573 | None:intergenic |
GTGGTGACTGGATCAAACAA+AGG | 0.640993 | 8_2:-18881522 | Msa1238500:CDS |
GTCACAGAAGAATTTGCGTG+TGG | 0.643080 | 8_2:-18889406 | Msa1238500:CDS |
ATCGAGAGCAGGCACGATGG+AGG | 0.645992 | 8_2:-18887531 | Msa1238500:intron |
AACAAAATCAGATAAACCAG+AGG | 0.662079 | 8_2:+18889066 | None:intergenic |
GTGGTGACTGGAGCAAACAA+AGG | 0.662474 | 8_2:-18889193 | Msa1238500:CDS |
AGCTTCAGCTGGAATCAAAG+TGG | 0.664366 | 8_2:-18889143 | Msa1238500:CDS |
TGCAAGTGTAGCTTCTCTGG+CGG | 0.669030 | 8_2:-18889014 | Msa1238500:CDS |
AACAAAGTCAGAAAGACCAG+AGG | 0.675722 | 8_2:+18881395 | None:intergenic |
TGTTGCTGATGCTTCAAGTG+TGG | 0.681007 | 8_2:-18881355 | Msa1238500:CDS |
ATCATCGAGAGCAGGCACGA+TGG | 0.681338 | 8_2:-18887534 | Msa1238500:CDS |
TAAACTAATCATGACAAAGG+GGG | 0.699761 | 8_2:-18888101 | Msa1238500:intron |
GGTGGAATTGAAATCAACGA+CGG | 0.720856 | 8_2:-18888136 | Msa1238500:CDS |
TAAGGTGTGCAGGTATGCAG+TGG | 0.743759 | 8_2:-18881541 | Msa1238500:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTTTTAAATTTTTAT+AGG | - | chr8_2:18881461-18881480 | Msa1238500:CDS | 0.0% |
!! | AATTTAAAAAATTATAAAAA+AGG | + | chr8_2:18885680-18885699 | None:intergenic | 0.0% |
!!! | AAAATATTTTATAAAAATTA+TGG | + | chr8_2:18885777-18885796 | None:intergenic | 0.0% |
!!! | TTCTAATTTTACTAAATTAT+TGG | + | chr8_2:18881368-18881387 | None:intergenic | 10.0% |
!!! | TTTTTGTTTTTTTTTTTTGA+AGG | - | chr8_2:18882738-18882757 | Msa1238500:intron | 10.0% |
!! | GTATTTAAAAATTATAATAC+AGG | - | chr8_2:18883109-18883128 | Msa1238500:intron | 10.0% |
!!! | TATTTTTTTTTTTTTTACAG+TGG | + | chr8_2:18883149-18883168 | None:intergenic | 10.0% |
!! | TTTGTTAAAAAAAATAAATG+TGG | - | chr8_2:18883942-18883961 | Msa1238500:intron | 10.0% |
!! | TTTGTTAAAAAAAATAAATG+TGG | - | chr8_2:18883942-18883961 | Msa1238500:intron | 10.0% |
!! | AATAAAATAATTTAGATGAA+TGG | - | chr8_2:18884748-18884767 | Msa1238500:intron | 10.0% |
!! | AAAAACAGAATAAAATAATT+CGG | - | chr8_2:18884817-18884836 | Msa1238500:intron | 10.0% |
!! | TAAATTTCAAAATACAAAAA+AGG | + | chr8_2:18885907-18885926 | None:intergenic | 10.0% |
!!! | AATTTTGAAAATAAAATTTC+CGG | - | chr8_2:18886002-18886021 | Msa1238500:intron | 10.0% |
!!! | TAAAAAAATCGTAAAAATTT+TGG | - | chr8_2:18886027-18886046 | Msa1238500:intron | 10.0% |
!!! | ATAGGATATTTTAAAAAAAA+GGG | + | chr8_2:18886410-18886429 | None:intergenic | 10.0% |
!!! | AATAGGATATTTTAAAAAAA+AGG | + | chr8_2:18886411-18886430 | None:intergenic | 10.0% |
!!! | ATAAGCTATTTTTATATAAA+AGG | + | chr8_2:18886602-18886621 | None:intergenic | 10.0% |
!!! | TCATTTTGATTAATATTATT+TGG | - | chr8_2:18889227-18889246 | Msa1238500:intron | 10.0% |
!! | ATCTATAAGATTTAAAAACA+TGG | + | chr8_2:18879341-18879360 | None:intergenic | 15.0% |
!! | AAAATGAAAACATGATAAAA+TGG | - | chr8_2:18880214-18880233 | Msa1238500:CDS | 15.0% |
!! | AAATGAAAACATGATAAAAT+GGG | - | chr8_2:18880215-18880234 | Msa1238500:CDS | 15.0% |
!! | AAAATCTTTATAAGTTTAGT+GGG | + | chr8_2:18880641-18880660 | None:intergenic | 15.0% |
!! | AAAAATCTTTATAAGTTTAG+TGG | + | chr8_2:18880642-18880661 | None:intergenic | 15.0% |
!! | TGCATTCAAATAAATTATTA+TGG | - | chr8_2:18880965-18880984 | Msa1238500:CDS | 15.0% |
!! | GCATTCAAATAAATTATTAT+GGG | - | chr8_2:18880966-18880985 | Msa1238500:CDS | 15.0% |
!! | CATTCAAATAAATTATTATG+GGG | - | chr8_2:18880967-18880986 | Msa1238500:CDS | 15.0% |
!! | AAAATGAAATAACTTTATTC+TGG | + | chr8_2:18881944-18881963 | None:intergenic | 15.0% |
!!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr8_2:18882054-18882073 | Msa1238500:intron | 15.0% |
!!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr8_2:18882055-18882074 | Msa1238500:intron | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | - | chr8_2:18882119-18882138 | Msa1238500:intron | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | - | chr8_2:18882120-18882139 | Msa1238500:intron | 15.0% |
!!! | ATTTGATATATTCTAAAACT+AGG | - | chr8_2:18882340-18882359 | Msa1238500:intron | 15.0% |
!!! | TTGTATTTTAAATCACATAT+GGG | + | chr8_2:18882574-18882593 | None:intergenic | 15.0% |
!!! | ATTGTATTTTAAATCACATA+TGG | + | chr8_2:18882575-18882594 | None:intergenic | 15.0% |
!! | TACAAATATTACCAAATATA+CGG | - | chr8_2:18882680-18882699 | Msa1238500:intron | 15.0% |
!!! | TTTTCTTTATAGAATGATTT+TGG | - | chr8_2:18883905-18883924 | Msa1238500:intron | 15.0% |
!!! | TTTCTTTATAGAATGATTTT+GGG | - | chr8_2:18883906-18883925 | Msa1238500:intron | 15.0% |
!!! | TTATTTTTTTTAACAAACCA+TGG | + | chr8_2:18883939-18883958 | None:intergenic | 15.0% |
!!! | TTATTTTTTTTAACAAACCA+TGG | + | chr8_2:18883939-18883958 | None:intergenic | 15.0% |
!!! | TCTGTTTTTGTTTTTTTTTT+GGG | + | chr8_2:18884806-18884825 | None:intergenic | 15.0% |
!!! | TTCTGTTTTTGTTTTTTTTT+TGG | + | chr8_2:18884807-18884826 | None:intergenic | 15.0% |
!! | AAAATAATAAAAAGATGGAT+AGG | + | chr8_2:18884956-18884975 | None:intergenic | 15.0% |
!! | TTTAATAATAATATCTGATG+TGG | + | chr8_2:18885212-18885231 | None:intergenic | 15.0% |
!! | TTTATTATCAAAGAATTTCT+AGG | - | chr8_2:18885350-18885369 | Msa1238500:intron | 15.0% |
!!! | GAAAACTTTTTTTAAAAATC+TGG | + | chr8_2:18885581-18885600 | None:intergenic | 15.0% |
!!! | TTTTTTCGAAAATAAATTTC+TGG | - | chr8_2:18885706-18885725 | Msa1238500:intron | 15.0% |
!!! | TAAATTTCTGGAAAAAATTT+AGG | - | chr8_2:18885718-18885737 | Msa1238500:intron | 15.0% |
!! | ATTAAAATATTGGAAAAAGT+TGG | - | chr8_2:18885802-18885821 | Msa1238500:intron | 15.0% |
!!! | TTTTTACGATTTTTTTATTC+CGG | + | chr8_2:18886024-18886043 | None:intergenic | 15.0% |
!! | TTTAATAATAATATATGACG+TGG | - | chr8_2:18886196-18886215 | Msa1238500:intron | 15.0% |
!!! | AGGAAAAAATTTTTTTTACA+AGG | - | chr8_2:18886307-18886326 | Msa1238500:intron | 15.0% |
!!! | GGAAAAAATTTTTTTTACAA+GGG | - | chr8_2:18886308-18886327 | Msa1238500:intron | 15.0% |
!!! | TAAGTCAATTTATTTTGTAA+TGG | + | chr8_2:18888600-18888619 | None:intergenic | 15.0% |
!! | AAACTAAATAACAAAGTATA+TGG | + | chr8_2:18888791-18888810 | None:intergenic | 15.0% |
!! | ATAAGATTTAAAAACATGGT+TGG | + | chr8_2:18879337-18879356 | None:intergenic | 20.0% |
!!! | CAATTTTTAAATCATGCAAA+TGG | + | chr8_2:18879852-18879871 | None:intergenic | 20.0% |
!! | ATACATTCTTATCAAAAATG+TGG | + | chr8_2:18880673-18880692 | None:intergenic | 20.0% |
!! | ATATTCGTCAAAAAATGTAA+TGG | + | chr8_2:18881150-18881169 | None:intergenic | 20.0% |
!! | TTGTGCTGAAAATAAAAAAT+AGG | + | chr8_2:18881261-18881280 | None:intergenic | 20.0% |
!!! | AATATTGACCATATTTTCAT+TGG | - | chr8_2:18881338-18881357 | Msa1238500:CDS | 20.0% |
!!! | TGTTTTTAGAAGTTTTGATA+TGG | - | chr8_2:18881430-18881449 | Msa1238500:CDS | 20.0% |
!!! | TTTATCAAAGATTTTGAAGA+AGG | - | chr8_2:18881672-18881691 | Msa1238500:intron | 20.0% |
!!! | TTATCAAAGATTTTGAAGAA+GGG | - | chr8_2:18881673-18881692 | Msa1238500:intron | 20.0% |
!!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr8_2:18882056-18882075 | Msa1238500:intron | 20.0% |
!! | AAAGTGGAATATATTGTATT+GGG | - | chr8_2:18882079-18882098 | Msa1238500:intron | 20.0% |
!! | AGTTGTATTGAAAATTGAAA+TGG | - | chr8_2:18882152-18882171 | Msa1238500:intron | 20.0% |
!! | GTTGTATTGAAAATTGAAAT+GGG | - | chr8_2:18882153-18882172 | Msa1238500:intron | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8_2:18882189-18882208 | Msa1238500:intron | 20.0% |
!! | TGACAATCATGATTTATTAA+CGG | + | chr8_2:18882266-18882285 | None:intergenic | 20.0% |
!! | TTAATAAATCATGATTGTCA+AGG | - | chr8_2:18882266-18882285 | Msa1238500:intron | 20.0% |
!! | ATATATCAAATTTAGCATGT+AGG | + | chr8_2:18882331-18882350 | None:intergenic | 20.0% |
!!! | TATTCTAAAACTAGGAATTT+AGG | - | chr8_2:18882348-18882367 | Msa1238500:intron | 20.0% |
!!! | ATTCTAAAACTAGGAATTTA+GGG | - | chr8_2:18882349-18882368 | Msa1238500:intron | 20.0% |
!! | CAATATAGAAAAGTTATAGT+TGG | + | chr8_2:18882546-18882565 | None:intergenic | 20.0% |
!! | AGTACATGTAACATAATTAA+CGG | - | chr8_2:18882891-18882910 | Msa1238500:intron | 20.0% |
!! | ATTATAATACAGGTCAATTA+TGG | - | chr8_2:18883119-18883138 | Msa1238500:intron | 20.0% |
!! | TTATAATACAGGTCAATTAT+GGG | - | chr8_2:18883120-18883139 | Msa1238500:intron | 20.0% |
!! | TAAAATTTCTCTGTTTCAAT+TGG | + | chr8_2:18883221-18883240 | None:intergenic | 20.0% |
!!! | TGAAACAGAGAAATTTTAAA+TGG | - | chr8_2:18883223-18883242 | Msa1238500:intron | 20.0% |
!! | GTTAAAAAAAATAAATGTGG+AGG | - | chr8_2:18883945-18883964 | Msa1238500:intron | 20.0% |
!! | GTTAAAAAAAATAAATGTGG+AGG | - | chr8_2:18883945-18883964 | Msa1238500:intron | 20.0% |
!! | TTTCCAAATTTAACTAAAGA+TGG | - | chr8_2:18884194-18884213 | Msa1238500:intron | 20.0% |
!! | TTCCAAATTTAACTAAAGAT+GGG | - | chr8_2:18884195-18884214 | Msa1238500:intron | 20.0% |
!!! | TAGATATCCATTTTTTGATA+TGG | - | chr8_2:18884380-18884399 | Msa1238500:CDS | 20.0% |
!!! | ATTCCCTTTTATATTGTTAT+AGG | - | chr8_2:18884853-18884872 | Msa1238500:intron | 20.0% |
!!! | TTATGAAGATTTTACGATTT+TGG | + | chr8_2:18885515-18885534 | None:intergenic | 20.0% |
!! | TTAAAATATCCTATTTCGAT+TGG | - | chr8_2:18886416-18886435 | Msa1238500:intron | 20.0% |
!!! | TTATTTTCGCTAAAAAAAAG+AGG | + | chr8_2:18886691-18886710 | None:intergenic | 20.0% |
!!! | TTTTTTTAGCGAAAATAAGT+TGG | - | chr8_2:18886693-18886712 | Msa1238500:CDS | 20.0% |
!! | ATTTGAATATACCATCAATT+TGG | - | chr8_2:18886776-18886795 | Msa1238500:CDS | 20.0% |
!! | CTAAATTGGAAAGATAATAT+TGG | + | chr8_2:18886811-18886830 | None:intergenic | 20.0% |
!!! | TATTTTAACGACTAAATTGA+CGG | + | chr8_2:18886847-18886866 | None:intergenic | 20.0% |
!! | TCTTTAACATTCTAATAGTA+TGG | - | chr8_2:18886888-18886907 | Msa1238500:intron | 20.0% |
!! | TATAAGTTATAAGTTTGTCT+TGG | - | chr8_2:18886985-18887004 | Msa1238500:CDS | 20.0% |
!! | TTAGATATGTTAAAAAAAGG+CGG | + | chr8_2:18887033-18887052 | None:intergenic | 20.0% |
!! | ACCTTAGATATGTTAAAAAA+AGG | + | chr8_2:18887036-18887055 | None:intergenic | 20.0% |
!!! | AAAATCAATGCTTTTACTTT+CGG | + | chr8_2:18888135-18888154 | None:intergenic | 20.0% |
!!! | TTTATGACAGATATTTTTGT+TGG | - | chr8_2:18888290-18888309 | Msa1238500:intron | 20.0% |
!!! | ATAGAAGAATTTCAATTTTC+TGG | + | chr8_2:18888640-18888659 | None:intergenic | 20.0% |
!!! | TTTCTAGTAAAAGTAGATAA+TGG | - | chr8_2:18888733-18888752 | Msa1238500:intron | 20.0% |
!!! | TTTATCAAAGATTTTGAAGA+AGG | - | chr8_2:18881672-18881691 | Msa1238500:intron | 20.0% |
!!! | TTTTGCAATAATTCTTGTAT+AGG | + | chr8_2:18889036-18889055 | None:intergenic | 20.0% |
!!! | TTCCTTTTATGAATTTCTTA+AGG | - | chr8_2:18889355-18889374 | Msa1238500:CDS | 20.0% |
! | TATATTCTTCCATCTTTAGT+TGG | + | chr8_2:18879256-18879275 | None:intergenic | 25.0% |
!! | GATTTTGTCAAATCTCAATT+TGG | - | chr8_2:18879599-18879618 | Msa1238500:CDS | 25.0% |
! | TAACACTGAATTAAATGTCA+AGG | + | chr8_2:18879645-18879664 | None:intergenic | 25.0% |
!!! | GTCTTTTTTCAATCTTCTTT+AGG | - | chr8_2:18879881-18879900 | Msa1238500:intron | 25.0% |
!!! | GGTTTTTTTCATCAAAGTTA+GGG | + | chr8_2:18880046-18880065 | None:intergenic | 25.0% |
!!! | AGGTTTTTTTCATCAAAGTT+AGG | + | chr8_2:18880047-18880066 | None:intergenic | 25.0% |
!!! | TTTTTCCTGATATTTAAAGC+CGG | - | chr8_2:18880097-18880116 | Msa1238500:CDS | 25.0% |
! | ACTAAACTAATCATGACAAA+GGG | - | chr8_2:18880488-18880507 | Msa1238500:intron | 25.0% |
! | GTTCAAAATGATCAAGATAA+TGG | + | chr8_2:18880551-18880570 | None:intergenic | 25.0% |
!!! | TTGAAATTTGGTGTTTTGAT+TGG | + | chr8_2:18880615-18880634 | None:intergenic | 25.0% |
! | TTTAGTGGGATATTGAAATT+TGG | + | chr8_2:18880627-18880646 | None:intergenic | 25.0% |
! | TTCTTATCAAAAATGTGGTT+TGG | + | chr8_2:18880668-18880687 | None:intergenic | 25.0% |
! | GTAAAAGTTTATACTAGACT+TGG | - | chr8_2:18881296-18881315 | Msa1238500:intron | 25.0% |
! | TTGGTATACCAATGAAAATA+TGG | + | chr8_2:18881349-18881368 | None:intergenic | 25.0% |
! | GCTAATGCAAATTTAGTTAA+AGG | + | chr8_2:18881537-18881556 | None:intergenic | 25.0% |
! | ATCAGTATGTATCAAATGAA+TGG | - | chr8_2:18881583-18881602 | Msa1238500:intron | 25.0% |
! | TCAGTATGTATCAAATGAAT+GGG | - | chr8_2:18881584-18881603 | Msa1238500:intron | 25.0% |
! | GAGAATAGATGAAGTAATAA+AGG | - | chr8_2:18881647-18881666 | Msa1238500:intron | 25.0% |
! | ACCAGTATTAGCATTTATAT+CGG | + | chr8_2:18881838-18881857 | None:intergenic | 25.0% |
! | GAAAGTGGAATATATTGTAT+TGG | - | chr8_2:18882078-18882097 | Msa1238500:intron | 25.0% |
!!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8_2:18882188-18882207 | Msa1238500:intron | 25.0% |
! | CGTTATAAGAAATTTAACAG+AGG | + | chr8_2:18882393-18882412 | None:intergenic | 25.0% |
!! | TCTTATAACGTTTGAAACTA+AGG | - | chr8_2:18882403-18882422 | Msa1238500:intron | 25.0% |
! | ACAAATTAATGCCGTATATT+TGG | + | chr8_2:18882694-18882713 | None:intergenic | 25.0% |
! | CTTTAAATCATGATTCATCA+TGG | + | chr8_2:18882826-18882845 | None:intergenic | 25.0% |
! | TCTGTTTCAATTGGAATTAT+CGG | + | chr8_2:18883212-18883231 | None:intergenic | 25.0% |
!!! | TGTGGTTTTAGAATGATTTT+GGG | - | chr8_2:18883995-18884014 | Msa1238500:intron | 25.0% |
!! | GAATTTTCTAACGAGAAATT+TGG | + | chr8_2:18884354-18884373 | None:intergenic | 25.0% |
! | ATGAGCACAAAAATCTTAAA+TGG | + | chr8_2:18884502-18884521 | None:intergenic | 25.0% |
!! | TTAAGATTTTTGTGCTCATT+AGG | - | chr8_2:18884503-18884522 | Msa1238500:intron | 25.0% |
! | CCTCCTATAACAATATAAAA+GGG | + | chr8_2:18884859-18884878 | None:intergenic | 25.0% |
!!! | CCGGAATTTTTTTTTTGTAA+GGG | + | chr8_2:18885065-18885084 | None:intergenic | 25.0% |
! | CCCTTACAAAAAAAAAATTC+CGG | - | chr8_2:18885062-18885081 | Msa1238500:intron | 25.0% |
!!! | TCCGGAATTTTTTTTTTGTA+AGG | + | chr8_2:18885066-18885085 | None:intergenic | 25.0% |
!! | AAAAGTTTTCCGAAAAGTTT+TGG | - | chr8_2:18885591-18885610 | Msa1238500:intron | 25.0% |
!! | TTGTAAAAACTTTTCGAATC+TGG | + | chr8_2:18885634-18885653 | None:intergenic | 25.0% |
! | ATTAGACCGAAAATTTCATA+AGG | - | chr8_2:18886336-18886355 | Msa1238500:intron | 25.0% |
! | TTAGACCGAAAATTTCATAA+GGG | - | chr8_2:18886337-18886356 | Msa1238500:intron | 25.0% |
!! | TTTCACCCTTATGAAATTTT+CGG | + | chr8_2:18885028-18885047 | None:intergenic | 25.0% |
!! | CAATTTTCACAAACTCTTTT+CGG | - | chr8_2:18886510-18886529 | Msa1238500:intron | 25.0% |
!! | ATGATAACATGGAACTTTTA+GGG | + | chr8_2:18886728-18886747 | None:intergenic | 25.0% |
! | CATTAGATATAGAAGAATAG+GGG | + | chr8_2:18886751-18886770 | None:intergenic | 25.0% |
! | GCATTAGATATAGAAGAATA+GGG | + | chr8_2:18886752-18886771 | None:intergenic | 25.0% |
! | AGCATTAGATATAGAAGAAT+AGG | + | chr8_2:18886753-18886772 | None:intergenic | 25.0% |
!!! | GGAAAGATAATATTGGTTTA+GGG | + | chr8_2:18886804-18886823 | None:intergenic | 25.0% |
!!! | TGGAAAGATAATATTGGTTT+AGG | + | chr8_2:18886805-18886824 | None:intergenic | 25.0% |
!! | GATTTCATTATGGACTAAAT+TGG | + | chr8_2:18886825-18886844 | None:intergenic | 25.0% |
!!! | TAAATTGACGGATTTCATTA+TGG | + | chr8_2:18886835-18886854 | None:intergenic | 25.0% |
!!! | GCCTTTTTTTAACATATCTA+AGG | - | chr8_2:18887032-18887051 | Msa1238500:intron | 25.0% |
!! | CATTTTGTCAAATCACAATT+TGG | - | chr8_2:18887270-18887289 | Msa1238500:intron | 25.0% |
! | TTTAAAGAAAGTTATCAAGC+TGG | + | chr8_2:18887483-18887502 | None:intergenic | 25.0% |
! | AAAGTGTATCAACTCTAATA+AGG | + | chr8_2:18887519-18887538 | None:intergenic | 25.0% |
! | ATATGTTTATTTGTGGAGTA+TGG | - | chr8_2:18887928-18887947 | Msa1238500:intron | 25.0% |
!!! | TCAGTTTTTAGAAATTTCAC+TGG | - | chr8_2:18888095-18888114 | Msa1238500:intron | 25.0% |
!! | AGTCAATGTATCATCATTTT+TGG | - | chr8_2:18888497-18888516 | Msa1238500:intron | 25.0% |
!!! | GTCAATGTATCATCATTTTT+GGG | - | chr8_2:18888498-18888517 | Msa1238500:intron | 25.0% |
! | TGGTTAACATTTGAGTAATT+TGG | + | chr8_2:18888771-18888790 | None:intergenic | 25.0% |
!! | CATCTATTCTTTCTTTTGTA+AGG | + | chr8_2:18888908-18888927 | None:intergenic | 25.0% |
! | AGTGTTAATAAGTGTTTGTA+GGG | - | chr8_2:18889250-18889269 | Msa1238500:intron | 25.0% |
! | TGCCTTAAGAAATTCATAAA+AGG | + | chr8_2:18889360-18889379 | None:intergenic | 25.0% |
! | AGAGAGATATTTTCTTCTCT+TGG | + | chr8_2:18879224-18879243 | None:intergenic | 30.0% |
AGATGGAAGAATATACAGAA+AGG | - | chr8_2:18879261-18879280 | Msa1238500:intron | 30.0% | |
AACAAAATCAGATAAACCAG+AGG | + | chr8_2:18879528-18879547 | None:intergenic | 30.0% | |
ATTTGGCAAACTTGATATTC+TGG | - | chr8_2:18879616-18879635 | Msa1238500:CDS | 30.0% | |
!!! | TCCTATTTTTACAACATCTG+AGG | - | chr8_2:18879765-18879784 | Msa1238500:intron | 30.0% |
TCCTCAGATGTTGTAAAAAT+AGG | + | chr8_2:18879769-18879788 | None:intergenic | 30.0% | |
CAACATCTGAGGATTAAAAA+TGG | - | chr8_2:18879776-18879795 | Msa1238500:intron | 30.0% | |
ACAATACCTCATAAAAAGGA+GGG | + | chr8_2:18879946-18879965 | None:intergenic | 30.0% | |
TACAATACCTCATAAAAAGG+AGG | + | chr8_2:18879947-18879966 | None:intergenic | 30.0% | |
GTCTACAATACCTCATAAAA+AGG | + | chr8_2:18879950-18879969 | None:intergenic | 30.0% | |
GAAAAAAACCTACTTTCATC+TGG | - | chr8_2:18880056-18880075 | Msa1238500:intron | 30.0% | |
!! | TTTTCCTGATATTTAAAGCC+GGG | - | chr8_2:18880098-18880117 | Msa1238500:CDS | 30.0% |
! | TCATGTTTTCATTTTCCATG+CGG | + | chr8_2:18880209-18880228 | None:intergenic | 30.0% |
! | AACATGATAAAATGGGTTTG+AGG | - | chr8_2:18880222-18880241 | Msa1238500:CDS | 30.0% |
! | ATAAAATGGGTTTGAGGATT+GGG | - | chr8_2:18880228-18880247 | Msa1238500:CDS | 30.0% |
! | CATGGCATTTTATATGACTA+GGG | + | chr8_2:18880291-18880310 | None:intergenic | 30.0% |
! | ACATGGCATTTTATATGACT+AGG | + | chr8_2:18880292-18880311 | None:intergenic | 30.0% |
TAAATCTACGAAATGCAACA+TGG | + | chr8_2:18880309-18880328 | None:intergenic | 30.0% | |
AGAAACTTGTAATGACAACT+AGG | + | chr8_2:18880352-18880371 | None:intergenic | 30.0% | |
GAACAAAGATTGTATTGCAT+AGG | - | chr8_2:18880415-18880434 | Msa1238500:intron | 30.0% | |
CACTAAACTAATCATGACAA+AGG | - | chr8_2:18880487-18880506 | Msa1238500:intron | 30.0% | |
CTAAACTAATCATGACAAAG+GGG | - | chr8_2:18880489-18880508 | Msa1238500:intron | 30.0% | |
TAAACTAATCATGACAAAGG+GGG | - | chr8_2:18880490-18880509 | Msa1238500:intron | 30.0% | |
ATGGACGAGATAAATAACAA+GGG | + | chr8_2:18880532-18880551 | None:intergenic | 30.0% | |
AATGGACGAGATAAATAACA+AGG | + | chr8_2:18880533-18880552 | None:intergenic | 30.0% | |
! | ATCCTGAAATTTGAAACTAG+TGG | - | chr8_2:18880691-18880710 | Msa1238500:intron | 30.0% |
! | TCCTGAAATTTGAAACTAGT+GGG | - | chr8_2:18880692-18880711 | Msa1238500:intron | 30.0% |
! | TTTTATGTAGTGAGGTAGTT+TGG | + | chr8_2:18880727-18880746 | None:intergenic | 30.0% |
! | CATGACAATTTTATGTAGTG+AGG | + | chr8_2:18880735-18880754 | None:intergenic | 30.0% |
! | TCTTGTGAAATTTGAAACTG+TGG | - | chr8_2:18880783-18880802 | Msa1238500:intron | 30.0% |
TATGTTAACTGTGTCAAAAC+TGG | - | chr8_2:18880827-18880846 | Msa1238500:intron | 30.0% | |
! | AGAAGCTTTAGCAACAATAT+AGG | + | chr8_2:18881736-18881755 | None:intergenic | 30.0% |
ACCGATATAAATGCTAATAC+TGG | - | chr8_2:18881834-18881853 | Msa1238500:intron | 30.0% | |
TCAAAGTAGGTCAATTATAC+CGG | + | chr8_2:18882020-18882039 | None:intergenic | 30.0% | |
TCTGTGTGAAAAATCAAAGT+AGG | + | chr8_2:18882033-18882052 | None:intergenic | 30.0% | |
TGTATAAATAAAGGGGAAAG+TGG | - | chr8_2:18882063-18882082 | Msa1238500:intron | 30.0% | |
!!! | TTGAAATGGGTCAGTTTTTT+TGG | - | chr8_2:18882166-18882185 | Msa1238500:intron | 30.0% |
!!! | TGAAATGGGTCAGTTTTTTT+GGG | - | chr8_2:18882167-18882186 | Msa1238500:intron | 30.0% |
! | ATCATGATTGTCAAGGTATT+TGG | - | chr8_2:18882273-18882292 | Msa1238500:intron | 30.0% |
!!! | TATTTGTCACTTGTTTTGTG+AGG | - | chr8_2:18882800-18882819 | Msa1238500:intron | 30.0% |
!!! | CATTTTTTAACCTCTACGAA+TGG | + | chr8_2:18882922-18882941 | None:intergenic | 30.0% |
!! | AGTTCTGAACTTTGTACATT+AGG | - | chr8_2:18882991-18883010 | Msa1238500:intron | 30.0% |
CCAAAAAGCTTCAAATTACA+AGG | + | chr8_2:18883180-18883199 | None:intergenic | 30.0% | |
!! | CCTTGTAATTTGAAGCTTTT+TGG | - | chr8_2:18883177-18883196 | Msa1238500:intron | 30.0% |
AAAGACTCAAATTTATGCGT+TGG | - | chr8_2:18883304-18883323 | Msa1238500:intron | 30.0% | |
!! | TATAGATTTTGACAGCGTAA+GGG | + | chr8_2:18883416-18883435 | None:intergenic | 30.0% |
!!! | TGAAGTTTTGGATAACAAGT+CGG | + | chr8_2:18883633-18883652 | None:intergenic | 30.0% |
! | TAAGTGAGAAGTTGAAGTTT+TGG | + | chr8_2:18883645-18883664 | None:intergenic | 30.0% |
GACTCAAATACGATTTATAG+AGG | + | chr8_2:18883859-18883878 | None:intergenic | 30.0% | |
!! | TGATTTTGGGAAAATATCCA+TGG | - | chr8_2:18883919-18883938 | Msa1238500:intron | 30.0% |
!!! | GTGTGGTTTTAGAATGATTT+TGG | - | chr8_2:18883994-18884013 | Msa1238500:intron | 30.0% |
!! | TGATTTTGGGAAAATATCCA+TGG | - | chr8_2:18883919-18883938 | Msa1238500:intron | 30.0% |
GAAACAAGACAATTTCACAA+AGG | - | chr8_2:18884130-18884149 | Msa1238500:intron | 30.0% | |
AACAAAGAAGAGAAGTTGTT+TGG | - | chr8_2:18884168-18884187 | Msa1238500:intron | 30.0% | |
CTCCCATCTTTAGTTAAATT+TGG | + | chr8_2:18884200-18884219 | None:intergenic | 30.0% | |
CAAATTTAACTAAAGATGGG+AGG | - | chr8_2:18884198-18884217 | Msa1238500:intron | 30.0% | |
TGAGCATCCATATCAAAAAA+TGG | + | chr8_2:18884390-18884409 | None:intergenic | 30.0% | |
! | ATTGGTGTATTTCTACCATT+AGG | - | chr8_2:18884628-18884647 | Msa1238500:intron | 30.0% |
! | GTATTTCTACCATTAGGATT+AGG | - | chr8_2:18884634-18884653 | Msa1238500:intron | 30.0% |
! | CCCTTTTATATTGTTATAGG+AGG | - | chr8_2:18884856-18884875 | Msa1238500:intron | 30.0% |
GCCTCCTATAACAATATAAA+AGG | + | chr8_2:18884860-18884879 | None:intergenic | 30.0% | |
AATTTCATAAGGGTGAAAAC+CGG | + | chr8_2:18886347-18886366 | None:intergenic | 30.0% | |
! | TTCGAAAAGCCAAAACTTTT+CGG | + | chr8_2:18885603-18885622 | None:intergenic | 30.0% |
AATTTCATAAGGGTGAAAAC+CGG | - | chr8_2:18886347-18886366 | Msa1238500:intron | 30.0% | |
TCAAATAAGCCAATCGAAAT+AGG | + | chr8_2:18886428-18886447 | None:intergenic | 30.0% | |
!! | AAGCTGTTTTCATAAGCTAT+TGG | + | chr8_2:18886548-18886567 | None:intergenic | 30.0% |
ATTTGTAGGTTATAGCACAA+AGG | + | chr8_2:18886658-18886677 | None:intergenic | 30.0% | |
!! | CGAAAATAAGTTGGTTACAT+AGG | - | chr8_2:18886702-18886721 | Msa1238500:CDS | 30.0% |
! | GATGATAACATGGAACTTTT+AGG | + | chr8_2:18886729-18886748 | None:intergenic | 30.0% |
GTCCTAGAGTATATAAAACT+CGG | + | chr8_2:18886920-18886939 | None:intergenic | 30.0% | |
TCTATCTTCCATAAGAAAGT+AGG | + | chr8_2:18887340-18887359 | None:intergenic | 30.0% | |
AAGTTATCAAGCTGGTTAAA+TGG | + | chr8_2:18887475-18887494 | None:intergenic | 30.0% | |
ATTCACTTGACACAAAACAT+GGG | + | chr8_2:18887671-18887690 | None:intergenic | 30.0% | |
TATTCACTTGACACAAAACA+TGG | + | chr8_2:18887672-18887691 | None:intergenic | 30.0% | |
TTTCCAATACATATGCATCA+TGG | + | chr8_2:18887733-18887752 | None:intergenic | 30.0% | |
!!! | TTGAAATTTGGTGTTTTGGT+TGG | + | chr8_2:18887774-18887793 | None:intergenic | 30.0% |
!!! | GACATTGAAATTTGGTGTTT+TGG | + | chr8_2:18887778-18887797 | None:intergenic | 30.0% |
! | CATTGACTGACATTGAAATT+TGG | + | chr8_2:18887786-18887805 | None:intergenic | 30.0% |
GATATCTTTGTGTAGCATTA+CGG | - | chr8_2:18887827-18887846 | Msa1238500:intron | 30.0% | |
AAGATCCGTCTTAATTTCTT+TGG | - | chr8_2:18887888-18887907 | Msa1238500:intron | 30.0% | |
CAAGACCAAAGAAATTAAGA+CGG | + | chr8_2:18887896-18887915 | None:intergenic | 30.0% | |
AACACAGTTCAAAATTTCAC+AGG | + | chr8_2:18888226-18888245 | None:intergenic | 30.0% | |
! | TGTGAAATTTTGAACTGTGT+TGG | - | chr8_2:18888225-18888244 | Msa1238500:intron | 30.0% |
GTAACACAAAAATTTGAGTC+AGG | - | chr8_2:18888384-18888403 | Msa1238500:intron | 30.0% | |
ACAAAAATTTGAGTCAGGTA+AGG | - | chr8_2:18888389-18888408 | Msa1238500:intron | 30.0% | |
TGCTTGCAGATAAATTATCA+TGG | - | chr8_2:18888414-18888433 | Msa1238500:intron | 30.0% | |
! | TATCAGTGATAATGCAGATT+TGG | + | chr8_2:18888838-18888857 | None:intergenic | 30.0% |
TGATATTGATGTCAAATGAG+TGG | - | chr8_2:18888853-18888872 | Msa1238500:intron | 30.0% | |
GATATTGATGTCAAATGAGT+GGG | - | chr8_2:18888854-18888873 | Msa1238500:intron | 30.0% | |
GTTCCTTAGAAAGAAAAGTT+TGG | - | chr8_2:18888964-18888983 | Msa1238500:intron | 30.0% | |
! | AGAAGCTTTAGCAACAATAT+AGG | + | chr8_2:18881736-18881755 | None:intergenic | 30.0% |
ACCTGTATTAGCAGTTATAT+CGG | + | chr8_2:18889108-18889127 | None:intergenic | 30.0% | |
AAAATGAAGAGATTCAGTTC+TGG | + | chr8_2:18889214-18889233 | None:intergenic | 30.0% | |
GAGTGTTAATAAGTGTTTGT+AGG | - | chr8_2:18889249-18889268 | Msa1238500:intron | 30.0% | |
! | CAGTTCAAGTCTCATATTTT+AGG | - | chr8_2:18889453-18889472 | Msa1238500:CDS | 30.0% |
! | GAGATATTTTCTTCTCTTGG+AGG | + | chr8_2:18879221-18879240 | None:intergenic | 35.0% |
TGCTAAGTTCCAACTAAAGA+TGG | - | chr8_2:18879244-18879263 | Msa1238500:intron | 35.0% | |
! | TTTAAGACTGCATAGCAAAG+TGG | + | chr8_2:18879309-18879328 | None:intergenic | 35.0% |
ACTGCAAGAAATGAGAAAAG+AGG | - | chr8_2:18879476-18879495 | Msa1238500:CDS | 35.0% | |
AAACCTACTTTCATCTGGTA+TGG | - | chr8_2:18880061-18880080 | Msa1238500:intron | 35.0% | |
AACCTACTTTCATCTGGTAT+GGG | - | chr8_2:18880062-18880081 | Msa1238500:intron | 35.0% | |
! | TTTCCTGATATTTAAAGCCG+GGG | - | chr8_2:18880099-18880118 | Msa1238500:CDS | 35.0% |
! | TTTTCCAAACCAATCGTGAT+CGG | - | chr8_2:18880148-18880167 | Msa1238500:intron | 35.0% |
! | CATGTTTTCATTTTCCATGC+GGG | + | chr8_2:18880208-18880227 | None:intergenic | 35.0% |
! | GATAAAATGGGTTTGAGGAT+TGG | - | chr8_2:18880227-18880246 | Msa1238500:CDS | 35.0% |
ATTGCATAGGTTAACAATGC+TGG | - | chr8_2:18880428-18880447 | Msa1238500:intron | 35.0% | |
TTGCATAGGTTAACAATGCT+GGG | - | chr8_2:18880429-18880448 | Msa1238500:intron | 35.0% | |
! | TCCCACTAGTTTCAAATTTC+AGG | + | chr8_2:18880696-18880715 | None:intergenic | 35.0% |
! | TGTGAAATTTGAAACTGTGG+TGG | - | chr8_2:18880786-18880805 | Msa1238500:intron | 35.0% |
GGTTTGAAGAACTTCGATAA+TGG | - | chr8_2:18880848-18880867 | Msa1238500:intron | 35.0% | |
! | TTGAGTTGTTCTTACTTTGC+AGG | - | chr8_2:18880880-18880899 | Msa1238500:intron | 35.0% |
TATCTGATGAAGAATCGAGA+AGG | - | chr8_2:18880909-18880928 | Msa1238500:intron | 35.0% | |
ATCTGATGAAGAATCGAGAA+GGG | - | chr8_2:18880910-18880929 | Msa1238500:intron | 35.0% | |
TGAATCAGATAGTTGAAGGA+GGG | + | chr8_2:18881020-18881039 | None:intergenic | 35.0% | |
TTGGTGAATCAGATAGTTGA+AGG | + | chr8_2:18881024-18881043 | None:intergenic | 35.0% | |
! | GATGATACATTGACTACTCT+TGG | + | chr8_2:18881043-18881062 | None:intergenic | 35.0% |
CATCTATTCTCTCTTCTGTT+AGG | + | chr8_2:18881638-18881657 | None:intergenic | 35.0% | |
ATATAGGCAGCTATATACCT+AGG | + | chr8_2:18881720-18881739 | None:intergenic | 35.0% | |
CTTTGCAGTAATTCTTGTGT+AGG | + | chr8_2:18881766-18881785 | None:intergenic | 35.0% | |
!!! | TATCGGTTTTGACATAACCA+GGG | + | chr8_2:18881821-18881840 | None:intergenic | 35.0% |
!!! | ATATCGGTTTTGACATAACC+AGG | + | chr8_2:18881822-18881841 | None:intergenic | 35.0% |
GGTTTCTTAACAGTAGAAGA+AGG | - | chr8_2:18881855-18881874 | Msa1238500:intron | 35.0% | |
! | CTTTATTCTGGCTATAGAAG+AGG | + | chr8_2:18881932-18881951 | None:intergenic | 35.0% |
CAAAGTAGGTCAATTATACC+GGG | + | chr8_2:18882019-18882038 | None:intergenic | 35.0% | |
AGAAAATGGGTCAGTTATTC+CGG | - | chr8_2:18882202-18882221 | Msa1238500:intron | 35.0% | |
CTAAAACTAGGAATTTAGGG+AGG | - | chr8_2:18882352-18882371 | Msa1238500:intron | 35.0% | |
GTACTTAGCTAACAACTTAG+TGG | + | chr8_2:18882876-18882895 | None:intergenic | 35.0% | |
! | CGTTGGAATGTTGTTTGATT+TGG | + | chr8_2:18883266-18883285 | None:intergenic | 35.0% |
AGAATCTTAATCCAAGACGT+TGG | + | chr8_2:18883283-18883302 | None:intergenic | 35.0% | |
TCTTCAACTCCTTGAATAGA+GGG | + | chr8_2:18883354-18883373 | None:intergenic | 35.0% | |
!! | CTATAGATTTTGACAGCGTA+AGG | + | chr8_2:18883417-18883436 | None:intergenic | 35.0% |
!! | TTTTGTCACCTTCTAAAGGA+AGG | + | chr8_2:18883554-18883573 | None:intergenic | 35.0% |
TAGAATCAGAAGACTATGAC+TGG | + | chr8_2:18883577-18883596 | None:intergenic | 35.0% | |
ATATATACAGACGAGTGTGT+AGG | + | chr8_2:18884268-18884287 | None:intergenic | 35.0% | |
!!! | GGGTCTCTTATTTTAAGATG+TGG | + | chr8_2:18884576-18884595 | None:intergenic | 35.0% |
AGGATTAGGTCATTGTTCAT+TGG | - | chr8_2:18884610-18884629 | Msa1238500:intron | 35.0% | |
TGACAATGACCTAATCCTAA+TGG | + | chr8_2:18884646-18884665 | None:intergenic | 35.0% | |
CATGGATAACTCTTCTTGAT+GGG | + | chr8_2:18884896-18884915 | None:intergenic | 35.0% | |
ACATGGATAACTCTTCTTGA+TGG | + | chr8_2:18884897-18884916 | None:intergenic | 35.0% | |
AAGTGCTAACAATTTCGACA+TGG | + | chr8_2:18884914-18884933 | None:intergenic | 35.0% | |
ATGTCGAAATTGTTAGCACT+TGG | - | chr8_2:18884913-18884932 | Msa1238500:intron | 35.0% | |
! | TTTTTCACCCCCTGTAATAT+AGG | - | chr8_2:18884994-18885013 | Msa1238500:intron | 35.0% |
GAAATGACCTATATTACAGG+GGG | + | chr8_2:18885004-18885023 | None:intergenic | 35.0% | |
GGAAATGACCTATATTACAG+GGG | + | chr8_2:18885005-18885024 | None:intergenic | 35.0% | |
CGGAAATGACCTATATTACA+GGG | + | chr8_2:18885006-18885025 | None:intergenic | 35.0% | |
CCTGTAATATAGGTCATTTC+CGG | - | chr8_2:18885004-18885023 | Msa1238500:intron | 35.0% | |
!!! | TTTTTTGTAAGGGTGCAAAC+CGG | + | chr8_2:18885055-18885074 | None:intergenic | 35.0% |
CCTGTAATATAAGCCATTTC+CGG | + | chr8_2:18886369-18886388 | None:intergenic | 35.0% | |
CGGAAATGGCTTATATTACA+GGG | - | chr8_2:18886367-18886386 | Msa1238500:intron | 35.0% | |
GGAAATGGCTTATATTACAG+GGG | - | chr8_2:18886368-18886387 | Msa1238500:intron | 35.0% | |
! | ATAAGTTTTGCGAGACTGTT+AGG | - | chr8_2:18886462-18886481 | Msa1238500:intron | 35.0% |
! | TAAGTTTTGCGAGACTGTTA+GGG | - | chr8_2:18886463-18886482 | Msa1238500:intron | 35.0% |
GAGGCAAACAACTTATTTGT+AGG | + | chr8_2:18886672-18886691 | None:intergenic | 35.0% | |
AAGAATAGGGGATGATAACA+TGG | + | chr8_2:18886739-18886758 | None:intergenic | 35.0% | |
!! | CTCCGAGTTTTATATACTCT+AGG | - | chr8_2:18886915-18886934 | Msa1238500:intron | 35.0% |
! | TTAACATATCTAAGGTGTGC+AGG | - | chr8_2:18887040-18887059 | Msa1238500:intron | 35.0% |
ATTTGGCAAACTTGACATTC+TGG | - | chr8_2:18887287-18887306 | Msa1238500:intron | 35.0% | |
TTGCCATACCTACTTTCTTA+TGG | - | chr8_2:18887329-18887348 | Msa1238500:intron | 35.0% | |
CTTCCATAAGAAAGTAGGTA+TGG | + | chr8_2:18887335-18887354 | None:intergenic | 35.0% | |
TCTTATGGAAGATAGAGACA+CGG | - | chr8_2:18887344-18887363 | Msa1238500:intron | 35.0% | |
AAGATAGAGACACGGTAATA+TGG | - | chr8_2:18887352-18887371 | Msa1238500:intron | 35.0% | |
AGATAGAGACACGGTAATAT+GGG | - | chr8_2:18887353-18887372 | Msa1238500:intron | 35.0% | |
! | ACGTGACATTTTATACGACT+GGG | + | chr8_2:18887415-18887434 | None:intergenic | 35.0% |
! | AACGTGACATTTTATACGAC+TGG | + | chr8_2:18887416-18887435 | None:intergenic | 35.0% |
TCTTCAGCAATCATTACGAA+TGG | - | chr8_2:18887633-18887652 | Msa1238500:CDS | 35.0% | |
CTTCAGCAATCATTACGAAT+GGG | - | chr8_2:18887634-18887653 | Msa1238500:CDS | 35.0% | |
TTCAGCAATCATTACGAATG+GGG | - | chr8_2:18887635-18887654 | Msa1238500:CDS | 35.0% | |
CATCCATGATGCATATGTAT+TGG | - | chr8_2:18887727-18887746 | Msa1238500:intron | 35.0% | |
TAAGACGGATCTTCAAAATC+AGG | + | chr8_2:18887881-18887900 | None:intergenic | 35.0% | |
ACAAATAAACATATCACCCG+TGG | + | chr8_2:18887922-18887941 | None:intergenic | 35.0% | |
ACGGGTGATATGTTTATTTG+TGG | - | chr8_2:18887921-18887940 | Msa1238500:intron | 35.0% | |
CATGTACAATGATTGAACGA+TGG | + | chr8_2:18888039-18888058 | None:intergenic | 35.0% | |
! | GCTTTTACTTTCGGATTTGT+GGG | + | chr8_2:18888126-18888145 | None:intergenic | 35.0% |
! | TGCTTTTACTTTCGGATTTG+TGG | + | chr8_2:18888127-18888146 | None:intergenic | 35.0% |
TGTCTGATGAAGAAATGAGA+AGG | - | chr8_2:18888358-18888377 | Msa1238500:intron | 35.0% | |
GTCTGATGAAGAAATGAGAA+GGG | - | chr8_2:18888359-18888378 | Msa1238500:intron | 35.0% | |
! | GATGATACATTGACTACTCT+CGG | + | chr8_2:18881043-18881062 | None:intergenic | 35.0% |
!! | ATCATTTTTGGGCAAGATAC+AGG | - | chr8_2:18888509-18888528 | Msa1238500:intron | 35.0% |
! | CAGATTTGGTCAAAGGAATT+TGG | + | chr8_2:18888824-18888843 | None:intergenic | 35.0% |
! | GATAATGCAGATTTGGTCAA+AGG | + | chr8_2:18888831-18888850 | None:intergenic | 35.0% |
! | AGGCCAAACTTTTCTTTCTA+AGG | + | chr8_2:18888970-18888989 | None:intergenic | 35.0% |
TAGAAAGAAAAGTTTGGCCT+AGG | - | chr8_2:18888970-18888989 | Msa1238500:intron | 35.0% | |
ACACAATTGATGCAGATACT+AGG | + | chr8_2:18889065-18889084 | None:intergenic | 35.0% | |
!!! | ATATCGGTTTTGACATAACC+AGG | + | chr8_2:18881822-18881841 | None:intergenic | 35.0% |
ACCGATATAACTGCTAATAC+AGG | - | chr8_2:18889104-18889123 | Msa1238500:CDS | 35.0% | |
ATGAATCGTAGGACTAACAT+GGG | + | chr8_2:18889385-18889404 | None:intergenic | 35.0% | |
AACTGTCTTAAGCTTGAATC+AGG | + | chr8_2:18889438-18889457 | None:intergenic | 35.0% | |
CGCAAATTCTTCTGTGACTA+AGG | + | chr8_2:18879183-18879202 | None:intergenic | 40.0% | |
ACTGGAGCAAACAAAGGAAT+TGG | - | chr8_2:18879404-18879423 | Msa1238500:intron | 40.0% | |
GAAAAGAGGTCTTCATGCTT+TGG | - | chr8_2:18879490-18879509 | Msa1238500:CDS | 40.0% | |
TTGGAAACACTCAAAACCTC+TGG | - | chr8_2:18879509-18879528 | Msa1238500:CDS | 40.0% | |
AAAACCTCATATTGCCACAG+AGG | - | chr8_2:18879731-18879750 | Msa1238500:intron | 40.0% | |
! | TTTAGGTTCCATTGCAAGTC+AGG | - | chr8_2:18879898-18879917 | Msa1238500:intron | 40.0% |
TTAGGTTCCATTGCAAGTCA+GGG | - | chr8_2:18879899-18879918 | Msa1238500:intron | 40.0% | |
ATACCTCATAAAAAGGAGGG+AGG | + | chr8_2:18879943-18879962 | None:intergenic | 40.0% | |
TCATTACCTTAGCGTGGTAA+TGG | - | chr8_2:18879988-18880007 | Msa1238500:intron | 40.0% | |
CATTACCTTAGCGTGGTAAT+GGG | - | chr8_2:18879989-18880008 | Msa1238500:intron | 40.0% | |
ATCAAAGTTAGGGTGAGTTC+TGG | + | chr8_2:18880036-18880055 | None:intergenic | 40.0% | |
TATCAGGAAAAACTCGAACC+TGG | + | chr8_2:18880089-18880108 | None:intergenic | 40.0% | |
! | TTCCTGATATTTAAAGCCGG+GGG | - | chr8_2:18880100-18880119 | Msa1238500:CDS | 40.0% |
TTTCCAAACCAATCGTGATC+GGG | - | chr8_2:18880149-18880168 | Msa1238500:intron | 40.0% | |
ATGACTAGGGATGACAATGA+GGG | + | chr8_2:18880278-18880297 | None:intergenic | 40.0% | |
TATGACTAGGGATGACAATG+AGG | + | chr8_2:18880279-18880298 | None:intergenic | 40.0% | |
TAGGTTAACAATGCTGGGAT+TGG | - | chr8_2:18880434-18880453 | Msa1238500:intron | 40.0% | |
GGTGGAATTGAAATCAACGA+CGG | - | chr8_2:18880455-18880474 | Msa1238500:intron | 40.0% | |
AACATCCATGATGCATGTAC+TGG | - | chr8_2:18880568-18880587 | Msa1238500:intron | 40.0% | |
ACATCCATGATGCATGTACT+GGG | - | chr8_2:18880569-18880588 | Msa1238500:intron | 40.0% | |
AGTTGTTCTTACTTTGCAGG+CGG | - | chr8_2:18880883-18880902 | Msa1238500:intron | 40.0% | |
GAATCAGATAGTTGAAGGAG+GGG | + | chr8_2:18881019-18881038 | None:intergenic | 40.0% | |
GTGAATCAGATAGTTGAAGG+AGG | + | chr8_2:18881021-18881040 | None:intergenic | 40.0% | |
GTATCAAATGAATGGGCCAA+AGG | - | chr8_2:18881591-18881610 | Msa1238500:intron | 40.0% | |
AACATCACTGAAGACTCCTT+TGG | + | chr8_2:18881610-18881629 | None:intergenic | 40.0% | |
TTGAAGAAGGGTCCTTAGAA+AGG | - | chr8_2:18881685-18881704 | Msa1238500:intron | 40.0% | |
! | ACACAGTTGATGCAGAAGTT+AGG | + | chr8_2:18881795-18881814 | None:intergenic | 40.0% |
GAAAATGGGTCAGTTATTCC+GGG | - | chr8_2:18882203-18882222 | Msa1238500:intron | 40.0% | |
GCATGTAGGAAAGACAACTT+AGG | + | chr8_2:18882317-18882336 | None:intergenic | 40.0% | |
GTGACCATGTAGATAGCTAA+AGG | + | chr8_2:18882953-18882972 | None:intergenic | 40.0% | |
CAAACAACATTCCAACGTCT+TGG | - | chr8_2:18883269-18883288 | Msa1238500:intron | 40.0% | |
CTCAGATTTCCCTCTATTCA+AGG | - | chr8_2:18883342-18883361 | Msa1238500:intron | 40.0% | |
GTCTTCAACTCCTTGAATAG+AGG | + | chr8_2:18883355-18883374 | None:intergenic | 40.0% | |
!!! | CTGGTTTTGTCACCTTCTAA+AGG | + | chr8_2:18883558-18883577 | None:intergenic | 40.0% |
!! | GAAGGTATCCACATGTTGAA+GGG | + | chr8_2:18883605-18883624 | None:intergenic | 40.0% |
!! | TGAAGGTATCCACATGTTGA+AGG | + | chr8_2:18883606-18883625 | None:intergenic | 40.0% |
GATAACAAGTCGGACTTTGA+AGG | + | chr8_2:18883623-18883642 | None:intergenic | 40.0% | |
ATAAATGTGGAGGATAACCG+AGG | - | chr8_2:18883955-18883974 | Msa1238500:intron | 40.0% | |
ATAAATGTGGAGGATAACCG+AGG | - | chr8_2:18883955-18883974 | Msa1238500:intron | 40.0% | |
!! | GTCTTGTTTCTTCTGTTGCT+TGG | + | chr8_2:18884120-18884139 | None:intergenic | 40.0% |
GAGTGTGTAGGATACAAAAG+AGG | + | chr8_2:18884256-18884275 | None:intergenic | 40.0% | |
TTAAAATAAGAGACCCCCCT+TGG | - | chr8_2:18884580-18884599 | Msa1238500:intron | 40.0% | |
TAAAATAAGAGACCCCCCTT+GGG | - | chr8_2:18884581-18884600 | Msa1238500:intron | 40.0% | |
TAATCCTATAATCCCCAAGG+GGG | + | chr8_2:18884597-18884616 | None:intergenic | 40.0% | |
CTAATCCTATAATCCCCAAG+GGG | + | chr8_2:18884598-18884617 | None:intergenic | 40.0% | |
CCTAATCCTATAATCCCCAA+GGG | + | chr8_2:18884599-18884618 | None:intergenic | 40.0% | |
ACCTAATCCTATAATCCCCA+AGG | + | chr8_2:18884600-18884619 | None:intergenic | 40.0% | |
TCGAAATTGTTAGCACTTGG+AGG | - | chr8_2:18884916-18884935 | Msa1238500:intron | 40.0% | |
CCGGAAATGACCTATATTAC+AGG | + | chr8_2:18885007-18885026 | None:intergenic | 40.0% | |
CCGGACGGAAAATTTCATAA+GGG | + | chr8_2:18885036-18885055 | None:intergenic | 40.0% | |
! | CCCTTATGAAATTTTCCGTC+CGG | - | chr8_2:18885033-18885052 | Msa1238500:intron | 40.0% |
ACCGGACGGAAAATTTCATA+AGG | + | chr8_2:18885037-18885056 | None:intergenic | 40.0% | |
ATAAGGGTGAAAACCGGAAA+TGG | - | chr8_2:18886353-18886372 | Msa1238500:intron | 40.0% | |
CCGGAAATGGCTTATATTAC+AGG | - | chr8_2:18886366-18886385 | Msa1238500:intron | 40.0% | |
! | AAGTTTTGCGAGACTGTTAG+GGG | - | chr8_2:18886464-18886483 | Msa1238500:intron | 40.0% |
! | GGTTTAGGGTTCCAAATTGA+TGG | + | chr8_2:18886790-18886809 | None:intergenic | 40.0% |
TGGTGACTGGATCAAACAAA+GGG | - | chr8_2:18887070-18887089 | Msa1238500:intron | 40.0% | |
ACTGGATCAAACAAAGGGAT+TGG | - | chr8_2:18887075-18887094 | Msa1238500:intron | 40.0% | |
CTGGATCAAACAAAGGGATT+GGG | - | chr8_2:18887076-18887095 | Msa1238500:intron | 40.0% | |
! | GGATTGGGTTAGAGATAGTA+AGG | - | chr8_2:18887091-18887110 | Msa1238500:intron | 40.0% |
ACAGCAAGAGATGAGAAAAG+AGG | - | chr8_2:18887147-18887166 | Msa1238500:intron | 40.0% | |
TTAGAAACACTCAAAGCCTC+TGG | - | chr8_2:18887180-18887199 | Msa1238500:intron | 40.0% | |
AACAAAGTCAGAAAGACCAG+AGG | + | chr8_2:18887199-18887218 | None:intergenic | 40.0% | |
GGTAATATGGGTTTGAGGAT+CGG | - | chr8_2:18887365-18887384 | Msa1238500:intron | 40.0% | |
GTAATATGGGTTTGAGGATC+GGG | - | chr8_2:18887366-18887385 | Msa1238500:intron | 40.0% | |
! | CGTGACATTTTATACGACTG+GGG | + | chr8_2:18887414-18887433 | None:intergenic | 40.0% |
ATTGTGCAGGTTAACAATGC+TGG | - | chr8_2:18887573-18887592 | Msa1238500:CDS | 40.0% | |
TTGTGCAGGTTAACAATGCT+GGG | - | chr8_2:18887574-18887593 | Msa1238500:CDS | 40.0% | |
GTTAACAATGCTGGGATTAG+CGG | - | chr8_2:18887582-18887601 | Msa1238500:CDS | 40.0% | |
GGAGTATGGATTCTCAATAG+TGG | - | chr8_2:18887942-18887961 | Msa1238500:intron | 40.0% | |
ACCAATTCAAGTGGTTGCAT+TGG | - | chr8_2:18887969-18887988 | Msa1238500:intron | 40.0% | |
ACCAATGCAACCACTTGAAT+TGG | + | chr8_2:18887973-18887992 | None:intergenic | 40.0% | |
TTGGTGCATTTGAAAACCGT+TGG | - | chr8_2:18887988-18888007 | Msa1238500:intron | 40.0% | |
CGTTGGATACTCAAATCCAA+CGG | + | chr8_2:18888007-18888026 | None:intergenic | 40.0% | |
CGTTGGATTTGAGTATCCAA+CGG | - | chr8_2:18888005-18888024 | Msa1238500:intron | 40.0% | |
CATGACGTGGTTTATTGGTA+GGG | + | chr8_2:18888165-18888184 | None:intergenic | 40.0% | |
TCATGACGTGGTTTATTGGT+AGG | + | chr8_2:18888166-18888185 | None:intergenic | 40.0% | |
CATGTCATGACGTGGTTTAT+TGG | + | chr8_2:18888170-18888189 | None:intergenic | 40.0% | |
! | GACATTTTCATGTCATGACG+TGG | + | chr8_2:18888178-18888197 | None:intergenic | 40.0% |
ATTGACTACTCTCGGTGAAT+CGG | + | chr8_2:18888484-18888503 | None:intergenic | 40.0% | |
ATGTCAAATGAGTGGGCAAA+AGG | - | chr8_2:18888861-18888880 | Msa1238500:intron | 40.0% | |
ATATAGGCAGTTGCAAACCT+AGG | + | chr8_2:18888990-18889009 | None:intergenic | 40.0% | |
TGCATCAATTGTGTTTGTCC+TGG | - | chr8_2:18889071-18889090 | Msa1238500:CDS | 40.0% | |
! | TTCAGTTCTGGCCAAAGAAA+AGG | + | chr8_2:18889202-18889221 | None:intergenic | 40.0% |
GATGAATCGTAGGACTAACA+TGG | + | chr8_2:18889386-18889405 | None:intergenic | 40.0% | |
GTCCTACGATTCATCAACAT+CGG | - | chr8_2:18889391-18889410 | Msa1238500:CDS | 40.0% | |
! | TTCCGATGTTGATGAATCGT+AGG | + | chr8_2:18889396-18889415 | None:intergenic | 40.0% |
GTCACAGAAGAATTTGCGTG+TGG | - | chr8_2:18879185-18879204 | Msa1238500:intron | 45.0% | |
! | GTTAAGCAGTTAGCTTCAGC+TGG | - | chr8_2:18879437-18879456 | Msa1238500:CDS | 45.0% |
AGCTTCAGCTGGAATCAAAG+TGG | - | chr8_2:18879448-18879467 | Msa1238500:CDS | 45.0% | |
! | GGATACTTTTCGTTCCTCTG+TGG | + | chr8_2:18879748-18879767 | None:intergenic | 45.0% |
! | TTGAACTCCCTGACTTGCAA+TGG | + | chr8_2:18879909-18879928 | None:intergenic | 45.0% |
! | AGTCCTCCCTCCTTTTTATG+AGG | - | chr8_2:18879937-18879956 | Msa1238500:intron | 45.0% |
!! | AAGTTAGGGTGAGTTCTGGA+GGG | + | chr8_2:18880032-18880051 | None:intergenic | 45.0% |
! | AAAGTTAGGGTGAGTTCTGG+AGG | + | chr8_2:18880033-18880052 | None:intergenic | 45.0% |
GACCCATACCAGATGAAAGT+AGG | + | chr8_2:18880067-18880086 | None:intergenic | 45.0% | |
! | ATATTTAAAGCCGGGGGTGT+TGG | - | chr8_2:18880106-18880125 | Msa1238500:CDS | 45.0% |
AAAACCTTCCCGATCACGAT+TGG | + | chr8_2:18880160-18880179 | None:intergenic | 45.0% | |
ATGGGTTTGAGGATTGGGAA+TGG | - | chr8_2:18880233-18880252 | Msa1238500:CDS | 45.0% | |
GTTAACAATGCTGGGATTGG+TGG | - | chr8_2:18880437-18880456 | Msa1238500:intron | 45.0% | |
AAGACCCAGTACATGCATCA+TGG | + | chr8_2:18880576-18880595 | None:intergenic | 45.0% | |
ATAGTTGAAGGAGGGGAAGA+AGG | + | chr8_2:18881012-18881031 | None:intergenic | 45.0% | |
GTCAATGTATCATCGAGAGC+AGG | - | chr8_2:18881049-18881068 | Msa1238500:intron | 45.0% | |
GAAGGGTCCTTAGAAAGGAA+AGG | - | chr8_2:18881690-18881709 | Msa1238500:intron | 45.0% | |
GGTCCTTAGAAAGGAAAGGT+TGG | - | chr8_2:18881694-18881713 | Msa1238500:intron | 45.0% | |
AGGCCAACCTTTCCTTTCTA+AGG | + | chr8_2:18881700-18881719 | None:intergenic | 45.0% | |
!! | TAGAAAGGAAAGGTTGGCCT+AGG | - | chr8_2:18881700-18881719 | Msa1238500:intron | 45.0% |
GGAAGTAGTGCTAACCTAAC+AGG | + | chr8_2:18881891-18881910 | None:intergenic | 45.0% | |
AGGTTAGCACTACTTCCCAA+TGG | - | chr8_2:18881894-18881913 | Msa1238500:intron | 45.0% | |
GTAGGTCAATTATACCGGGA+CGG | + | chr8_2:18882015-18882034 | None:intergenic | 45.0% | |
GCAGCCTTTAGCTATCTACA+TGG | - | chr8_2:18882946-18882965 | Msa1238500:intron | 45.0% | |
AGAGGGAAATCTGAGAGACT+TGG | + | chr8_2:18883337-18883356 | None:intergenic | 45.0% | |
AGGATAACCGAGGCTAAACT+AGG | - | chr8_2:18883965-18883984 | Msa1238500:intron | 45.0% | |
TAACCGAGGCTAAACTAGGA+AGG | - | chr8_2:18883969-18883988 | Msa1238500:intron | 45.0% | |
AGGATAACCGAGGCTAAACT+AGG | - | chr8_2:18883965-18883984 | Msa1238500:intron | 45.0% | |
TAACCGAGGCTAAACTAGGA+AGG | - | chr8_2:18883969-18883988 | Msa1238500:intron | 45.0% | |
CACTTCATTAACCCCACACA+CGG | - | chr8_2:18884293-18884312 | Msa1238500:intron | 45.0% | |
CAGCAACAGATCTAGCCATA+GGG | + | chr8_2:18884320-18884339 | None:intergenic | 45.0% | |
AAAATAAGAGACCCCCCTTG+GGG | - | chr8_2:18884582-18884601 | Msa1238500:intron | 45.0% | |
AATCCTATAATCCCCAAGGG+GGG | + | chr8_2:18884596-18884615 | None:intergenic | 45.0% | |
CCCTTGGGGATTATAGGATT+AGG | - | chr8_2:18884596-18884615 | Msa1238500:intron | 45.0% | |
!! | CATAAGCGATTTTGGTGAGC+TGG | + | chr8_2:18885148-18885167 | None:intergenic | 45.0% |
GCTCACCAAAATCGCTTATG+TGG | - | chr8_2:18885148-18885167 | Msa1238500:intron | 45.0% | |
! | AGTTTTGCGAGACTGTTAGG+GGG | - | chr8_2:18886465-18886484 | Msa1238500:intron | 45.0% |
GTGGTGACTGGATCAAACAA+AGG | - | chr8_2:18887069-18887088 | Msa1238500:intron | 45.0% | |
! | GTAAGGCAGTTAGCTTCAAC+TGG | - | chr8_2:18887108-18887127 | Msa1238500:intron | 45.0% |
TGTTGCTGATGCTTCAAGTG+TGG | - | chr8_2:18887236-18887255 | Msa1238500:intron | 45.0% | |
GACACGGTAATATGGGTTTG+AGG | - | chr8_2:18887360-18887379 | Msa1238500:intron | 45.0% | |
GTACGAAGACTGTATTGTGC+AGG | - | chr8_2:18887560-18887579 | Msa1238500:CDS | 45.0% | |
!! | TTTCTTTGGTCTTGCAGCCA+CGG | - | chr8_2:18887902-18887921 | Msa1238500:intron | 45.0% |
AACGATGGCTACAAAACCGT+TGG | + | chr8_2:18888024-18888043 | None:intergenic | 45.0% | |
CGTGGTTTATTGGTAGGGAA+GGG | + | chr8_2:18888160-18888179 | None:intergenic | 45.0% | |
ACGTGGTTTATTGGTAGGGA+AGG | + | chr8_2:18888161-18888180 | None:intergenic | 45.0% | |
TGAATCGGATAACTGGAGGA+GGG | + | chr8_2:18888469-18888488 | None:intergenic | 45.0% | |
GGTATCTTCACAGCAGAAGA+AGG | - | chr8_2:18889125-18889144 | Msa1238500:CDS | 45.0% | |
!! | AAGGTGCTGCTAATCCTGTT+AGG | - | chr8_2:18889144-18889163 | Msa1238500:CDS | 45.0% |
!! | AGTGCATCTGGCCTTTTCTT+TGG | - | chr8_2:18889188-18889207 | Msa1238500:CDS | 45.0% |
CAACATCGGAATGCAGAAAG+TGG | - | chr8_2:18889405-18889424 | Msa1238500:CDS | 45.0% | |
!!! | AATAATTATTTTTTTTTTGA+AGG | - | chr8_2:18882761-18882780 | Msa1238500:intron | 5.0% |
!! | TTGAATAATTAATAAATTTA+TGG | - | chr8_2:18883029-18883048 | Msa1238500:intron | 5.0% |
!!! | ATAAAATATTAAATAAGTTT+TGG | + | chr8_2:18883712-18883731 | None:intergenic | 5.0% |
!!! | ATATTTTATATTTTAATCTA+TGG | - | chr8_2:18883723-18883742 | Msa1238500:intron | 5.0% |
!!! | GATATTATAAAAATAAATTT+TGG | - | chr8_2:18883817-18883836 | Msa1238500:intron | 5.0% |
!! | AAAAAAAAATAATAAAAAGA+TGG | + | chr8_2:18884961-18884980 | None:intergenic | 5.0% |
!!! | TCTTTTTATTATTTTTTTTT+AGG | - | chr8_2:18884961-18884980 | Msa1238500:intron | 5.0% |
!!! | CTTTTTATTATTTTTTTTTA+GGG | - | chr8_2:18884962-18884981 | Msa1238500:intron | 5.0% |
!!! | ATACAAAAAATAAAAAATTT+TGG | + | chr8_2:18885434-18885453 | None:intergenic | 5.0% |
!!! | ATTTTTCAAAATTAAAATAT+TGG | - | chr8_2:18885792-18885811 | Msa1238500:intron | 5.0% |
!!! | ATTTTCAAAATTTTTAAAAA+AGG | + | chr8_2:18885881-18885900 | None:intergenic | 5.0% |
!!! | AAAATATTTTAAAAAAAATC+TGG | + | chr8_2:18885934-18885953 | None:intergenic | 5.0% |
TCCTTGTGTCTCTCTTCCTC+AGG | - | chr8_2:18879369-18879388 | Msa1238500:intron | 50.0% | |
ACCTGAGGAAGAGAGACACA+AGG | + | chr8_2:18879373-18879392 | None:intergenic | 50.0% | |
TCTCTTCCTCAGGTATGCAG+TGG | - | chr8_2:18879379-18879398 | Msa1238500:intron | 50.0% | |
GTGGTGACTGGAGCAAACAA+AGG | - | chr8_2:18879398-18879417 | Msa1238500:intron | 50.0% | |
TGCTGCAAGTGTAGCTTCTC+TGG | - | chr8_2:18879574-18879593 | Msa1238500:CDS | 50.0% | |
TGCAAGTGTAGCTTCTCTGG+CGG | - | chr8_2:18879577-18879596 | Msa1238500:CDS | 50.0% | |
CGTTCCTCTGTGGCAATATG+AGG | + | chr8_2:18879738-18879757 | None:intergenic | 50.0% | |
GCGAAGTCATTACCTTAGCG+TGG | - | chr8_2:18879982-18880001 | Msa1238500:intron | 50.0% | |
CTTTCATCTGGTATGGGTCC+AGG | - | chr8_2:18880068-18880087 | Msa1238500:intron | 50.0% | |
!! | CACCCCCGGCTTTAAATATC+AGG | + | chr8_2:18880105-18880124 | None:intergenic | 50.0% |
! | CTTCCCGATCACGATTGGTT+TGG | + | chr8_2:18880155-18880174 | None:intergenic | 50.0% |
CAAACCAATCGTGATCGGGA+AGG | - | chr8_2:18880153-18880172 | Msa1238500:intron | 50.0% | |
! | TGATCGGGAAGGTTTTCCGT+GGG | - | chr8_2:18880164-18880183 | Msa1238500:intron | 50.0% |
! | TTCATTTTCCATGCGGGCAG+AGG | + | chr8_2:18880202-18880221 | None:intergenic | 50.0% |
TAGGGATGACAATGAGGGTC+GGG | + | chr8_2:18880273-18880292 | None:intergenic | 50.0% | |
CTAGGGATGACAATGAGGGT+CGG | + | chr8_2:18880274-18880293 | None:intergenic | 50.0% | |
TGCATCAACTGTGTTTGCCC+TGG | - | chr8_2:18881801-18881820 | Msa1238500:intron | 50.0% | |
!! | AAGGTGCTGCTCATCCTGTT+AGG | - | chr8_2:18881874-18881893 | Msa1238500:intron | 50.0% |
CTTCCCAATGGTAGTCCATC+TGG | - | chr8_2:18881906-18881925 | Msa1238500:intron | 50.0% | |
!! | AGGCCAGATGGACTACCATT+GGG | + | chr8_2:18881912-18881931 | None:intergenic | 50.0% |
TGGCTATAGAAGAGGCCAGA+TGG | + | chr8_2:18881924-18881943 | None:intergenic | 50.0% | |
ATGGGTCAGTTATTCCGGGA+CGG | - | chr8_2:18882207-18882226 | Msa1238500:intron | 50.0% | |
TTCATATACTCCCTCCGTCC+CGG | + | chr8_2:18882224-18882243 | None:intergenic | 50.0% | |
ATATAGACCCGCGTGATACG+CGG | - | chr8_2:18882475-18882494 | Msa1238500:intron | 50.0% | |
AACGGCACTTCCATTCGTAG+AGG | - | chr8_2:18882909-18882928 | Msa1238500:intron | 50.0% | |
GAGAGCGACCTTCCTTTAGA+AGG | - | chr8_2:18883543-18883562 | Msa1238500:intron | 50.0% | |
CTAACGTGCCCTTCAACATG+TGG | - | chr8_2:18883594-18883613 | Msa1238500:intron | 50.0% | |
CGTCCTTCCTAGTTTAGCCT+CGG | + | chr8_2:18883975-18883994 | None:intergenic | 50.0% | |
GCTAAACTAGGAAGGACGTG+TGG | - | chr8_2:18883977-18883996 | Msa1238500:intron | 50.0% | |
CGTCCTTCCTAGTTTAGCCT+CGG | + | chr8_2:18883975-18883994 | None:intergenic | 50.0% | |
GCTAAACTAGGAAGGACGTG+TGG | - | chr8_2:18883977-18883996 | Msa1238500:intron | 50.0% | |
TGGGAGGAGAACATTCTGTC+AGG | - | chr8_2:18884214-18884233 | Msa1238500:intron | 50.0% | |
GCAGCAACAGATCTAGCCAT+AGG | + | chr8_2:18884321-18884340 | None:intergenic | 50.0% | |
! | TTGTAAGGGTGCAAACCGGA+CGG | + | chr8_2:18885051-18885070 | None:intergenic | 50.0% |
! | AGCGAATCTGCTGAGTTGGA+GGG | + | chr8_2:18885102-18885121 | None:intergenic | 50.0% |
! | AAGCGAATCTGCTGAGTTGG+AGG | + | chr8_2:18885103-18885122 | None:intergenic | 50.0% |
CGTAAGCGAATCTGCTGAGT+TGG | + | chr8_2:18885106-18885125 | None:intergenic | 50.0% | |
ACTCAGCAGATTCGCTTACG+TGG | - | chr8_2:18885106-18885125 | Msa1238500:intron | 50.0% | |
! | CAGCGCCACATAAGCGATTT+TGG | + | chr8_2:18885156-18885175 | None:intergenic | 50.0% |
TAAGGTGTGCAGGTATGCAG+TGG | - | chr8_2:18887050-18887069 | Msa1238500:intron | 50.0% | |
!! | TTCTTTGGTCTTGCAGCCAC+GGG | - | chr8_2:18887903-18887922 | Msa1238500:intron | 50.0% |
AGTGGCAGCACCAATTCAAG+TGG | - | chr8_2:18887960-18887979 | Msa1238500:intron | 50.0% | |
ATCAGACAGTGCTAGCTGCA+AGG | + | chr8_2:18888346-18888365 | None:intergenic | 50.0% | |
ATAACTGGAGGAGGGGAAGA+AGG | + | chr8_2:18888461-18888480 | None:intergenic | 50.0% | |
GAATCGGATAACTGGAGGAG+GGG | + | chr8_2:18888468-18888487 | None:intergenic | 50.0% | |
GTGAATCGGATAACTGGAGG+AGG | + | chr8_2:18888470-18888489 | None:intergenic | 50.0% | |
TCGGTGAATCGGATAACTGG+AGG | + | chr8_2:18888473-18888492 | None:intergenic | 50.0% | |
CTCTCGGTGAATCGGATAAC+TGG | + | chr8_2:18888476-18888495 | None:intergenic | 50.0% | |
!! | GGAAGGAGTGCTAACCTAAC+AGG | + | chr8_2:18889161-18889180 | None:intergenic | 50.0% |
AGGTTAGCACTCCTTCCCAA+TGG | - | chr8_2:18889164-18889183 | Msa1238500:CDS | 50.0% | |
CAGATGCACTACCATTGGGA+AGG | + | chr8_2:18889178-18889197 | None:intergenic | 50.0% | |
! | CTTCCCAATGGTAGTGCATC+TGG | - | chr8_2:18889176-18889195 | Msa1238500:CDS | 50.0% |
AGGCCAGATGCACTACCATT+GGG | + | chr8_2:18889182-18889201 | None:intergenic | 50.0% | |
AAGGCCAGATGCACTACCAT+TGG | + | chr8_2:18889183-18889202 | None:intergenic | 50.0% | |
CATCGGAATGCAGAAAGTGG+AGG | - | chr8_2:18889408-18889427 | Msa1238500:CDS | 50.0% | |
CAGTCACCACTGCATACCTG+AGG | + | chr8_2:18879388-18879407 | None:intergenic | 55.0% | |
CTCAGGTATGCAGTGGTGAC+TGG | - | chr8_2:18879386-18879405 | Msa1238500:intron | 55.0% | |
TGGGTCCCATTACCACGCTA+AGG | + | chr8_2:18879997-18880016 | None:intergenic | 55.0% | |
TGGAGGGTAGTCGCATGTGT+GGG | + | chr8_2:18880016-18880035 | None:intergenic | 55.0% | |
!! | TTTAAAGCCGGGGGTGTTGG+AGG | - | chr8_2:18880109-18880128 | Msa1238500:CDS | 55.0% |
! | GTGATCGGGAAGGTTTTCCG+TGG | - | chr8_2:18880163-18880182 | Msa1238500:intron | 55.0% |
! | GATCGGGAAGGTTTTCCGTG+GGG | - | chr8_2:18880165-18880184 | Msa1238500:intron | 55.0% |
GAGGCAGAATTTCCTCCCCA+CGG | + | chr8_2:18880183-18880202 | None:intergenic | 55.0% | |
AAATTCTGCCTCTGCCCGCA+TGG | - | chr8_2:18880191-18880210 | Msa1238500:intron | 55.0% | |
ATCATCGAGAGCAGGCACGA+TGG | - | chr8_2:18881057-18881076 | Msa1238500:intron | 55.0% | |
!! | GAGGCCAGATGGACTACCAT+TGG | + | chr8_2:18881913-18881932 | None:intergenic | 55.0% |
GTCATGTACTACCTCCGTCC+CGG | - | chr8_2:18881998-18882017 | Msa1238500:intron | 55.0% | |
GGTCAATTATACCGGGACGG+AGG | + | chr8_2:18882012-18882031 | None:intergenic | 55.0% | |
GTCAGTTATTCCGGGACGGA+GGG | - | chr8_2:18882211-18882230 | Msa1238500:intron | 55.0% | |
CATCAAACCGCGTATCACGC+GGG | + | chr8_2:18882485-18882504 | None:intergenic | 55.0% | |
GCATCAAACCGCGTATCACG+CGG | + | chr8_2:18882486-18882505 | None:intergenic | 55.0% | |
TAGCCATAGGGACCGTGTGT+GGG | + | chr8_2:18884308-18884327 | None:intergenic | 55.0% | |
AGACCCCCCTTGGGGATTAT+AGG | - | chr8_2:18884590-18884609 | Msa1238500:intron | 55.0% | |
! | GAATCTGCTGAGTTGGAGGG+GGG | + | chr8_2:18886272-18886291 | None:intergenic | 55.0% |
! | CGAATCTGCTGAGTTGGAGG+GGG | + | chr8_2:18886271-18886290 | None:intergenic | 55.0% |
! | GCGAATCTGCTGAGTTGGAG+GGG | + | chr8_2:18886270-18886289 | None:intergenic | 55.0% |
!! | TCGCTTATGTGGCGCTGACT+TGG | - | chr8_2:18885159-18885178 | Msa1238500:intron | 55.0% |
ACTCAGCAGATTCGCCTACG+TGG | + | chr8_2:18886265-18886284 | None:intergenic | 55.0% | |
CGTAGGCGAATCTGCTGAGT+TGG | - | chr8_2:18886265-18886284 | Msa1238500:intron | 55.0% | |
! | AGGCGAATCTGCTGAGTTGG+AGG | - | chr8_2:18886268-18886287 | Msa1238500:intron | 55.0% |
! | GGCGAATCTGCTGAGTTGGA+GGG | - | chr8_2:18886269-18886288 | Msa1238500:intron | 55.0% |
! | GCGAATCTGCTGAGTTGGAG+GGG | - | chr8_2:18886270-18886289 | Msa1238500:intron | 55.0% |
! | CGAATCTGCTGAGTTGGAGG+GGG | - | chr8_2:18886271-18886290 | Msa1238500:intron | 55.0% |
! | GAATCTGCTGAGTTGGAGGG+GGG | - | chr8_2:18886272-18886291 | Msa1238500:intron | 55.0% |
CTTGGACCGTGTCATGCATC+AGG | - | chr8_2:18887003-18887022 | Msa1238500:CDS | 55.0% | |
GGTCTGCCTGATGCATGACA+CGG | + | chr8_2:18887012-18887031 | None:intergenic | 55.0% | |
TGCAGGTATGCAGTGGTGAC+TGG | - | chr8_2:18887057-18887076 | Msa1238500:intron | 55.0% | |
ATGGGTTTGAGGATCGGGAG+TGG | - | chr8_2:18887371-18887390 | Msa1238500:intron | 55.0% | |
TGGGTTTGAGGATCGGGAGT+GGG | - | chr8_2:18887372-18887391 | Msa1238500:intron | 55.0% | |
GGAATGCAGAAAGTGGAGGC+AGG | - | chr8_2:18889412-18889431 | Msa1238500:CDS | 55.0% | |
CTGGAGGGTAGTCGCATGTG+TGG | + | chr8_2:18880017-18880036 | None:intergenic | 60.0% | |
ATCTCTGCCTCCAACACCCC+CGG | + | chr8_2:18880119-18880138 | None:intergenic | 60.0% | |
ATCGAGAGCAGGCACGATGG+AGG | - | chr8_2:18881060-18881079 | Msa1238500:intron | 60.0% | |
GGTCAGTTATTCCGGGACGG+AGG | - | chr8_2:18882210-18882229 | Msa1238500:intron | 60.0% | |
AACCCCACACACGGTCCCTA+TGG | - | chr8_2:18884302-18884321 | Msa1238500:intron | 60.0% | |
AGCCATAGGGACCGTGTGTG+GGG | + | chr8_2:18884307-18884326 | None:intergenic | 60.0% | |
CTAGCCATAGGGACCGTGTG+TGG | + | chr8_2:18884309-18884328 | None:intergenic | 60.0% | |
AAGCCAACTCAGCGCCACGT+AGG | - | chr8_2:18886248-18886267 | Msa1238500:intron | 60.0% | |
!!! | GAGGGGGGAGGGGTGTTTTT+AGG | - | chr8_2:18886287-18886306 | Msa1238500:intron | 60.0% |
GGGTTTGAGGATCGGGAGTG+GGG | - | chr8_2:18887373-18887392 | Msa1238500:intron | 60.0% | |
! | CGGGAAGGTTTTCCGTGGGG+AGG | - | chr8_2:18880168-18880187 | Msa1238500:intron | 65.0% |
!!! | GAGGGGGGAGGGGTGTTTTC+CGG | + | chr8_2:18885084-18885103 | None:intergenic | 65.0% |
! | TGCTGAGTTGGAGGGGGGAG+GGG | + | chr8_2:18886277-18886296 | None:intergenic | 65.0% |
! | CTGCTGAGTTGGAGGGGGGA+GGG | + | chr8_2:18886276-18886295 | None:intergenic | 65.0% |
! | TCTGCTGAGTTGGAGGGGGG+AGG | + | chr8_2:18886275-18886294 | None:intergenic | 65.0% |
! | TCGCCTACGTGGCGCTGAGT+TGG | + | chr8_2:18886254-18886273 | None:intergenic | 65.0% |
! | TCTGCTGAGTTGGAGGGGGG+AGG | - | chr8_2:18886275-18886294 | Msa1238500:intron | 65.0% |
! | CTGCTGAGTTGGAGGGGGGA+GGG | - | chr8_2:18886276-18886295 | Msa1238500:intron | 65.0% |
! | TGCTGAGTTGGAGGGGGGAG+GGG | - | chr8_2:18886277-18886296 | Msa1238500:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 18879134 | 18889479 | 18879134 | ID=Msa1238500;Name=Msa1238500 |
chr8_2 | mRNA | 18879134 | 18889479 | 18879134 | ID=Msa1238500-mRNA-1;Parent=Msa1238500;Name=Msa1238500-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.41|0.23|0.92|0.66|0.76|13|0|556 |
chr8_2 | exon | 18889331 | 18889479 | 18889331 | ID=Msa1238500-mRNA-1:exon:7082;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18888976 | 18889222 | 18888976 | ID=Msa1238500-mRNA-1:exon:7081;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18888102 | 18888176 | 18888102 | ID=Msa1238500-mRNA-1:exon:7080;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18887532 | 18887711 | 18887532 | ID=Msa1238500-mRNA-1:exon:7079;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18886919 | 18887025 | 18886919 | ID=Msa1238500-mRNA-1:exon:7078;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18886663 | 18886891 | 18886663 | ID=Msa1238500-mRNA-1:exon:7077;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18884378 | 18884400 | 18884378 | ID=Msa1238500-mRNA-1:exon:7076;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18881305 | 18881551 | 18881305 | ID=Msa1238500-mRNA-1:exon:7075;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18880957 | 18881031 | 18880957 | ID=Msa1238500-mRNA-1:exon:7074;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18880208 | 18880262 | 18880208 | ID=Msa1238500-mRNA-1:exon:7073;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18880083 | 18880136 | 18880083 | ID=Msa1238500-mRNA-1:exon:7072;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18879428 | 18879649 | 18879428 | ID=Msa1238500-mRNA-1:exon:7071;Parent=Msa1238500-mRNA-1 |
chr8_2 | exon | 18879134 | 18879138 | 18879134 | ID=Msa1238500-mRNA-1:exon:7070;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18889331 | 18889479 | 18889331 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18888976 | 18889222 | 18888976 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18888102 | 18888176 | 18888102 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18887532 | 18887711 | 18887532 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18886919 | 18887025 | 18886919 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18886663 | 18886891 | 18886663 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18884378 | 18884400 | 18884378 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18881305 | 18881551 | 18881305 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18880957 | 18881031 | 18880957 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18880208 | 18880262 | 18880208 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18880083 | 18880136 | 18880083 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18879428 | 18879649 | 18879428 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
chr8_2 | CDS | 18879134 | 18879138 | 18879134 | ID=Msa1238500-mRNA-1:cds;Parent=Msa1238500-mRNA-1 |
Gene Sequence |
Protein sequence |