AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1047760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1047760 MtrunA17_Chr7g0215741 92.366 917 5 2 1 852 1 917 0.0 1671
Msa1047760 MtrunA17_Chr1g0183781 30.705 241 151 4 383 623 485 709 6.34e-16 82.4
Msa1047760 MtrunA17_Chr1g0183781 29.197 274 160 9 464 736 476 716 8.89e-14 75.5
Msa1047760 MtrunA17_Chr1g0183781 31.383 188 107 3 570 738 454 638 4.67e-11 66.6
Msa1047760 MtrunA17_Chr3g0106931 34.759 187 100 3 570 737 567 750 6.51e-16 82.4
Msa1047760 MtrunA17_Chr3g0106931 33.702 181 111 4 427 607 593 764 9.36e-13 72.4
Msa1047760 MtrunA17_Chr5g0394261 28.339 307 178 10 447 715 69 371 7.41e-15 79.0
Msa1047760 MtrunA17_Chr7g0261371 30.108 279 179 5 372 650 506 768 9.24e-15 78.6
Msa1047760 MtrunA17_Chr1g0205751 27.922 308 180 9 447 716 72 375 1.43e-13 74.7
Msa1047760 MtrunA17_Chr1g0205751 29.276 304 171 11 421 711 139 411 7.45e-13 72.4
Msa1047760 MtrunA17_Chr7g0245931 30.568 229 144 6 428 649 631 851 3.02e-11 67.4
Msa1047760 MtrunA17_Chr3g0125671 26.129 310 162 11 29 279 29 330 4.22e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1047760 AT2G44900.1 67.884 931 219 11 1 852 1 930 0.0 1187
Msa1047760 AT2G44900.2 67.884 931 219 11 1 852 1 930 0.0 1187
Msa1047760 AT3G60350.1 66.558 918 236 6 1 849 1 916 0.0 1148
Msa1047760 AT3G60350.2 66.558 918 236 6 1 849 1 916 0.0 1148
Msa1047760 AT2G23140.1 28.526 312 185 7 376 687 542 815 1.06e-15 82.4
Msa1047760 AT2G23140.1 33.871 186 101 3 570 736 560 742 5.18e-15 80.1
Msa1047760 AT2G23140.1 28.467 274 162 8 464 736 582 822 1.89e-13 75.1
Msa1047760 AT2G23140.2 28.526 312 185 7 376 687 539 812 1.12e-15 82.0
Msa1047760 AT2G23140.2 33.871 186 101 3 570 736 557 739 5.63e-15 79.7
Msa1047760 AT2G23140.2 28.467 274 162 8 464 736 579 819 2.00e-13 74.7
Msa1047760 AT2G23140.4 28.526 312 185 7 376 687 539 812 1.12e-15 82.0
Msa1047760 AT2G23140.4 33.871 186 101 3 570 736 557 739 5.63e-15 79.7
Msa1047760 AT2G23140.4 28.467 274 162 8 464 736 579 819 2.00e-13 74.7
Msa1047760 AT2G23140.3 28.526 312 185 7 376 687 350 623 3.04e-15 80.5
Msa1047760 AT2G23140.3 33.871 186 101 3 570 736 368 550 1.44e-14 78.2
Msa1047760 AT2G23140.3 28.467 274 162 7 464 736 390 630 4.85e-13 73.6
Msa1047760 AT2G23140.5 28.526 312 185 7 376 687 350 623 3.04e-15 80.5
Msa1047760 AT2G23140.5 33.871 186 101 3 570 736 368 550 1.44e-14 78.2
Msa1047760 AT2G23140.5 28.467 274 162 7 464 736 390 630 4.85e-13 73.6
Msa1047760 AT5G67340.1 30.363 303 166 10 376 674 419 680 8.38e-15 79.3
Msa1047760 AT5G67340.1 27.609 297 174 7 429 719 423 684 7.69e-12 69.7
Msa1047760 AT5G67340.2 30.363 303 166 10 376 674 419 680 8.38e-15 79.3
Msa1047760 AT5G67340.2 27.609 297 174 7 429 719 423 684 7.69e-12 69.7
Msa1047760 AT5G13060.1 27.451 306 178 12 446 712 100 400 1.99e-11 68.2
Msa1047760 AT3G54790.3 28.939 311 184 11 429 736 475 751 7.15e-11 66.6
Msa1047760 AT3G54790.1 28.939 311 184 11 429 736 475 751 7.15e-11 66.6

Find 250 sgRNAs with CRISPR-Local

Find 835 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATAACCTTGACCCTTTCT+AGG 0.202203 7_2:-8836076 Msa1047760:five_prime_UTR
GCTACCTCGTCTTGAATTTC+CGG 0.225698 7_2:+8835508 None:intergenic
CAGATTCACAATGTTTAATA+TGG 0.242241 7_2:+8824134 None:intergenic
TTGGACTTGCAAAATCTTAC+AGG 0.250828 7_2:-8834274 Msa1047760:CDS
CAGCAGAACGCAAAAGTATA+TGG 0.257224 7_2:+8834504 None:intergenic
TGTCCAAAGTTGACCGATAT+CGG 0.258088 7_2:-8834965 Msa1047760:CDS
AAGGAGGTCTTGATAATTTC+TGG 0.260642 7_2:-8834469 Msa1047760:CDS
AGCCGGTGCATTGGCTAATT+TGG 0.264614 7_2:-8833384 Msa1047760:CDS
TCAAGACGAGGTAGCGGATT+TGG 0.278515 7_2:-8835500 Msa1047760:CDS
AGAGGGCTGCTGGTGCTCTA+TGG 0.285448 7_2:-8831049 Msa1047760:CDS
TCCGTGTTTGTGGAGTTCTT+TGG 0.294608 7_2:-8835347 Msa1047760:CDS
AAGAGGCTGCTGGAGGATTA+TGG 0.296566 7_2:-8833707 Msa1047760:CDS
TCTAAAAGTGTGGGCTTAGA+TGG 0.311586 7_2:-8825557 Msa1047760:CDS
AGAGAGAGAATTACAGCATT+AGG 0.316635 7_2:+8836205 None:intergenic
CTATCACAGTTTACAATTCC+CGG 0.324291 7_2:-8824360 Msa1047760:intron
AAATAAGCGGTGATGGTTGC+AGG 0.325975 7_2:-8835189 Msa1047760:CDS
GTGTTTCAGAGCCATTCTTC+TGG 0.327454 7_2:+8825532 None:intergenic
ATCAGTGAGCAGTGTTCTTA+TGG 0.336623 7_2:+8824076 None:intergenic
CTTAAGCTTCCTAACCTGAT+TGG 0.337567 7_2:-8834833 Msa1047760:CDS
GTTCGTTTCCTTTCTGTTGC+GGG 0.339182 7_2:-8834890 Msa1047760:CDS
CTAAACTAGACTAGGCAAAT+TGG 0.340409 7_2:-8823907 Msa1047760:three_prime_UTR
TGAAAGGGGTAAGGGGTGAT+TGG 0.348179 7_2:+8836123 None:intergenic
GAATGTGTAGGTGTTGAATT+TGG 0.353384 7_2:-8835611 Msa1047760:intron
AACCTTGAGCTCAAGCTATA+TGG 0.357278 7_2:+8835943 None:intergenic
CTTTCTGCATGAGGCTGGCA+TGG 0.367297 7_2:+8824319 None:intergenic
GATTGAGATCCTTGCTAGTT+TGG 0.373786 7_2:-8833757 Msa1047760:CDS
TAGGTTTCGTGGCGCGGATT+CGG 0.380545 7_2:-8835251 Msa1047760:CDS
GCTTTGGCCTACATGTTTGA+TGG 0.382480 7_2:-8826159 Msa1047760:CDS
CTTTCCTCTATTTGTATTGT+CGG 0.385870 7_2:+8834613 None:intergenic
ATTTATGGCAGCACTGGCTT+TGG 0.385965 7_2:-8826175 Msa1047760:CDS
TGGAATCTTGCTTTCAATCC+TGG 0.390367 7_2:-8826279 Msa1047760:CDS
CTTCAGAAGCTTAGGTTTCG+TGG 0.392300 7_2:-8835262 Msa1047760:CDS
CAATGAAATCAATGAACAAA+AGG 0.394471 7_2:+8836002 None:intergenic
CTACCTCGTCTTGAATTTCC+GGG 0.397057 7_2:+8835509 None:intergenic
TTCAAAGACTTACAATGATA+AGG 0.402877 7_2:-8834567 Msa1047760:CDS
GAAAGGGGTAAGGGGTGATT+GGG 0.405159 7_2:+8836124 None:intergenic
GAGTTCTCAAGAGGATGTTC+AGG 0.405172 7_2:-8834408 Msa1047760:CDS
TTGAAACATCTAATCCAATC+AGG 0.407487 7_2:+8834819 None:intergenic
ACCTGCTTTCTGCATGAGGC+TGG 0.408674 7_2:+8824314 None:intergenic
GTGTGCATCTTCAGAAGCTT+AGG 0.411198 7_2:-8835270 Msa1047760:CDS
AAGCTGGAGGAGTTGTTGAT+TGG 0.411218 7_2:-8835477 Msa1047760:CDS
CTTGACCCTTTCTAGGGTCT+AGG 0.412942 7_2:-8836069 Msa1047760:five_prime_UTR
GAGTTATAAATTGACAAGTT+TGG 0.412956 7_2:-8824035 Msa1047760:three_prime_UTR
AAAAGCTAGTCTCTTCTTCA+AGG 0.417148 7_2:+8834711 None:intergenic
TGGTAATGCTTTACGAATAG+TGG 0.425271 7_2:-8826259 Msa1047760:CDS
AAACGGCTGCAGGAGCGTTA+TGG 0.427721 7_2:-8826299 Msa1047760:CDS
CTTGGCTACATTGGCATTCA+CGG 0.429005 7_2:+8833800 None:intergenic
AGGAGGTCTTGATAATTTCT+GGG 0.431465 7_2:-8834468 Msa1047760:CDS
AAATCATACCTTGGCTTGAA+TGG 0.433133 7_2:-8834535 Msa1047760:CDS
GAGAGAGAATTACAGCATTA+GGG 0.433730 7_2:+8836206 None:intergenic
GAGGGCTGCTGGTGCTCTAT+GGG 0.437956 7_2:-8831048 Msa1047760:CDS
AGCCTGAGTTTCATCAAACT+TGG 0.438776 7_2:+8835040 None:intergenic
GTGCACAGCGTGTCGTCCAC+CGG 0.440292 7_2:+8824341 None:intergenic
ATATTCAAGTGGTCCTCTAC+TGG 0.440818 7_2:-8833527 Msa1047760:CDS
AGTACAGAGGTTGCGTTAGC+AGG 0.441174 7_2:-8833344 Msa1047760:CDS
GTAACCTGTGCTAGTGCTGC+AGG 0.445306 7_2:+8825443 None:intergenic
ACCACACTCCACTTCATACT+TGG 0.446525 7_2:+8834863 None:intergenic
AAAATCGAAGCTGGTTGAAA+AGG 0.449627 7_2:+8836031 None:intergenic
GCCCTCTTCTGCAACCGCCT+TGG 0.449694 7_2:+8833782 None:intergenic
GGCACGATTTATGGCAGCAC+TGG 0.454750 7_2:-8826181 Msa1047760:CDS
TGTAAGACATGGAGGGTTCT+CGG 0.457422 7_2:-8835376 Msa1047760:CDS
GCCAGCCTCATGCAGAAAGC+AGG 0.458060 7_2:-8824315 Msa1047760:CDS
TGCAACCGCCTTGGCTACAT+TGG 0.461385 7_2:+8833791 None:intergenic
TCAAAGACTTACAATGATAA+GGG 0.461471 7_2:-8834566 Msa1047760:CDS
CTGCACCTGCTTTCTGCATG+AGG 0.462938 7_2:+8824310 None:intergenic
TGTCAGTTTCTGAAGCCAAC+AGG 0.462984 7_2:-8831022 Msa1047760:intron
ACATCTAATCCAATCAGGTT+AGG 0.463832 7_2:+8834824 None:intergenic
CGCTCGTCACTGCAAATTCG+AGG 0.465149 7_2:-8833297 Msa1047760:CDS
GTCCAAAGTTGACCGATATC+GGG 0.465471 7_2:-8834964 Msa1047760:CDS
CTTTGGCCTACATGTTTGAT+GGG 0.465851 7_2:-8826158 Msa1047760:CDS
AGCTGAATTACTGTATCATC+AGG 0.466586 7_2:+8835445 None:intergenic
GAGGTAGCGGATTTGGAAGC+TGG 0.467114 7_2:-8835493 Msa1047760:CDS
CCACTTTCCTCCTCACTCTA+CGG 0.467553 7_2:+8835566 None:intergenic
AACTCCACCAGCTGCTGCAA+TGG 0.467663 7_2:+8831489 None:intergenic
CATAACCTTGACCCTTTCTA+GGG 0.468179 7_2:-8836075 Msa1047760:five_prime_UTR
AGCTGGAGTTTCATTCATAT+AGG 0.468216 7_2:-8836267 Msa1047760:five_prime_UTR
GGACTTCAAGAGAGGGCTGC+TGG 0.471783 7_2:-8831059 Msa1047760:intron
TCGGTAACTCTCCGTGTTTG+TGG 0.473402 7_2:-8835357 Msa1047760:CDS
GAAGCTTAGGTTTCGTGGCG+CGG 0.475508 7_2:-8835257 Msa1047760:CDS
AACCATATAGCTTGAGCTCA+AGG 0.475926 7_2:-8835945 Msa1047760:intron
GTTCTGCCCATGAGGGTGTC+AGG 0.476729 7_2:-8832315 Msa1047760:intron
TAGGGACGAAGAAGAGAGAA+TGG 0.476896 7_2:+8836224 None:intergenic
GGTAAGGGGTGATTGGGATG+AGG 0.477176 7_2:+8836130 None:intergenic
CGAGAGGCCATTGCAGCAGC+TGG 0.477761 7_2:-8831496 Msa1047760:intron
AACCCGATATCGGTCAACTT+TGG 0.481042 7_2:+8834962 None:intergenic
AGCAAGTGAAGCTGCAACAT+TGG 0.481223 7_2:+8835300 None:intergenic
AGTGTTGACGAGCTTGCATT+GGG 0.481835 7_2:-8834926 Msa1047760:CDS
CTGGAGGAGTTGTTGATTGG+AGG 0.482094 7_2:-8835474 Msa1047760:CDS
GGTGGCATACGCCTCCTCCT+TGG 0.482683 7_2:-8834293 Msa1047760:CDS
TGGTGGAGTACAAGCTTTAG+TGG 0.484189 7_2:-8833555 Msa1047760:CDS
TAGGGTGCCATTGCGGAAGC+TGG 0.484949 7_2:-8833575 Msa1047760:CDS
TATCAAGACCTCCTTGTTGA+GGG 0.485857 7_2:+8834477 None:intergenic
GGATTATGGAATCTCTCTGT+TGG 0.489400 7_2:-8833693 Msa1047760:CDS
AAAATAAATTACCTCCGCTT+CGG 0.489578 7_2:+8827179 None:intergenic
AGCAGAACGCAAAAGTATAT+GGG 0.489774 7_2:+8834505 None:intergenic
CTCTACTGGAGATGGAGTAT+TGG 0.494207 7_2:-8833513 Msa1047760:intron
TTCTATAGGCAAGAAGCTGC+TGG 0.498021 7_2:-8831553 Msa1047760:intron
TGCATTGGGAAATGTGCAAT+CGG 0.498709 7_2:-8834912 Msa1047760:CDS
GAAAGGGTCAAGGTTATGAA+TGG 0.499204 7_2:+8836080 None:intergenic
CTTCGAATGAAGAAGTGAAA+GGG 0.499272 7_2:+8836108 None:intergenic
ATGAAGAAGTGAAAGGGGTA+AGG 0.499693 7_2:+8836114 None:intergenic
GGCTAGGTCAATGAACAAAC+TGG 0.500144 7_2:-8833736 Msa1047760:CDS
GGTTCGTTTCCTTTCTGTTG+CGG 0.502160 7_2:-8834891 Msa1047760:CDS
ATGGATGAATTTGCTTTAGT+CGG 0.502695 7_2:-8825599 Msa1047760:CDS
ACACTAGGCTGCTCGTGCAT+TGG 0.504597 7_2:-8832428 Msa1047760:intron
TTACTTGAGAGTCTTGTGCT+TGG 0.506161 7_2:-8835121 Msa1047760:CDS
GGAACGTGCAGCCGGTGCAT+TGG 0.507712 7_2:-8833393 Msa1047760:CDS
GATGTTTCAAGAACTGATAT+CGG 0.510476 7_2:-8834806 Msa1047760:CDS
ATACCTTAGCTGCCTCAGAC+TGG 0.511005 7_2:+8834243 None:intergenic
TGTTTGCTCAGCATTGCCAT+TGG 0.512065 7_2:-8827243 Msa1047760:intron
CTTCCAGGATGTTCATGAAA+CGG 0.514447 7_2:-8826316 Msa1047760:intron
TTCGAGAGGCGCAGTTGCTG+CGG 0.515167 7_2:+8824263 None:intergenic
TTTGATGAAACTCAGGCTCT+CGG 0.515939 7_2:-8835035 Msa1047760:CDS
GCAATCAAAACTCTCAAACT+TGG 0.517958 7_2:+8834749 None:intergenic
TTGATGAAACTCAGGCTCTC+GGG 0.518137 7_2:-8835034 Msa1047760:CDS
AGGCGGTTGCAGAAGAGGGC+GGG 0.518199 7_2:-8833779 Msa1047760:CDS
AGCTCCTGCAGCACTAGCAC+AGG 0.518485 7_2:-8825447 Msa1047760:intron
AGATCCTTGCTAGTTTGGCT+AGG 0.519367 7_2:-8833752 Msa1047760:CDS
AGGAGGAAAGTGGCAAGAAA+AGG 0.519878 7_2:-8835556 Msa1047760:CDS
GTTCAGGAGAGGGCGGCCAC+AGG 0.520429 7_2:-8834392 Msa1047760:CDS
AGCCAAGGCGGTTGCAGAAG+AGG 0.521393 7_2:-8833784 Msa1047760:CDS
GCAGTCGATGAACCCGATAT+CGG 0.522332 7_2:+8834952 None:intergenic
CTAGTCTCTTCTTCAAGGAT+AGG 0.522484 7_2:+8834716 None:intergenic
CGTTGCACCTCTGATTGCAT+TGG 0.523124 7_2:-8827208 Msa1047760:CDS
AGGGACGAAGAAGAGAGAAT+GGG 0.523615 7_2:+8836225 None:intergenic
CTTGTTGATTAGAAAACATA+CGG 0.524937 7_2:+8825495 None:intergenic
TGAAGAAGTGAAAGGGGTAA+GGG 0.525940 7_2:+8836115 None:intergenic
TGCCGATGCTATTAACGCAT+TGG 0.526431 7_2:-8834996 Msa1047760:CDS
TAGTGTTGACGAGCTTGCAT+TGG 0.526608 7_2:-8834927 Msa1047760:CDS
GATGTTCATGAAACGGCTGC+AGG 0.527892 7_2:-8826309 Msa1047760:CDS
TTGGCAAATTTAGCCGCTCA+TGG 0.528514 7_2:-8832409 Msa1047760:CDS
GGTGATTGGGATGAGGAAGA+TGG 0.529068 7_2:+8836137 None:intergenic
AAATCGAAGCTGGTTGAAAA+GGG 0.532522 7_2:+8836032 None:intergenic
CTCAAGAGGATGTTCAGGAG+AGG 0.532960 7_2:-8834403 Msa1047760:CDS
AAGTGGTCCTCTACTGGAGA+TGG 0.533230 7_2:-8833521 Msa1047760:CDS
AAGAAGCTGCTGGTGCACTT+TGG 0.534521 7_2:-8831543 Msa1047760:CDS
GAACAAACTGGTGGCTGAAG+AGG 0.535905 7_2:-8833724 Msa1047760:CDS
CTTAGATGGAGCCAGAAGAA+TGG 0.536130 7_2:-8825543 Msa1047760:CDS
TTATCAAGACCTCCTTGTTG+AGG 0.538406 7_2:+8834476 None:intergenic
GCCAAGGCGGTTGCAGAAGA+GGG 0.540692 7_2:-8833783 Msa1047760:CDS
ATTGAACCTAGACCCTAGAA+AGG 0.541623 7_2:+8836063 None:intergenic
AATGAAATCAATGAACAAAA+GGG 0.542636 7_2:+8836003 None:intergenic
GTCCAAGTTTGATGAAACTC+AGG 0.543484 7_2:-8835042 Msa1047760:CDS
AACTCTCAAACTTGGTGATG+AGG 0.543781 7_2:+8834757 None:intergenic
TGCACAGCGTGTCGTCCACC+GGG 0.545319 7_2:+8824342 None:intergenic
GTAACAATATTTGAATGTCA+AGG 0.546326 7_2:-8823930 Msa1047760:three_prime_UTR
ATGAGGAAGATGGTTGATGA+AGG 0.547634 7_2:+8836147 None:intergenic
AACGCCTCCTTCTCGTCCAA+TGG 0.551768 7_2:+8827227 None:intergenic
GAAGAAGTGAAAGGGGTAAG+GGG 0.552643 7_2:+8836116 None:intergenic
AGCATTGCCATTGGACGAGA+AGG 0.552699 7_2:-8827234 Msa1047760:CDS
GGGACGAAGAAGAGAGAATG+GGG 0.556533 7_2:+8836226 None:intergenic
ATTCGAGGGAGTGCAAGAGC+AGG 0.557307 7_2:-8833282 Msa1047760:intron
AAGAACTTGCGCGAAATAAG+CGG 0.559125 7_2:-8835202 Msa1047760:CDS
AAGATTACCTGACACCCTCA+TGG 0.560437 7_2:+8832308 None:intergenic
CTGGTGGCTGAAGAGGCTGC+TGG 0.560581 7_2:-8833717 Msa1047760:CDS
TGTCAAGGCTAAACTAGACT+AGG 0.562998 7_2:-8823915 Msa1047760:three_prime_UTR
AACAGTAACAATGCTGCTGT+TGG 0.563505 7_2:-8832379 Msa1047760:CDS
AGCCAATGCGTTAATAGCAT+CGG 0.564067 7_2:+8834994 None:intergenic
GATAATTTCTGGGTTGAACA+AGG 0.565952 7_2:-8834458 Msa1047760:CDS
ATGCAAGCTCGTCAACACTA+AGG 0.569674 7_2:+8834930 None:intergenic
ATGCTAGCATCGATTGTGGA+AGG 0.570060 7_2:-8834337 Msa1047760:CDS
ACTCAGGCTCTCGGGCATCA+GGG 0.571116 7_2:-8835026 Msa1047760:CDS
GCTGCTGTTGGACAAGAAGC+AGG 0.571322 7_2:-8832367 Msa1047760:CDS
AGCCAAATTAGCCAATGCAC+CGG 0.572420 7_2:+8833382 None:intergenic
TTGCGCGAAATAAGCGGTGA+TGG 0.574143 7_2:-8835196 Msa1047760:CDS
TTCGTTTCCTTTCTGTTGCG+GGG 0.574999 7_2:-8834889 Msa1047760:CDS
CCGTAGAGTGAGGAGGAAAG+TGG 0.575650 7_2:-8835566 Msa1047760:CDS
GAGAGTGTTTCTAAAAGTGT+GGG 0.576956 7_2:-8825566 Msa1047760:CDS
GCTTCGAATGAAGAAGTGAA+AGG 0.577019 7_2:+8836107 None:intergenic
ACTATTCGTAAAGCATTACC+AGG 0.577346 7_2:+8826261 None:intergenic
TGCAGGAGCTGACGATGAAG+CGG 0.579277 7_2:+8825460 None:intergenic
CAGGGAAGGGCTCCAGTCTG+AGG 0.579420 7_2:-8834255 Msa1047760:CDS
TTGCAAAATCTTACAGGGAA+GGG 0.581500 7_2:-8834268 Msa1047760:CDS
AAATGCGGTTTCGAGTTGCC+CGG 0.583026 7_2:-8835527 Msa1047760:CDS
TCTTATGCAGAGTTCTCAAG+AGG 0.583305 7_2:-8834417 Msa1047760:CDS
GCCTTGATGAAATCATACCT+TGG 0.583411 7_2:-8834544 Msa1047760:CDS
TTGGTGTCCCCGCAACAGAA+AGG 0.583600 7_2:+8834882 None:intergenic
AGAGAGTGTTTCTAAAAGTG+TGG 0.586120 7_2:-8825567 Msa1047760:CDS
GGTGCCATTGCGGAAGCTGG+TGG 0.586880 7_2:-8833572 Msa1047760:CDS
TAGTGGATCTTATATTCAAG+TGG 0.587876 7_2:-8833538 Msa1047760:CDS
TTGAACCTAGACCCTAGAAA+GGG 0.588080 7_2:+8836064 None:intergenic
TGGCCTACATGTTTGATGGG+AGG 0.588708 7_2:-8826155 Msa1047760:intron
AAGGCGGTTGCAGAAGAGGG+CGG 0.588940 7_2:-8833780 Msa1047760:CDS
CTCTGTTGGAGAAGAGCACA+AGG 0.589490 7_2:-8833679 Msa1047760:intron
TGAGGAAGATGGTTGATGAA+GGG 0.591482 7_2:+8836148 None:intergenic
CGGGGACACCAAGTATGAAG+TGG 0.592556 7_2:-8834871 Msa1047760:CDS
AGGGTAGTGAAAATCGAAGC+TGG 0.593494 7_2:+8836022 None:intergenic
CTTGCAAAATCTTACAGGGA+AGG 0.596928 7_2:-8834269 Msa1047760:CDS
CTCTTGCTGTGGTTGTAGCA+CGG 0.597578 7_2:-8835150 Msa1047760:CDS
GAGATTACGAAGAACAATCC+TGG 0.598816 7_2:+8824227 None:intergenic
GAGAGGCGCAGTTGCTGCGG+CGG 0.599511 7_2:+8824266 None:intergenic
GCTCGTCACTGCAAATTCGA+GGG 0.601410 7_2:-8833296 Msa1047760:CDS
GGAAATTCAAGACGAGGTAG+CGG 0.602395 7_2:-8835506 Msa1047760:CDS
AGATTACCTGACACCCTCAT+GGG 0.602576 7_2:+8832309 None:intergenic
TCAAGAGGATGTTCAGGAGA+GGG 0.604083 7_2:-8834402 Msa1047760:CDS
TATCAGCAACTTGTAAGACA+TGG 0.605135 7_2:-8835387 Msa1047760:CDS
TTTAGAAACACTCTCTGACA+TGG 0.607005 7_2:+8825574 None:intergenic
TACTCCACCAGCTTCCGCAA+TGG 0.607253 7_2:+8833568 None:intergenic
ACAAGAAGCAGGTGCTCTCG+AGG 0.609312 7_2:-8832356 Msa1047760:CDS
GAAATATGAGCCGTAGAGTG+AGG 0.609821 7_2:-8835576 Msa1047760:exon
GAAAATGCTAGCATCGATTG+TGG 0.609998 7_2:-8834341 Msa1047760:CDS
CGTGAATGCCAATGTAGCCA+AGG 0.610171 7_2:-8833799 Msa1047760:CDS
CAATACTCCATCTCCAGTAG+AGG 0.610529 7_2:+8833514 None:intergenic
TCCAAAGAACTCCACAAACA+CGG 0.610547 7_2:+8835346 None:intergenic
ACTTACGCGTTCTGCCCATG+AGG 0.612573 7_2:-8832323 Msa1047760:CDS
TGGACTTGCAAAATCTTACA+GGG 0.614434 7_2:-8834273 Msa1047760:CDS
TTGACCTAGCCAAACTAGCA+AGG 0.614745 7_2:+8833748 None:intergenic
AGGGCTGCTGGTGCTCTATG+GGG 0.614975 7_2:-8831047 Msa1047760:CDS
GCTGAAGCAGTTATGCGAGA+TGG 0.616153 7_2:-8834314 Msa1047760:CDS
GCCAAGGTATGATTTCATCA+AGG 0.618337 7_2:+8834543 None:intergenic
TGCTAGCATCGATTGTGGAA+GGG 0.618447 7_2:-8834336 Msa1047760:CDS
GACTGATGCAACTCTTGCTG+TGG 0.620847 7_2:-8835161 Msa1047760:CDS
ATTGCCATTGGACGAGAAGG+AGG 0.624617 7_2:-8827231 Msa1047760:CDS
CAGCAACTTGTAAGACATGG+AGG 0.625029 7_2:-8835384 Msa1047760:CDS
GAAGCAGTTATGCGAGATGG+TGG 0.625950 7_2:-8834311 Msa1047760:CDS
TTACCTCCCATCAAACATGT+AGG 0.626697 7_2:+8826152 None:intergenic
ACAGAGGTTGCGTTAGCAGG+AGG 0.626824 7_2:-8833341 Msa1047760:CDS
GCTTTACGAATAGTGGAGGA+AGG 0.627288 7_2:-8826252 Msa1047760:CDS
GATAGCATCCATTCAAGCCA+AGG 0.627816 7_2:+8834527 None:intergenic
AGCAACTTGTAAGACATGGA+GGG 0.634490 7_2:-8835383 Msa1047760:CDS
TGCATTGGCACGATCCGAAG+CGG 0.637113 7_2:-8827193 Msa1047760:CDS
AAAGTGGCAAGAAAAGGCAA+AGG 0.642105 7_2:-8835550 Msa1047760:CDS
TTACGAATAGTGGAGGAAGG+TGG 0.643179 7_2:-8826249 Msa1047760:CDS
AACAATCTTGAAACAGCAGA+CGG 0.649842 7_2:+8834782 None:intergenic
ACCAAGTATGAAGTGGAGTG+TGG 0.652485 7_2:-8834864 Msa1047760:CDS
AAGAAAAGGCAAAGGAAATG+CGG 0.654437 7_2:-8835542 Msa1047760:CDS
CTGCATAAGACTAAGCAAGA+GGG 0.655891 7_2:+8834430 None:intergenic
GATCGTGCCAATGCAATCAG+AGG 0.656467 7_2:+8827201 None:intergenic
TCTGCATAAGACTAAGCAAG+AGG 0.657080 7_2:+8834429 None:intergenic
TTCGAATGAAGAAGTGAAAG+GGG 0.657774 7_2:+8836109 None:intergenic
TAATGCTTTACGAATAGTGG+AGG 0.660100 7_2:-8826256 Msa1047760:CDS
ATTGGCACGATCCGAAGCGG+AGG 0.660754 7_2:-8827190 Msa1047760:intron
CTAGACCCTAGAAAGGGTCA+AGG 0.661345 7_2:+8836070 None:intergenic
GTGGCTGAAGAGGCTGCTGG+AGG 0.664693 7_2:-8833714 Msa1047760:CDS
TCCATCATAGGGTGCCATTG+CGG 0.669098 7_2:-8833582 Msa1047760:intron
AACAAAAGTTGCAAGACCTG+TGG 0.669195 7_2:+8834376 None:intergenic
GCAGTGTTCTTATGGCAAGT+CGG 0.669989 7_2:+8824084 None:intergenic
AGAGGATGTTCAGGAGAGGG+CGG 0.671172 7_2:-8834399 Msa1047760:CDS
ACTGTTGCTATCGCCATGAG+CGG 0.672178 7_2:+8832396 None:intergenic
ATATGAGCCGTAGAGTGAGG+AGG 0.677214 7_2:-8835573 Msa1047760:CDS
CATAAGACTAAGCAAGAGGG+AGG 0.677342 7_2:+8834433 None:intergenic
TCTGCTGAGAGCCCTCAACA+AGG 0.681430 7_2:-8834488 Msa1047760:CDS
ATTTGACGATAGAAATCGAG+AGG 0.681882 7_2:-8831512 Msa1047760:CDS
GTAGCGGATTTGGAAGCTGG+AGG 0.694066 7_2:-8835490 Msa1047760:CDS
TTGCCCGGAAATTCAAGACG+AGG 0.703340 7_2:-8835512 Msa1047760:CDS
GCTGAGAGCCCTCAACAAGG+AGG 0.704339 7_2:-8834485 Msa1047760:CDS
TCACAGTTTACAATTCCCGG+TGG 0.705352 7_2:-8824357 Msa1047760:intron
TAGGTCAATGAACAAACTGG+TGG 0.722298 7_2:-8833733 Msa1047760:CDS
GAATGCCAATGTAGCCAAGG+CGG 0.732090 7_2:-8833796 Msa1047760:CDS
TGATGACAAGTGCAGTACAG+AGG 0.766203 7_2:-8833357 Msa1047760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAA+GGG + chr7_2:8835660-8835679 None:intergenic 0.0%
!! TATATATATATATATATATA+AGG + chr7_2:8835661-8835680 None:intergenic 0.0%
!!! AATAAAGACAATTTTTTTAT+TGG - chr7_2:8824186-8824205 Msa1047760:exon 10.0%
!!! CCATTTTTTAAAATAATTAT+CGG + chr7_2:8826031-8826050 None:intergenic 10.0%
!!! ACATTTCATTTAAATTTTAA+TGG - chr7_2:8827457-8827476 Msa1047760:intron 10.0%
!!! TTTTTATGTATCAAATTATT+AGG + chr7_2:8827956-8827975 None:intergenic 10.0%
!!! TAAAAAGATTGATTTTATTT+TGG + chr7_2:8828896-8828915 None:intergenic 10.0%
!!! AAATAAAATCAATCTTTTTA+TGG - chr7_2:8828896-8828915 Msa1047760:intron 10.0%
!! TTAGATTAATATATATTCTT+TGG - chr7_2:8832467-8832486 Msa1047760:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGAG+AGG - chr7_2:8834074-8834093 Msa1047760:intron 10.0%
!! GAAATAAATTATAATAAATG+TGG + chr7_2:8834342-8834361 None:intergenic 10.0%
!!! TATTTTGTTGTATATTGAAT+TGG - chr7_2:8824250-8824269 Msa1047760:CDS 15.0%
!!! ATTTTGTTGTATATTGAATT+GGG - chr7_2:8824251-8824270 Msa1047760:CDS 15.0%
!! CAAGTAAAAGTTATTAAAAA+TGG + chr7_2:8825920-8825939 None:intergenic 15.0%
!!! CCGATAATTATTTTAAAAAA+TGG - chr7_2:8826028-8826047 Msa1047760:intron 15.0%
!! AATCGAATAAGAATAATAAA+GGG + chr7_2:8827100-8827119 None:intergenic 15.0%
!! AAATCGAATAAGAATAATAA+AGG + chr7_2:8827101-8827120 None:intergenic 15.0%
!!! TATTATTCTTATTCGATTTT+TGG - chr7_2:8827102-8827121 Msa1047760:intron 15.0%
!!! TTTAAATTTTAATGGAAATG+TGG - chr7_2:8827465-8827484 Msa1047760:intron 15.0%
!!! AATTCCTATATTTTCAATAA+AGG + chr7_2:8827870-8827889 None:intergenic 15.0%
!! TAATTTGATACATAAAAACA+AGG - chr7_2:8827958-8827977 Msa1047760:intron 15.0%
!!! ATGAATTTTCATATAGTTTA+GGG - chr7_2:8828771-8828790 Msa1047760:intron 15.0%
!!! AAATTATTCTGATAGATTTT+AGG + chr7_2:8831548-8831567 None:intergenic 15.0%
!! GAAAAAAAATAACATACAAA+AGG + chr7_2:8832675-8832694 None:intergenic 15.0%
!! TAATAGTTGTTTATAATAAG+TGG - chr7_2:8833158-8833177 Msa1047760:intron 15.0%
!! ATGTCTAAAAAAATTAAGAT+GGG + chr7_2:8833732-8833751 None:intergenic 15.0%
!! ATACAAAGTAAATATTGAAA+AGG - chr7_2:8834274-8834293 Msa1047760:CDS 15.0%
!! ATCAACTATTAGTATAAATA+AGG - chr7_2:8834379-8834398 Msa1047760:CDS 15.0%
!! TTAATCAGTAAAATGAATAT+TGG - chr7_2:8834411-8834430 Msa1047760:CDS 15.0%
!!! TTTAATATGGTTTTAGAAAA+TGG + chr7_2:8835957-8835976 None:intergenic 15.0%
!! AATGAAATCAATGAACAAAA+GGG + chr7_2:8824101-8824120 None:intergenic 20.0%
!!! TTTTAGCTTGATATAAATTC+TGG - chr7_2:8824219-8824238 Msa1047760:CDS 20.0%
!!! TTTAGCTTGATATAAATTCT+GGG - chr7_2:8824220-8824239 Msa1047760:CDS 20.0%
!!! ATTGATTTTGATGTATGATT+AGG - chr7_2:8824322-8824341 Msa1047760:CDS 20.0%
!!! TTGATTTTGATGTATGATTA+GGG - chr7_2:8824323-8824342 Msa1047760:CDS 20.0%
!!! TTTAAAAATATCGGTTGATA+GGG + chr7_2:8825449-8825468 None:intergenic 20.0%
!!! TACAATGATTTTGTTTTTTC+AGG - chr7_2:8826687-8826706 Msa1047760:intron 20.0%
!! GTAGTAATACTCTATAATTT+GGG - chr7_2:8826841-8826860 Msa1047760:intron 20.0%
!!! TGATATTTGAACAACTATTT+TGG + chr7_2:8827369-8827388 None:intergenic 20.0%
!!! TTTGTTTTTTACATTTGTGT+CGG - chr7_2:8827819-8827838 Msa1047760:intron 20.0%
!! TATGCCTTTATTGAAAATAT+AGG - chr7_2:8827863-8827882 Msa1047760:intron 20.0%
!! TTGAAAATATAGGAATTAGA+TGG - chr7_2:8827873-8827892 Msa1047760:intron 20.0%
!! TCATAATATTTGTTCTTTGA+TGG - chr7_2:8827982-8828001 Msa1047760:intron 20.0%
!! TCATAATCAATTGTATTGTT+AGG + chr7_2:8828275-8828294 None:intergenic 20.0%
!!! GATGAATTTTCATATAGTTT+AGG - chr7_2:8828770-8828789 Msa1047760:intron 20.0%
!!! GATTGATTTTATTTTGGAAA+AGG + chr7_2:8828890-8828909 None:intergenic 20.0%
!!! CATATATTTATGCTTTTACA+TGG - chr7_2:8828971-8828990 Msa1047760:intron 20.0%
!! TATTGTCAGAATGAAATAAA+TGG + chr7_2:8829117-8829136 None:intergenic 20.0%
!! TGTAATGATCCTATATTTAT+TGG - chr7_2:8829244-8829263 Msa1047760:intron 20.0%
!! GTAATGATCCTATATTTATT+GGG - chr7_2:8829245-8829264 Msa1047760:intron 20.0%
!!! AAATTATTTTCCGATATATG+GGG + chr7_2:8829309-8829328 None:intergenic 20.0%
!!! GAAATTATTTTCCGATATAT+GGG + chr7_2:8829310-8829329 None:intergenic 20.0%
!!! TTGGTTTTTACAATTAAAGA+TGG - chr7_2:8830065-8830084 Msa1047760:intron 20.0%
!!! CATTTTTGATACTTCAAAAA+AGG + chr7_2:8830151-8830170 None:intergenic 20.0%
!! TCTTCTATATCTTCTATATT+GGG + chr7_2:8830765-8830784 None:intergenic 20.0%
!! ATCTTCTATATCTTCTATAT+TGG + chr7_2:8830766-8830785 None:intergenic 20.0%
!!! GTAGAAATCACTAATTTTAT+TGG - chr7_2:8831281-8831300 Msa1047760:intron 20.0%
!!! TTTGGTTTATTGATAATGTT+GGG - chr7_2:8831759-8831778 Msa1047760:intron 20.0%
!!! AAAATCACATAAATTGATTC+TGG + chr7_2:8831845-8831864 None:intergenic 20.0%
!! AAATTGATCTAATCAAACTT+GGG + chr7_2:8832121-8832140 None:intergenic 20.0%
!! TAAATTGATCTAATCAAACT+TGG + chr7_2:8832122-8832141 None:intergenic 20.0%
!!! TTTTTTCCAATATAGTGTTT+AGG - chr7_2:8832426-8832445 Msa1047760:intron 20.0%
!! ATATATTCTTTGGTATTCTT+TGG - chr7_2:8832477-8832496 Msa1047760:intron 20.0%
!!! ACTTCTTTTTTCTATGTTTT+TGG + chr7_2:8832587-8832606 None:intergenic 20.0%
!! ATAAATCTTCCATTAAAGTA+AGG + chr7_2:8832722-8832741 None:intergenic 20.0%
!!! AATGGAAGATTTATACATTT+TGG - chr7_2:8832728-8832747 Msa1047760:intron 20.0%
!! TAAATTGTCAATTATCACTT+GGG + chr7_2:8832790-8832809 None:intergenic 20.0%
!! TTAAATTGTCAATTATCACT+TGG + chr7_2:8832791-8832810 None:intergenic 20.0%
!! ATGTTAACATTCATTTATGT+TGG - chr7_2:8832831-8832850 Msa1047760:intron 20.0%
!! TCAAATAAACATATAGACAT+TGG + chr7_2:8832956-8832975 None:intergenic 20.0%
!! CATGTCTAAAAAAATTAAGA+TGG + chr7_2:8833733-8833752 None:intergenic 20.0%
!! TTAAAATTAGAGAAGTCTTA+CGG - chr7_2:8834041-8834060 Msa1047760:intron 20.0%
!! TCAATATTTACTTTGTATGT+GGG + chr7_2:8834272-8834291 None:intergenic 20.0%
!! TTCAATATTTACTTTGTATG+TGG + chr7_2:8834273-8834292 None:intergenic 20.0%
!! TCATACATATCTAAATTCAT+GGG - chr7_2:8835233-8835252 Msa1047760:CDS 20.0%
!! AGAACAATGAAAATAAAATC+AGG + chr7_2:8835348-8835367 None:intergenic 20.0%
!!! GCAAATTGGTATAAATTTTA+TGG - chr7_2:8836208-8836227 Msa1047760:five_prime_UTR 20.0%
!! CACTTAAAAATTAATCATCA+AGG + chr7_2:8836234-8836253 None:intergenic 20.0%
! CAATGAAATCAATGAACAAA+AGG + chr7_2:8824102-8824121 None:intergenic 25.0%
!!! TTTTAAATGCATCTGATTTG+CGG - chr7_2:8824129-8824148 Msa1047760:three_prime_UTR 25.0%
!!! TGTATGATTAGGGTTTTTTT+AGG - chr7_2:8824333-8824352 Msa1047760:CDS 25.0%
!!! GTATGATTAGGGTTTTTTTA+GGG - chr7_2:8824334-8824353 Msa1047760:CDS 25.0%
!!! TTAGATTTTGGAATGGTTTT+TGG - chr7_2:8824388-8824407 Msa1047760:intron 25.0%
!! GTTTTTATGTTTGAATGTGT+AGG - chr7_2:8824478-8824497 Msa1047760:intron 25.0%
!! CTTTAAAAATATCGGTTGAT+AGG + chr7_2:8825450-8825469 None:intergenic 25.0%
!!! CTATCAACCGATATTTTTAA+AGG - chr7_2:8825448-8825467 Msa1047760:CDS 25.0%
!! AGCTAGTCCTTTAAAAATAT+CGG + chr7_2:8825458-8825477 None:intergenic 25.0%
! TTCAAAGACTTACAATGATA+AGG - chr7_2:8825534-8825553 Msa1047760:CDS 25.0%
! TCAAAGACTTACAATGATAA+GGG - chr7_2:8825535-8825554 Msa1047760:CDS 25.0%
! AGTTATTAAAAATGGTCAGA+TGG + chr7_2:8825912-8825931 None:intergenic 25.0%
!! CTTTTACTTGTATATGTTGT+TGG - chr7_2:8825930-8825949 Msa1047760:intron 25.0%
! AATTGAATGTAAACTTGTGT+CGG - chr7_2:8826054-8826073 Msa1047760:intron 25.0%
! GGTAGTAATACTCTATAATT+TGG - chr7_2:8826840-8826859 Msa1047760:intron 25.0%
!!! ATCTTTGAAGCTACTTTATT+AGG - chr7_2:8826887-8826906 Msa1047760:intron 25.0%
!!! ATTGTTATTTCCTTTTTGCA+TGG - chr7_2:8826976-8826995 Msa1047760:intron 25.0%
!!! TTGTTATTTCCTTTTTGCAT+GGG - chr7_2:8826977-8826996 Msa1047760:intron 25.0%
! TAAGAATAATAAAGGGACTT+GGG + chr7_2:8827093-8827112 None:intergenic 25.0%
! ATAAGAATAATAAAGGGACT+TGG + chr7_2:8827094-8827113 None:intergenic 25.0%
! TTTGGATTCATTCTATAACA+TGG - chr7_2:8827120-8827139 Msa1047760:intron 25.0%
!!! ACTATTTTGGTACAACTTTT+GGG + chr7_2:8827356-8827375 None:intergenic 25.0%
!!! AACTATTTTGGTACAACTTT+TGG + chr7_2:8827357-8827376 None:intergenic 25.0%
! TTTGTTTGTATTGAGAGAAA+AGG - chr7_2:8827423-8827442 Msa1047760:intron 25.0%
! TTGTTTGTATTGAGAGAAAA+GGG - chr7_2:8827424-8827443 Msa1047760:intron 25.0%
!!! TGCATTTTATTTCCTAAATG+CGG + chr7_2:8827526-8827545 None:intergenic 25.0%
!! AAAGGCATAAGAAAGTAATA+GGG + chr7_2:8827852-8827871 None:intergenic 25.0%
!! TAAAGGCATAAGAAAGTAAT+AGG + chr7_2:8827853-8827872 None:intergenic 25.0%
! TTATGTTTAATATTCTGCCA+AGG - chr7_2:8828022-8828041 Msa1047760:intron 25.0%
! ACAAATAACTGAAAAGACTA+AGG - chr7_2:8828169-8828188 Msa1047760:intron 25.0%
! CAAATAACTGAAAAGACTAA+GGG - chr7_2:8828170-8828189 Msa1047760:intron 25.0%
! CATAACATTTCTAACATCAA+TGG + chr7_2:8828228-8828247 None:intergenic 25.0%
!!! TATGAAAGTATTAAACCATG+TGG - chr7_2:8828244-8828263 Msa1047760:intron 25.0%
!! AGGAGTATAACATAAATAGT+TGG - chr7_2:8828425-8828444 Msa1047760:intron 25.0%
!!! AACGAATGTAATATTTTTGC+AGG + chr7_2:8828500-8828519 None:intergenic 25.0%
!! ACATTCTGTCATATTTCTAT+AGG - chr7_2:8828534-8828553 Msa1047760:intron 25.0%
! TCTCTAACATATTAATAGCA+GGG + chr7_2:8828743-8828762 None:intergenic 25.0%
!! ATATTTATGCTTTTACATGG+TGG - chr7_2:8828974-8828993 Msa1047760:intron 25.0%
! ATGAAATAAATGGAACTGTA+AGG + chr7_2:8829107-8829126 None:intergenic 25.0%
!! AATTATTTTCCGATATATGG+GGG + chr7_2:8829308-8829327 None:intergenic 25.0%
!! GGAAATTATTTTCCGATATA+TGG + chr7_2:8829311-8829330 None:intergenic 25.0%
! AAATTGACATAATGAAGAGA+AGG + chr7_2:8829886-8829905 None:intergenic 25.0%
! AAATGTTATACACATGTATC+TGG - chr7_2:8830108-8830127 Msa1047760:intron 25.0%
! TCTAATTGACGAAGTTTATA+TGG - chr7_2:8830259-8830278 Msa1047760:intron 25.0%
!!! ATCTTAGATTTGTTGCTATA+GGG - chr7_2:8830288-8830307 Msa1047760:intron 25.0%
! AGAAGATATAGAAGATTAGT+AGG - chr7_2:8830770-8830789 Msa1047760:intron 25.0%
! TTTGGATATTGTATACTCAT+TGG - chr7_2:8831027-8831046 Msa1047760:CDS 25.0%
! TTGGATATTGTATACTCATT+GGG - chr7_2:8831028-8831047 Msa1047760:CDS 25.0%
!!! GTTTGGTTTATTGATAATGT+TGG - chr7_2:8831758-8831777 Msa1047760:intron 25.0%
! GGCTATTGTGAAATTTAAAA+TGG - chr7_2:8831780-8831799 Msa1047760:intron 25.0%
!!! GCATTCTTATTGTTTTGAAA+TGG - chr7_2:8831878-8831897 Msa1047760:intron 25.0%
! GAAATTGTCTATTTCCTAAT+AGG + chr7_2:8831952-8831971 None:intergenic 25.0%
! ATTAGGAAATAGACAATTTC+TGG - chr7_2:8831952-8831971 Msa1047760:intron 25.0%
!! TATGATTGAACTTCGATTTT+TGG - chr7_2:8832140-8832159 Msa1047760:intron 25.0%
!! ATGATTGAACTTCGATTTTT+GGG - chr7_2:8832141-8832160 Msa1047760:intron 25.0%
! GAAATGATAGTCTATATGTT+TGG + chr7_2:8832248-8832267 None:intergenic 25.0%
! ATTGAGAAAAATATCCTATC+AGG - chr7_2:8832268-8832287 Msa1047760:intron 25.0%
! ATTATACTTATTGCACAAGA+AGG + chr7_2:8832350-8832369 None:intergenic 25.0%
! AATGAACCTAAACACTATAT+TGG + chr7_2:8832435-8832454 None:intergenic 25.0%
!! TTTTGGCAAAATCATTTAGT+TGG + chr7_2:8832570-8832589 None:intergenic 25.0%
! ACATAGAAAAAAGAAGTAGA+TGG - chr7_2:8832590-8832609 Msa1047760:intron 25.0%
! TGTATTAGAAAACAAGAAAG+CGG + chr7_2:8832698-8832717 None:intergenic 25.0%
! CTAATACATCCTTACTTTAA+TGG - chr7_2:8832710-8832729 Msa1047760:intron 25.0%
! AAGAACACACCAATATAAAA+GGG + chr7_2:8833105-8833124 None:intergenic 25.0%
!! AAGTTTTTATCAAAAGCAAG+AGG + chr7_2:8833239-8833258 None:intergenic 25.0%
! TAGAAAGGGTTTAGTATATA+TGG + chr7_2:8833289-8833308 None:intergenic 25.0%
! TATCAGATTACAGTTAGAAA+GGG + chr7_2:8833303-8833322 None:intergenic 25.0%
! TTATCAGATTACAGTTAGAA+AGG + chr7_2:8833304-8833323 None:intergenic 25.0%
!!! AAAAAAAGCATTGTAAGTAG+TGG - chr7_2:8833329-8833348 Msa1047760:CDS 25.0%
! TTATCAGTTACAATGAACAT+AGG + chr7_2:8834019-8834038 None:intergenic 25.0%
! TAAATGTGATGAAGAGAAAA+TGG + chr7_2:8834214-8834233 None:intergenic 25.0%
! TTATTTCCTTAATCAGCATT+AGG - chr7_2:8834355-8834374 Msa1047760:CDS 25.0%
!! CTTGTTGATTAGAAAACATA+CGG + chr7_2:8834609-8834628 None:intergenic 25.0%
! CTTACTAAGTATTTACTTCT+TGG + chr7_2:8835128-8835147 None:intergenic 25.0%
! CTCATACATATCTAAATTCA+TGG - chr7_2:8835232-8835251 Msa1047760:CDS 25.0%
!! TTATTTTCATTGTTCTTCAG+TGG - chr7_2:8835352-8835371 Msa1047760:CDS 25.0%
!!! ATATGGTTTTAGAAAATGGA+CGG + chr7_2:8835953-8835972 None:intergenic 25.0%
! CAGATTCACAATGTTTAATA+TGG + chr7_2:8835970-8835989 None:intergenic 25.0%
!! AATCTGTGATATTTTTCACA+TGG - chr7_2:8835984-8836003 Msa1047760:five_prime_UTR 25.0%
! GAGTTATAAATTGACAAGTT+TGG - chr7_2:8836066-8836085 Msa1047760:five_prime_UTR 25.0%
! GTAACAATATTTGAATGTCA+AGG - chr7_2:8836171-8836190 Msa1047760:five_prime_UTR 25.0%
!! ACAGGGTTGTTTTATATTGA+AGG - chr7_2:8824359-8824378 Msa1047760:intron 30.0%
!! CAGGGTTGTTTTATATTGAA+GGG - chr7_2:8824360-8824379 Msa1047760:intron 30.0%
! TTTTTGGATTCGTGAATTTG+AGG - chr7_2:8824404-8824423 Msa1047760:intron 30.0%
!! TGAATTTGAGGTTGTTTTGT+TGG - chr7_2:8824416-8824435 Msa1047760:intron 30.0%
! AATTCAGTGAATTGATTCAG+TGG - chr7_2:8824441-8824460 Msa1047760:intron 30.0%
GTGACTTTATCACAAAAATC+TGG + chr7_2:8825007-8825026 None:intergenic 30.0%
TTGAAACATCTAATCCAATC+AGG + chr7_2:8825285-8825304 None:intergenic 30.0%
GATGTTTCAAGAACTGATAT+CGG - chr7_2:8825295-8825314 Msa1047760:intron 30.0%
! TTTTCCGACAATACAAATAG+AGG - chr7_2:8825484-8825503 Msa1047760:CDS 30.0%
CTTTCCTCTATTTGTATTGT+CGG + chr7_2:8825491-8825510 None:intergenic 30.0%
! TAGTGGATCTTATATTCAAG+TGG - chr7_2:8826563-8826582 Msa1047760:intron 30.0%
TTGAACATATGAAGCAAGAA+AGG + chr7_2:8826652-8826671 None:intergenic 30.0%
TTAGCTTCTATTCCTTAACT+TGG - chr7_2:8827045-8827064 Msa1047760:intron 30.0%
AAGATAGAAAATAACTCCAC+CGG + chr7_2:8827156-8827175 None:intergenic 30.0%
GAGAGAAAGTTGTACAAAAA+TGG + chr7_2:8827263-8827282 None:intergenic 30.0%
TTCTCATTGGTCAAAAACAA+TGG + chr7_2:8827314-8827333 None:intergenic 30.0%
TAAGGTAGATCACACAAATA+AGG + chr7_2:8827553-8827572 None:intergenic 30.0%
CCAAGAAATCATAATGCATA+GGG + chr7_2:8827602-8827621 None:intergenic 30.0%
ACCAAGAAATCATAATGCAT+AGG + chr7_2:8827603-8827622 None:intergenic 30.0%
AATTAGATGGATACGAGAAA+AGG - chr7_2:8827886-8827905 Msa1047760:intron 30.0%
ATTAGATGGATACGAGAAAA+GGG - chr7_2:8827887-8827906 Msa1047760:intron 30.0%
!! CAAATTATTAGGAGCATCAT+TGG + chr7_2:8827945-8827964 None:intergenic 30.0%
! ATTTCTAACATCAATGGACT+TGG + chr7_2:8828222-8828241 None:intergenic 30.0%
TTATAAGAATGAGAGTGACA+AGG + chr7_2:8828317-8828336 None:intergenic 30.0%
GTGTGTTGTGAAATGTTAAT+AGG - chr7_2:8828405-8828424 Msa1047760:intron 30.0%
AAAAAGAAGTTAGCTAAGCA+AGG + chr7_2:8828659-8828678 None:intergenic 30.0%
GTCTCTAACATATTAATAGC+AGG + chr7_2:8828744-8828763 None:intergenic 30.0%
! TTTTACATGGTGGTTTATGT+AGG - chr7_2:8828984-8829003 Msa1047760:intron 30.0%
TCTTAGAACTCTTTCATGTA+TGG - chr7_2:8829170-8829189 Msa1047760:intron 30.0%
! AATCATATTTTCCCATTGAC+TGG + chr7_2:8829216-8829235 None:intergenic 30.0%
GTCAATGGGAAAATATGATT+AGG - chr7_2:8829216-8829235 Msa1047760:intron 30.0%
GAGCAATTCCCAATAAATAT+AGG + chr7_2:8829256-8829275 None:intergenic 30.0%
TTTATTGGGAATTGCTCTAT+TGG - chr7_2:8829259-8829278 Msa1047760:intron 30.0%
! ATTATTTTCCGATATATGGG+GGG + chr7_2:8829307-8829326 None:intergenic 30.0%
TATCGGAAAATAATTTCCGA+TGG - chr7_2:8829313-8829332 Msa1047760:intron 30.0%
AAAAATTGTCACTGGAACAA+GGG + chr7_2:8829387-8829406 None:intergenic 30.0%
TAAAAATTGTCACTGGAACA+AGG + chr7_2:8829388-8829407 None:intergenic 30.0%
TCAGTTGTAAAAATTGTCAC+TGG + chr7_2:8829395-8829414 None:intergenic 30.0%
AAAGTGCATTAAAGGTTTGA+TGG + chr7_2:8829471-8829490 None:intergenic 30.0%
!! TCAAGTTGATGAAAAGCTAA+TGG + chr7_2:8830212-8830231 None:intergenic 30.0%
!! CATCTTAGATTTGTTGCTAT+AGG - chr7_2:8830287-8830306 Msa1047760:intron 30.0%
!! TCTTAGATTTGTTGCTATAG+GGG - chr7_2:8830289-8830308 Msa1047760:intron 30.0%
! AGCAATGTTGTTTAGTAGTT+TGG - chr7_2:8830435-8830454 Msa1047760:intron 30.0%
AACAAAGTAAATGCCAACTA+TGG + chr7_2:8830508-8830527 None:intergenic 30.0%
! CAAGATCTTTTGTCTGAAAA+TGG + chr7_2:8830606-8830625 None:intergenic 30.0%
! CATTTTCAGACAAAAGATCT+TGG - chr7_2:8830604-8830623 Msa1047760:intron 30.0%
TAACAGTGAAGGAGATATAT+GGG + chr7_2:8830823-8830842 None:intergenic 30.0%
! ACTAGCCTAATAAAGAACAT+TGG - chr7_2:8830864-8830883 Msa1047760:intron 30.0%
CTAGCCTAATAAAGAACATT+GGG - chr7_2:8830865-8830884 Msa1047760:intron 30.0%
ACAACCCAATGTTCTTTATT+AGG + chr7_2:8830872-8830891 None:intergenic 30.0%
GAGTATACAATATCCAAAAC+TGG + chr7_2:8831025-8831044 None:intergenic 30.0%
TGGATATTGTATACTCATTG+GGG - chr7_2:8831029-8831048 Msa1047760:CDS 30.0%
! TTACTTTGGGAACTTAGATT+TGG - chr7_2:8831141-8831160 Msa1047760:intron 30.0%
TACAGATATGTTAAGGCATA+TGG + chr7_2:8831517-8831536 None:intergenic 30.0%
! ACTGGTTTACAGATATGTTA+AGG + chr7_2:8831524-8831543 None:intergenic 30.0%
!! TTCTGATAGATTTTAGGTAC+TGG + chr7_2:8831542-8831561 None:intergenic 30.0%
AATAAAAAAACACCGCATGA+AGG - chr7_2:8831577-8831596 Msa1047760:intron 30.0%
TTCAGTGATTCAATCAAGTT+TGG - chr7_2:8831628-8831647 Msa1047760:intron 30.0%
!!! ACTTTATGCAGTTGCTTTTA+TGG - chr7_2:8831715-8831734 Msa1047760:intron 30.0%
!!! CTTTATGCAGTTGCTTTTAT+GGG - chr7_2:8831716-8831735 Msa1047760:intron 30.0%
AATTAAACTAGCAACCAATG+AGG - chr7_2:8831907-8831926 Msa1047760:intron 30.0%
! CTTTGTATTTTCTTCCTCAT+TGG + chr7_2:8831924-8831943 None:intergenic 30.0%
CAATGAGGAAGAAAATACAA+AGG - chr7_2:8831922-8831941 Msa1047760:intron 30.0%
AATACAAAGGCTAACCTATT+AGG - chr7_2:8831935-8831954 Msa1047760:intron 30.0%
AAAAATATCCTATCAGGTAG+AGG - chr7_2:8832274-8832293 Msa1047760:intron 30.0%
!! TCTGCTAGTTGATAATTGAT+AGG + chr7_2:8832302-8832321 None:intergenic 30.0%
CTCTATTGTGAATTTACTCA+TGG - chr7_2:8832501-8832520 Msa1047760:intron 30.0%
GCAAAATCATTTAGTTGGAT+TGG + chr7_2:8832565-8832584 None:intergenic 30.0%
GTATTAGAAAACAAGAAAGC+GGG + chr7_2:8832697-8832716 None:intergenic 30.0%
AAAATAAATTACCTCCGCTT+CGG + chr7_2:8832925-8832944 None:intergenic 30.0%
ACTAATCAATGCACAGAAAT+GGG + chr7_2:8833017-8833036 None:intergenic 30.0%
AACTAATCAATGCACAGAAA+TGG + chr7_2:8833018-8833037 None:intergenic 30.0%
GAAGAACACACCAATATAAA+AGG + chr7_2:8833106-8833125 None:intergenic 30.0%
CACAAAACCAAAAGAGAAAA+AGG + chr7_2:8833132-8833151 None:intergenic 30.0%
TTTGATCATGTTATCACTCA+CGG + chr7_2:8833495-8833514 None:intergenic 30.0%
! AATATCACACTTGATGACAT+TGG - chr7_2:8833517-8833536 Msa1047760:CDS 30.0%
ATTATGCTAAAGCATGTCTT+GGG - chr7_2:8833562-8833581 Msa1047760:CDS 30.0%
TACACAGAATTATACATTGG+AGG + chr7_2:8833622-8833641 None:intergenic 30.0%
GGATACACAGAATTATACAT+TGG + chr7_2:8833625-8833644 None:intergenic 30.0%
!!! TTTTTTGAGAGGAAGTCTTA+TGG - chr7_2:8834085-8834104 Msa1047760:intron 30.0%
AACTAGAAAGAATGCATTTC+TGG + chr7_2:8834186-8834205 None:intergenic 30.0%
CTCTTCATCACATTTAGAAA+TGG - chr7_2:8834218-8834237 Msa1047760:intron 30.0%
CTGGAATAAACATTTGGTTA+TGG + chr7_2:8834247-8834266 None:intergenic 30.0%
! TTGATTCCTAATGCTGATTA+AGG + chr7_2:8834364-8834383 None:intergenic 30.0%
GTTGTGATACTCAGTTTAAT+CGG + chr7_2:8834470-8834489 None:intergenic 30.0%
! ATGGATGAATTTGCTTTAGT+CGG - chr7_2:8834502-8834521 Msa1047760:CDS 30.0%
! ATAATAAGAGCTACTTTGAG+TGG + chr7_2:8834746-8834765 None:intergenic 30.0%
ACAAAGCTACATAGTTAGAA+AGG + chr7_2:8834775-8834794 None:intergenic 30.0%
AAAATTTCAGCTGGTGTAAA+TGG + chr7_2:8834939-8834958 None:intergenic 30.0%
AGAATAGCAAAAATTTCAGC+TGG + chr7_2:8834948-8834967 None:intergenic 30.0%
!!! GCTGAAATTTTTGCTATTCT+TGG - chr7_2:8834948-8834967 Msa1047760:CDS 30.0%
! GTCTAAGTTTTCATTAAGTG+CGG + chr7_2:8835106-8835125 None:intergenic 30.0%
CGAAATAAAAAAATGATGCG+AGG + chr7_2:8835314-8835333 None:intergenic 30.0%
!! TATGCTAGGGCTTTAAATAA+AGG - chr7_2:8835487-8835506 Msa1047760:CDS 30.0%
! CATTGTGATTTTTGATGTTG+TGG + chr7_2:8835615-8835634 None:intergenic 30.0%
AGCTGGAGTTTCATTCATAT+AGG - chr7_2:8823834-8823853 Msa1047760:three_prime_UTR 35.0%
GAGAGAGAATTACAGCATTA+GGG + chr7_2:8823898-8823917 None:intergenic 35.0%
AGAGAGAGAATTACAGCATT+AGG + chr7_2:8823899-8823918 None:intergenic 35.0%
TTCGAATGAAGAAGTGAAAG+GGG + chr7_2:8823995-8824014 None:intergenic 35.0%
CTTCGAATGAAGAAGTGAAA+GGG + chr7_2:8823996-8824015 None:intergenic 35.0%
AAATCGAAGCTGGTTGAAAA+GGG + chr7_2:8824072-8824091 None:intergenic 35.0%
AAAATCGAAGCTGGTTGAAA+AGG + chr7_2:8824073-8824092 None:intergenic 35.0%
!!! TGAAGGGCTTTGTTAGATTT+TGG - chr7_2:8824376-8824395 Msa1047760:intron 35.0%
!!! GGCTTTGTTAGATTTTGGAA+TGG - chr7_2:8824381-8824400 Msa1047760:intron 35.0%
!! GAATGTGTAGGTGTTGAATT+TGG - chr7_2:8824490-8824509 Msa1047760:intron 35.0%
AAGAAAAGGCAAAGGAAATG+CGG - chr7_2:8824559-8824578 Msa1047760:intron 35.0%
AGCTGAATTACTGTATCATC+AGG + chr7_2:8824659-8824678 None:intergenic 35.0%
TATCAGCAACTTGTAAGACA+TGG - chr7_2:8824714-8824733 Msa1047760:intron 35.0%
ACATCTAATCCAATCAGGTT+AGG + chr7_2:8825280-8825299 None:intergenic 35.0%
AACAATCTTGAAACAGCAGA+CGG + chr7_2:8825322-8825341 None:intergenic 35.0%
GCAATCAAAACTCTCAAACT+TGG + chr7_2:8825355-8825374 None:intergenic 35.0%
! AAAAGCTAGTCTCTTCTTCA+AGG + chr7_2:8825393-8825412 None:intergenic 35.0%
! TAGAGGAAAGAACGTGTTTT+TGG - chr7_2:8825501-8825520 Msa1047760:CDS 35.0%
! AAATCATACCTTGGCTTGAA+TGG - chr7_2:8825566-8825585 Msa1047760:CDS 35.0%
! AGCAGAACGCAAAAGTATAT+GGG + chr7_2:8825599-8825618 None:intergenic 35.0%
! AAGGAGGTCTTGATAATTTC+TGG - chr7_2:8825632-8825651 Msa1047760:intron 35.0%
! AGGAGGTCTTGATAATTTCT+GGG - chr7_2:8825633-8825652 Msa1047760:intron 35.0%
! GATAATTTCTGGGTTGAACA+AGG - chr7_2:8825643-8825662 Msa1047760:intron 35.0%
! TGTAAGATTTTGCAAGTCCA+AGG + chr7_2:8825828-8825847 None:intergenic 35.0%
TTGGACTTGCAAAATCTTAC+AGG - chr7_2:8825827-8825846 Msa1047760:intron 35.0%
TGGACTTGCAAAATCTTACA+GGG - chr7_2:8825828-8825847 Msa1047760:intron 35.0%
TTGCAAAATCTTACAGGGAA+GGG - chr7_2:8825833-8825852 Msa1047760:intron 35.0%
TCTTTCCATTTGTATCTGTC+TGG - chr7_2:8825885-8825904 Msa1047760:intron 35.0%
ACAATAGGTATGCATGCAAA+AGG + chr7_2:8826149-8826168 None:intergenic 35.0%
TCTGAACCTTCTCAATTTAC+AGG - chr7_2:8826263-8826282 Msa1047760:CDS 35.0%
CAATAGCCTGTAAATTGAGA+AGG + chr7_2:8826272-8826291 None:intergenic 35.0%
! GTTTGAAGTAAAAGCTGAAG+CGG - chr7_2:8826494-8826513 Msa1047760:intron 35.0%
AATGTCTGCCAATTGAAGAT+TGG - chr7_2:8826915-8826934 Msa1047760:intron 35.0%
TACGAGTTCCAATCTTCAAT+TGG + chr7_2:8826926-8826945 None:intergenic 35.0%
AAAAAGACTCCCATGCAAAA+AGG + chr7_2:8826989-8827008 None:intergenic 35.0%
TGGGACAGATATTGTAGAAA+TGG - chr7_2:8827010-8827029 Msa1047760:intron 35.0%
CCTTTACAACTTCCAAGTTA+AGG + chr7_2:8827060-8827079 None:intergenic 35.0%
! CCTTAACTTGGAAGTTGTAA+AGG - chr7_2:8827057-8827076 Msa1047760:intron 35.0%
ATAACATGGCTATCCAATTC+CGG - chr7_2:8827134-8827153 Msa1047760:intron 35.0%
AATGTGCGAAGTTCAATGAT+AGG + chr7_2:8827186-8827205 None:intergenic 35.0%
! CGCACATTTTACATTTGTGA+AGG - chr7_2:8827198-8827217 Msa1047760:CDS 35.0%
! TTGTTGTTCTCTCTTCTCAT+TGG + chr7_2:8827327-8827346 None:intergenic 35.0%
AATGAGAAGAGAGAACAACA+AGG - chr7_2:8827326-8827345 Msa1047760:intron 35.0%
GAAATCATAATGCATAGGGA+AGG + chr7_2:8827598-8827617 None:intergenic 35.0%
CCCTATGCATTATGATTTCT+TGG - chr7_2:8827599-8827618 Msa1047760:intron 35.0%
CTAGTGTTTAAGAGGAACAA+TGG + chr7_2:8827660-8827679 None:intergenic 35.0%
CATTGTTCCTCTTAAACACT+AGG - chr7_2:8827658-8827677 Msa1047760:intron 35.0%
! TGTTGTCACTTGTTAGATAG+TGG - chr7_2:8828064-8828083 Msa1047760:intron 35.0%
GTGTTGTCAATTGTGAATCA+TGG + chr7_2:8828134-8828153 None:intergenic 35.0%
TGATTCACAATTGACAACAC+TGG - chr7_2:8828134-8828153 Msa1047760:intron 35.0%
TATTGTTAGGTGAAACCACA+TGG + chr7_2:8828262-8828281 None:intergenic 35.0%
TTGAAGTGGGGTTAATTCAA+AGG + chr7_2:8828361-8828380 None:intergenic 35.0%
!! TGACAAAGAGAAGCACTAAA+AGG + chr7_2:8828465-8828484 None:intergenic 35.0%
ATTTGACGATAGAAATCGAG+AGG - chr7_2:8828589-8828608 Msa1047760:intron 35.0%
! GACGGTTTTCATATACTAGA+GGG + chr7_2:8828712-8828731 None:intergenic 35.0%
! AGACGGTTTTCATATACTAG+AGG + chr7_2:8828713-8828732 None:intergenic 35.0%
CATATTAATAGCAGGGACTA+AGG + chr7_2:8828736-8828755 None:intergenic 35.0%
TAGAACTCTTTCATGTATGG+TGG - chr7_2:8829173-8829192 Msa1047760:intron 35.0%
!! TTTCATGTATGGTGGACTAT+TGG - chr7_2:8829181-8829200 Msa1047760:intron 35.0%
!! ATATTTTCCCATTGACTGGT+TGG + chr7_2:8829212-8829231 None:intergenic 35.0%
! TTATTTTCCGATATATGGGG+GGG + chr7_2:8829306-8829325 None:intergenic 35.0%
AAAATTGTCACTGGAACAAG+GGG + chr7_2:8829386-8829405 None:intergenic 35.0%
! TTTCTGATTCGCAAACACAT+TGG + chr7_2:8829572-8829591 None:intergenic 35.0%
AATGTGTTTGCGAATCAGAA+AGG - chr7_2:8829571-8829590 Msa1047760:intron 35.0%
ATGTGTTTGCGAATCAGAAA+GGG - chr7_2:8829572-8829591 Msa1047760:intron 35.0%
!! ACAATGATGGACTTGTAAGT+TGG + chr7_2:8829722-8829741 None:intergenic 35.0%
ACTTACAAGTCCATCATTGT+CGG - chr7_2:8829722-8829741 Msa1047760:intron 35.0%
AAGATCTAGTGTAGGTGTTA+GGG + chr7_2:8829824-8829843 None:intergenic 35.0%
! ATACCTTTTCTGAGTGCAAT+AGG + chr7_2:8829847-8829866 None:intergenic 35.0%
! TTGCACTCAGAAAAGGTATA+AGG - chr7_2:8829848-8829867 Msa1047760:intron 35.0%
TGTGTCTATTCCTAAATTGC+AGG - chr7_2:8829960-8829979 Msa1047760:intron 35.0%
! GTGAAGCTCTTTTTGATCTT+GGG - chr7_2:8829982-8830001 Msa1047760:intron 35.0%
AAATGTGTGCTTTACAACAG+TGG - chr7_2:8830027-8830046 Msa1047760:intron 35.0%
AATGTGTGCTTTACAACAGT+GGG - chr7_2:8830028-8830047 Msa1047760:intron 35.0%
AATTAAAGATGGTCCTGACA+AGG - chr7_2:8830076-8830095 Msa1047760:intron 35.0%
TTATACACATGTATCTGGCT+TGG - chr7_2:8830113-8830132 Msa1047760:intron 35.0%
TTAAGAATGCTTTCCTCCAT+TGG - chr7_2:8830234-8830253 Msa1047760:intron 35.0%
TAAGAATGCTTTCCTCCATT+GGG - chr7_2:8830235-8830254 Msa1047760:intron 35.0%
AATCTTCTAAATCATGCTCG+AGG + chr7_2:8830371-8830390 None:intergenic 35.0%
AATCTTCTAAATCATGCTCG+AGG + chr7_2:8830371-8830390 None:intergenic 35.0%
TGGTGTGATTAAAAGTGAGT+TGG - chr7_2:8830455-8830474 Msa1047760:intron 35.0%
AACTATGGTTGAATGGCAAT+AGG + chr7_2:8830493-8830512 None:intergenic 35.0%
TATTGCCATTCAACCATAGT+TGG - chr7_2:8830492-8830511 Msa1047760:intron 35.0%
AAATGCCAACTATGGTTGAA+TGG + chr7_2:8830500-8830519 None:intergenic 35.0%
GTTGTCGATGTTGTCATTAT+AGG - chr7_2:8830534-8830553 Msa1047760:intron 35.0%
TGGCAGACTATAGTATTTGT+TGG - chr7_2:8830624-8830643 Msa1047760:intron 35.0%
GGCAGACTATAGTATTTGTT+GGG - chr7_2:8830625-8830644 Msa1047760:intron 35.0%
! GCAGACTATAGTATTTGTTG+GGG - chr7_2:8830626-8830645 Msa1047760:intron 35.0%
! CAGACTATAGTATTTGTTGG+GGG - chr7_2:8830627-8830646 Msa1047760:intron 35.0%
TTATGTCGTTGACATTCTAG+AGG - chr7_2:8830695-8830714 Msa1047760:intron 35.0%
! TATATGGGTGAATGATAGTG+AGG + chr7_2:8830808-8830827 None:intergenic 35.0%
CTAACAGTGAAGGAGATATA+TGG + chr7_2:8830824-8830843 None:intergenic 35.0%
!!! TCACATTTTGAAGTGCATGA+AGG - chr7_2:8830898-8830917 Msa1047760:intron 35.0%
GGTTTCATTTATGAGAACCA+TGG - chr7_2:8830935-8830954 Msa1047760:intron 35.0%
ATAGGGATACTCATGTTGAT+TGG - chr7_2:8830976-8830995 Msa1047760:intron 35.0%
GGATATTGTATACTCATTGG+GGG - chr7_2:8831030-8831049 Msa1047760:CDS 35.0%
GATATTGTATACTCATTGGG+GGG - chr7_2:8831031-8831050 Msa1047760:CDS 35.0%
! ATGACTCAAGCAGTTACTTT+GGG - chr7_2:8831128-8831147 Msa1047760:intron 35.0%
! CAAAATGCTTAGTTCTCTCA+TGG + chr7_2:8831236-8831255 None:intergenic 35.0%
GTTCTCGATAAACTATAGCT+TGG - chr7_2:8831347-8831366 Msa1047760:intron 35.0%
! CAATGAAGTCTGTTTTGTGT+AGG + chr7_2:8831471-8831490 None:intergenic 35.0%
CATTGTGTAGTTCAAACACT+CGG - chr7_2:8831486-8831505 Msa1047760:intron 35.0%
ATTGTGTAGTTCAAACACTC+GGG - chr7_2:8831487-8831506 Msa1047760:intron 35.0%
ACTAACCAAAATCCTTCATG+CGG + chr7_2:8831592-8831611 None:intergenic 35.0%
TGACAACTTAAATGTAGCAG+TGG - chr7_2:8831684-8831703 Msa1047760:intron 35.0%
! GGAAATAGACAATTTCTGGA+TGG - chr7_2:8831956-8831975 Msa1047760:intron 35.0%
AACTCTCGACTAAAGGTTAT+AGG - chr7_2:8831995-8832014 Msa1047760:intron 35.0%
TCTATATGCTCCAAACTTGA+AGG - chr7_2:8832378-8832397 Msa1047760:CDS 35.0%
CTATTTATGATGCTGTCAAG+AGG + chr7_2:8832539-8832558 None:intergenic 35.0%
TGAGAAGTAAAGACCAGAAA+AGG + chr7_2:8832616-8832635 None:intergenic 35.0%
! AGCTGTATGCCCTTTTATAT+TGG - chr7_2:8833093-8833112 Msa1047760:intron 35.0%
! CTTCAAGCCTTTTTCTCTTT+TGG - chr7_2:8833122-8833141 Msa1047760:intron 35.0%
TAAAATTTCTGCTAGCCACT+AGG - chr7_2:8833197-8833216 Msa1047760:intron 35.0%
AAGTGGATAATGTTGTCGAA+TGG - chr7_2:8833403-8833422 Msa1047760:intron 35.0%
CAAGACATGCTTTAGCATAA+TGG + chr7_2:8833563-8833582 None:intergenic 35.0%
CATTATGCTAAAGCATGTCT+TGG - chr7_2:8833561-8833580 Msa1047760:CDS 35.0%
TTATGCTAAAGCATGTCTTG+GGG - chr7_2:8833563-8833582 Msa1047760:CDS 35.0%
! GCTTGTTAGACAAGAAATAC+AGG + chr7_2:8833676-8833695 None:intergenic 35.0%
! ACTATTCGTAAAGCATTACC+AGG + chr7_2:8833843-8833862 None:intergenic 35.0%
! TGGTAATGCTTTACGAATAG+TGG - chr7_2:8833842-8833861 Msa1047760:intron 35.0%
TAATGCTTTACGAATAGTGG+AGG - chr7_2:8833845-8833864 Msa1047760:intron 35.0%
CTCTTCATCAGTGTCAAAAA+TGG - chr7_2:8833899-8833918 Msa1047760:intron 35.0%
GTCAAAAATGGCACGATTTA+TGG - chr7_2:8833911-8833930 Msa1047760:intron 35.0%
AACCTGCTTGTAACAAACTT+AGG - chr7_2:8833985-8834004 Msa1047760:intron 35.0%
ACCTGCTTGTAACAAACTTA+GGG - chr7_2:8833986-8834005 Msa1047760:intron 35.0%
TTTAGAAACACTCTCTGACA+TGG + chr7_2:8834530-8834549 None:intergenic 35.0%
!! AGAGAGTGTTTCTAAAAGTG+TGG - chr7_2:8834534-8834553 Msa1047760:CDS 35.0%
!! GAGAGTGTTTCTAAAAGTGT+GGG - chr7_2:8834535-8834554 Msa1047760:CDS 35.0%
! GTTTTCATTAAGTGCGGATT+CGG + chr7_2:8835100-8835119 None:intergenic 35.0%
!! CAGAATGCATCATTTTTCAG+TGG - chr7_2:8835190-8835209 Msa1047760:CDS 35.0%
!! AAAATGATGCGAGGTTGATA+GGG + chr7_2:8835305-8835324 None:intergenic 35.0%
! AAAAATGATGCGAGGTTGAT+AGG + chr7_2:8835306-8835325 None:intergenic 35.0%
!! CTTGGTTTTCATCTATGCTA+GGG - chr7_2:8835474-8835493 Msa1047760:CDS 35.0%
!! TTTGATGTTGTGGAGTATTG+AGG + chr7_2:8835605-8835624 None:intergenic 35.0%
!!! AGGGTTTTAAATAACGAGTG+CGG + chr7_2:8835641-8835660 None:intergenic 35.0%
CTATCACAGTTTACAATTCC+CGG - chr7_2:8835741-8835760 Msa1047760:intron 35.0%
CTAAACTAGACTAGGCAAAT+TGG - chr7_2:8836194-8836213 Msa1047760:five_prime_UTR 35.0%
!! TGAGGAAGATGGTTGATGAA+GGG + chr7_2:8823956-8823975 None:intergenic 40.0%
!! ATGAGGAAGATGGTTGATGA+AGG + chr7_2:8823957-8823976 None:intergenic 40.0%
TGAAGAAGTGAAAGGGGTAA+GGG + chr7_2:8823989-8824008 None:intergenic 40.0%
ATGAAGAAGTGAAAGGGGTA+AGG + chr7_2:8823990-8824009 None:intergenic 40.0%
GCTTCGAATGAAGAAGTGAA+AGG + chr7_2:8823997-8824016 None:intergenic 40.0%
GAAAGGGTCAAGGTTATGAA+TGG + chr7_2:8824024-8824043 None:intergenic 40.0%
TCATAACCTTGACCCTTTCT+AGG - chr7_2:8824025-8824044 Msa1047760:three_prime_UTR 40.0%
CATAACCTTGACCCTTTCTA+GGG - chr7_2:8824026-8824045 Msa1047760:three_prime_UTR 40.0%
TTGAACCTAGACCCTAGAAA+GGG + chr7_2:8824040-8824059 None:intergenic 40.0%
ATTGAACCTAGACCCTAGAA+AGG + chr7_2:8824041-8824060 None:intergenic 40.0%
AACCATATAGCTTGAGCTCA+AGG - chr7_2:8824156-8824175 Msa1047760:three_prime_UTR 40.0%
AACCTTGAGCTCAAGCTATA+TGG + chr7_2:8824161-8824180 None:intergenic 40.0%
!!! TAGGGTTTTTTTAGGGTGAC+AGG - chr7_2:8824341-8824360 Msa1047760:CDS 40.0%
!!! AGGGTTTTTTTAGGGTGACA+GGG - chr7_2:8824342-8824361 Msa1047760:CDS 40.0%
AAAGTGGCAAGAAAAGGCAA+AGG - chr7_2:8824551-8824570 Msa1047760:intron 40.0%
AGCAACTTGTAAGACATGGA+GGG - chr7_2:8824718-8824737 Msa1047760:intron 40.0%
TCCAAAGAACTCCACAAACA+CGG + chr7_2:8824758-8824777 None:intergenic 40.0%
AAGAACTTGCGCGAAATAAG+CGG - chr7_2:8824899-8824918 Msa1047760:intron 40.0%
! TTACTTGAGAGTCTTGTGCT+TGG - chr7_2:8824980-8824999 Msa1047760:intron 40.0%
GTCCAAGTTTGATGAAACTC+AGG - chr7_2:8825059-8825078 Msa1047760:intron 40.0%
AGCCTGAGTTTCATCAAACT+TGG + chr7_2:8825064-8825083 None:intergenic 40.0%
TTTGATGAAACTCAGGCTCT+CGG - chr7_2:8825066-8825085 Msa1047760:intron 40.0%
AGCCAATGCGTTAATAGCAT+CGG + chr7_2:8825110-8825129 None:intergenic 40.0%
TGTCCAAAGTTGACCGATAT+CGG - chr7_2:8825136-8825155 Msa1047760:intron 40.0%
TGCATTGGGAAATGTGCAAT+CGG - chr7_2:8825189-8825208 Msa1047760:intron 40.0%
CTTAAGCTTCCTAACCTGAT+TGG - chr7_2:8825268-8825287 Msa1047760:intron 40.0%
!! AACTCTCAAACTTGGTGATG+AGG + chr7_2:8825347-8825366 None:intergenic 40.0%
CTAGTCTCTTCTTCAAGGAT+AGG + chr7_2:8825388-8825407 None:intergenic 40.0%
!!! GAAAGAACGTGTTTTTGGAC+TGG - chr7_2:8825506-8825525 Msa1047760:CDS 40.0%
GCCTTGATGAAATCATACCT+TGG - chr7_2:8825557-8825576 Msa1047760:CDS 40.0%
GCCAAGGTATGATTTCATCA+AGG + chr7_2:8825561-8825580 None:intergenic 40.0%
! CAGCAGAACGCAAAAGTATA+TGG + chr7_2:8825600-8825619 None:intergenic 40.0%
TATCAAGACCTCCTTGTTGA+GGG + chr7_2:8825627-8825646 None:intergenic 40.0%
TTATCAAGACCTCCTTGTTG+AGG + chr7_2:8825628-8825647 None:intergenic 40.0%
CTGCATAAGACTAAGCAAGA+GGG + chr7_2:8825674-8825693 None:intergenic 40.0%
TCTGCATAAGACTAAGCAAG+AGG + chr7_2:8825675-8825694 None:intergenic 40.0%
TCTTATGCAGAGTTCTCAAG+AGG - chr7_2:8825684-8825703 Msa1047760:intron 40.0%
AACAAAAGTTGCAAGACCTG+TGG + chr7_2:8825728-8825747 None:intergenic 40.0%
!! GAAAATGCTAGCATCGATTG+TGG - chr7_2:8825760-8825779 Msa1047760:intron 40.0%
! AAGATTTTGCAAGTCCAAGG+AGG + chr7_2:8825825-8825844 None:intergenic 40.0%
CTTGCAAAATCTTACAGGGA+AGG - chr7_2:8825832-8825851 Msa1047760:intron 40.0%
ATGGACCAGACAGATACAAA+TGG + chr7_2:8825893-8825912 None:intergenic 40.0%
! ACACCTCCAATTTGAAGTGT+CGG - chr7_2:8826097-8826116 Msa1047760:intron 40.0%
GTGCACATAAACTGCACAAT+AGG + chr7_2:8826164-8826183 None:intergenic 40.0%
ACACAGATATTCGTCAGTCA+AGG + chr7_2:8826235-8826254 None:intergenic 40.0%
GATTGAGATCCTTGCTAGTT+TGG - chr7_2:8826344-8826363 Msa1047760:intron 40.0%
TAGGTCAATGAACAAACTGG+TGG - chr7_2:8826368-8826387 Msa1047760:intron 40.0%
GGATTATGGAATCTCTCTGT+TGG - chr7_2:8826408-8826427 Msa1047760:intron 40.0%
ATATTCAAGTGGTCCTCTAC+TGG - chr7_2:8826574-8826593 Msa1047760:intron 40.0%
! TTTGCATGGGAGTCTTTTTG+TGG - chr7_2:8826990-8827009 Msa1047760:intron 40.0%
! TTGCATGGGAGTCTTTTTGT+GGG - chr7_2:8826991-8827010 Msa1047760:intron 40.0%
GAAAATAACTCCACCGGAAT+TGG + chr7_2:8827150-8827169 None:intergenic 40.0%
TGGAAATGTGGTCAACATTG+TGG - chr7_2:8827477-8827496 Msa1047760:intron 40.0%
GAGATGATCAATGACCAGAA+TGG + chr7_2:8827504-8827523 None:intergenic 40.0%
CATTGATCATCTCCGCATTT+AGG - chr7_2:8827511-8827530 Msa1047760:intron 40.0%
TGTGATCTACCTTAGCTAAG+AGG - chr7_2:8827559-8827578 Msa1047760:intron 40.0%
!! ATAGAAGCACCTCTTAGCTA+AGG + chr7_2:8827571-8827590 None:intergenic 40.0%
AACAGTAACAATGCTGCTGT+TGG - chr7_2:8827722-8827741 Msa1047760:intron 40.0%
ATACGAGAAAAGGGAGATAG+AGG - chr7_2:8827896-8827915 Msa1047760:intron 40.0%
CTAACAAGTGACAACACTTG+TGG + chr7_2:8828060-8828079 None:intergenic 40.0%
! CACTTGTTAGATAGTGGCTA+TGG - chr7_2:8828070-8828089 Msa1047760:intron 40.0%
!! AACGCTTTAGGATTGAAGTG+GGG + chr7_2:8828373-8828392 None:intergenic 40.0%
!! GAACGCTTTAGGATTGAAGT+GGG + chr7_2:8828374-8828393 None:intergenic 40.0%
!! AGAACGCTTTAGGATTGAAG+TGG + chr7_2:8828375-8828394 None:intergenic 40.0%
! TCCTAAAGCGTTCTTACATG+AGG - chr7_2:8828381-8828400 Msa1047760:intron 40.0%
! CCTAAAGCGTTCTTACATGA+GGG - chr7_2:8828382-8828401 Msa1047760:intron 40.0%
! CTAAAGCGTTCTTACATGAG+GGG - chr7_2:8828383-8828402 Msa1047760:intron 40.0%
! AGAGAGAGTGTGATGCTTTA+AGG - chr7_2:8828833-8828852 Msa1047760:intron 40.0%
ATTATGGGAATGGCTCGATT+GGG + chr7_2:8829441-8829460 None:intergenic 40.0%
AATTATGGGAATGGCTCGAT+TGG + chr7_2:8829442-8829461 None:intergenic 40.0%
!! TTTGATGGCGGCGTAATTAT+GGG + chr7_2:8829456-8829475 None:intergenic 40.0%
GTGCATTAAAGGTTTGATGG+CGG + chr7_2:8829468-8829487 None:intergenic 40.0%
! CGCACTTGAAAGTGCATTAA+AGG + chr7_2:8829479-8829498 None:intergenic 40.0%
AAAACTTTCCAAGCGTATGC+CGG - chr7_2:8829520-8829539 Msa1047760:intron 40.0%
!! TGATGGACTTGTAAGTTGGA+AGG + chr7_2:8829718-8829737 None:intergenic 40.0%
GAAGATCTAGTGTAGGTGTT+AGG + chr7_2:8829825-8829844 None:intergenic 40.0%
GCAATAGGAAGATCTAGTGT+AGG + chr7_2:8829832-8829851 None:intergenic 40.0%
CTTCCTATTGCACTCAGAAA+AGG - chr7_2:8829841-8829860 Msa1047760:intron 40.0%
GAAAGACAAGCAAAATGCGT+AGG + chr7_2:8829928-8829947 None:intergenic 40.0%
AGGAATAGACACAGAAGAGA+GGG + chr7_2:8829953-8829972 None:intergenic 40.0%
TAGGAATAGACACAGAAGAG+AGG + chr7_2:8829954-8829973 None:intergenic 40.0%
AAGAGCTTCACCTGCAATTT+AGG + chr7_2:8829973-8829992 None:intergenic 40.0%
! GGTGAAGCTCTTTTTGATCT+TGG - chr7_2:8829981-8830000 Msa1047760:intron 40.0%
! AAGCTCTTTTTGATCTTGGG+TGG - chr7_2:8829985-8830004 Msa1047760:intron 40.0%
! AGCTCTTTTTGATCTTGGGT+GGG - chr7_2:8829986-8830005 Msa1047760:intron 40.0%
!! ATTTAGCAACTAGCCTTGTC+AGG + chr7_2:8830092-8830111 None:intergenic 40.0%
!! CATGTATCTGGCTTGGATTA+TGG - chr7_2:8830120-8830139 Msa1047760:intron 40.0%
CTTCGTCAATTAGATCCCAA+TGG + chr7_2:8830253-8830272 None:intergenic 40.0%
ATGCTCGAGGAGATTGTTTA+AGG + chr7_2:8830358-8830377 None:intergenic 40.0%
TTATAGGCAGTGATCCATCA+TGG - chr7_2:8830550-8830569 Msa1047760:intron 40.0%
TAATCTGAGCAATGCCATGA+TGG + chr7_2:8830567-8830586 None:intergenic 40.0%
! TAGTATTTGTTGGGGGATAG+AGG - chr7_2:8830634-8830653 Msa1047760:intron 40.0%
TGATATTGTAAGACCGTCCT+TGG + chr7_2:8830669-8830688 None:intergenic 40.0%
ATTGGGATACATAGCAGTGT+CGG + chr7_2:8830748-8830767 None:intergenic 40.0%
TATCTCCTTCACTGTTAGTG+TGG - chr7_2:8830826-8830845 Msa1047760:intron 40.0%
ACTTACCACACTAACAGTGA+AGG + chr7_2:8830834-8830853 None:intergenic 40.0%
ATGAAGGAAGCTCAAAGCAA+AGG - chr7_2:8830914-8830933 Msa1047760:intron 40.0%
! CATGGTCATACTTGAGTTGT+GGG - chr7_2:8830953-8830972 Msa1047760:intron 40.0%
! TCATACTTGAGTTGTGGGAT+AGG - chr7_2:8830958-8830977 Msa1047760:intron 40.0%
! CATACTTGAGTTGTGGGATA+GGG - chr7_2:8830959-8830978 Msa1047760:intron 40.0%
ACCTCATCTCTTGGAAAAGT+AGG - chr7_2:8831056-8831075 Msa1047760:intron 40.0%
!! TCCTACTTTTCCAAGAGATG+AGG + chr7_2:8831060-8831079 None:intergenic 40.0%
CATGACTCAAGCAGTTACTT+TGG - chr7_2:8831127-8831146 Msa1047760:intron 40.0%
TTGGGAACTTAGATTTGGAG+AGG - chr7_2:8831146-8831165 Msa1047760:intron 40.0%
TTAGATTTGGAGAGGTTGCA+CGG - chr7_2:8831154-8831173 Msa1047760:intron 40.0%
CTCATGGAATACTGAATCTG+TGG + chr7_2:8831220-8831239 None:intergenic 40.0%
AGTTTATCGAGAACTCCTCA+AGG + chr7_2:8831341-8831360 None:intergenic 40.0%
ATTTATCTGCTCCAGCATGA+TGG - chr7_2:8831378-8831397 Msa1047760:intron 40.0%
! AAACACCGCATGAAGGATTT+TGG - chr7_2:8831584-8831603 Msa1047760:intron 40.0%
!!! ATGCAGTTGCTTTTATGGGA+AGG - chr7_2:8831720-8831739 Msa1047760:intron 40.0%
!!! TGCAGTTGCTTTTATGGGAA+GGG - chr7_2:8831721-8831740 Msa1047760:intron 40.0%
!! GGGATGGTGATTGTTTTGTT+TGG - chr7_2:8831741-8831760 Msa1047760:intron 40.0%
! AATTTCTGGATGGAGTTCGA+CGG - chr7_2:8831966-8831985 Msa1047760:intron 40.0%
!! ATTCAGCATTGACAGAGACT+AGG + chr7_2:8832094-8832113 None:intergenic 40.0%
GACATGCAAAGCTTCTTACT+TGG + chr7_2:8832193-8832212 None:intergenic 40.0%
ACCACTGAAACACTAGATTG+GGG + chr7_2:8832218-8832237 None:intergenic 40.0%
CACCACTGAAACACTAGATT+GGG + chr7_2:8832219-8832238 None:intergenic 40.0%
! ACAACACTTGCCTTCAAGTT+TGG + chr7_2:8832391-8832410 None:intergenic 40.0%
! AAGAAGTAGATGGCCTTTTC+TGG - chr7_2:8832600-8832619 Msa1047760:intron 40.0%
AGATACTATCAACAGCCTAG+TGG + chr7_2:8833215-8833234 None:intergenic 40.0%
GCATTGTAAGTAGTGGCTAT+AGG - chr7_2:8833336-8833355 Msa1047760:CDS 40.0%
TAAGTAGTGGCTATAGGTTG+TGG - chr7_2:8833342-8833361 Msa1047760:CDS 40.0%
TTCTGCGATGCACTATTAAG+TGG - chr7_2:8833386-8833405 Msa1047760:CDS 40.0%
TGGATAATGTTGTCGAATGG+TGG - chr7_2:8833406-8833425 Msa1047760:intron 40.0%
TCACGGATCAAGGAAAATAG+CGG + chr7_2:8833478-8833497 None:intergenic 40.0%
ATGTTATCACTCACGGATCA+AGG + chr7_2:8833488-8833507 None:intergenic 40.0%
! ATCACACTTGATGACATTGG+TGG - chr7_2:8833520-8833539 Msa1047760:CDS 40.0%
TATGCTAAAGCATGTCTTGG+GGG - chr7_2:8833564-8833583 Msa1047760:CDS 40.0%
GTATCCTTGTGTGCAATTTC+TGG - chr7_2:8833639-8833658 Msa1047760:intron 40.0%
AATGCCAGAAATTGCACACA+AGG + chr7_2:8833646-8833665 None:intergenic 40.0%
AGACAAGAAATACAGGTGAC+TGG + chr7_2:8833669-8833688 None:intergenic 40.0%
TTTCATGAACATCCTGGAAG+CGG + chr7_2:8833785-8833804 None:intergenic 40.0%
CTTCCAGGATGTTCATGAAA+CGG - chr7_2:8833785-8833804 Msa1047760:CDS 40.0%
TGGAATCTTGCTTTCAATCC+TGG - chr7_2:8833822-8833841 Msa1047760:intron 40.0%
CTTTGGCCTACATGTTTGAT+GGG - chr7_2:8833943-8833962 Msa1047760:intron 40.0%
TTACCTCCCATCAAACATGT+AGG + chr7_2:8833952-8833971 None:intergenic 40.0%
!! ACCCTAAGTTTGTTACAAGC+AGG + chr7_2:8833990-8834009 None:intergenic 40.0%
!! TGGGTGCTGGAATAAACATT+TGG + chr7_2:8834253-8834272 None:intergenic 40.0%
TTTACTTTGTATGTGGGTGC+TGG + chr7_2:8834266-8834285 None:intergenic 40.0%
! TCACAACGTGTTTTGCAGAA+TGG - chr7_2:8834483-8834502 Msa1047760:CDS 40.0%
! TCTAAAAGTGTGGGCTTAGA+TGG - chr7_2:8834544-8834563 Msa1047760:CDS 40.0%
CTACTTTGAGTGGCATTAGA+AGG + chr7_2:8834736-8834755 None:intergenic 40.0%
ACACAACATTAACACGACAC+TGG + chr7_2:8834852-8834871 None:intergenic 40.0%
!! CAAGCTTTGAGTATAGACGA+TGG + chr7_2:8835415-8835434 None:intergenic 40.0%
AGCATAGATGAAAACCAAGC+AGG + chr7_2:8835473-8835492 None:intergenic 40.0%
!! GCTTGGTTTTCATCTATGCT+AGG - chr7_2:8835473-8835492 Msa1047760:CDS 40.0%
ATGTGATCGCATTGTGGTTT+CGG + chr7_2:8835558-8835577 None:intergenic 40.0%
! GCAAAGATTTTTGCTTCGAG+AGG + chr7_2:8835855-8835874 None:intergenic 40.0%
TCGAAGCAAAAATCTTTGCC+AGG - chr7_2:8835856-8835875 Msa1047760:intron 40.0%
GAGATTACGAAGAACAATCC+TGG + chr7_2:8835877-8835896 None:intergenic 40.0%
ATCAGTGAGCAGTGTTCTTA+TGG + chr7_2:8836028-8836047 None:intergenic 40.0%
TGTCAAGGCTAAACTAGACT+AGG - chr7_2:8836186-8836205 Msa1047760:five_prime_UTR 40.0%
AGGGACGAAGAAGAGAGAAT+GGG + chr7_2:8823879-8823898 None:intergenic 45.0%
TAGGGACGAAGAAGAGAGAA+TGG + chr7_2:8823880-8823899 None:intergenic 45.0%
TTCTCTCTCTCTCTCTCTCT+AGG - chr7_2:8823909-8823928 Msa1047760:three_prime_UTR 45.0%
GAAGAAGTGAAAGGGGTAAG+GGG + chr7_2:8823988-8824007 None:intergenic 45.0%
AGGGTAGTGAAAATCGAAGC+TGG + chr7_2:8824082-8824101 None:intergenic 45.0%
GAAATATGAGCCGTAGAGTG+AGG - chr7_2:8824525-8824544 Msa1047760:intron 45.0%
AGGAGGAAAGTGGCAAGAAA+AGG - chr7_2:8824545-8824564 Msa1047760:intron 45.0%
CTACCTCGTCTTGAATTTCC+GGG + chr7_2:8824595-8824614 None:intergenic 45.0%
GCTACCTCGTCTTGAATTTC+CGG + chr7_2:8824596-8824615 None:intergenic 45.0%
GGAAATTCAAGACGAGGTAG+CGG - chr7_2:8824595-8824614 Msa1047760:intron 45.0%
AAGCTGGAGGAGTTGTTGAT+TGG - chr7_2:8824624-8824643 Msa1047760:intron 45.0%
CAGCAACTTGTAAGACATGG+AGG - chr7_2:8824717-8824736 Msa1047760:intron 45.0%
TGTAAGACATGGAGGGTTCT+CGG - chr7_2:8824725-8824744 Msa1047760:intron 45.0%
TCCGTGTTTGTGGAGTTCTT+TGG - chr7_2:8824754-8824773 Msa1047760:intron 45.0%
AGCAAGTGAAGCTGCAACAT+TGG + chr7_2:8824804-8824823 None:intergenic 45.0%
GTGTGCATCTTCAGAAGCTT+AGG - chr7_2:8824831-8824850 Msa1047760:intron 45.0%
CTTCAGAAGCTTAGGTTTCG+TGG - chr7_2:8824839-8824858 Msa1047760:intron 45.0%
! AAATAAGCGGTGATGGTTGC+AGG - chr7_2:8824912-8824931 Msa1047760:intron 45.0%
TTGATGAAACTCAGGCTCTC+GGG - chr7_2:8825067-8825086 Msa1047760:intron 45.0%
TGCCGATGCTATTAACGCAT+TGG - chr7_2:8825105-8825124 Msa1047760:intron 45.0%
GTCCAAAGTTGACCGATATC+GGG - chr7_2:8825137-8825156 Msa1047760:intron 45.0%
AACCCGATATCGGTCAACTT+TGG + chr7_2:8825142-8825161 None:intergenic 45.0%
ATGCAAGCTCGTCAACACTA+AGG + chr7_2:8825174-8825193 None:intergenic 45.0%
!! TAGTGTTGACGAGCTTGCAT+TGG - chr7_2:8825174-8825193 Msa1047760:intron 45.0%
!! AGTGTTGACGAGCTTGCATT+GGG - chr7_2:8825175-8825194 Msa1047760:intron 45.0%
GGTTCGTTTCCTTTCTGTTG+CGG - chr7_2:8825210-8825229 Msa1047760:intron 45.0%
GTTCGTTTCCTTTCTGTTGC+GGG - chr7_2:8825211-8825230 Msa1047760:intron 45.0%
TTCGTTTCCTTTCTGTTGCG+GGG - chr7_2:8825212-8825231 Msa1047760:intron 45.0%
ACCAAGTATGAAGTGGAGTG+TGG - chr7_2:8825237-8825256 Msa1047760:intron 45.0%
ACCACACTCCACTTCATACT+TGG + chr7_2:8825241-8825260 None:intergenic 45.0%
!!! AGAACGTGTTTTTGGACTGG+AGG - chr7_2:8825509-8825528 Msa1047760:CDS 45.0%
GATAGCATCCATTCAAGCCA+AGG + chr7_2:8825577-8825596 None:intergenic 45.0%
CATAAGACTAAGCAAGAGGG+AGG + chr7_2:8825671-8825690 None:intergenic 45.0%
GAGTTCTCAAGAGGATGTTC+AGG - chr7_2:8825693-8825712 Msa1047760:intron 45.0%
TCAAGAGGATGTTCAGGAGA+GGG - chr7_2:8825699-8825718 Msa1047760:intron 45.0%
!! ATGCTAGCATCGATTGTGGA+AGG - chr7_2:8825764-8825783 Msa1047760:intron 45.0%
!! TGCTAGCATCGATTGTGGAA+GGG - chr7_2:8825765-8825784 Msa1047760:intron 45.0%
! ATTTTGCAAGTCCAAGGAGG+AGG + chr7_2:8825822-8825841 None:intergenic 45.0%
CATTTGACACGACACTGACA+TGG - chr7_2:8826000-8826019 Msa1047760:intron 45.0%
!! GTAGCACCGACACTTCAAAT+TGG + chr7_2:8826106-8826125 None:intergenic 45.0%
!! CATGCAAAAGGCATTGGCTA+TGG + chr7_2:8826137-8826156 None:intergenic 45.0%
! GGTATGCATGCAAAAGGCAT+TGG + chr7_2:8826143-8826162 None:intergenic 45.0%
! CGTCAGTCAAGGTTTTTCGT+TGG + chr7_2:8826224-8826243 None:intergenic 45.0%
CTTGGCTACATTGGCATTCA+CGG + chr7_2:8826304-8826323 None:intergenic 45.0%
! AGATCCTTGCTAGTTTGGCT+AGG - chr7_2:8826349-8826368 Msa1047760:intron 45.0%
TTGACCTAGCCAAACTAGCA+AGG + chr7_2:8826356-8826375 None:intergenic 45.0%
GGCTAGGTCAATGAACAAAC+TGG - chr7_2:8826365-8826384 Msa1047760:intron 45.0%
! TGGTGGAGTACAAGCTTTAG+TGG - chr7_2:8826546-8826565 Msa1047760:intron 45.0%
CAATACTCCATCTCCAGTAG+AGG + chr7_2:8826590-8826609 None:intergenic 45.0%
CTCTACTGGAGATGGAGTAT+TGG - chr7_2:8826588-8826607 Msa1047760:intron 45.0%
!!! TTTTTTCAGGAACGTGCAGC+CGG - chr7_2:8826700-8826719 Msa1047760:intron 45.0%
AGCCAAATTAGCCAATGCAC+CGG + chr7_2:8826722-8826741 None:intergenic 45.0%
TGATGACAAGTGCAGTACAG+AGG - chr7_2:8826744-8826763 Msa1047760:intron 45.0%
GTCAACATTGTGGTCCATTC+TGG - chr7_2:8827487-8827506 Msa1047760:intron 45.0%
TTGGCAAATTTAGCCGCTCA+TGG - chr7_2:8827692-8827711 Msa1047760:intron 45.0%
AGATTACCTGACACCCTCAT+GGG + chr7_2:8827795-8827814 None:intergenic 45.0%
AAGATTACCTGACACCCTCA+TGG + chr7_2:8827796-8827815 None:intergenic 45.0%
TGTGGAACAACAGTAGTCCT+TGG + chr7_2:8828042-8828061 None:intergenic 45.0%
GCTATGGCATTGTAGCATAG+TGG - chr7_2:8828086-8828105 Msa1047760:intron 45.0%
CCCTCATGTAAGAACGCTTT+AGG + chr7_2:8828385-8828404 None:intergenic 45.0%
TTCTATAGGCAAGAAGCTGC+TGG - chr7_2:8828548-8828567 Msa1047760:intron 45.0%
AATAGCAGGGACTAAGGAGA+CGG + chr7_2:8828730-8828749 None:intergenic 45.0%
!! TGTCAGTTTCTGAAGCCAAC+AGG - chr7_2:8829079-8829098 Msa1047760:intron 45.0%
! TGGAACTGTAAGGTACCTGT+TGG + chr7_2:8829097-8829116 None:intergenic 45.0%
TTCCGATGGCACAAACGTAT+CGG - chr7_2:8829327-8829346 Msa1047760:intron 45.0%
TTCCGATACGTTTGTGCCAT+CGG + chr7_2:8829332-8829351 None:intergenic 45.0%
ACAAACGTATCGGAACCTCT+CGG - chr7_2:8829337-8829356 Msa1047760:intron 45.0%
!! GTTTGATGGCGGCGTAATTA+TGG + chr7_2:8829457-8829476 None:intergenic 45.0%
ACCGTATAGCTTCGCAGATT+GGG + chr7_2:8829614-8829633 None:intergenic 45.0%
AGTTGGAAGGAGCAAAGAGA+AGG + chr7_2:8829705-8829724 None:intergenic 45.0%
GTGGAAGTTTCCGACAATGA+TGG + chr7_2:8829735-8829754 None:intergenic 45.0%
! GAATCCACAAGTGTTGTAGG+TGG + chr7_2:8829775-8829794 None:intergenic 45.0%
! AGGGAATCCACAAGTGTTGT+AGG + chr7_2:8829778-8829797 None:intergenic 45.0%
AGAAGGCAGTAGAGTTGGAA+GGG + chr7_2:8829797-8829816 None:intergenic 45.0%
! GCTCTTTTTGATCTTGGGTG+GGG - chr7_2:8829987-8830006 Msa1047760:intron 45.0%
TGCTTTACAACAGTGGGACT+TGG - chr7_2:8830034-8830053 Msa1047760:intron 45.0%
GCTTTACAACAGTGGGACTT+GGG - chr7_2:8830035-8830054 Msa1047760:intron 45.0%
!! GTGGGACTTGGGATTTTAGT+TGG - chr7_2:8830046-8830065 Msa1047760:intron 45.0%
TGTTCGCTTGTTCTTGTCCA+TGG - chr7_2:8830176-8830195 Msa1047760:intron 45.0%
CGTCAATTAGATCCCAATGG+AGG + chr7_2:8830250-8830269 None:intergenic 45.0%
TTGCTATAGGGGAGTCTACT+AGG - chr7_2:8830300-8830319 Msa1047760:intron 45.0%
! TATTTGTTGGGGGATAGAGG+TGG - chr7_2:8830637-8830656 Msa1047760:intron 45.0%
GATAGAGGTGGCAAAATCCA+AGG - chr7_2:8830649-8830668 Msa1047760:intron 45.0%
CCACAACTCAAGTATGACCA+TGG + chr7_2:8830955-8830974 None:intergenic 45.0%
! CCATGGTCATACTTGAGTTG+TGG - chr7_2:8830952-8830971 Msa1047760:intron 45.0%
ATGTGAGCTGCTATTCTGCT+GGG + chr7_2:8831110-8831129 None:intergenic 45.0%
TAGATTTGGAGAGGTTGCAC+GGG - chr7_2:8831155-8831174 Msa1047760:intron 45.0%
! CATGTTTTCCCAAGTCCTTG+AGG - chr7_2:8831323-8831342 Msa1047760:intron 45.0%
TTTCCAACACACCATCATGC+TGG + chr7_2:8831392-8831411 None:intergenic 45.0%
TGGATGTGCTAGAGTCACAT+TGG - chr7_2:8831648-8831667 Msa1047760:intron 45.0%
GTGCTAGAGTCACATTGGAA+AGG - chr7_2:8831653-8831672 Msa1047760:intron 45.0%
!!! GTTGCTTTTATGGGAAGGGA+TGG - chr7_2:8831725-8831744 Msa1047760:intron 45.0%
GAGAGCTAACTCTCGACTAA+AGG - chr7_2:8831988-8832007 Msa1047760:intron 45.0%
CATTGACAGAGACTAGGTTG+TGG + chr7_2:8832088-8832107 None:intergenic 45.0%
CCACTGAAACACTAGATTGG+GGG + chr7_2:8832217-8832236 None:intergenic 45.0%
CCACCACTGAAACACTAGAT+TGG + chr7_2:8832220-8832239 None:intergenic 45.0%
CCAATCTAGTGTTTCAGTGG+TGG - chr7_2:8832217-8832236 Msa1047760:intron 45.0%
GATAGGAACCTCTACCTGAT+AGG + chr7_2:8832285-8832304 None:intergenic 45.0%
TGTTTGCTCAGCATTGCCAT+TGG - chr7_2:8832858-8832877 Msa1047760:intron 45.0%
TTGTCGAATGGTGGCTATAG+AGG - chr7_2:8833415-8833434 Msa1047760:intron 45.0%
! GCTTTACGAATAGTGGAGGA+AGG - chr7_2:8833849-8833868 Msa1047760:intron 45.0%
! TTACGAATAGTGGAGGAAGG+TGG - chr7_2:8833852-8833871 Msa1047760:intron 45.0%
!! ATTTATGGCAGCACTGGCTT+TGG - chr7_2:8833926-8833945 Msa1047760:intron 45.0%
GCTTTGGCCTACATGTTTGA+TGG - chr7_2:8833942-8833961 Msa1047760:intron 45.0%
CTTAGATGGAGCCAGAAGAA+TGG - chr7_2:8834558-8834577 Msa1047760:CDS 45.0%
GTGTTTCAGAGCCATTCTTC+TGG + chr7_2:8834572-8834591 None:intergenic 45.0%
AAACCTGCATCTCAGATGTC+CGG + chr7_2:8834707-8834726 None:intergenic 45.0%
! TTCTTCAGTGGTGCTGAAGT+TGG - chr7_2:8835364-8835383 Msa1047760:CDS 45.0%
AGCAGGTTGCTATAGTTACC+TGG + chr7_2:8835456-8835475 None:intergenic 45.0%
GGTAACTATAGCAACCTGCT+TGG - chr7_2:8835456-8835475 Msa1047760:CDS 45.0%
AAAGGTCTGCGATCACAATG+TGG - chr7_2:8835505-8835524 Msa1047760:CDS 45.0%
AAGGTCTGCGATCACAATGT+GGG - chr7_2:8835506-8835525 Msa1047760:CDS 45.0%
CCTCAAATGTGATCGCATTG+TGG + chr7_2:8835564-8835583 None:intergenic 45.0%
CCACAATGCGATCACATTTG+AGG - chr7_2:8835561-8835580 Msa1047760:CDS 45.0%
TCACAGTTTACAATTCCCGG+TGG - chr7_2:8835744-8835763 Msa1047760:intron 45.0%
GCAGTGTTCTTATGGCAAGT+CGG + chr7_2:8836020-8836039 None:intergenic 45.0%
GGGACGAAGAAGAGAGAATG+GGG + chr7_2:8823878-8823897 None:intergenic 50.0%
GGTGATTGGGATGAGGAAGA+TGG + chr7_2:8823967-8823986 None:intergenic 50.0%
GAAAGGGGTAAGGGGTGATT+GGG + chr7_2:8823980-8823999 None:intergenic 50.0%
TGAAAGGGGTAAGGGGTGAT+TGG + chr7_2:8823981-8824000 None:intergenic 50.0%
CTAGACCCTAGAAAGGGTCA+AGG + chr7_2:8824034-8824053 None:intergenic 50.0%
!! CTTGACCCTTTCTAGGGTCT+AGG - chr7_2:8824032-8824051 Msa1047760:three_prime_UTR 50.0%
ATATGAGCCGTAGAGTGAGG+AGG - chr7_2:8824528-8824547 Msa1047760:intron 50.0%
CCACTTTCCTCCTCACTCTA+CGG + chr7_2:8824538-8824557 None:intergenic 50.0%
!! AAATGCGGTTTCGAGTTGCC+CGG - chr7_2:8824574-8824593 Msa1047760:intron 50.0%
TTGCCCGGAAATTCAAGACG+AGG - chr7_2:8824589-8824608 Msa1047760:intron 50.0%
!! TCAAGACGAGGTAGCGGATT+TGG - chr7_2:8824601-8824620 Msa1047760:intron 50.0%
! CTGGAGGAGTTGTTGATTGG+AGG - chr7_2:8824627-8824646 Msa1047760:intron 50.0%
TCGGTAACTCTCCGTGTTTG+TGG - chr7_2:8824744-8824763 Msa1047760:intron 50.0%
TTGCGCGAAATAAGCGGTGA+TGG - chr7_2:8824905-8824924 Msa1047760:intron 50.0%
GACTGATGCAACTCTTGCTG+TGG - chr7_2:8824940-8824959 Msa1047760:intron 50.0%
! CTCTTGCTGTGGTTGTAGCA+CGG - chr7_2:8824951-8824970 Msa1047760:intron 50.0%
GCAGTCGATGAACCCGATAT+CGG + chr7_2:8825152-8825171 None:intergenic 50.0%
CTCAAGAGGATGTTCAGGAG+AGG - chr7_2:8825698-8825717 Msa1047760:intron 50.0%
GCTGAAGCAGTTATGCGAGA+TGG - chr7_2:8825787-8825806 Msa1047760:intron 50.0%
GAAGCAGTTATGCGAGATGG+TGG - chr7_2:8825790-8825809 Msa1047760:intron 50.0%
ATACCTTAGCTGCCTCAGAC+TGG + chr7_2:8825861-8825880 None:intergenic 50.0%
! GCACCGACACTTCAAATTGG+AGG + chr7_2:8826103-8826122 None:intergenic 50.0%
CGTGAATGCCAATGTAGCCA+AGG - chr7_2:8826302-8826321 Msa1047760:CDS 50.0%
GAATGCCAATGTAGCCAAGG+CGG - chr7_2:8826305-8826324 Msa1047760:CDS 50.0%
GAACAAACTGGTGGCTGAAG+AGG - chr7_2:8826377-8826396 Msa1047760:intron 50.0%
AAGAGGCTGCTGGAGGATTA+TGG - chr7_2:8826394-8826413 Msa1047760:intron 50.0%
! CTCTGTTGGAGAAGAGCACA+AGG - chr7_2:8826422-8826441 Msa1047760:intron 50.0%
CTGAAGCGGCTTCCATCATA+GGG - chr7_2:8826508-8826527 Msa1047760:intron 50.0%
!! TCCATCATAGGGTGCCATTG+CGG - chr7_2:8826519-8826538 Msa1047760:intron 50.0%
AAGTGGTCCTCTACTGGAGA+TGG - chr7_2:8826580-8826599 Msa1047760:intron 50.0%
!! AGCCGGTGCATTGGCTAATT+TGG - chr7_2:8826717-8826736 Msa1047760:intron 50.0%
AGTACAGAGGTTGCGTTAGC+AGG - chr7_2:8826757-8826776 Msa1047760:intron 50.0%
GCTCGTCACTGCAAATTCGA+GGG - chr7_2:8826805-8826824 Msa1047760:intron 50.0%
ACATGGCTATCCAATTCCGG+TGG - chr7_2:8827137-8827156 Msa1047760:intron 50.0%
CGAGCAGCCTAGTGTTTAAG+AGG + chr7_2:8827668-8827687 None:intergenic 50.0%
ACTGTTGCTATCGCCATGAG+CGG + chr7_2:8827708-8827727 None:intergenic 50.0%
AAGAAGCTGCTGGTGCACTT+TGG - chr7_2:8828558-8828577 Msa1047760:intron 50.0%
AGCTGGTGGAGTTCAAGCTT+TGG - chr7_2:8828622-8828641 Msa1047760:intron 50.0%
TCCTGTTCTAATGCTTCCGC+TGG - chr7_2:8829021-8829040 Msa1047760:intron 50.0%
!! TCCAGCGGAAGCATTAGAAC+AGG + chr7_2:8829025-8829044 None:intergenic 50.0%
TTCCGCTGGACTTCAAGAGA+GGG - chr7_2:8829035-8829054 Msa1047760:intron 50.0%
TGGAGTAGCCAACCAGTCAA+TGG - chr7_2:8829201-8829220 Msa1047760:intron 50.0%
GGAGTAGCCAACCAGTCAAT+GGG - chr7_2:8829202-8829221 Msa1047760:intron 50.0%
GAAGAAGCCCCCCCATATAT+CGG - chr7_2:8829296-8829315 Msa1047760:intron 50.0%
ACTGATCTCACCACCAGAAC+CGG - chr7_2:8829410-8829429 Msa1047760:intron 50.0%
TGGCGGCGTAATTATGGGAA+TGG + chr7_2:8829451-8829470 None:intergenic 50.0%
TCAAGTGCGACTTGAAGCTC+TGG - chr7_2:8829490-8829509 Msa1047760:intron 50.0%
GGAAAGGGCTTCAAACACAC+CGG + chr7_2:8829542-8829561 None:intergenic 50.0%
CACATTGGAAGCAGCGGAAA+GGG + chr7_2:8829557-8829576 None:intergenic 50.0%
ACACATTGGAAGCAGCGGAA+AGG + chr7_2:8829558-8829577 None:intergenic 50.0%
CGCAAACACATTGGAAGCAG+CGG + chr7_2:8829563-8829582 None:intergenic 50.0%
CGTATAGCTTCGCAGATTGG+GGG + chr7_2:8829612-8829631 None:intergenic 50.0%
CCGTATAGCTTCGCAGATTG+GGG + chr7_2:8829613-8829632 None:intergenic 50.0%
CCCCAATCTGCGAAGCTATA+CGG - chr7_2:8829610-8829629 Msa1047760:intron 50.0%
GACCGTATAGCTTCGCAGAT+TGG + chr7_2:8829615-8829634 None:intergenic 50.0%
CTATACGGTCTCGTCTGATG+TGG - chr7_2:8829625-8829644 Msa1047760:intron 50.0%
TCAGTGTACTCGACAGTGAC+AGG + chr7_2:8829658-8829677 None:intergenic 50.0%
AGTACACTGAGTAATGCCCC+AGG - chr7_2:8829668-8829687 Msa1047760:intron 50.0%
AGAAGGATTCGCTCGAACCT+GGG + chr7_2:8829688-8829707 None:intergenic 50.0%
! GGTGGAGGCACAGTTACTAA+GGG + chr7_2:8829757-8829776 None:intergenic 50.0%
! AGGTGGAGGCACAGTTACTA+AGG + chr7_2:8829758-8829777 None:intergenic 50.0%
! TCCACAAGTGTTGTAGGTGG+AGG + chr7_2:8829772-8829791 None:intergenic 50.0%
GAGAAGGCAGTAGAGTTGGA+AGG + chr7_2:8829798-8829817 None:intergenic 50.0%
TCCAACTCTACTGCCTTCTC+CGG - chr7_2:8829798-8829817 Msa1047760:intron 50.0%
TCTAGTGTAGGTGTTAGGGC+CGG + chr7_2:8829820-8829839 None:intergenic 50.0%
! TTTTGATCTTGGGTGGGGAC+AGG - chr7_2:8829992-8830011 Msa1047760:intron 50.0%
CTAATGGCGAATAGCAGCCA+TGG + chr7_2:8830196-8830215 None:intergenic 50.0%
GAGGTGGCAAAATCCAAGGA+CGG - chr7_2:8830653-8830672 Msa1047760:intron 50.0%
CAAAACTGGATCCTGTCTGC+AGG + chr7_2:8831011-8831030 None:intergenic 50.0%
! CTGCAGACAGGATCCAGTTT+TGG - chr7_2:8831009-8831028 Msa1047760:intron 50.0%
CATGTGAGCTGCTATTCTGC+TGG + chr7_2:8831111-8831130 None:intergenic 50.0%
CGAGAACTCCTCAAGGACTT+GGG + chr7_2:8831334-8831353 None:intergenic 50.0%
TCGAGAACTCCTCAAGGACT+TGG + chr7_2:8831335-8831354 None:intergenic 50.0%
CCCCCAATCTAGTGTTTCAG+TGG - chr7_2:8832214-8832233 Msa1047760:intron 50.0%
AGCATTGCCATTGGACGAGA+AGG - chr7_2:8832867-8832886 Msa1047760:intron 50.0%
ATTGCCATTGGACGAGAAGG+AGG - chr7_2:8832870-8832889 Msa1047760:intron 50.0%
CGTTGCACCTCTGATTGCAT+TGG - chr7_2:8832893-8832912 Msa1047760:intron 50.0%
GATCGTGCCAATGCAATCAG+AGG + chr7_2:8832903-8832922 None:intergenic 50.0%
AACATCCTGGAAGCGGAAAG+TGG + chr7_2:8833778-8833797 None:intergenic 50.0%
CAGCCGTTTCATGAACATCC+TGG + chr7_2:8833791-8833810 None:intergenic 50.0%
GATGTTCATGAAACGGCTGC+AGG - chr7_2:8833792-8833811 Msa1047760:CDS 50.0%
TGGCCTACATGTTTGATGGG+AGG - chr7_2:8833946-8833965 Msa1047760:intron 50.0%
! AGTGCTCGCATTCTAGAAGC+CGG - chr7_2:8834685-8834704 Msa1047760:CDS 50.0%
TGAAGCAGTGACACAGACAC+TGG + chr7_2:8834875-8834894 None:intergenic 50.0%
TGCAGCATTTGCTCTACTCC+AGG - chr7_2:8835435-8835454 Msa1047760:CDS 50.0%
GGTAAGGGGTGATTGGGATG+AGG + chr7_2:8823974-8823993 None:intergenic 55.0%
CCGTAGAGTGAGGAGGAAAG+TGG - chr7_2:8824535-8824554 Msa1047760:intron 55.0%
!! GAGGTAGCGGATTTGGAAGC+TGG - chr7_2:8824608-8824627 Msa1047760:intron 55.0%
!! GTAGCGGATTTGGAAGCTGG+AGG - chr7_2:8824611-8824630 Msa1047760:intron 55.0%
GAAGCTTAGGTTTCGTGGCG+CGG - chr7_2:8824844-8824863 Msa1047760:intron 55.0%
TAGGTTTCGTGGCGCGGATT+CGG - chr7_2:8824850-8824869 Msa1047760:intron 55.0%
! TTGGTGTCCCCGCAACAGAA+AGG + chr7_2:8825222-8825241 None:intergenic 55.0%
CGGGGACACCAAGTATGAAG+TGG - chr7_2:8825230-8825249 Msa1047760:intron 55.0%
TCTGCTGAGAGCCCTCAACA+AGG - chr7_2:8825613-8825632 Msa1047760:intron 55.0%
AGAGGATGTTCAGGAGAGGG+CGG - chr7_2:8825702-8825721 Msa1047760:intron 55.0%
!! GTCGGTGTCGTGTGAGATAC+TGG - chr7_2:8826072-8826091 Msa1047760:intron 55.0%
TGCAACCGCCTTGGCTACAT+TGG + chr7_2:8826313-8826332 None:intergenic 55.0%
GCTGAAGCGGCTTCCATCAT+AGG - chr7_2:8826507-8826526 Msa1047760:intron 55.0%
TCCGCAATGGCACCCTATGA+TGG + chr7_2:8826523-8826542 None:intergenic 55.0%
TACTCCACCAGCTTCCGCAA+TGG + chr7_2:8826536-8826555 None:intergenic 55.0%
ACAGAGGTTGCGTTAGCAGG+AGG - chr7_2:8826760-8826779 Msa1047760:intron 55.0%
CGCTCGTCACTGCAAATTCG+AGG - chr7_2:8826804-8826823 Msa1047760:intron 55.0%
! ATTCGAGGGAGTGCAAGAGC+AGG - chr7_2:8826819-8826838 Msa1047760:intron 55.0%
ACACTAGGCTGCTCGTGCAT+TGG - chr7_2:8827673-8827692 Msa1047760:intron 55.0%
GCTGCTGTTGGACAAGAAGC+AGG - chr7_2:8827734-8827753 Msa1047760:intron 55.0%
ACAAGAAGCAGGTGCTCTCG+AGG - chr7_2:8827745-8827764 Msa1047760:intron 55.0%
ACTTACGCGTTCTGCCCATG+AGG - chr7_2:8827778-8827797 Msa1047760:intron 55.0%
CTTACGCGTTCTGCCCATGA+GGG - chr7_2:8827779-8827798 Msa1047760:intron 55.0%
AACTCCACCAGCTGCTGCAA+TGG + chr7_2:8828615-8828634 None:intergenic 55.0%
CTTCCGCTGGACTTCAAGAG+AGG - chr7_2:8829034-8829053 Msa1047760:intron 55.0%
AGCCCTCTCTTGAAGTCCAG+CGG + chr7_2:8829040-8829059 None:intergenic 55.0%
TCTATTGGCCCCCACATTGC+TGG - chr7_2:8829274-8829293 Msa1047760:intron 55.0%
GGCTTCTTCCAGCAATGTGG+GGG + chr7_2:8829285-8829304 None:intergenic 55.0%
GGGCTTCTTCCAGCAATGTG+GGG + chr7_2:8829286-8829305 None:intergenic 55.0%
GGGGCTTCTTCCAGCAATGT+GGG + chr7_2:8829287-8829306 None:intergenic 55.0%
GGCGGAACATAGAATCCGAG+AGG + chr7_2:8829355-8829374 None:intergenic 55.0%
ATGGCTCGATTGGGAGATGC+CGG + chr7_2:8829432-8829451 None:intergenic 55.0%
CAAACACACCGGCATACGCT+TGG + chr7_2:8829531-8829550 None:intergenic 55.0%
GTGTACTCGACAGTGACAGG+AGG + chr7_2:8829655-8829674 None:intergenic 55.0%
GAAGGATTCGCTCGAACCTG+GGG + chr7_2:8829687-8829706 None:intergenic 55.0%
GAGAAGGATTCGCTCGAACC+TGG + chr7_2:8829689-8829708 None:intergenic 55.0%
! GGAGGCACAGTTACTAAGGG+TGG + chr7_2:8829754-8829773 None:intergenic 55.0%
GCCTCCACCTACAACACTTG+TGG - chr7_2:8829768-8829787 Msa1047760:intron 55.0%
GGAAAAGCTCTCCTGCAGAC+AGG - chr7_2:8830997-8831016 Msa1047760:intron 55.0%
! GCTCCAGCATGATGGTGTGT+TGG - chr7_2:8831386-8831405 Msa1047760:intron 55.0%
AACGCCTCCTTCTCGTCCAA+TGG + chr7_2:8832877-8832896 None:intergenic 55.0%
! TGCATTGGCACGATCCGAAG+CGG - chr7_2:8832908-8832927 Msa1047760:intron 55.0%
CTAAAGCATGTCTTGGGGGC+TGG - chr7_2:8833568-8833587 Msa1047760:CDS 55.0%
GCAAACCACTTTCCGCTTCC+AGG - chr7_2:8833770-8833789 Msa1047760:CDS 55.0%
GGCACGATTTATGGCAGCAC+TGG - chr7_2:8833920-8833939 Msa1047760:intron 55.0%
TGCAGGAGCTGACGATGAAG+CGG + chr7_2:8834644-8834663 None:intergenic 55.0%
GTAACCTGTGCTAGTGCTGC+AGG + chr7_2:8834661-8834680 None:intergenic 55.0%
! AAGCCGGACATCTGAGATGC+AGG - chr7_2:8834701-8834720 Msa1047760:CDS 55.0%
CTTTCTGCATGAGGCTGGCA+TGG + chr7_2:8835785-8835804 None:intergenic 55.0%
ACCTGCTTTCTGCATGAGGC+TGG + chr7_2:8835790-8835809 None:intergenic 55.0%
CTGCACCTGCTTTCTGCATG+AGG + chr7_2:8835794-8835813 None:intergenic 55.0%
AACTCAGGCTCTCGGGCATC+AGG - chr7_2:8825074-8825093 Msa1047760:intron 60.0%
ACTCAGGCTCTCGGGCATCA+GGG - chr7_2:8825075-8825094 Msa1047760:intron 60.0%
GCTGAGAGCCCTCAACAAGG+AGG - chr7_2:8825616-8825635 Msa1047760:intron 60.0%
! GCTCCAGTCTGAGGCAGCTA+AGG - chr7_2:8825855-8825874 Msa1047760:intron 60.0%
AGCCAAGGCGGTTGCAGAAG+AGG - chr7_2:8826317-8826336 Msa1047760:intron 60.0%
GCCAAGGCGGTTGCAGAAGA+GGG - chr7_2:8826318-8826337 Msa1047760:intron 60.0%
AAGGCGGTTGCAGAAGAGGG+CGG - chr7_2:8826321-8826340 Msa1047760:intron 60.0%
!! TAGGGTGCCATTGCGGAAGC+TGG - chr7_2:8826526-8826545 Msa1047760:intron 60.0%
!! GTTCTGCCCATGAGGGTGTC+AGG - chr7_2:8827786-8827805 Msa1047760:intron 60.0%
GGACTTCAAGAGAGGGCTGC+TGG - chr7_2:8829042-8829061 Msa1047760:intron 60.0%
AGAGGGCTGCTGGTGCTCTA+TGG - chr7_2:8829052-8829071 Msa1047760:intron 60.0%
GAGGGCTGCTGGTGCTCTAT+GGG - chr7_2:8829053-8829072 Msa1047760:intron 60.0%
AGGGCTGCTGGTGCTCTATG+GGG - chr7_2:8829054-8829073 Msa1047760:intron 60.0%
GGGGGCTTCTTCCAGCAATG+TGG + chr7_2:8829288-8829307 None:intergenic 60.0%
CTGGAACAAGGGGCAGCAGA+CGG + chr7_2:8829376-8829395 None:intergenic 60.0%
!! TTGGGAGATGCCGGTTCTGG+TGG + chr7_2:8829423-8829442 None:intergenic 60.0%
!! CGATTGGGAGATGCCGGTTC+TGG + chr7_2:8829426-8829445 None:intergenic 60.0%
GCCGGAGAAGGCAGTAGAGT+TGG + chr7_2:8829802-8829821 None:intergenic 60.0%
GTAGGTGTTAGGGCCGGAGA+AGG + chr7_2:8829814-8829833 None:intergenic 60.0%
TCTTGGGTGGGGACAGGCTA+TGG - chr7_2:8829998-8830017 Msa1047760:intron 60.0%
TGGGGGGCAACCTCATCTCT+TGG - chr7_2:8831047-8831066 Msa1047760:CDS 60.0%
ATTGGCACGATCCGAAGCGG+AGG - chr7_2:8832911-8832930 Msa1047760:intron 60.0%
AGCTCCTGCAGCACTAGCAC+AGG - chr7_2:8834654-8834673 Msa1047760:CDS 60.0%
GCCAGCCTCATGCAGAAAGC+AGG - chr7_2:8835786-8835805 Msa1047760:intron 60.0%
! TTCGAGAGGCGCAGTTGCTG+CGG + chr7_2:8835841-8835860 None:intergenic 60.0%
GGTGGCATACGCCTCCTCCT+TGG - chr7_2:8825808-8825827 Msa1047760:intron 65.0%
CAGGGAAGGGCTCCAGTCTG+AGG - chr7_2:8825846-8825865 Msa1047760:intron 65.0%
GCCCTCTTCTGCAACCGCCT+TGG + chr7_2:8826322-8826341 None:intergenic 65.0%
AGGCGGTTGCAGAAGAGGGC+GGG - chr7_2:8826322-8826341 Msa1047760:intron 65.0%
CTGGTGGCTGAAGAGGCTGC+TGG - chr7_2:8826384-8826403 Msa1047760:intron 65.0%
GTGGCTGAAGAGGCTGCTGG+AGG - chr7_2:8826387-8826406 Msa1047760:intron 65.0%
!! GGTGCCATTGCGGAAGCTGG+TGG - chr7_2:8826529-8826548 Msa1047760:intron 65.0%
GGAACGTGCAGCCGGTGCAT+TGG - chr7_2:8826708-8826727 Msa1047760:intron 65.0%
CGAGAGGCCATTGCAGCAGC+TGG - chr7_2:8828605-8828624 Msa1047760:intron 65.0%
GAGGCCATTGCAGCAGCTGG+TGG - chr7_2:8828608-8828627 Msa1047760:intron 65.0%
GAACAAGGGGCAGCAGACGG+CGG + chr7_2:8829373-8829392 None:intergenic 65.0%
TGCACAGCGTGTCGTCCACC+GGG + chr7_2:8835762-8835781 None:intergenic 65.0%
GTGCACAGCGTGTCGTCCAC+CGG + chr7_2:8835763-8835782 None:intergenic 65.0%
GTTCAGGAGAGGGCGGCCAC+AGG - chr7_2:8825709-8825728 Msa1047760:intron 70.0%
! GAGAGGCGCAGTTGCTGCGG+CGG + chr7_2:8835838-8835857 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 8823818 8836305 8823818 ID=Msa1047760;Name=Msa1047760
chr7_2 mRNA 8823818 8836305 8823818 ID=Msa1047760-mRNA-1;Parent=Msa1047760;Name=Msa1047760-mRNA-1;_AED=0.07;_eAED=0.07;_QI=390|0.81|0.75|1|0.90|0.83|12|379|852
chr7_2 exon 8823818 8824373 8823818 ID=Msa1047760-mRNA-1:exon:2345;Parent=Msa1047760-mRNA-1
chr7_2 exon 8825448 8825622 8825448 ID=Msa1047760-mRNA-1:exon:2344;Parent=Msa1047760-mRNA-1
chr7_2 exon 8826156 8826331 8826156 ID=Msa1047760-mRNA-1:exon:2343;Parent=Msa1047760-mRNA-1
chr7_2 exon 8827191 8827254 8827191 ID=Msa1047760-mRNA-1:exon:2342;Parent=Msa1047760-mRNA-1
chr7_2 exon 8831023 8831071 8831023 ID=Msa1047760-mRNA-1:exon:2341;Parent=Msa1047760-mRNA-1
chr7_2 exon 8831497 8831567 8831497 ID=Msa1047760-mRNA-1:exon:2340;Parent=Msa1047760-mRNA-1
chr7_2 exon 8832316 8832443 8832316 ID=Msa1047760-mRNA-1:exon:2339;Parent=Msa1047760-mRNA-1
chr7_2 exon 8833283 8833414 8833283 ID=Msa1047760-mRNA-1:exon:2338;Parent=Msa1047760-mRNA-1
chr7_2 exon 8833514 8833594 8833514 ID=Msa1047760-mRNA-1:exon:2337;Parent=Msa1047760-mRNA-1
chr7_2 exon 8833680 8833838 8833680 ID=Msa1047760-mRNA-1:exon:2336;Parent=Msa1047760-mRNA-1
chr7_2 exon 8834247 8835623 8834247 ID=Msa1047760-mRNA-1:exon:2335;Parent=Msa1047760-mRNA-1
chr7_2 exon 8835946 8836305 8835946 ID=Msa1047760-mRNA-1:exon:2334;Parent=Msa1047760-mRNA-1
chr7_2 five_prime_UTR 8835946 8836305 8835946 ID=Msa1047760-mRNA-1:five_prime_utr;Parent=Msa1047760-mRNA-1
chr7_2 five_prime_UTR 8835594 8835623 8835594 ID=Msa1047760-mRNA-1:five_prime_utr;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8834247 8835593 8834247 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8833680 8833838 8833680 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8833514 8833594 8833514 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8833283 8833414 8833283 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8832316 8832443 8832316 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8831497 8831567 8831497 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8831023 8831071 8831023 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8827191 8827254 8827191 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8826156 8826331 8826156 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8825448 8825622 8825448 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 CDS 8824197 8824373 8824197 ID=Msa1047760-mRNA-1:cds;Parent=Msa1047760-mRNA-1
chr7_2 three_prime_UTR 8823818 8824196 8823818 ID=Msa1047760-mRNA-1:three_prime_utr;Parent=Msa1047760-mRNA-1
Gene Sequence

>Msa1047760

ATGAGCCGTAGAGTGAGGAGGAAAGTGGCAAGAAAAGGCAAAGGAAATGCGGTTTCGAGTTGCCCGGAAATTCAAGACGAGGTAGCGGATTTGGAAGCTGGAGGAGTTGTTGATTGGAGGTGTTTGCCTGATGATACAGTAATTCAGCTATTGTCATGTTTGAGTTATCGCGATCGAGCTAGTTTATCAGCAACTTGTAAGACATGGAGGGTTCTCGGTAACTCTCCGTGTTTGTGGAGTTCTTTGGATCTTCGTTCACACAAGTTTGATGCCAATGTTGCAGCTTCACTTGCTTCTAGATGTGTGCATCTTCAGAAGCTTAGGTTTCGTGGCGCGGATTCGGCTGATGCATTACTTTATCTTCGAGCTAAGAACTTGCGCGAAATAAGCGGTGATGGTTGCAGGAAGATGACTGATGCAACTCTTGCTGTGGTTGTAGCACGGCATGAGTTACTTGAGAGTCTTGTGCTTGGACCAGATTTTTGTGATAAAGTCACTAGTGATGCTATAAGAGCAGTAGCTCATTGCTGTCCAAGTTTGATGAAACTCAGGCTCTCGGGCATCAGGGATGTGAATGCCGATGCTATTAACGCATTGGCTAACTATTGTCCAAAGTTGACCGATATCGGGTTCATCGACTGCCTTAGTGTTGACGAGCTTGCATTGGGAAATGTGCAATCGGTTCGTTTCCTTTCTGTTGCGGGGACACCAAGTATGAAGTGGAGTGTGGTTACGAATCTTAAGCTTCCTAACCTGATTGGATTAGATGTTTCAAGAACTGATATCGGTCCGTCTGCTGTTTCAAGATTGTTATCCTCATCACCAAGTTTGAGAGTTTTGATTGCTTTGAATTGTCCTATCCTTGAAGAAGAGACTAGCTTTTCTGCTAGTAAATATAAGAACAAGTTGTTGATTTCCCTATCAACCGATATTTTTAAAGGACTAGCTTCTTTATTTTCCGACAATACAAATAGAGGAAAGAACGTGTTTTTGGACTGGAGGACTTCAAAGACTTACAATGATAAGGGCCTTGATGAAATCATACCTTGGCTTGAATGGATGCTATCCCATATACTTTTGCGTTCTGCTGAGAGCCCTCAACAAGGAGGTCTTGATAATTTCTGGGTTGAACAAGGTGCCTCCCTCTTGCTTAGTCTTATGCAGAGTTCTCAAGAGGATGTTCAGGAGAGGGCGGCCACAGGTCTTGCAACTTTTGTTGTAATTGATGATGAAAATGCTAGCATCGATTGTGGAAGGGCTGAAGCAGTTATGCGAGATGGTGGCATACGCCTCCTCCTTGGACTTGCAAAATCTTACAGGGAAGGGCTCCAGTCTGAGGCAGCTAAGGCTATTGCAAATTTGTCCGTGAATGCCAATGTAGCCAAGGCGGTTGCAGAAGAGGGCGGGATTGAGATCCTTGCTAGTTTGGCTAGGTCAATGAACAAACTGGTGGCTGAAGAGGCTGCTGGAGGATTATGGAATCTCTCTGTTGGAGAAGAGCACAAGGGTGCCATTGCGGAAGCTGGTGGAGTACAAGCTTTAGTGGATCTTATATTCAAGTGGTCCTCTACTGGAGATGGAGTATTGGAACGTGCAGCCGGTGCATTGGCTAATTTGGCTGCTGATGACAAGTGCAGTACAGAGGTTGCGTTAGCAGGAGGTGTACATGCTCTAGTGATGCTCGCTCGTCACTGCAAATTCGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCAAATTTAGCCGCTCATGGCGATAGCAACAGTAACAATGCTGCTGTTGGACAAGAAGCAGGTGCTCTCGAGGCTCTTGTTCAACTTACGCGTTCTGCCCATGAGGGTGTCAGGCAAGAAGCTGCTGGTGCACTTTGGAATTTGTCATTTGACGATAGAAATCGAGAGGCCATTGCAGCAGCTGAGAGGGCTGCTGGTGCTCTATGGGGATTGTCAGTTTCTGAAGCCAACAGCATTGCCATTGGACGAGAAGGAGGCGTTGCACCTCTGATTGCATTGGCACGATCCGAAGCGGAGGATGTTCATGAAACGGCTGCAGGAGCGTTATGGAATCTTGCTTTCAATCCTGGTAATGCTTTACGAATAGTGGAGGAAGGTGGAGTAGCTGCACTTGTTGAGCTCTGCTCTTCATCAGTGTCAAAAATGGCACGATTTATGGCAGCACTGGCTTTGGCCTACATGTTTGATGGGAGAATGGATGAATTTGCTTTAGTCGGCACCATGTCAGAGAGTGTTTCTAAAAGTGTGGGCTTAGATGGAGCCAGAAGAATGGCTCTGAAACACATTGAAGCATTCGTCCGTATGTTTTCTAATCAACAAGCATTTGCAGCTGCCGCTTCATCGTCAGCTCCTGCAGCACTAGCACAGTTTACAATTCCCGGTGGACGACACGCTGTGCACCATGCCAGCCTCATGCAGAAAGCAGGTGCAGCAAGAGTTCTGCGTAGTGCAGCCGCCGCAGCAACTGCGCCTCTCGAAGCAAAAATCTTTGCCAGGATTGTTCTTCGTAATCTCGAGTATCATCATATAGAGCATACTGTGTAG
Protein sequence

>Msa1047760

MSRRVRRKVARKGKGNAVSSCPEIQDEVADLEAGGVVDWRCLPDDTVIQLLSCLSYRDRASLSATCKTWRVLGNSPCLWSSLDLRSHKFDANVAASLASRCVHLQKLRFRGADSADALLYLRAKNLREISGDGCRKMTDATLAVVVARHELLESLVLGPDFCDKVTSDAIRAVAHCCPSLMKLRLSGIRDVNADAINALANYCPKLTDIGFIDCLSVDELALGNVQSVRFLSVAGTPSMKWSVVTNLKLPNLIGLDVSRTDIGPSAVSRLLSSSPSLRVLIALNCPILEEETSFSASKYKNKLLISLSTDIFKGLASLFSDNTNRGKNVFLDWRTSKTYNDKGLDEIIPWLEWMLSHILLRSAESPQQGGLDNFWVEQGASLLLSLMQSSQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLGLAKSYREGLQSEAAKAIANLSVNANVAKAVAEEGGIEILASLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGVQALVDLIFKWSSTGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARHCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSAHEGVRQEAAGALWNLSFDDRNREAIAAAERAAGALWGLSVSEANSIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVAALVELCSSSVSKMARFMAALALAYMFDGRMDEFALVGTMSESVSKSVGLDGARRMALKHIEAFVRMFSNQQAFAAAASSSAPAALAQFTIPGGRHAVHHASLMQKAGAARVLRSAAAAATAPLEAKIFARIVLRNLEYHHIEHTV*