AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0138020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138020 MtrunA17_Chr1g0210521 99.580 238 1 0 1 238 1 238 8.29e-180 492
Msa0138020 MtrunA17_Chr1g0169861 54.202 238 90 2 1 238 51 269 1.71e-96 283
Msa0138020 MtrunA17_Chr4g0010271 56.303 238 85 1 1 238 1 219 9.40e-96 279
Msa0138020 MtrunA17_Chr7g0237561 55.649 239 85 2 1 238 1 219 3.14e-92 270
Msa0138020 MtrunA17_Chr4g0043521 57.277 213 72 2 2 214 4 197 4.97e-92 270
Msa0138020 MtrunA17_Chr2g0296021 51.261 238 97 1 1 238 1 219 4.73e-91 267
Msa0138020 MtrunA17_Chr2g0291651 57.746 213 71 2 2 214 6 199 2.14e-90 265
Msa0138020 MtrunA17_Chr7g0237521 50.935 214 86 2 1 214 1 195 4.08e-78 234
Msa0138020 MtrunA17_Chr5g0441741 33.621 232 132 3 5 235 2 212 2.91e-44 148
Msa0138020 MtrunA17_Chr1g0169851 45.614 171 56 4 52 206 4 153 7.46e-43 142
Msa0138020 MtrunA17_Chr4g0026121 33.190 232 133 4 5 235 2 212 2.30e-42 143
Msa0138020 MtrunA17_Chr4g0010211 51.200 125 42 1 65 189 4 109 3.12e-41 137
Msa0138020 MtrunA17_Chr4g0064371 32.636 239 130 5 5 238 2 214 1.79e-40 138
Msa0138020 MtrunA17_Chr3g0080131 22.426 272 175 8 3 238 5 276 1.61e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138020 AT3G54300.3 86.134 238 33 0 1 238 1 238 4.00e-153 425
Msa0138020 AT3G54300.2 86.134 238 33 0 1 238 1 238 4.00e-153 425
Msa0138020 AT3G54300.1 86.134 238 33 0 1 238 1 238 4.00e-153 425
Msa0138020 AT1G04760.2 56.723 238 84 1 1 238 1 219 7.48e-97 282
Msa0138020 AT1G04760.1 56.723 238 84 1 1 238 1 219 7.48e-97 282
Msa0138020 AT2G32670.1 57.143 238 83 1 1 238 66 284 1.65e-94 278
Msa0138020 AT2G33120.1 57.143 238 83 2 1 238 1 219 3.69e-94 275
Msa0138020 AT1G04750.1 56.723 238 84 2 1 238 1 219 2.04e-92 271
Msa0138020 AT2G33120.2 55.285 246 83 3 1 238 1 227 4.11e-91 268
Msa0138020 AT2G33110.1 47.059 238 103 3 1 238 1 215 8.07e-70 213
Msa0138020 AT4G15780.1 48.485 198 82 2 1 197 1 179 6.90e-67 205
Msa0138020 AT2G33110.2 51.381 181 69 2 1 181 1 162 3.16e-62 193
Msa0138020 AT1G04750.2 55.696 158 51 2 81 238 3 141 2.39e-50 161
Msa0138020 AT1G04750.4 55.696 158 51 2 81 238 3 141 2.39e-50 161
Msa0138020 AT1G04750.3 55.696 158 51 2 81 238 3 141 2.39e-50 161
Msa0138020 AT5G11150.1 35.169 236 125 4 5 238 2 211 2.51e-45 151
Msa0138020 AT5G11150.2 35.169 236 125 4 5 238 2 211 4.86e-45 150
Msa0138020 AT5G22360.1 31.760 233 136 3 5 235 2 213 1.04e-42 144
Msa0138020 AT4G32150.1 35.407 209 113 3 5 212 2 189 5.97e-42 142
Msa0138020 AT2G25340.1 34.052 232 131 3 5 235 2 212 7.24e-39 134
Msa0138020 AT2G33120.3 63.953 86 31 0 153 238 52 137 8.63e-28 103
Msa0138020 AT3G24890.2 48.387 93 42 2 133 219 15 107 5.97e-21 85.5
Msa0138020 AT3G24890.1 67.442 43 14 0 141 183 23 65 4.42e-14 65.9
Msa0138020 AT3G24890.4 67.442 43 14 0 141 183 23 65 4.42e-14 65.9
Msa0138020 AT3G24890.3 67.442 43 14 0 141 183 23 65 4.42e-14 65.9
Msa0138020 AT3G24890.5 67.442 43 14 0 141 183 23 65 4.42e-14 65.9

Find 74 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATCTTGATAGAGAATT+TGG 0.088044 1_3:+70738973 Msa0138020:CDS
AAGAAATTGAATTCTGTATT+TGG 0.098661 1_3:+70741553 Msa0138020:three_prime_UTR
TTATCTTAGTTATAATATTA+TGG 0.161768 1_3:+70741491 Msa0138020:CDS
TTCCACTTGTACATTGAATT+TGG 0.179897 1_3:+70741606 Msa0138020:three_prime_UTR
AATTTGGTGCATGGAATTTA+TGG 0.221994 1_3:+70741622 Msa0138020:three_prime_UTR
TGGGGAGAAGATTGAACTTT+TGG 0.275778 1_3:+70741263 Msa0138020:CDS
ATCACAAGAATAAGTGTATT+TGG 0.280428 1_3:-70738365 None:intergenic
ATTATAGCTGACATAATAAC+TGG 0.284197 1_3:+70741705 Msa0138020:three_prime_UTR
TATCTTAGTTATAATATTAT+GGG 0.315233 1_3:+70741492 Msa0138020:CDS
GATAGTTTACTCATTTCTTC+AGG 0.318737 1_3:-70739118 None:intergenic
AGAAATTGAATTCTGTATTT+GGG 0.331639 1_3:+70741554 Msa0138020:three_prime_UTR
CTCCCACCATCAGCTTCATT+TGG 0.335673 1_3:-70741459 None:intergenic
GTTATGCAGGCCAAGTCTTA+AGG 0.350766 1_3:+70739069 Msa0138020:intron
TGCTAAAACAACAGTTCCTT+TGG 0.361705 1_3:-70738269 None:intergenic
AACGGAAAACTTGCAGTTCC+AGG 0.368337 1_3:+70741293 Msa0138020:CDS
TTAGCTGCCTGCCCTGCCTC+TGG 0.383925 1_3:-70741411 None:intergenic
GGCTGACAGCTTCCAGAGGC+AGG 0.400419 1_3:+70741399 Msa0138020:intron
GCAGAACACACTCAATATAC+TGG 0.403286 1_3:+70738289 Msa0138020:CDS
ATTCTGTATTTGGGCACATA+AGG 0.404731 1_3:+70741563 Msa0138020:three_prime_UTR
ACAATCTTGATAGAGAATTT+GGG 0.414431 1_3:+70738974 Msa0138020:CDS
TTCAATTTCCTCTTAGACAA+TGG 0.420582 1_3:+70738397 Msa0138020:CDS
TATTATGGGTTATTGCTTGT+GGG 0.421870 1_3:+70741506 Msa0138020:CDS
ACAGCTTCCAGAGGCAGGGC+AGG 0.424399 1_3:+70741404 Msa0138020:CDS
GATGACTTTAACCAGCGTTA+TGG 0.433674 1_3:+70738865 Msa0138020:CDS
TTATGCAGGCCAAGTCTTAA+GGG 0.435187 1_3:+70739070 Msa0138020:intron
GGCAGGGCAGGCAGCTAAGA+AGG 0.436079 1_3:+70741416 Msa0138020:CDS
TACCGAATCCATTGTCTAAG+AGG 0.440698 1_3:-70738405 None:intergenic
TTCCTCTTAGACAATGGATT+CGG 0.441125 1_3:+70738403 Msa0138020:CDS
CTTTGATCTCGCTCTACTAC+AGG 0.444216 1_3:+70737998 Msa0138020:five_prime_UTR
GAGTAAACTATCAAAGTTGA+AGG 0.456658 1_3:+70739129 Msa0138020:CDS
AGAAGAAAGAAAGAAAGAAA+AGG 0.457985 1_3:-70737951 None:intergenic
GTGTATTTGGTGCTATTTGA+AGG 0.464053 1_3:-70738352 None:intergenic
GTTGTTGCTGATGAATCAAT+TGG 0.466016 1_3:+70738805 Msa0138020:CDS
ATTATGGGTTATTGCTTGTG+GGG 0.475053 1_3:+70741507 Msa0138020:CDS
TTCTGTATTTGGGCACATAA+GGG 0.476777 1_3:+70741564 Msa0138020:three_prime_UTR
GTTTACTCATTTCTTCAGGA+TGG 0.480252 1_3:-70739114 None:intergenic
ATATTATGGGTTATTGCTTG+TGG 0.493605 1_3:+70741505 Msa0138020:CDS
GGCTCAAATAACTGAGGTCA+AGG 0.502250 1_3:+70739150 Msa0138020:CDS
TTTACTCATTTCTTCAGGAT+GGG 0.513008 1_3:-70739113 None:intergenic
CACCAAATTCAATGTACAAG+TGG 0.530457 1_3:-70741608 None:intergenic
TTATGGGTTATTGCTTGTGG+GGG 0.536160 1_3:+70741508 Msa0138020:CDS
ATTGTCTAAGAGGAAATTGA+AGG 0.538133 1_3:-70738395 None:intergenic
AAATACACTTATTCTTGTGA+TGG 0.544278 1_3:+70738367 Msa0138020:CDS
CTCAAATAACTGAGGTCAAG+GGG 0.547294 1_3:+70739152 Msa0138020:CDS
ATATATAGCTTTGTTGCCAA+AGG 0.547808 1_3:+70738253 Msa0138020:CDS
TGCATATGCCCCTTAAGACT+TGG 0.551661 1_3:-70739079 None:intergenic
ATGAAGCTGATGGTGGGAGG+AGG 0.554494 1_3:+70741463 Msa0138020:CDS
TGAGGTCAAGGGGATAATGA+TGG 0.556128 1_3:+70739162 Msa0138020:CDS
ATAATATTATAACTAAGATA+AGG 0.566690 1_3:-70741489 None:intergenic
TGAAGCTTGTGCTATACTGC+TGG 0.576605 1_3:+70741664 Msa0138020:three_prime_UTR
CATCATCATCAGCAAGTGGA+TGG 0.582788 1_3:-70738912 None:intergenic
TCCTCATCATCATCAGCAAG+TGG 0.587787 1_3:-70738916 None:intergenic
ATTCAAGCATTGAACAGCAA+TGG 0.590197 1_3:-70738323 None:intergenic
GCTCAAATAACTGAGGTCAA+GGG 0.590488 1_3:+70739151 Msa0138020:CDS
TTATAGCTGACATAATAACT+GGG 0.591390 1_3:+70741706 Msa0138020:three_prime_UTR
TGTACATTGAATTTGGTGCA+TGG 0.594394 1_3:+70741613 Msa0138020:three_prime_UTR
CTCCAAATGAAGCTGATGGT+GGG 0.596961 1_3:+70741457 Msa0138020:CDS
AATGATGGATAATATTGAGA+AGG 0.603558 1_3:+70739177 Msa0138020:CDS
TCTCCAAATGAAGCTGATGG+TGG 0.603558 1_3:+70741456 Msa0138020:CDS
TAATACTAGCACCATAACGC+TGG 0.607184 1_3:-70738876 None:intergenic
GCTGACAGCTTCCAGAGGCA+GGG 0.612920 1_3:+70741400 Msa0138020:CDS
TATGCAGGCCAAGTCTTAAG+GGG 0.622221 1_3:+70739071 Msa0138020:intron
GGCAGCTAAGAAGGAAGATG+TGG 0.627425 1_3:+70741425 Msa0138020:CDS
AGCTGACATAATAACTGGGG+TGG 0.627919 1_3:+70741710 Msa0138020:three_prime_UTR
TTTGAAGGTGTTGGATCGTG+GGG 0.629493 1_3:+70741245 Msa0138020:intron
TTGCTGATGAATCAATTGGA+AGG 0.631302 1_3:+70738809 Msa0138020:CDS
TTGATTCATCAGCAACAACA+AGG 0.631330 1_3:-70738801 None:intergenic
TTTGTGAGAATGAGTCAAAG+GGG 0.636577 1_3:+70738226 Msa0138020:exon
CAAATGAAGCTGATGGTGGG+AGG 0.647708 1_3:+70741460 Msa0138020:CDS
GAATCTCCAAATGAAGCTGA+TGG 0.655894 1_3:+70741453 Msa0138020:CDS
TCCACTTGCTGATGATGATG+AGG 0.664896 1_3:+70738915 Msa0138020:CDS
TTTAGGCTGACAGCTTCCAG+AGG 0.685949 1_3:+70741395 Msa0138020:intron
GTTGAAGGCTCAAATAACTG+AGG 0.694430 1_3:+70739144 Msa0138020:CDS
TATAGCTGACATAATAACTG+GGG 0.717486 1_3:+70741707 Msa0138020:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATTATAACTAAGATA+AGG - chr1_3:70741492-70741511 None:intergenic 10.0%
!! TTATCTTAGTTATAATATTA+TGG + chr1_3:70741491-70741510 Msa0138020:CDS 10.0%
!! TATCTTAGTTATAATATTAT+GGG + chr1_3:70741492-70741511 Msa0138020:CDS 10.0%
!!! TATAGTAAGTTTTTTTTGTT+TGG + chr1_3:70738509-70738528 Msa0138020:intron 15.0%
!!! TAACGATTTGTTTTTTTTTT+TGG - chr1_3:70738681-70738700 None:intergenic 15.0%
!!! TTAAACCTAAATCATTTTTA+CGG - chr1_3:70739745-70739764 None:intergenic 15.0%
!!! AAAAATGATTTAGGTTTAAA+TGG + chr1_3:70739746-70739765 Msa0138020:intron 15.0%
!! CTGAAGAATATAATTATATA+AGG - chr1_3:70739930-70739949 None:intergenic 15.0%
!!! ATATTTTATGAGTAATCAAA+AGG - chr1_3:70740900-70740919 None:intergenic 15.0%
!!! AATTTTTCTTTTGGTTAAAT+TGG + chr1_3:70740984-70741003 Msa0138020:intron 15.0%
!!! ATTTTTCTTTTGGTTAAATT+GGG + chr1_3:70740985-70741004 Msa0138020:intron 15.0%
!! TGAAACATAAATCATATATA+CGG - chr1_3:70741121-70741140 None:intergenic 15.0%
!! ATTTATTTGCGTTAAAATTT+AGG + chr1_3:70741378-70741397 Msa0138020:intron 15.0%
!! ATTATAATTAACCCTAATTG+AGG - chr1_3:70738099-70738118 None:intergenic 20.0%
!!! TTGTTATTTACAACTTGATT+AGG + chr1_3:70738159-70738178 Msa0138020:intron 20.0%
!!! TTACTATTCTAGTTTTCTTT+AGG + chr1_3:70739972-70739991 Msa0138020:intron 20.0%
!! TTAAACCTTCCAAAAAAAAT+TGG - chr1_3:70740455-70740474 None:intergenic 20.0%
!! TAGCTAATAAAAATTGACAT+GGG + chr1_3:70740539-70740558 Msa0138020:intron 20.0%
!! ATTGTCTTTATCTTTATAAC+AGG + chr1_3:70740733-70740752 Msa0138020:intron 20.0%
!! ATGTTGTTAAATATAAGAGA+AGG - chr1_3:70740760-70740779 None:intergenic 20.0%
!!! AACTGTGATAATTTTTCTTT+TGG + chr1_3:70740975-70740994 Msa0138020:intron 20.0%
!! ATTCTAATTTAAGTATCCAA+CGG - chr1_3:70741032-70741051 None:intergenic 20.0%
!!! ATATACTATACTTTTTATGC+CGG + chr1_3:70741050-70741069 Msa0138020:intron 20.0%
!! AAGAAATTGAATTCTGTATT+TGG + chr1_3:70741553-70741572 Msa0138020:three_prime_UTR 20.0%
!! AGAAATTGAATTCTGTATTT+GGG + chr1_3:70741554-70741573 Msa0138020:three_prime_UTR 20.0%
!!! GAATTTATGGTTACTTTTAT+TGG + chr1_3:70741635-70741654 Msa0138020:three_prime_UTR 20.0%
! AGAAGAAAGAAAGAAAGAAA+AGG - chr1_3:70737954-70737973 None:intergenic 25.0%
! ATCACAAGAATAAGTGTATT+TGG - chr1_3:70738368-70738387 None:intergenic 25.0%
! AAATACACTTATTCTTGTGA+TGG + chr1_3:70738367-70738386 Msa0138020:CDS 25.0%
! TAAAAAACGCTATAATTGCA+GGG - chr1_3:70738482-70738501 None:intergenic 25.0%
! TACAATCTTGATAGAGAATT+TGG + chr1_3:70738973-70738992 Msa0138020:CDS 25.0%
! ACAATCTTGATAGAGAATTT+GGG + chr1_3:70738974-70738993 Msa0138020:CDS 25.0%
!!! AATGATGGATAATATTGAGA+AGG + chr1_3:70739177-70739196 Msa0138020:CDS 25.0%
! TTGCCTTTAAATGATATACA+AGG + chr1_3:70739342-70739361 Msa0138020:intron 25.0%
! TGCCTTTAAATGATATACAA+GGG + chr1_3:70739343-70739362 Msa0138020:intron 25.0%
! ATCCCTTGTATATCATTTAA+AGG - chr1_3:70739348-70739367 None:intergenic 25.0%
!!! TGTATTTTGATTATGCTTTC+TGG + chr1_3:70739403-70739422 Msa0138020:intron 25.0%
!! GTATACTTTAGCTTAAAATC+AGG + chr1_3:70739604-70739623 Msa0138020:intron 25.0%
! AGGAGAATATATTAGATAGA+AGG + chr1_3:70739664-70739683 Msa0138020:intron 25.0%
!!! TATTCATTTCAAGTTACGAA+AGG + chr1_3:70739894-70739913 Msa0138020:intron 25.0%
!!! ATTCATTTCAAGTTACGAAA+GGG + chr1_3:70739895-70739914 Msa0138020:intron 25.0%
!! TTATATGCATGCATTTTCTA+AGG + chr1_3:70740047-70740066 Msa0138020:intron 25.0%
!!! GAGAAATCTTTCACTTTTTT+TGG + chr1_3:70740133-70740152 Msa0138020:intron 25.0%
!!! TAATTGGAGCCAATTTTTTT+TGG + chr1_3:70740443-70740462 Msa0138020:intron 25.0%
! CTAGCTAATAAAAATTGACA+TGG + chr1_3:70740538-70740557 Msa0138020:intron 25.0%
!! CATTTCAACTTTTGATGTTT+AGG + chr1_3:70740587-70740606 Msa0138020:intron 25.0%
! TTCTAATTTAAGTATCCAAC+GGG - chr1_3:70741031-70741050 None:intergenic 25.0%
! AGATTGTCTTAATAATCATC+CGG - chr1_3:70741072-70741091 None:intergenic 25.0%
!!! TTATGTTTCAGTTTTAAACC+AGG + chr1_3:70741131-70741150 Msa0138020:intron 25.0%
! GTGCTTTATATTCAAAAACA+TGG - chr1_3:70741199-70741218 None:intergenic 25.0%
! TTTGGATAATAGTTAATACC+TGG - chr1_3:70741314-70741333 None:intergenic 25.0%
! ATTATAGCTGACATAATAAC+TGG + chr1_3:70741705-70741724 Msa0138020:three_prime_UTR 25.0%
! TTATAGCTGACATAATAACT+GGG + chr1_3:70741706-70741725 Msa0138020:three_prime_UTR 25.0%
TTTACTTTCTGACCTCAATT+AGG + chr1_3:70738084-70738103 Msa0138020:intron 30.0%
TTACTTTCTGACCTCAATTA+GGG + chr1_3:70738085-70738104 Msa0138020:intron 30.0%
CAGAAAAATCTAGCAAGAAA+AGG - chr1_3:70738132-70738151 None:intergenic 30.0%
! TTTTTGTGAGAATGAGTCAA+AGG + chr1_3:70738224-70738243 Msa0138020:exon 30.0%
! TTTTGTGAGAATGAGTCAAA+GGG + chr1_3:70738225-70738244 Msa0138020:exon 30.0%
!! ATATATAGCTTTGTTGCCAA+AGG + chr1_3:70738253-70738272 Msa0138020:CDS 30.0%
ATTGTCTAAGAGGAAATTGA+AGG - chr1_3:70738398-70738417 None:intergenic 30.0%
TTCAATTTCCTCTTAGACAA+TGG + chr1_3:70738397-70738416 Msa0138020:CDS 30.0%
CTAAAAAACGCTATAATTGC+AGG - chr1_3:70738483-70738502 None:intergenic 30.0%
!!! TTCCTTTTGTGTTTTTGGAA+CGG + chr1_3:70738836-70738855 Msa0138020:CDS 30.0%
TTTACTCATTTCTTCAGGAT+GGG - chr1_3:70739116-70739135 None:intergenic 30.0%
GATAGTTTACTCATTTCTTC+AGG - chr1_3:70739121-70739140 None:intergenic 30.0%
GAGTAAACTATCAAAGTTGA+AGG + chr1_3:70739129-70739148 Msa0138020:CDS 30.0%
! AAATGCATGTGTGTGTTATT+AGG - chr1_3:70739209-70739228 None:intergenic 30.0%
ATACTACCTATTCTTATGTC+TGG + chr1_3:70739293-70739312 Msa0138020:intron 30.0%
!! TTTTGATTATGCTTTCTGGT+TGG + chr1_3:70739407-70739426 Msa0138020:intron 30.0%
!! TAAGAGTGTTTAGATGTGTA+TGG + chr1_3:70739436-70739455 Msa0138020:intron 30.0%
CGATAAACAATGACATCATT+TGG + chr1_3:70739480-70739499 Msa0138020:intron 30.0%
!!! AAAGTTTTTTCCAAACTAGG+TGG - chr1_3:70739521-70739540 None:intergenic 30.0%
ACCTAGTTTGGAAAAAACTT+TGG + chr1_3:70739520-70739539 Msa0138020:intron 30.0%
!!! ACCAAAGTTTTTTCCAAACT+AGG - chr1_3:70739524-70739543 None:intergenic 30.0%
TAGTTTGGAAAAAACTTTGG+TGG + chr1_3:70739523-70739542 Msa0138020:intron 30.0%
TGGTTATGATATTCTTACCT+GGG + chr1_3:70739543-70739562 Msa0138020:intron 30.0%
! ACTTTAGCTTAAAATCAGGA+AGG + chr1_3:70739608-70739627 Msa0138020:intron 30.0%
ATATTAGATAGAAGGTAGTC+TGG + chr1_3:70739672-70739691 Msa0138020:intron 30.0%
AAGATAGGCCAAAAATTTAC+AGG + chr1_3:70739706-70739725 Msa0138020:intron 30.0%
!! CCTAAATCATTTTTACGGTT+TGG - chr1_3:70739740-70739759 None:intergenic 30.0%
CCAAACCGTAAAAATGATTT+AGG + chr1_3:70739737-70739756 Msa0138020:intron 30.0%
! ATATAGAAGCTTTTCCCATT+AGG - chr1_3:70739831-70739850 None:intergenic 30.0%
!!! CATTTTCTAAGGCATTGTTT+GGG + chr1_3:70740058-70740077 Msa0138020:intron 30.0%
AATTTGAAGGAACTCGTATA+GGG - chr1_3:70740266-70740285 None:intergenic 30.0%
TAATTTGAAGGAACTCGTAT+AGG - chr1_3:70740267-70740286 None:intergenic 30.0%
AGAGAATCCTTCTAATTTGA+AGG - chr1_3:70740279-70740298 None:intergenic 30.0%
! AAAAATAGAGGACTTTGAGA+GGG - chr1_3:70740335-70740354 None:intergenic 30.0%
AAAAAATAGAGGACTTTGAG+AGG - chr1_3:70740336-70740355 None:intergenic 30.0%
ACAATTTCAAACATAGCTAG+AGG - chr1_3:70740718-70740737 None:intergenic 30.0%
AAGCAAATCTTATAAAGCCA+TGG - chr1_3:70740820-70740839 None:intergenic 30.0%
!! ATGGCTTTATAAGATTTGCT+TGG + chr1_3:70740819-70740838 Msa0138020:intron 30.0%
!! TGGCTTTATAAGATTTGCTT+GGG + chr1_3:70740820-70740839 Msa0138020:intron 30.0%
! AAATGTTTTCTTCTGATTCC+TGG - chr1_3:70741152-70741171 None:intergenic 30.0%
!! TGAACTTTTGGTGGATAAAA+CGG + chr1_3:70741275-70741294 Msa0138020:CDS 30.0%
! ATATTATGGGTTATTGCTTG+TGG + chr1_3:70741505-70741524 Msa0138020:CDS 30.0%
! TATTATGGGTTATTGCTTGT+GGG + chr1_3:70741506-70741525 Msa0138020:CDS 30.0%
TTCCACTTGTACATTGAATT+TGG + chr1_3:70741606-70741625 Msa0138020:three_prime_UTR 30.0%
!! AATTTGGTGCATGGAATTTA+TGG + chr1_3:70741622-70741641 Msa0138020:three_prime_UTR 30.0%
TATAGCTGACATAATAACTG+GGG + chr1_3:70741707-70741726 Msa0138020:three_prime_UTR 30.0%
TTTGTGAGAATGAGTCAAAG+GGG + chr1_3:70738226-70738245 Msa0138020:exon 35.0%
TGCTAAAACAACAGTTCCTT+TGG - chr1_3:70738272-70738291 None:intergenic 35.0%
!! ATTCAAGCATTGAACAGCAA+TGG - chr1_3:70738326-70738345 None:intergenic 35.0%
!! GTGTATTTGGTGCTATTTGA+AGG - chr1_3:70738355-70738374 None:intergenic 35.0%
! TTCCTCTTAGACAATGGATT+CGG + chr1_3:70738403-70738422 Msa0138020:CDS 35.0%
CAACAGTCTTCAAATTTGCA+GGG - chr1_3:70738542-70738561 None:intergenic 35.0%
!! TTTAGTTCTGTCGTCATACA+CGG + chr1_3:70738564-70738583 Msa0138020:intron 35.0%
TCACATGGCATGATTATATG+GGG - chr1_3:70738590-70738609 None:intergenic 35.0%
GTCACATGGCATGATTATAT+GGG - chr1_3:70738591-70738610 None:intergenic 35.0%
AGACCCTAAATCAGCTAATT+GGG - chr1_3:70738623-70738642 None:intergenic 35.0%
TAGACCCTAAATCAGCTAAT+TGG - chr1_3:70738624-70738643 None:intergenic 35.0%
TTGATTCATCAGCAACAACA+AGG - chr1_3:70738804-70738823 None:intergenic 35.0%
GTTGTTGCTGATGAATCAAT+TGG + chr1_3:70738805-70738824 Msa0138020:CDS 35.0%
TTGCTGATGAATCAATTGGA+AGG + chr1_3:70738809-70738828 Msa0138020:CDS 35.0%
! GAGTGTTCCTTTTGTGTTTT+TGG + chr1_3:70738831-70738850 Msa0138020:CDS 35.0%
!!! TCCTTTTGTGTTTTTGGAAC+GGG + chr1_3:70738837-70738856 Msa0138020:CDS 35.0%
TCTTGATAGAGAATTTGGGT+TGG + chr1_3:70738978-70738997 Msa0138020:intron 35.0%
!!! GTATTTTGATCTCGTTATGC+AGG + chr1_3:70739056-70739075 Msa0138020:intron 35.0%
GTTTACTCATTTCTTCAGGA+TGG - chr1_3:70739117-70739136 None:intergenic 35.0%
GTACATCCAGACATAAGAAT+AGG - chr1_3:70739302-70739321 None:intergenic 35.0%
GTGGTTATGATATTCTTACC+TGG + chr1_3:70739542-70739561 Msa0138020:intron 35.0%
GGTTATGATATTCTTACCTG+GGG + chr1_3:70739544-70739563 Msa0138020:intron 35.0%
GTTATGATATTCTTACCTGG+GGG + chr1_3:70739545-70739564 Msa0138020:intron 35.0%
TTATGATATTCTTACCTGGG+GGG + chr1_3:70739546-70739565 Msa0138020:intron 35.0%
CTTATGATACTCTATCGTCT+TGG - chr1_3:70739646-70739665 None:intergenic 35.0%
! CAAGACGATAGAGTATCATA+AGG + chr1_3:70739644-70739663 Msa0138020:intron 35.0%
! CGCTTGATCCTGTAAATTTT+TGG - chr1_3:70739717-70739736 None:intergenic 35.0%
GGTTAGTGACATGAATCAAA+TGG - chr1_3:70739805-70739824 None:intergenic 35.0%
!!! GCATTTTCTAAGGCATTGTT+TGG + chr1_3:70740057-70740076 Msa0138020:intron 35.0%
ATTTGAAGGAACTCGTATAG+GGG - chr1_3:70740265-70740284 None:intergenic 35.0%
ACGAGTTCCTTCAAATTAGA+AGG + chr1_3:70740269-70740288 Msa0138020:intron 35.0%
! AAAATAGAGGACTTTGAGAG+GGG - chr1_3:70740334-70740353 None:intergenic 35.0%
!!! TCTCTTTTTGCTTTGTTTGC+GGG - chr1_3:70740410-70740429 None:intergenic 35.0%
!!! GTCTCTTTTTGCTTTGTTTG+CGG - chr1_3:70740411-70740430 None:intergenic 35.0%
GCAAACAAAGCAAAAAGAGA+CGG + chr1_3:70740410-70740429 Msa0138020:intron 35.0%
AGACGGAACTTTCTGTTAAT+TGG + chr1_3:70740427-70740446 Msa0138020:intron 35.0%
!!! TGGAGCCAATTTTTTTTGGA+AGG + chr1_3:70740447-70740466 Msa0138020:intron 35.0%
! GATGTTTAGGCATACTGATT+AGG + chr1_3:70740600-70740619 Msa0138020:intron 35.0%
! TAGGCATACTGATTAGGATT+TGG + chr1_3:70740606-70740625 Msa0138020:intron 35.0%
ATGTTGATCCAGTGATATGA+GGG - chr1_3:70740635-70740654 None:intergenic 35.0%
ATATCACTGGATCAACATGT+AGG + chr1_3:70740637-70740656 Msa0138020:intron 35.0%
AAATCTTATAAAGCCATGGC+CGG - chr1_3:70740816-70740835 None:intergenic 35.0%
ATCACAGTTAAAACCTCTGT+TGG - chr1_3:70740964-70740983 None:intergenic 35.0%
TTAAATTGGGATACTGCAGA+GGG + chr1_3:70740998-70741017 Msa0138020:intron 35.0%
!!! ATTTGCACTCGTTGTTTTGA+AGG + chr1_3:70741230-70741249 Msa0138020:intron 35.0%
AGTTCGGAAATGTTTGGATT+TGG - chr1_3:70741332-70741351 None:intergenic 35.0%
TTTCAGAGTTCGGAAATGTT+TGG - chr1_3:70741338-70741357 None:intergenic 35.0%
CAGTAGATTGTTTCAGAGTT+CGG - chr1_3:70741348-70741367 None:intergenic 35.0%
! ATTATGGGTTATTGCTTGTG+GGG + chr1_3:70741507-70741526 Msa0138020:CDS 35.0%
ATTCTGTATTTGGGCACATA+AGG + chr1_3:70741563-70741582 Msa0138020:three_prime_UTR 35.0%
TTCTGTATTTGGGCACATAA+GGG + chr1_3:70741564-70741583 Msa0138020:three_prime_UTR 35.0%
CACCAAATTCAATGTACAAG+TGG - chr1_3:70741611-70741630 None:intergenic 35.0%
!! TGTACATTGAATTTGGTGCA+TGG + chr1_3:70741613-70741632 Msa0138020:three_prime_UTR 35.0%
! TCCAATTTTACCCAGATTCG+TGG + chr1_3:70738052-70738071 Msa0138020:intron 40.0%
ACCACGAATCTGGGTAAAAT+TGG - chr1_3:70738056-70738075 None:intergenic 40.0%
GCAGAACACACTCAATATAC+TGG + chr1_3:70738289-70738308 Msa0138020:CDS 40.0%
TACCGAATCCATTGTCTAAG+AGG - chr1_3:70738408-70738427 None:intergenic 40.0%
GCAACAGTCTTCAAATTTGC+AGG - chr1_3:70738543-70738562 None:intergenic 40.0%
CGTCACATGGCATGATTATA+TGG - chr1_3:70738592-70738611 None:intergenic 40.0%
! ATGGCCCAATTAGCTGATTT+AGG + chr1_3:70738616-70738635 Msa0138020:intron 40.0%
! TGGCCCAATTAGCTGATTTA+GGG + chr1_3:70738617-70738636 Msa0138020:intron 40.0%
CACATGTTATGTAACAGCGA+TGG - chr1_3:70738761-70738780 None:intergenic 40.0%
ACCCGTTCCAAAAACACAAA+AGG - chr1_3:70738841-70738860 None:intergenic 40.0%
GATGACTTTAACCAGCGTTA+TGG + chr1_3:70738865-70738884 Msa0138020:CDS 40.0%
TAATACTAGCACCATAACGC+TGG - chr1_3:70738879-70738898 None:intergenic 40.0%
TTATGCAGGCCAAGTCTTAA+GGG + chr1_3:70739070-70739089 Msa0138020:intron 40.0%
GTTGAAGGCTCAAATAACTG+AGG + chr1_3:70739144-70739163 Msa0138020:CDS 40.0%
GCTCAAATAACTGAGGTCAA+GGG + chr1_3:70739151-70739170 Msa0138020:CDS 40.0%
CTCAAATAACTGAGGTCAAG+GGG + chr1_3:70739152-70739171 Msa0138020:CDS 40.0%
! ACTAGGTGGAGTTGATTAGA+TGG - chr1_3:70739507-70739526 None:intergenic 40.0%
CTAATCAACTCCACCTAGTT+TGG + chr1_3:70739508-70739527 Msa0138020:intron 40.0%
CTGGAAGTTAGAGGTAAGAT+AGG + chr1_3:70739691-70739710 Msa0138020:intron 40.0%
! AGAAGCTTTTCCCATTAGGT+CGG - chr1_3:70739827-70739846 None:intergenic 40.0%
AATCTTCATCTAGTCCCACT+CGG - chr1_3:70740015-70740034 None:intergenic 40.0%
GCATGCATATAATGCTCAAC+TGG - chr1_3:70740039-70740058 None:intergenic 40.0%
!! TAAGGCATTGTTTGGGAGTT+TGG + chr1_3:70740065-70740084 Msa0138020:intron 40.0%
TTTGAAGGAACTCGTATAGG+GGG - chr1_3:70740264-70740283 None:intergenic 40.0%
GGAGCAAGTGGAAAAAATAG+AGG - chr1_3:70740347-70740366 None:intergenic 40.0%
!!! TTTTGCTTTGTTTGCGGGTT+TGG - chr1_3:70740405-70740424 None:intergenic 40.0%
TGTTGATCCAGTGATATGAG+GGG - chr1_3:70740634-70740653 None:intergenic 40.0%
CATGTTGATCCAGTGATATG+AGG - chr1_3:70740636-70740655 None:intergenic 40.0%
! AAAGTATCCAGCCATGATGA+AGG + chr1_3:70740691-70740710 Msa0138020:intron 40.0%
AATCTTATAAAGCCATGGCC+GGG - chr1_3:70740815-70740834 None:intergenic 40.0%
GTTAAATTGGGATACTGCAG+AGG + chr1_3:70740997-70741016 Msa0138020:intron 40.0%
!!! ACTCGTTGTTTTGAAGGTGT+TGG + chr1_3:70741236-70741255 Msa0138020:intron 40.0%
!!! TTTTGAAGGTGTTGGATCGT+GGG + chr1_3:70741244-70741263 Msa0138020:intron 40.0%
! TGGGGAGAAGATTGAACTTT+TGG + chr1_3:70741263-70741282 Msa0138020:CDS 40.0%
! GGAGAAGATTGAACTTTTGG+TGG + chr1_3:70741266-70741285 Msa0138020:CDS 40.0%
GAATCTCCAAATGAAGCTGA+TGG + chr1_3:70741453-70741472 Msa0138020:CDS 40.0%
! TTATGGGTTATTGCTTGTGG+GGG + chr1_3:70741508-70741527 Msa0138020:CDS 40.0%
CTTTGATCTCGCTCTACTAC+AGG + chr1_3:70737998-70738017 Msa0138020:five_prime_UTR 45.0%
ACTACGAAGACCACGAATCT+GGG - chr1_3:70738065-70738084 None:intergenic 45.0%
AACTACGAAGACCACGAATC+TGG - chr1_3:70738066-70738085 None:intergenic 45.0%
AATCAGCTAATTGGGCCATG+TGG - chr1_3:70738615-70738634 None:intergenic 45.0%
!!! TGTGTTTTTGGAACGGGTGA+AGG + chr1_3:70738843-70738862 Msa0138020:CDS 45.0%
CATCATCATCAGCAAGTGGA+TGG - chr1_3:70738915-70738934 None:intergenic 45.0%
! TCCACTTGCTGATGATGATG+AGG + chr1_3:70738915-70738934 Msa0138020:CDS 45.0%
TCCTCATCATCATCAGCAAG+TGG - chr1_3:70738919-70738938 None:intergenic 45.0%
GTTATGCAGGCCAAGTCTTA+AGG + chr1_3:70739069-70739088 Msa0138020:intron 45.0%
TATGCAGGCCAAGTCTTAAG+GGG + chr1_3:70739071-70739090 Msa0138020:intron 45.0%
TGCATATGCCCCTTAAGACT+TGG - chr1_3:70739082-70739101 None:intergenic 45.0%
GGCTCAAATAACTGAGGTCA+AGG + chr1_3:70739150-70739169 Msa0138020:CDS 45.0%
TGAGGTCAAGGGGATAATGA+TGG + chr1_3:70739162-70739181 Msa0138020:CDS 45.0%
ATGTTTCCAGCGCTAATGCT+TGG + chr1_3:70739265-70739284 Msa0138020:intron 45.0%
GAAGGTAGTCTGGAAGTTAG+AGG + chr1_3:70739682-70739701 Msa0138020:intron 45.0%
ATGTCACTAACCCGACCTAA+TGG + chr1_3:70739813-70739832 Msa0138020:intron 45.0%
TGTCACTAACCCGACCTAAT+GGG + chr1_3:70739814-70739833 Msa0138020:intron 45.0%
! GAAGCTTTTCCCATTAGGTC+GGG - chr1_3:70739826-70739845 None:intergenic 45.0%
ATCTTCATCTAGTCCCACTC+GGG - chr1_3:70740014-70740033 None:intergenic 45.0%
GCATTGTTTGGGAGTTTGGA+GGG + chr1_3:70740069-70740088 Msa0138020:intron 45.0%
CATTGTTTGGGAGTTTGGAG+GGG + chr1_3:70740070-70740089 Msa0138020:intron 45.0%
TGTGGGGGTGAAAACGTATA+GGG + chr1_3:70740103-70740122 Msa0138020:intron 45.0%
GAGGGATTTGGGAAAAAGGA+AGG - chr1_3:70740368-70740387 None:intergenic 45.0%
TTTGGATCCCCTCATATCAC+TGG + chr1_3:70740624-70740643 Msa0138020:intron 45.0%
TAGCTAGAGGACCTTCATCA+TGG - chr1_3:70740705-70740724 None:intergenic 45.0%
TCTGACAGTTAGACCAACAG+AGG + chr1_3:70740948-70740967 Msa0138020:intron 45.0%
!!! GTTTTGAAGGTGTTGGATCG+TGG + chr1_3:70741243-70741262 Msa0138020:intron 45.0%
!! TTTGAAGGTGTTGGATCGTG+GGG + chr1_3:70741245-70741264 Msa0138020:intron 45.0%
AACGGAAAACTTGCAGTTCC+AGG + chr1_3:70741293-70741312 Msa0138020:CDS 45.0%
TCTCCAAATGAAGCTGATGG+TGG + chr1_3:70741456-70741475 Msa0138020:CDS 45.0%
CTCCAAATGAAGCTGATGGT+GGG + chr1_3:70741457-70741476 Msa0138020:CDS 45.0%
TGAAGCTTGTGCTATACTGC+TGG + chr1_3:70741664-70741683 Msa0138020:three_prime_UTR 45.0%
AGCTGACATAATAACTGGGG+TGG + chr1_3:70741710-70741729 Msa0138020:three_prime_UTR 45.0%
TTTCGACCAAGCATTAGCGC+TGG - chr1_3:70739274-70739293 None:intergenic 50.0%
!! AATCAGGAAGGCACCTGTTG+TGG + chr1_3:70739620-70739639 Msa0138020:intron 50.0%
TCTATCGTCTTGGCCACAAC+AGG - chr1_3:70739636-70739655 None:intergenic 50.0%
ACTCGGGCAATTCAATGGAG+TGG - chr1_3:70739998-70740017 None:intergenic 50.0%
ACTCCATTGAATTGCCCGAG+TGG + chr1_3:70739997-70740016 Msa0138020:intron 50.0%
CTCCATTGAATTGCCCGAGT+GGG + chr1_3:70739998-70740017 Msa0138020:intron 50.0%
GGCATTGTTTGGGAGTTTGG+AGG + chr1_3:70740068-70740087 Msa0138020:intron 50.0%
CTGTGGGGGTGAAAACGTAT+AGG + chr1_3:70740102-70740121 Msa0138020:intron 50.0%
AAGGAACTCGTATAGGGGGA+GGG - chr1_3:70740260-70740279 None:intergenic 50.0%
! TAGAGGACTTTGAGAGGGGA+GGG - chr1_3:70740330-70740349 None:intergenic 50.0%
! ATAGAGGACTTTGAGAGGGG+AGG - chr1_3:70740331-70740350 None:intergenic 50.0%
GGGAAAAAGGAAGGAGCAAG+TGG - chr1_3:70740359-70740378 None:intergenic 50.0%
AGGGGAGGGATTTGGGAAAA+AGG - chr1_3:70740372-70740391 None:intergenic 50.0%
TTTGCGGGTTTGGAAGGCAA+TGG - chr1_3:70740395-70740414 None:intergenic 50.0%
!! GCTTTGTTTGCGGGTTTGGA+AGG - chr1_3:70740401-70740420 None:intergenic 50.0%
TAGAGGACCTTCATCATGGC+TGG - chr1_3:70740701-70740720 None:intergenic 50.0%
GAGACACTAGCACATGGATC+TGG - chr1_3:70740790-70740809 None:intergenic 50.0%
CATGTGCTAGTGTCTCTTCC+CGG + chr1_3:70740794-70740813 Msa0138020:intron 50.0%
TTTAGGCTGACAGCTTCCAG+AGG + chr1_3:70741395-70741414 Msa0138020:intron 50.0%
GGCAGCTAAGAAGGAAGATG+TGG + chr1_3:70741425-70741444 Msa0138020:CDS 50.0%
CTCCCACCATCAGCTTCATT+TGG - chr1_3:70741462-70741481 None:intergenic 50.0%
!! CAAATGAAGCTGATGGTGGG+AGG + chr1_3:70741460-70741479 Msa0138020:CDS 50.0%
TCATGCCATGTGACGCCACA+TGG + chr1_3:70738597-70738616 Msa0138020:intron 55.0%
ATTCTTACCTGGGGGGACTC+AGG + chr1_3:70739553-70739572 Msa0138020:intron 55.0%
GTCCCACTCGGGCAATTCAA+TGG - chr1_3:70740003-70740022 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+TGG + chr1_3:70740075-70740094 Msa0138020:intron 55.0%
GAAGGAACTCGTATAGGGGG+AGG - chr1_3:70740261-70740280 None:intergenic 55.0%
! CTTTGAGAGGGGAGGGCTTT+GGG - chr1_3:70740323-70740342 None:intergenic 55.0%
! ACTTTGAGAGGGGAGGGCTT+TGG - chr1_3:70740324-70740343 None:intergenic 55.0%
GCAATGGAGGGGAGGGATTT+GGG - chr1_3:70740379-70740398 None:intergenic 55.0%
TTGGAAGGCAATGGAGGGGA+GGG - chr1_3:70740386-70740405 None:intergenic 55.0%
TTTGGAAGGCAATGGAGGGG+AGG - chr1_3:70740387-70740406 None:intergenic 55.0%
GGGTTTGGAAGGCAATGGAG+GGG - chr1_3:70740390-70740409 None:intergenic 55.0%
CGGGTTTGGAAGGCAATGGA+GGG - chr1_3:70740391-70740410 None:intergenic 55.0%
CGGGAAGAGACACTAGCACA+TGG - chr1_3:70740796-70740815 None:intergenic 55.0%
!! ATGAAGCTGATGGTGGGAGG+AGG + chr1_3:70741463-70741482 Msa0138020:CDS 55.0%
TTGGGCCATGTGGCGTCACA+TGG - chr1_3:70738605-70738624 None:intergenic 60.0%
GGAGTTTGGAGGGGAGTGGA+GGG + chr1_3:70740079-70740098 Msa0138020:intron 60.0%
GGCAATGGAGGGGAGGGATT+TGG - chr1_3:70740380-70740399 None:intergenic 60.0%
GCGGGTTTGGAAGGCAATGG+AGG - chr1_3:70740392-70740411 None:intergenic 60.0%
CTAGTGTCTCTTCCCGGCCA+TGG + chr1_3:70740800-70740819 Msa0138020:intron 60.0%
GCTGACAGCTTCCAGAGGCA+GGG + chr1_3:70741400-70741419 Msa0138020:CDS 60.0%
AGTGCTTCCTGAGTCCCCCC+AGG - chr1_3:70739563-70739582 None:intergenic 65.0%
GGGAGTTTGGAGGGGAGTGG+AGG + chr1_3:70740078-70740097 Msa0138020:intron 65.0%
!! TGAGAGGGGAGGGCTTTGGG+CGG - chr1_3:70740320-70740339 None:intergenic 65.0%
GCAGAGGGTCTGAGTCCCGT+TGG + chr1_3:70741013-70741032 Msa0138020:intron 65.0%
GGCTGACAGCTTCCAGAGGC+AGG + chr1_3:70741399-70741418 Msa0138020:intron 65.0%
ACAGCTTCCAGAGGCAGGGC+AGG + chr1_3:70741404-70741423 Msa0138020:CDS 65.0%
TTAGCTGCCTGCCCTGCCTC+TGG - chr1_3:70741414-70741433 None:intergenic 65.0%
GGCAGGGCAGGCAGCTAAGA+AGG + chr1_3:70741416-70741435 Msa0138020:CDS 65.0%
TGGAGGGGAGTGGAGGGCTG+TGG + chr1_3:70740085-70740104 Msa0138020:intron 70.0%
GGAGGGGAGTGGAGGGCTGT+GGG + chr1_3:70740086-70740105 Msa0138020:intron 70.0%
GAGGGGAGTGGAGGGCTGTG+GGG + chr1_3:70740087-70740106 Msa0138020:intron 70.0%
AGGGGAGTGGAGGGCTGTGG+GGG + chr1_3:70740088-70740107 Msa0138020:intron 70.0%
!! GAGAGGGGAGGGCTTTGGGC+GGG - chr1_3:70740319-70740338 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 70737900 70741761 70737900 ID=Msa0138020;Name=Msa0138020
chr1_3 mRNA 70737900 70741761 70737900 ID=Msa0138020-mRNA-1;Parent=Msa0138020;Name=Msa0138020-mRNA-1;_AED=0.03;_eAED=0.03;_QI=136|1|1|1|0.6|0.5|6|218|238
chr1_3 exon 70737900 70738019 70737900 ID=Msa0138020-mRNA-1:exon:24545;Parent=Msa0138020-mRNA-1
chr1_3 exon 70738219 70738424 70738219 ID=Msa0138020-mRNA-1:exon:24546;Parent=Msa0138020-mRNA-1
chr1_3 exon 70738797 70738995 70738797 ID=Msa0138020-mRNA-1:exon:24547;Parent=Msa0138020-mRNA-1
chr1_3 exon 70739078 70739198 70739078 ID=Msa0138020-mRNA-1:exon:24548;Parent=Msa0138020-mRNA-1
chr1_3 exon 70741252 70741314 70741252 ID=Msa0138020-mRNA-1:exon:24549;Parent=Msa0138020-mRNA-1
chr1_3 exon 70741400 70741761 70741400 ID=Msa0138020-mRNA-1:exon:24550;Parent=Msa0138020-mRNA-1
chr1_3 five_prime_UTR 70737900 70738019 70737900 ID=Msa0138020-mRNA-1:five_prime_utr;Parent=Msa0138020-mRNA-1
chr1_3 five_prime_UTR 70738219 70738234 70738219 ID=Msa0138020-mRNA-1:five_prime_utr;Parent=Msa0138020-mRNA-1
chr1_3 CDS 70738235 70738424 70738235 ID=Msa0138020-mRNA-1:cds;Parent=Msa0138020-mRNA-1
chr1_3 CDS 70738797 70738995 70738797 ID=Msa0138020-mRNA-1:cds;Parent=Msa0138020-mRNA-1
chr1_3 CDS 70739078 70739198 70739078 ID=Msa0138020-mRNA-1:cds;Parent=Msa0138020-mRNA-1
chr1_3 CDS 70741252 70741314 70741252 ID=Msa0138020-mRNA-1:cds;Parent=Msa0138020-mRNA-1
chr1_3 CDS 70741400 70741543 70741400 ID=Msa0138020-mRNA-1:cds;Parent=Msa0138020-mRNA-1
chr1_3 three_prime_UTR 70741544 70741761 70741544 ID=Msa0138020-mRNA-1:three_prime_utr;Parent=Msa0138020-mRNA-1
Gene Sequence

>Msa0138020

ATGAGTCAAAGGGGTTTGATATATAGCTTTGTTGCCAAAGGAACTGTTGTTTTAGCAGAACACACTCAATATACTGGAAATTTCAGTACCATTGCTGTTCAATGCTTGAATAAGCTTCCTTCAAATAGCACCAAATACACTTATTCTTGTGATGGTCACACCTTCAATTTCCTCTTAGACAATGGATTCGTTTTCCTTGTTGTTGCTGATGAATCAATTGGAAGGAGTGTTCCTTTTGTGTTTTTGGAACGGGTGAAGGATGACTTTAACCAGCGTTATGGTGCTAGTATTAAGAATGCAAGCGACCATCCACTTGCTGATGATGATGAGGACGATGATTTGTTTGAAGATAGATTTAGCATTGCATACAATCTTGATAGAGAATTTGGGCCAAGTCTTAAGGGGCATATGCAGTATTGTTTGACCCATCCTGAAGAAATGAGTAAACTATCAAAGTTGAAGGCTCAAATAACTGAGGTCAAGGGGATAATGATGGATAATATTGAGAAGGTGTTGGATCGTGGGGAGAAGATTGAACTTTTGGTGGATAAAACGGAAAACTTGCAGTTCCAGGCTGACAGCTTCCAGAGGCAGGGCAGGCAGCTAAGAAGGAAGATGTGGCTGCAGAATCTCCAAATGAAGCTGATGGTGGGAGGAGGAATCCTTATCTTAGTTATAATATTATGGGTTATTGCTTGTGGGGGTTTCAAATGTTGA

Protein sequence

>Msa0138020

MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLNKLPSNSTKYTYSCDGHTFNFLLDNGFVFLVVADESIGRSVPFVFLERVKDDFNQRYGASIKNASDHPLADDDEDDDLFEDRFSIAYNLDREFGPSLKGHMQYCLTHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMVGGGILILVIILWVIACGGFKC*