Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316850 | XP_003594205.1 | 92.623 | 122 | 8 | 1 | 1 | 122 | 2 | 122 | 6.13e-77 | 235 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316850 | sp|O82081|UCC1_ARATH | 34.483 | 116 | 72 | 2 | 6 | 121 | 8 | 119 | 8.61e-19 | 82.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000550 | Msa0316850 | -0.811107 | 8.259549e-51 | -8.615850e-47 |
Msa0008340 | Msa0316850 | 0.821017 | 5.050057e-53 | -8.615850e-47 |
Msa0011850 | Msa0316850 | 0.802341 | 5.873661e-49 | -8.615850e-47 |
Msa0012440 | Msa0316850 | 0.832665 | 8.305752e-56 | -8.615850e-47 |
Msa0016670 | Msa0316850 | 0.841803 | 3.807114e-58 | -8.615850e-47 |
Msa0017510 | Msa0316850 | 0.831780 | 1.374461e-55 | -8.615850e-47 |
Msa0024680 | Msa0316850 | 0.818447 | 1.950580e-52 | -8.615850e-47 |
Msa0029540 | Msa0316850 | -0.829376 | 5.329938e-55 | -8.615850e-47 |
Msa0030310 | Msa0316850 | 0.800641 | 1.310252e-48 | -8.615850e-47 |
Msa0032370 | Msa0316850 | 0.848876 | 4.633357e-60 | -8.615850e-47 |
Msa0036430 | Msa0316850 | 0.836371 | 9.730486e-57 | -8.615850e-47 |
Msa0044020 | Msa0316850 | 0.825471 | 4.603065e-54 | -8.615850e-47 |
Msa0050430 | Msa0316850 | 0.802547 | 5.326831e-49 | -8.615850e-47 |
Msa0050730 | Msa0316850 | 0.831565 | 1.553511e-55 | -8.615850e-47 |
Msa0050760 | Msa0316850 | 0.842292 | 2.826720e-58 | -8.615850e-47 |
Msa0057240 | Msa0316850 | 0.828613 | 8.155470e-55 | -8.615850e-47 |
Msa0069310 | Msa0316850 | 0.806907 | 6.549980e-50 | -8.615850e-47 |
Msa0072810 | Msa0316850 | 0.817675 | 2.915640e-52 | -8.615850e-47 |
Msa0076310 | Msa0316850 | 0.811341 | 7.350408e-51 | -8.615850e-47 |
Msa0084500 | Msa0316850 | 0.800806 | 1.212569e-48 | -8.615850e-47 |
Msa0094100 | Msa0316850 | 0.819394 | 1.188234e-52 | -8.615850e-47 |
Msa0095380 | Msa0316850 | 0.805983 | 1.025613e-49 | -8.615850e-47 |
Msa0102750 | Msa0316850 | 0.809181 | 2.148607e-50 | -8.615850e-47 |
Msa0103000 | Msa0316850 | 0.815475 | 9.072768e-52 | -8.615850e-47 |
Msa0105420 | Msa0316850 | 0.854666 | 1.057312e-61 | -8.615850e-47 |
Msa0110970 | Msa0316850 | 0.838228 | 3.258176e-57 | -8.615850e-47 |
Msa0113160 | Msa0316850 | 0.812865 | 3.419192e-51 | -8.615850e-47 |
Msa0114540 | Msa0316850 | -0.829808 | 4.184819e-55 | -8.615850e-47 |
Msa0120330 | Msa0316850 | 0.819670 | 1.028040e-52 | -8.615850e-47 |
Msa0124340 | Msa0316850 | 0.845821 | 3.197811e-59 | -8.615850e-47 |
Msa0127820 | Msa0316850 | 0.810503 | 1.115923e-50 | -8.615850e-47 |
Msa0130570 | Msa0316850 | 0.827046 | 1.941609e-54 | -8.615850e-47 |
Msa0138970 | Msa0316850 | -0.816657 | 4.939289e-52 | -8.615850e-47 |
Msa0140780 | Msa0316850 | 0.802903 | 4.497800e-49 | -8.615850e-47 |
Msa0141100 | Msa0316850 | 0.811039 | 8.543798e-51 | -8.615850e-47 |
Msa0148100 | Msa0316850 | 0.801708 | 7.926509e-49 | -8.615850e-47 |
Msa0149560 | Msa0316850 | 0.832047 | 1.181317e-55 | -8.615850e-47 |
Msa0157290 | Msa0316850 | 0.831433 | 1.673745e-55 | -8.615850e-47 |
Msa0168100 | Msa0316850 | 0.802020 | 6.840596e-49 | -8.615850e-47 |
Msa0169570 | Msa0316850 | 0.801247 | 9.852724e-49 | -8.615850e-47 |
Msa0172350 | Msa0316850 | 0.862356 | 5.369579e-64 | -8.615850e-47 |
Msa0185480 | Msa0316850 | 0.821790 | 3.347196e-53 | -8.615850e-47 |
Msa0185590 | Msa0316850 | 0.806690 | 7.276327e-50 | -8.615850e-47 |
Msa0186890 | Msa0316850 | 0.811541 | 6.650713e-51 | -8.615850e-47 |
Msa0188630 | Msa0316850 | 0.807576 | 4.725299e-50 | -8.615850e-47 |
Msa0191190 | Msa0316850 | 0.815087 | 1.106387e-51 | -8.615850e-47 |
Msa0191250 | Msa0316850 | 0.811730 | 6.048163e-51 | -8.615850e-47 |
Msa0193920 | Msa0316850 | 0.809124 | 2.208951e-50 | -8.615850e-47 |
Msa0196130 | Msa0316850 | -0.801647 | 8.159863e-49 | -8.615850e-47 |
Msa0197850 | Msa0316850 | 0.802136 | 6.473507e-49 | -8.615850e-47 |
Msa0199710 | Msa0316850 | 0.816713 | 4.798417e-52 | -8.615850e-47 |
Msa0205850 | Msa0316850 | 0.815100 | 1.099187e-51 | -8.615850e-47 |
Msa0208520 | Msa0316850 | 0.800102 | 1.687052e-48 | -8.615850e-47 |
Msa0208630 | Msa0316850 | 0.813744 | 2.192465e-51 | -8.615850e-47 |
Msa0217400 | Msa0316850 | 0.827155 | 1.828829e-54 | -8.615850e-47 |
Msa0219070 | Msa0316850 | 0.816227 | 6.166437e-52 | -8.615850e-47 |
Msa0219190 | Msa0316850 | 0.813920 | 2.004788e-51 | -8.615850e-47 |
Msa0222920 | Msa0316850 | 0.821506 | 3.894472e-53 | -8.615850e-47 |
Msa0227510 | Msa0316850 | 0.821767 | 3.388419e-53 | -8.615850e-47 |
Msa0230770 | Msa0316850 | 0.819030 | 1.438792e-52 | -8.615850e-47 |
Msa0235890 | Msa0316850 | 0.823956 | 1.047577e-53 | -8.615850e-47 |
Msa0239130 | Msa0316850 | 0.832374 | 9.805987e-56 | -8.615850e-47 |
Msa0239510 | Msa0316850 | 0.800297 | 1.539850e-48 | -8.615850e-47 |
Msa0243710 | Msa0316850 | 0.800356 | 1.497830e-48 | -8.615850e-47 |
Msa0244860 | Msa0316850 | 0.802189 | 6.312553e-49 | -8.615850e-47 |
Msa0246430 | Msa0316850 | 0.825252 | 5.188096e-54 | -8.615850e-47 |
Msa0248970 | Msa0316850 | 0.806119 | 9.604163e-50 | -8.615850e-47 |
Msa0257680 | Msa0316850 | 0.817996 | 2.468041e-52 | -8.615850e-47 |
Msa0258760 | Msa0316850 | 0.825551 | 4.407000e-54 | -8.615850e-47 |
Msa0260810 | Msa0316850 | 0.800103 | 1.685930e-48 | -8.615850e-47 |
Msa0264350 | Msa0316850 | 0.836389 | 9.627638e-57 | -8.615850e-47 |
Msa0265820 | Msa0316850 | 0.815767 | 7.808987e-52 | -8.615850e-47 |
Msa0267760 | Msa0316850 | 0.857864 | 1.220746e-62 | -8.615850e-47 |
Msa0270270 | Msa0316850 | 0.806858 | 6.706277e-50 | -8.615850e-47 |
Msa0274360 | Msa0316850 | 0.814342 | 1.617614e-51 | -8.615850e-47 |
Msa0276920 | Msa0316850 | 0.803228 | 3.852777e-49 | -8.615850e-47 |
Msa0280900 | Msa0316850 | 0.829132 | 6.106841e-55 | -8.615850e-47 |
Msa0282850 | Msa0316850 | 0.815056 | 1.123967e-51 | -8.615850e-47 |
Msa0283520 | Msa0316850 | 0.807042 | 6.130859e-50 | -8.615850e-47 |
Msa0287310 | Msa0316850 | 0.808512 | 2.987134e-50 | -8.615850e-47 |
Msa0287650 | Msa0316850 | 0.813753 | 2.182193e-51 | -8.615850e-47 |
Msa0296560 | Msa0316850 | 0.824564 | 7.536783e-54 | -8.615850e-47 |
Msa0296760 | Msa0316850 | 0.825959 | 3.526040e-54 | -8.615850e-47 |
Msa0299890 | Msa0316850 | 0.828256 | 9.947588e-55 | -8.615850e-47 |
Msa0302450 | Msa0316850 | 0.809195 | 2.133710e-50 | -8.615850e-47 |
Msa0306300 | Msa0316850 | 0.808168 | 3.536599e-50 | -8.615850e-47 |
Msa0311920 | Msa0316850 | 0.805938 | 1.048028e-49 | -8.615850e-47 |
Msa0313990 | Msa0316850 | 0.812842 | 3.459359e-51 | -8.615850e-47 |
Msa0314210 | Msa0316850 | 0.816108 | 6.552694e-52 | -8.615850e-47 |
Msa0315240 | Msa0316850 | 0.810587 | 1.070199e-50 | -8.615850e-47 |
Msa0316850 | Msa0317390 | 0.808868 | 2.506997e-50 | -8.615850e-47 |
Msa0316850 | Msa0319200 | 0.811272 | 7.605984e-51 | -8.615850e-47 |
Msa0316850 | Msa0320100 | 0.822468 | 2.330533e-53 | -8.615850e-47 |
Msa0316850 | Msa0323080 | 0.800539 | 1.374605e-48 | -8.615850e-47 |
Msa0316850 | Msa0325850 | 0.803436 | 3.489556e-49 | -8.615850e-47 |
Msa0316850 | Msa0334040 | 0.825348 | 4.923912e-54 | -8.615850e-47 |
Msa0316850 | Msa0334350 | 0.801570 | 8.461914e-49 | -8.615850e-47 |
Msa0316850 | Msa0335040 | 0.829939 | 3.887800e-55 | -8.615850e-47 |
Msa0316850 | Msa0335270 | 0.802148 | 6.437211e-49 | -8.615850e-47 |
Msa0316850 | Msa0343810 | 0.809865 | 1.532044e-50 | -8.615850e-47 |
Msa0316850 | Msa0362780 | 0.801599 | 8.344018e-49 | -8.615850e-47 |
Msa0316850 | Msa0369570 | 0.823273 | 1.513374e-53 | -8.615850e-47 |
Msa0316850 | Msa0371560 | 0.803553 | 3.300151e-49 | -8.615850e-47 |
Msa0316850 | Msa0374850 | 0.816689 | 4.859401e-52 | -8.615850e-47 |
Msa0316850 | Msa0375090 | 0.817547 | 3.115972e-52 | -8.615850e-47 |
Msa0316850 | Msa0392070 | 0.808590 | 2.874495e-50 | -8.615850e-47 |
Msa0316850 | Msa0393680 | 0.805080 | 1.586553e-49 | -8.615850e-47 |
Msa0316850 | Msa0393710 | 0.811974 | 5.351381e-51 | -8.615850e-47 |
Msa0316850 | Msa0393950 | 0.811658 | 6.269583e-51 | -8.615850e-47 |
Msa0316850 | Msa0398640 | 0.803704 | 3.070123e-49 | -8.615850e-47 |
Msa0316850 | Msa0414170 | 0.832497 | 9.140405e-56 | -8.615850e-47 |
Msa0316850 | Msa0414950 | -0.843945 | 1.025140e-58 | -8.615850e-47 |
Msa0316850 | Msa0415810 | 0.810800 | 9.624978e-51 | -8.615850e-47 |
Msa0316850 | Msa0419820 | 0.817565 | 3.086659e-52 | -8.615850e-47 |
Msa0316850 | Msa0423360 | -0.814386 | 1.582130e-51 | -8.615850e-47 |
Msa0316850 | Msa0426330 | 0.818335 | 2.067905e-52 | -8.615850e-47 |
Msa0316850 | Msa0436280 | -0.800531 | 1.379398e-48 | -8.615850e-47 |
Msa0316850 | Msa0436460 | 0.821760 | 3.401159e-53 | -8.615850e-47 |
Msa0316850 | Msa0437710 | 0.804033 | 2.622767e-49 | -8.615850e-47 |
Msa0316850 | Msa0442880 | 0.800070 | 1.712698e-48 | -8.615850e-47 |
Msa0316850 | Msa0449830 | 0.818841 | 1.587694e-52 | -8.615850e-47 |
Msa0316850 | Msa0452960 | 0.809845 | 1.547180e-50 | -8.615850e-47 |
Msa0316850 | Msa0461720 | 0.810200 | 1.297257e-50 | -8.615850e-47 |
Msa0316850 | Msa0466060 | 0.800311 | 1.529845e-48 | -8.615850e-47 |
Msa0316850 | Msa0470340 | 0.804506 | 2.090538e-49 | -8.615850e-47 |
Msa0316850 | Msa0480320 | 0.813378 | 2.638047e-51 | -8.615850e-47 |
Msa0316850 | Msa0484690 | 0.843212 | 1.610147e-58 | -8.615850e-47 |
Msa0316850 | Msa0484780 | 0.823021 | 1.733363e-53 | -8.615850e-47 |
Msa0316850 | Msa0490350 | 0.806943 | 6.435819e-50 | -8.615850e-47 |
Msa0316850 | Msa0506890 | 0.816872 | 4.419499e-52 | -8.615850e-47 |
Msa0316850 | Msa0508200 | 0.815647 | 8.305248e-52 | -8.615850e-47 |
Msa0316850 | Msa0509970 | 0.802571 | 5.267388e-49 | -8.615850e-47 |
Msa0316850 | Msa0516320 | 0.807814 | 4.205180e-50 | -8.615850e-47 |
Msa0316850 | Msa0521880 | 0.812423 | 4.271669e-51 | -8.615850e-47 |
Msa0316850 | Msa0526700 | 0.800192 | 1.617532e-48 | -8.615850e-47 |
Msa0316850 | Msa0526710 | 0.853881 | 1.781740e-61 | -8.615850e-47 |
Msa0316850 | Msa0534590 | 0.835143 | 1.992360e-56 | -8.615850e-47 |
Msa0316850 | Msa0535030 | 0.835676 | 1.460600e-56 | -8.615850e-47 |
Msa0316850 | Msa0535060 | 0.835461 | 1.655859e-56 | -8.615850e-47 |
Msa0316850 | Msa0535450 | 0.802053 | 6.733533e-49 | -8.615850e-47 |
Msa0316850 | Msa0541860 | 0.809825 | 1.562764e-50 | -8.615850e-47 |
Msa0316850 | Msa0546380 | 0.819034 | 1.435555e-52 | -8.615850e-47 |
Msa0316850 | Msa0548620 | 0.814747 | 1.316330e-51 | -8.615850e-47 |
Msa0316850 | Msa0548660 | 0.806474 | 8.083785e-50 | -8.615850e-47 |
Msa0316850 | Msa0555910 | 0.817521 | 3.159007e-52 | -8.615850e-47 |
Msa0316850 | Msa0568820 | 0.804768 | 1.843758e-49 | -8.615850e-47 |
Msa0316850 | Msa0590800 | 0.823825 | 1.124383e-53 | -8.615850e-47 |
Msa0316850 | Msa0591770 | 0.810640 | 1.042529e-50 | -8.615850e-47 |
Msa0316850 | Msa0607200 | 0.830178 | 3.399801e-55 | -8.615850e-47 |
Msa0316850 | Msa0609450 | 0.809896 | 1.508784e-50 | -8.615850e-47 |
Msa0316850 | Msa0610590 | 0.800957 | 1.129409e-48 | -8.615850e-47 |
Msa0316850 | Msa0619070 | 0.800956 | 1.130078e-48 | -8.615850e-47 |
Msa0316850 | Msa0619980 | 0.814903 | 1.215190e-51 | -8.615850e-47 |
Msa0316850 | Msa0620240 | 0.801337 | 9.444916e-49 | -8.615850e-47 |
Msa0316850 | Msa0620810 | 0.851138 | 1.078563e-60 | -8.615850e-47 |
Msa0316850 | Msa0621890 | 0.800749 | 1.245257e-48 | -8.615850e-47 |
Msa0316850 | Msa0631120 | 0.821361 | 4.206703e-53 | -8.615850e-47 |
Msa0316850 | Msa0638070 | 0.820496 | 6.651530e-53 | -8.615850e-47 |
Msa0316850 | Msa0638280 | 0.806802 | 6.893046e-50 | -8.615850e-47 |
Msa0316850 | Msa0638320 | 0.808056 | 3.734777e-50 | -8.615850e-47 |
Msa0316850 | Msa0647130 | 0.816995 | 4.148713e-52 | -8.615850e-47 |
Msa0316850 | Msa0669340 | 0.810611 | 1.057382e-50 | -8.615850e-47 |
Msa0316850 | Msa0669850 | 0.818352 | 2.050309e-52 | -8.615850e-47 |
Msa0316850 | Msa0670980 | 0.801509 | 8.705694e-49 | -8.615850e-47 |
Msa0316850 | Msa0677270 | 0.808203 | 3.476472e-50 | -8.615850e-47 |
Msa0316850 | Msa0677400 | 0.802657 | 5.056534e-49 | -8.615850e-47 |
Msa0316850 | Msa0684500 | 0.847604 | 1.040937e-59 | -8.615850e-47 |
Msa0316850 | Msa0692080 | 0.816179 | 6.319955e-52 | -8.615850e-47 |
Msa0316850 | Msa0693380 | 0.812298 | 4.547790e-51 | -8.615850e-47 |
Msa0316850 | Msa0703230 | 0.812788 | 3.553486e-51 | -8.615850e-47 |
Msa0316850 | Msa0706370 | 0.835811 | 1.350261e-56 | -8.615850e-47 |
Msa0316850 | Msa0716450 | 0.826086 | 3.290776e-54 | -8.615850e-47 |
Msa0316850 | Msa0741900 | 0.805039 | 1.617783e-49 | -8.615850e-47 |
Msa0316850 | Msa0743260 | 0.803416 | 3.523445e-49 | -8.615850e-47 |
Msa0316850 | Msa0754720 | -0.850901 | 1.257895e-60 | -8.615850e-47 |
Msa0316850 | Msa0756630 | -0.833167 | 6.229678e-56 | -8.615850e-47 |
Msa0316850 | Msa0757950 | 0.805434 | 1.337239e-49 | -8.615850e-47 |
Msa0316850 | Msa0780740 | 0.802559 | 5.297177e-49 | -8.615850e-47 |
Msa0316850 | Msa0789570 | 0.815356 | 9.642902e-52 | -8.615850e-47 |
Msa0316850 | Msa0799030 | 0.808833 | 2.549709e-50 | -8.615850e-47 |
Msa0316850 | Msa0810020 | 0.820161 | 7.938988e-53 | -8.615850e-47 |
Msa0316850 | Msa0810480 | 0.803368 | 3.604504e-49 | -8.615850e-47 |
Msa0316850 | Msa0812820 | 0.800052 | 1.726949e-48 | -8.615850e-47 |
Msa0316850 | Msa0822990 | 0.815574 | 8.623130e-52 | -8.615850e-47 |
Msa0316850 | Msa0824660 | 0.811118 | 8.213629e-51 | -8.615850e-47 |
Msa0316850 | Msa0829620 | 0.822311 | 2.535185e-53 | -8.615850e-47 |
Msa0316850 | Msa0837440 | 0.803741 | 3.015845e-49 | -8.615850e-47 |
Msa0316850 | Msa0844240 | 0.815097 | 1.100687e-51 | -8.615850e-47 |
Msa0316850 | Msa0850960 | 0.805167 | 1.520940e-49 | -8.615850e-47 |
Msa0316850 | Msa0853320 | 0.820949 | 5.233712e-53 | -8.615850e-47 |
Msa0316850 | Msa0862100 | 0.815421 | 9.323915e-52 | -8.615850e-47 |
Msa0316850 | Msa0867890 | 0.811633 | 6.350547e-51 | -8.615850e-47 |
Msa0316850 | Msa0870620 | 0.809895 | 1.509025e-50 | -8.615850e-47 |
Msa0316850 | Msa0871400 | 0.809000 | 2.348570e-50 | -8.615850e-47 |
Msa0316850 | Msa0872310 | 0.841512 | 4.543340e-58 | -8.615850e-47 |
Msa0316850 | Msa0878400 | 0.801828 | 7.490297e-49 | -8.615850e-47 |
Msa0316850 | Msa0880140 | 0.835453 | 1.663178e-56 | -8.615850e-47 |
Msa0316850 | Msa0880440 | 0.811099 | 8.294136e-51 | -8.615850e-47 |
Msa0316850 | Msa0893810 | 0.827123 | 1.861645e-54 | -8.615850e-47 |
Msa0316850 | Msa0894890 | 0.819030 | 1.438408e-52 | -8.615850e-47 |
Msa0316850 | Msa0896220 | 0.813007 | 3.182794e-51 | -8.615850e-47 |
Msa0316850 | Msa0905550 | 0.812183 | 4.818317e-51 | -8.615850e-47 |
Msa0316850 | Msa0907700 | 0.809445 | 1.885997e-50 | -8.615850e-47 |
Msa0316850 | Msa0908170 | 0.815208 | 1.039957e-51 | -8.615850e-47 |
Msa0316850 | Msa0910980 | -0.811428 | 7.037721e-51 | -8.615850e-47 |
Msa0316850 | Msa0922540 | 0.821025 | 5.026837e-53 | -8.615850e-47 |
Msa0316850 | Msa0930780 | 0.805439 | 1.334097e-49 | -8.615850e-47 |
Msa0316850 | Msa0933310 | 0.806841 | 6.760887e-50 | -8.615850e-47 |
Msa0316850 | Msa0933440 | 0.815879 | 7.371244e-52 | -8.615850e-47 |
Msa0316850 | Msa0936270 | 0.831877 | 1.301160e-55 | -8.615850e-47 |
Msa0316850 | Msa0944770 | 0.815305 | 9.897788e-52 | -8.615850e-47 |
Msa0316850 | Msa0946320 | 0.834088 | 3.669272e-56 | -8.615850e-47 |
Msa0316850 | Msa0966420 | 0.855351 | 6.686176e-62 | -8.615850e-47 |
Msa0316850 | Msa0971090 | 0.804869 | 1.756185e-49 | -8.615850e-47 |
Msa0316850 | Msa0981010 | 0.803773 | 2.970233e-49 | -8.615850e-47 |
Msa0316850 | Msa0993530 | 0.820143 | 8.013070e-53 | -8.615850e-47 |
Msa0316850 | Msa0996080 | 0.816055 | 6.736648e-52 | -8.615850e-47 |
Msa0316850 | Msa1002620 | 0.803311 | 3.704038e-49 | -8.615850e-47 |
Msa0316850 | Msa1009000 | 0.801047 | 1.082557e-48 | -8.615850e-47 |
Msa0316850 | Msa1012810 | 0.843518 | 1.334318e-58 | -8.615850e-47 |
Msa0316850 | Msa1014270 | 0.811590 | 6.488364e-51 | -8.615850e-47 |
Msa0316850 | Msa1018790 | 0.811403 | 7.125961e-51 | -8.615850e-47 |
Msa0316850 | Msa1019020 | 0.831451 | 1.657314e-55 | -8.615850e-47 |
Msa0316850 | Msa1033560 | 0.805665 | 1.196529e-49 | -8.615850e-47 |
Msa0316850 | Msa1037920 | 0.823108 | 1.653734e-53 | -8.615850e-47 |
Msa0316850 | Msa1040120 | 0.814860 | 1.242370e-51 | -8.615850e-47 |
Msa0316850 | Msa1054240 | 0.842321 | 2.777571e-58 | -8.615850e-47 |
Msa0316850 | Msa1055260 | 0.812372 | 4.383523e-51 | -8.615850e-47 |
Msa0316850 | Msa1055280 | 0.811290 | 7.537694e-51 | -8.615850e-47 |
Msa0316850 | Msa1055500 | 0.801610 | 8.302237e-49 | -8.615850e-47 |
Msa0316850 | Msa1063950 | 0.813490 | 2.493279e-51 | -8.615850e-47 |
Msa0316850 | Msa1082500 | 0.814722 | 1.332690e-51 | -8.615850e-47 |
Msa0316850 | Msa1082700 | 0.803445 | 3.474648e-49 | -8.615850e-47 |
Msa0316850 | Msa1087470 | 0.800437 | 1.442171e-48 | -8.615850e-47 |
Msa0316850 | Msa1094420 | 0.807454 | 5.014758e-50 | -8.615850e-47 |
Msa0316850 | Msa1097640 | 0.818308 | 2.097348e-52 | -8.615850e-47 |
Msa0316850 | Msa1097840 | 0.806554 | 7.774982e-50 | -8.615850e-47 |
Msa0316850 | Msa1098560 | 0.801221 | 9.976212e-49 | -8.615850e-47 |
Msa0316850 | Msa1104000 | 0.845657 | 3.542671e-59 | -8.615850e-47 |
Msa0316850 | Msa1106810 | 0.802897 | 4.511617e-49 | -8.615850e-47 |
Msa0316850 | Msa1111110 | 0.813108 | 3.024533e-51 | -8.615850e-47 |
Msa0316850 | Msa1127890 | 0.820205 | 7.758060e-53 | -8.615850e-47 |
Msa0316850 | Msa1129980 | 0.805084 | 1.583450e-49 | -8.615850e-47 |
Msa0316850 | Msa1130270 | -0.802640 | 5.097368e-49 | -8.615850e-47 |
Msa0316850 | Msa1139810 | 0.846415 | 2.203462e-59 | -8.615850e-47 |
Msa0316850 | Msa1147570 | 0.836965 | 6.869438e-57 | -8.615850e-47 |
Msa0316850 | Msa1170280 | 0.817329 | 3.488987e-52 | -8.615850e-47 |
Msa0316850 | Msa1172670 | 0.821413 | 4.091297e-53 | -8.615850e-47 |
Msa0316850 | Msa1185540 | 0.812567 | 3.973041e-51 | -8.615850e-47 |
Msa0316850 | Msa1187840 | 0.806512 | 7.934571e-50 | -8.615850e-47 |
Msa0316850 | Msa1197590 | 0.810401 | 1.174074e-50 | -8.615850e-47 |
Msa0316850 | Msa1217860 | 0.817975 | 2.495360e-52 | -8.615850e-47 |
Msa0316850 | Msa1218960 | 0.813124 | 2.999353e-51 | -8.615850e-47 |
Msa0316850 | Msa1220230 | 0.808394 | 3.165410e-50 | -8.615850e-47 |
Msa0316850 | Msa1233890 | 0.811589 | 6.491265e-51 | -8.615850e-47 |
Msa0316850 | Msa1242220 | 0.801792 | 7.616381e-49 | -8.615850e-47 |
Msa0316850 | Msa1242230 | 0.801335 | 9.451658e-49 | -8.615850e-47 |
Msa0316850 | Msa1242240 | 0.800331 | 1.515593e-48 | -8.615850e-47 |
Msa0316850 | Msa1243010 | 0.807744 | 4.352258e-50 | -8.615850e-47 |
Msa0316850 | Msa1243040 | 0.813288 | 2.761361e-51 | -8.615850e-47 |
Msa0316850 | Msa1249870 | 0.800048 | 1.730008e-48 | -8.615850e-47 |
Msa0316850 | Msa1260040 | 0.800455 | 1.429432e-48 | -8.615850e-47 |
Msa0316850 | Msa1264020 | 0.816852 | 4.465368e-52 | -8.615850e-47 |
Msa0316850 | Msa1269080 | 0.800660 | 1.298840e-48 | -8.615850e-47 |
Msa0316850 | Msa1278840 | 0.809197 | 2.131013e-50 | -8.615850e-47 |
Msa0316850 | Msa1283840 | 0.802962 | 4.373672e-49 | -8.615850e-47 |
Msa0316850 | Msa1284260 | 0.809999 | 1.433092e-50 | -8.615850e-47 |
Msa0316850 | Msa1297090 | 0.806743 | 7.092587e-50 | -8.615850e-47 |
Msa0316850 | Msa1316830 | 0.803898 | 2.797742e-49 | -8.615850e-47 |
Msa0316850 | Msa1318240 | 0.817662 | 2.935845e-52 | -8.615850e-47 |
Msa0316850 | Msa1319650 | 0.801360 | 9.341417e-49 | -8.615850e-47 |
Msa0316850 | Msa1322860 | 0.811696 | 6.153809e-51 | -8.615850e-47 |
Msa0316850 | Msa1322890 | 0.801395 | 9.187528e-49 | -8.615850e-47 |
Msa0316850 | Msa1323190 | 0.822430 | 2.379133e-53 | -8.615850e-47 |
Msa0316850 | Msa1327050 | 0.816275 | 6.015650e-52 | -8.615850e-47 |
Msa0316850 | Msa1329920 | 0.800659 | 1.299056e-48 | -8.615850e-47 |
Msa0316850 | Msa1343070 | 0.811635 | 6.342298e-51 | -8.615850e-47 |
Msa0316850 | Msa1343820 | 0.826359 | 2.833620e-54 | -8.615850e-47 |
Msa0316850 | Msa1348360 | 0.806070 | 9.834329e-50 | -8.615850e-47 |
Msa0316850 | Msa1351450 | 0.813146 | 2.966704e-51 | -8.615850e-47 |
Msa0316850 | Msa1358040 | 0.801408 | 9.134239e-49 | -8.615850e-47 |
Msa0316850 | Msa1362510 | 0.809831 | 1.558024e-50 | -8.615850e-47 |
Msa0316850 | Msa1363890 | 0.828476 | 8.800112e-55 | -8.615850e-47 |
Msa0316850 | Msa1373330 | 0.820361 | 7.142742e-53 | -8.615850e-47 |
Msa0316850 | Msa1374440 | 0.839990 | 1.138330e-57 | -8.615850e-47 |
Msa0316850 | Msa1379990 | 0.819903 | 9.094042e-53 | -8.615850e-47 |
Msa0316850 | Msa1390310 | 0.854849 | 9.357185e-62 | -8.615850e-47 |
Msa0316850 | Msa1404540 | 0.811467 | 6.899248e-51 | -8.615850e-47 |
Msa0316850 | Msa1408790 | 0.807453 | 5.018117e-50 | -8.615850e-47 |
Msa0316850 | Msa1414740 | 0.804637 | 1.963226e-49 | -8.615850e-47 |
Msa0316850 | Msa1419110 | 0.800535 | 1.376911e-48 | -8.615850e-47 |
Msa0316850 | Msa1420060 | 0.818897 | 1.542309e-52 | -8.615850e-47 |
Msa0316850 | Msa1422270 | 0.844769 | 6.157131e-59 | -8.615850e-47 |
Msa0316850 | Msa1423450 | 0.815392 | 9.463459e-52 | -8.615850e-47 |
Msa0316850 | Msa1427760 | 0.825169 | 5.426978e-54 | -8.615850e-47 |
Msa0316850 | Msa1429420 | 0.840894 | 6.604787e-58 | -8.615850e-47 |
Msa0316850 | Msa1431060 | 0.805967 | 1.033485e-49 | -8.615850e-47 |
Msa0316850 | Msa1436040 | 0.805159 | 1.527528e-49 | -8.615850e-47 |
Msa0316850 | Msa1438740 | 0.807578 | 4.721427e-50 | -8.615850e-47 |
Msa0316850 | Msa1439230 | 0.802678 | 5.005100e-49 | -8.615850e-47 |
Msa0316850 | Msa1439960 | 0.814768 | 1.302282e-51 | -8.615850e-47 |
Msa0316850 | Msa1440600 | 0.842249 | 2.901878e-58 | -8.615850e-47 |
Msa0316850 | Msa1452120 | 0.803960 | 2.716307e-49 | -8.615850e-47 |
Msa0316850 | Msa1466460 | 0.826520 | 2.593607e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316850 | MtrunA17_Chr2g0289741 | 92.623 | 122 | 8 | 1 | 1 | 122 | 2 | 122 | 5.64e-81 | 235 |
Msa0316850 | MtrunA17_Chr6g0459441 | 39.175 | 97 | 58 | 1 | 25 | 121 | 24 | 119 | 2.14e-23 | 89.4 |
Msa0316850 | MtrunA17_Chr2g0323021 | 39.091 | 110 | 63 | 4 | 14 | 122 | 13 | 119 | 5.50e-22 | 86.7 |
Msa0316850 | MtrunA17_Chr3g0132511 | 37.273 | 110 | 67 | 2 | 14 | 122 | 13 | 121 | 3.10e-18 | 76.6 |
Msa0316850 | MtrunA17_Chr3g0132441 | 36.752 | 117 | 70 | 3 | 6 | 122 | 7 | 119 | 4.11e-18 | 75.9 |
Msa0316850 | MtrunA17_Chr8g0360371 | 35.088 | 114 | 70 | 3 | 11 | 121 | 7 | 119 | 9.48e-18 | 76.6 |
Msa0316850 | MtrunA17_Chr3g0132701 | 37.273 | 110 | 67 | 2 | 14 | 122 | 13 | 121 | 1.04e-17 | 75.5 |
Msa0316850 | MtrunA17_Chr1g0196801 | 33.333 | 102 | 66 | 2 | 20 | 121 | 16 | 115 | 2.83e-17 | 73.2 |
Msa0316850 | MtrunA17_Chr3g0132431 | 35.780 | 109 | 68 | 2 | 14 | 122 | 13 | 119 | 2.90e-17 | 73.6 |
Msa0316850 | MtrunA17_Chr6g0481491 | 34.821 | 112 | 71 | 2 | 11 | 122 | 12 | 121 | 2.95e-16 | 71.2 |
Msa0316850 | MtrunA17_Chr8g0335571 | 34.677 | 124 | 74 | 4 | 1 | 122 | 1 | 119 | 6.37e-15 | 67.8 |
Msa0316850 | MtrunA17_Chr8g0335531 | 34.783 | 115 | 64 | 4 | 11 | 121 | 11 | 118 | 1.70e-14 | 66.2 |
Msa0316850 | MtrunA17_Chr8g0385021 | 32.759 | 116 | 73 | 3 | 10 | 121 | 6 | 120 | 3.27e-14 | 66.6 |
Msa0316850 | MtrunA17_Chr3g0132411 | 31.967 | 122 | 81 | 2 | 1 | 122 | 39 | 158 | 3.28e-14 | 65.1 |
Msa0316850 | MtrunA17_Chr4g0041811 | 31.818 | 110 | 70 | 2 | 16 | 121 | 21 | 129 | 3.31e-14 | 66.2 |
Msa0316850 | MtrunA17_Chr2g0324721 | 35.484 | 93 | 57 | 2 | 29 | 119 | 29 | 120 | 3.36e-14 | 65.9 |
Msa0316850 | MtrunA17_Chr4g0040291 | 35.417 | 96 | 59 | 2 | 29 | 122 | 27 | 121 | 4.43e-14 | 65.1 |
Msa0316850 | MtrunA17_Chr2g0324711 | 34.167 | 120 | 74 | 3 | 6 | 121 | 2 | 120 | 4.95e-14 | 67.0 |
Msa0316850 | MtrunA17_Chr2g0331181 | 32.203 | 118 | 72 | 3 | 10 | 122 | 10 | 124 | 5.33e-14 | 65.1 |
Msa0316850 | MtrunA17_Chr2g0319611 | 37.113 | 97 | 56 | 2 | 28 | 119 | 27 | 123 | 6.39e-14 | 65.9 |
Msa0316850 | MtrunA17_Chr1g0150131 | 31.452 | 124 | 79 | 4 | 3 | 121 | 1 | 123 | 1.05e-13 | 63.9 |
Msa0316850 | MtrunA17_Chr8g0387804 | 31.092 | 119 | 73 | 4 | 7 | 122 | 14 | 126 | 1.23e-13 | 62.8 |
Msa0316850 | MtrunA17_Chr6g0453921 | 33.613 | 119 | 72 | 4 | 6 | 122 | 20 | 133 | 1.46e-13 | 63.5 |
Msa0316850 | MtrunA17_Chr5g0440711 | 31.579 | 114 | 76 | 2 | 10 | 122 | 13 | 125 | 7.50e-13 | 61.2 |
Msa0316850 | MtrunA17_Chr7g0253761 | 28.571 | 112 | 79 | 1 | 10 | 121 | 9 | 119 | 1.23e-12 | 61.2 |
Msa0316850 | MtrunA17_Chr8g0385031 | 31.897 | 116 | 74 | 3 | 10 | 121 | 6 | 120 | 1.24e-12 | 62.8 |
Msa0316850 | MtrunA17_Chr7g0253641 | 29.464 | 112 | 78 | 1 | 10 | 121 | 9 | 119 | 1.83e-12 | 61.6 |
Msa0316850 | MtrunA17_Chr1g0205701 | 31.624 | 117 | 75 | 4 | 9 | 122 | 7 | 121 | 2.45e-12 | 60.5 |
Msa0316850 | MtrunA17_Chr4g0064041 | 29.032 | 124 | 83 | 2 | 2 | 121 | 4 | 126 | 7.51e-12 | 60.8 |
Msa0316850 | MtrunA17_Chr7g0253631 | 28.696 | 115 | 81 | 1 | 7 | 121 | 6 | 119 | 2.38e-11 | 58.5 |
Msa0316850 | MtrunA17_Chr8g0380901 | 31.356 | 118 | 73 | 4 | 9 | 122 | 6 | 119 | 3.84e-11 | 56.2 |
Msa0316850 | MtrunA17_Chr7g0253681 | 28.704 | 108 | 74 | 2 | 8 | 113 | 6 | 112 | 4.12e-11 | 57.0 |
Msa0316850 | MtrunA17_Chr7g0253701 | 32.184 | 87 | 58 | 1 | 27 | 113 | 26 | 111 | 4.27e-11 | 57.0 |
Msa0316850 | MtrunA17_Chr7g0253671 | 32.184 | 87 | 58 | 1 | 27 | 113 | 26 | 111 | 4.27e-11 | 57.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316850 | AT3G27200.1 | 36.066 | 122 | 74 | 3 | 1 | 121 | 1 | 119 | 3.56e-21 | 83.6 |
Msa0316850 | AT2G32300.1 | 34.483 | 116 | 72 | 2 | 6 | 121 | 8 | 119 | 8.76e-20 | 82.0 |
Msa0316850 | AT2G32300.2 | 34.483 | 116 | 72 | 2 | 6 | 121 | 38 | 149 | 1.37e-19 | 82.0 |
Msa0316850 | AT5G07475.1 | 36.975 | 119 | 65 | 4 | 6 | 122 | 15 | 125 | 1.88e-18 | 77.0 |
Msa0316850 | AT2G26720.1 | 33.051 | 118 | 77 | 2 | 6 | 122 | 8 | 124 | 3.77e-16 | 71.2 |
Msa0316850 | AT4G27520.1 | 40.000 | 95 | 54 | 2 | 29 | 121 | 33 | 126 | 6.38e-16 | 72.4 |
Msa0316850 | AT4G30590.1 | 33.846 | 130 | 68 | 5 | 5 | 121 | 2 | 126 | 1.34e-15 | 69.7 |
Msa0316850 | AT3G17675.1 | 31.034 | 116 | 78 | 2 | 6 | 121 | 12 | 125 | 1.18e-14 | 65.9 |
Msa0316850 | AT4G31840.1 | 32.540 | 126 | 79 | 4 | 1 | 121 | 1 | 125 | 1.34e-14 | 66.6 |
Msa0316850 | AT2G25060.1 | 34.454 | 119 | 70 | 5 | 8 | 121 | 14 | 129 | 1.89e-14 | 66.2 |
Msa0316850 | AT3G20570.1 | 33.929 | 112 | 69 | 5 | 11 | 119 | 15 | 124 | 1.93e-14 | 66.6 |
Msa0316850 | AT5G53870.1 | 31.579 | 95 | 62 | 2 | 29 | 121 | 32 | 125 | 4.42e-14 | 67.4 |
Msa0316850 | AT4G12880.1 | 33.043 | 115 | 70 | 4 | 12 | 121 | 11 | 123 | 6.57e-14 | 63.9 |
Msa0316850 | AT4G28365.1 | 35.417 | 96 | 59 | 2 | 29 | 122 | 31 | 125 | 8.40e-14 | 65.1 |
Msa0316850 | AT5G53870.2 | 31.183 | 93 | 61 | 2 | 29 | 119 | 32 | 123 | 2.14e-12 | 62.8 |
Msa0316850 | AT4G32490.1 | 29.839 | 124 | 83 | 3 | 1 | 121 | 4 | 126 | 2.29e-12 | 61.6 |
Msa0316850 | AT3G60280.1 | 33.333 | 93 | 60 | 1 | 29 | 121 | 26 | 116 | 2.96e-12 | 61.2 |
Msa0316850 | AT1G17800.1 | 31.496 | 127 | 73 | 4 | 8 | 122 | 11 | 135 | 3.00e-12 | 59.7 |
Msa0316850 | AT1G72230.1 | 33.043 | 115 | 71 | 3 | 7 | 121 | 7 | 115 | 4.21e-12 | 60.1 |
Msa0316850 | AT1G45063.1 | 36.842 | 95 | 58 | 2 | 29 | 121 | 151 | 245 | 6.48e-12 | 61.2 |
Msa0316850 | AT3G60270.1 | 31.373 | 102 | 68 | 1 | 21 | 122 | 20 | 119 | 9.10e-12 | 59.3 |
Msa0316850 | AT1G45063.2 | 37.975 | 79 | 49 | 0 | 43 | 121 | 167 | 245 | 1.19e-11 | 60.1 |
Msa0316850 | AT1G45063.2 | 28.333 | 120 | 84 | 2 | 3 | 121 | 6 | 124 | 6.92e-11 | 58.2 |
Msa0316850 | AT5G25090.1 | 25.600 | 125 | 88 | 2 | 1 | 121 | 1 | 124 | 1.88e-11 | 58.5 |
Msa0316850 | AT5G57920.1 | 35.897 | 78 | 49 | 1 | 44 | 121 | 45 | 121 | 1.95e-11 | 58.5 |
Msa0316850 | AT5G57920.2 | 35.897 | 78 | 49 | 1 | 44 | 121 | 44 | 120 | 2.39e-11 | 58.2 |
Msa0316850 | AT5G57920.3 | 35.897 | 78 | 49 | 1 | 44 | 121 | 77 | 153 | 3.38e-11 | 58.2 |
Msa0316850 | AT3G53330.1 | 35.897 | 78 | 50 | 0 | 44 | 121 | 207 | 284 | 9.15e-11 | 57.8 |
Find 39 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTCTTCTGGAAGGGTCTTC+AGG | 0.183157 | 2_4:-14148912 | Msa0316850:CDS |
GATATCTTATCTTGGTCTTC+TGG | 0.246012 | 2_4:-14148925 | Msa0316850:CDS |
CCTTCAGTGTACATCTTGAT+AGG | 0.277915 | 2_4:+14147878 | None:intergenic |
GTCTTCTGGAAGGGTCTTCA+GGG | 0.324887 | 2_4:-14148911 | Msa0316850:CDS |
CAAGATAAGATATCTGAGTT+TGG | 0.386736 | 2_4:+14148934 | None:intergenic |
TGGTGGTTAGTATGTGTATA+TGG | 0.401517 | 2_4:+14149093 | None:intergenic |
TGTTGTGGTGGCTATGATCA+TGG | 0.446485 | 2_4:-14149010 | Msa0316850:CDS |
TCTGGAAGGGTCTTCAGGGT+TGG | 0.446855 | 2_4:-14148907 | Msa0316850:CDS |
TATTGTTGGTGTTATTGTTG+TGG | 0.450722 | 2_4:-14149025 | Msa0316850:CDS |
CAAACTCAGATATCTTATCT+TGG | 0.452486 | 2_4:-14148933 | Msa0316850:CDS |
TCTTATCTTGGTCTTCTGGA+AGG | 0.465478 | 2_4:-14148921 | Msa0316850:CDS |
AGTAGAGTTAATAGAAGTAA+CGG | 0.479685 | 2_4:+14149124 | None:intergenic |
CTTATTCCTTCCTTCTCAAG+TGG | 0.483668 | 2_4:+14147842 | None:intergenic |
GACTCTGAGAATTGCAAGAA+TGG | 0.490223 | 2_4:-14147803 | Msa0316850:CDS |
AAGGAAAGAAAAGTGGTTGT+TGG | 0.496166 | 2_4:-14149205 | Msa0316850:five_prime_UTR |
CATGTGGTGGGAGGAGATCA+TGG | 0.500069 | 2_4:-14148964 | Msa0316850:CDS |
CTTATCTTGGTCTTCTGGAA+GGG | 0.509677 | 2_4:-14148920 | Msa0316850:CDS |
TGTTGGTGTTATTGTTGTGG+TGG | 0.528689 | 2_4:-14149022 | Msa0316850:CDS |
TGGTGGGAGGAGATCATGGA+TGG | 0.532106 | 2_4:-14148960 | Msa0316850:CDS |
TTATTCCTTCCTTCTCAAGT+GGG | 0.533743 | 2_4:+14147843 | None:intergenic |
CTTCAGTGTACATCTTGATA+GGG | 0.537862 | 2_4:+14147879 | None:intergenic |
GGTGATGAAGGAAAGAAAAG+TGG | 0.538846 | 2_4:-14149212 | Msa0316850:five_prime_UTR |
AATATGGGAGGGATTATTGT+TGG | 0.542239 | 2_4:-14149039 | Msa0316850:CDS |
ACATACAATCCCACTTGAGA+AGG | 0.548716 | 2_4:-14147852 | Msa0316850:CDS |
TATACTAATGAAGATGAAGA+TGG | 0.573928 | 2_4:+14149070 | None:intergenic |
AGCACAAGGATTAGTTGCAG+AGG | 0.587702 | 2_4:-14147942 | Msa0316850:CDS |
TGGTCTCAAACTCAATGTTG+AGG | 0.612269 | 2_4:-14147783 | None:intergenic |
ACAATCCCACTTGAGAAGGA+AGG | 0.616800 | 2_4:-14147848 | Msa0316850:CDS |
AAGTGAGGTACATCATGTGG+TGG | 0.620896 | 2_4:-14148977 | Msa0316850:CDS |
TTTGCGTACTCAGCAGCACA+AGG | 0.622683 | 2_4:-14147956 | Msa0316850:CDS |
GGTGGCTATGATCATGGATG+TGG | 0.628192 | 2_4:-14149004 | Msa0316850:CDS |
CCTATCAAGATGTACACTGA+AGG | 0.642758 | 2_4:-14147878 | Msa0316850:CDS |
AATGAAGATGAAGATGGTGG+TGG | 0.643513 | 2_4:+14149076 | None:intergenic |
GAGGTACATCATGTGGTGGG+AGG | 0.644833 | 2_4:-14148973 | Msa0316850:CDS |
AGTGAGGTACATCATGTGGT+GGG | 0.661400 | 2_4:-14148976 | Msa0316850:CDS |
AACAAGTGAGGTACATCATG+TGG | 0.692455 | 2_4:-14148980 | Msa0316850:CDS |
GGTGGGAGGAGATCATGGAT+GGG | 0.702174 | 2_4:-14148959 | Msa0316850:CDS |
CATGGATGTGGCAACAAGTG+AGG | 0.703901 | 2_4:-14148992 | Msa0316850:CDS |
ACTAATGAAGATGAAGATGG+TGG | 0.716684 | 2_4:+14149073 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATTTTATTTTATTAA+AGG | + | chr2_4:14148501-14148520 | None:intergenic | 0.0% |
!!! | ATTTTATTTTATTTTATTAA+AGG | + | chr2_4:14148501-14148520 | None:intergenic | 0.0% |
!!! | TTGTTTTATACAAAAAATTT+AGG | - | chr2_4:14148310-14148329 | Msa0316850:intron | 10.0% |
!!! | TATTTTATTATATTTTTGAC+AGG | + | chr2_4:14148559-14148578 | None:intergenic | 10.0% |
!!! | ATAATATTATTACTTTTTGT+TGG | + | chr2_4:14148653-14148672 | None:intergenic | 10.0% |
!!! | TTGTTTTATACAAAAAATTT+AGG | - | chr2_4:14148310-14148329 | Msa0316850:intron | 10.0% |
!!! | TATTTTATTATATTTTTGAC+AGG | + | chr2_4:14148559-14148578 | None:intergenic | 10.0% |
!!! | ATAATATTATTACTTTTTGT+TGG | + | chr2_4:14148653-14148672 | None:intergenic | 10.0% |
!! | TTAGTATAGAAAAATGAATA+TGG | - | chr2_4:14147947-14147966 | Msa0316850:CDS | 15.0% |
!! | TAGTATAGAAAAATGAATAT+GGG | - | chr2_4:14147948-14147967 | Msa0316850:CDS | 15.0% |
!! | TTTACATATTTATTCTTGAA+CGG | + | chr2_4:14148526-14148545 | None:intergenic | 15.0% |
!!! | ATGACAAACATTTTATTTAT+GGG | - | chr2_4:14149018-14149037 | Msa0316850:CDS | 15.0% |
!! | TTAGTATAGAAAAATGAATA+TGG | - | chr2_4:14147947-14147966 | Msa0316850:CDS | 15.0% |
!! | TAGTATAGAAAAATGAATAT+GGG | - | chr2_4:14147948-14147967 | Msa0316850:CDS | 15.0% |
!! | TTTACATATTTATTCTTGAA+CGG | + | chr2_4:14148526-14148545 | None:intergenic | 15.0% |
!!! | ATGACAAACATTTTATTTAT+GGG | - | chr2_4:14149018-14149037 | Msa0316850:CDS | 15.0% |
!!! | ATAATTTTTTTTGCTGAGAA+TGG | + | chr2_4:14147829-14147848 | None:intergenic | 20.0% |
!! | AAGAAAAAGACATACATATT+TGG | + | chr2_4:14148124-14148143 | None:intergenic | 20.0% |
!! | ATGAAACTTACATGATTAAA+GGG | + | chr2_4:14148198-14148217 | None:intergenic | 20.0% |
!!! | AAAACAGCATATTTTATGAA+AGG | + | chr2_4:14148225-14148244 | None:intergenic | 20.0% |
!!! | TATACAAAAAATTTAGGATG+AGG | - | chr2_4:14148316-14148335 | Msa0316850:intron | 20.0% |
!! | ATTGATTATTACCAATTGAT+TGG | - | chr2_4:14148445-14148464 | Msa0316850:intron | 20.0% |
!! | AGAAAAATCTATCTATTCTA+TGG | + | chr2_4:14148733-14148752 | None:intergenic | 20.0% |
!!! | AAGTGAAATTCAATTTGTTT+TGG | - | chr2_4:14148764-14148783 | Msa0316850:intron | 20.0% |
!! | ATGTAAATTCTTAAAGAAGT+TGG | - | chr2_4:14148903-14148922 | Msa0316850:CDS | 20.0% |
!! | AGAAAAAGTTTAGATTAAGA+GGG | + | chr2_4:14148957-14148976 | None:intergenic | 20.0% |
!!! | GATGACAAACATTTTATTTA+TGG | - | chr2_4:14149017-14149036 | Msa0316850:CDS | 20.0% |
!!! | ATAATTTTTTTTGCTGAGAA+TGG | + | chr2_4:14147829-14147848 | None:intergenic | 20.0% |
!! | AAGAAAAAGACATACATATT+TGG | + | chr2_4:14148124-14148143 | None:intergenic | 20.0% |
!! | ATGAAACTTACATGATTAAA+GGG | + | chr2_4:14148198-14148217 | None:intergenic | 20.0% |
!!! | AAAACAGCATATTTTATGAA+AGG | + | chr2_4:14148225-14148244 | None:intergenic | 20.0% |
!!! | TATACAAAAAATTTAGGATG+AGG | - | chr2_4:14148316-14148335 | Msa0316850:intron | 20.0% |
!! | ATTGATTATTACCAATTGAT+TGG | - | chr2_4:14148445-14148464 | Msa0316850:intron | 20.0% |
!! | AGAAAAATCTATCTATTCTA+TGG | + | chr2_4:14148733-14148752 | None:intergenic | 20.0% |
!!! | AAGTGAAATTCAATTTGTTT+TGG | - | chr2_4:14148764-14148783 | Msa0316850:intron | 20.0% |
!! | ATGTAAATTCTTAAAGAAGT+TGG | - | chr2_4:14148903-14148922 | Msa0316850:CDS | 20.0% |
!! | AGAAAAAGTTTAGATTAAGA+GGG | + | chr2_4:14148957-14148976 | None:intergenic | 20.0% |
!!! | GATGACAAACATTTTATTTA+TGG | - | chr2_4:14149017-14149036 | Msa0316850:CDS | 20.0% |
! | AGTAGAGTTAATAGAAGTAA+CGG | + | chr2_4:14147881-14147900 | None:intergenic | 25.0% |
! | TATACTAATGAAGATGAAGA+TGG | + | chr2_4:14147935-14147954 | None:intergenic | 25.0% |
! | TATAGAAAAATGAATATGGG+AGG | - | chr2_4:14147951-14147970 | Msa0316850:CDS | 25.0% |
! | ATAGAAAAATGAATATGGGA+GGG | - | chr2_4:14147952-14147971 | Msa0316850:CDS | 25.0% |
! | CATGAAACTTACATGATTAA+AGG | + | chr2_4:14148199-14148218 | None:intergenic | 25.0% |
! | TAGATTCAAAATGGAATGAT+TGG | - | chr2_4:14148272-14148291 | Msa0316850:intron | 25.0% |
!! | AAAAAATTTAGGATGAGGAA+TGG | - | chr2_4:14148321-14148340 | Msa0316850:intron | 25.0% |
! | ATTATAGACATCCAATCAAT+TGG | + | chr2_4:14148459-14148478 | None:intergenic | 25.0% |
! | TAAATTCTTAAAGAAGTTGG+TGG | - | chr2_4:14148906-14148925 | Msa0316850:CDS | 25.0% |
! | GAGAAAAAGTTTAGATTAAG+AGG | + | chr2_4:14148958-14148977 | None:intergenic | 25.0% |
!!! | AAACATTTTATTTATGGGCA+GGG | - | chr2_4:14149023-14149042 | Msa0316850:CDS | 25.0% |
! | AGTAGAGTTAATAGAAGTAA+CGG | + | chr2_4:14147881-14147900 | None:intergenic | 25.0% |
! | TATACTAATGAAGATGAAGA+TGG | + | chr2_4:14147935-14147954 | None:intergenic | 25.0% |
! | TATAGAAAAATGAATATGGG+AGG | - | chr2_4:14147951-14147970 | Msa0316850:CDS | 25.0% |
! | ATAGAAAAATGAATATGGGA+GGG | - | chr2_4:14147952-14147971 | Msa0316850:CDS | 25.0% |
! | CATGAAACTTACATGATTAA+AGG | + | chr2_4:14148199-14148218 | None:intergenic | 25.0% |
! | TAGATTCAAAATGGAATGAT+TGG | - | chr2_4:14148272-14148291 | Msa0316850:intron | 25.0% |
!! | AAAAAATTTAGGATGAGGAA+TGG | - | chr2_4:14148321-14148340 | Msa0316850:intron | 25.0% |
! | ATTATAGACATCCAATCAAT+TGG | + | chr2_4:14148459-14148478 | None:intergenic | 25.0% |
! | TAAATTCTTAAAGAAGTTGG+TGG | - | chr2_4:14148906-14148925 | Msa0316850:CDS | 25.0% |
! | GAGAAAAAGTTTAGATTAAG+AGG | + | chr2_4:14148958-14148977 | None:intergenic | 25.0% |
!!! | AAACATTTTATTTATGGGCA+GGG | - | chr2_4:14149023-14149042 | Msa0316850:CDS | 25.0% |
!! | TATTGTTGGTGTTATTGTTG+TGG | - | chr2_4:14147977-14147996 | Msa0316850:intron | 30.0% |
CAAGATAAGATATCTGAGTT+TGG | + | chr2_4:14148071-14148090 | None:intergenic | 30.0% | |
CAAACTCAGATATCTTATCT+TGG | - | chr2_4:14148069-14148088 | Msa0316850:intron | 30.0% | |
AACTTACATGATTAAAGGGT+GGG | + | chr2_4:14148194-14148213 | None:intergenic | 30.0% | |
AAACTTACATGATTAAAGGG+TGG | + | chr2_4:14148195-14148214 | None:intergenic | 30.0% | |
ATTCAAAATGGAATGATTGG+AGG | - | chr2_4:14148275-14148294 | Msa0316850:intron | 30.0% | |
TTGGATGTCTATAATGAGAA+AGG | - | chr2_4:14148464-14148483 | Msa0316850:intron | 30.0% | |
TAATGAGAAAGGAGAAATAG+AGG | - | chr2_4:14148475-14148494 | Msa0316850:intron | 30.0% | |
!! | CAAACATTTTATTTATGGGC+AGG | - | chr2_4:14149022-14149041 | Msa0316850:CDS | 30.0% |
!! | TATTGTTGGTGTTATTGTTG+TGG | - | chr2_4:14147977-14147996 | Msa0316850:intron | 30.0% |
CAAGATAAGATATCTGAGTT+TGG | + | chr2_4:14148071-14148090 | None:intergenic | 30.0% | |
CAAACTCAGATATCTTATCT+TGG | - | chr2_4:14148069-14148088 | Msa0316850:intron | 30.0% | |
AACTTACATGATTAAAGGGT+GGG | + | chr2_4:14148194-14148213 | None:intergenic | 30.0% | |
AAACTTACATGATTAAAGGG+TGG | + | chr2_4:14148195-14148214 | None:intergenic | 30.0% | |
ATTCAAAATGGAATGATTGG+AGG | - | chr2_4:14148275-14148294 | Msa0316850:intron | 30.0% | |
TTGGATGTCTATAATGAGAA+AGG | - | chr2_4:14148464-14148483 | Msa0316850:intron | 30.0% | |
TAATGAGAAAGGAGAAATAG+AGG | - | chr2_4:14148475-14148494 | Msa0316850:intron | 30.0% | |
!! | CAAACATTTTATTTATGGGC+AGG | - | chr2_4:14149022-14149041 | Msa0316850:CDS | 30.0% |
AAGGAAAGAAAAGTGGTTGT+TGG | - | chr2_4:14147797-14147816 | Msa0316850:CDS | 35.0% | |
TGGTGGTTAGTATGTGTATA+TGG | + | chr2_4:14147912-14147931 | None:intergenic | 35.0% | |
ACTAATGAAGATGAAGATGG+TGG | + | chr2_4:14147932-14147951 | None:intergenic | 35.0% | |
AATATGGGAGGGATTATTGT+TGG | - | chr2_4:14147963-14147982 | Msa0316850:intron | 35.0% | |
! | GATATCTTATCTTGGTCTTC+TGG | - | chr2_4:14148077-14148096 | Msa0316850:intron | 35.0% |
GATTAAAGGGTGGGAAAAAA+GGG | + | chr2_4:14148185-14148204 | None:intergenic | 35.0% | |
TGATTAAAGGGTGGGAAAAA+AGG | + | chr2_4:14148186-14148205 | None:intergenic | 35.0% | |
CACAAGAGCTAGATTCAAAA+TGG | - | chr2_4:14148263-14148282 | Msa0316850:intron | 35.0% | |
AAGTCACATGTGTAAGTGAA+AGG | + | chr2_4:14148868-14148887 | None:intergenic | 35.0% | |
CTTCAGTGTACATCTTGATA+GGG | + | chr2_4:14149126-14149145 | None:intergenic | 35.0% | |
TTATTCCTTCCTTCTCAAGT+GGG | + | chr2_4:14149162-14149181 | None:intergenic | 35.0% | |
AAGGAAAGAAAAGTGGTTGT+TGG | - | chr2_4:14147797-14147816 | Msa0316850:CDS | 35.0% | |
TGGTGGTTAGTATGTGTATA+TGG | + | chr2_4:14147912-14147931 | None:intergenic | 35.0% | |
ACTAATGAAGATGAAGATGG+TGG | + | chr2_4:14147932-14147951 | None:intergenic | 35.0% | |
AATATGGGAGGGATTATTGT+TGG | - | chr2_4:14147963-14147982 | Msa0316850:intron | 35.0% | |
! | GATATCTTATCTTGGTCTTC+TGG | - | chr2_4:14148077-14148096 | Msa0316850:intron | 35.0% |
GATTAAAGGGTGGGAAAAAA+GGG | + | chr2_4:14148185-14148204 | None:intergenic | 35.0% | |
TGATTAAAGGGTGGGAAAAA+AGG | + | chr2_4:14148186-14148205 | None:intergenic | 35.0% | |
CACAAGAGCTAGATTCAAAA+TGG | - | chr2_4:14148263-14148282 | Msa0316850:intron | 35.0% | |
AAGTCACATGTGTAAGTGAA+AGG | + | chr2_4:14148868-14148887 | None:intergenic | 35.0% | |
CTTCAGTGTACATCTTGATA+GGG | + | chr2_4:14149126-14149145 | None:intergenic | 35.0% | |
TTATTCCTTCCTTCTCAAGT+GGG | + | chr2_4:14149162-14149181 | None:intergenic | 35.0% | |
GGTGATGAAGGAAAGAAAAG+TGG | - | chr2_4:14147790-14147809 | Msa0316850:CDS | 40.0% | |
! | AATGAAGATGAAGATGGTGG+TGG | + | chr2_4:14147929-14147948 | None:intergenic | 40.0% |
!! | TGTTGGTGTTATTGTTGTGG+TGG | - | chr2_4:14147980-14147999 | Msa0316850:intron | 40.0% |
AACAAGTGAGGTACATCATG+TGG | - | chr2_4:14148022-14148041 | Msa0316850:intron | 40.0% | |
! | TCTTATCTTGGTCTTCTGGA+AGG | - | chr2_4:14148081-14148100 | Msa0316850:intron | 40.0% |
! | CTTATCTTGGTCTTCTGGAA+GGG | - | chr2_4:14148082-14148101 | Msa0316850:intron | 40.0% |
GTTCTTCATTCTAACTCTGC+TGG | + | chr2_4:14148354-14148373 | None:intergenic | 40.0% | |
CCTTCAGTGTACATCTTGAT+AGG | + | chr2_4:14149127-14149146 | None:intergenic | 40.0% | |
CCTATCAAGATGTACACTGA+AGG | - | chr2_4:14149124-14149143 | Msa0316850:five_prime_UTR | 40.0% | |
ACATACAATCCCACTTGAGA+AGG | - | chr2_4:14149150-14149169 | Msa0316850:five_prime_UTR | 40.0% | |
CTTATTCCTTCCTTCTCAAG+TGG | + | chr2_4:14149163-14149182 | None:intergenic | 40.0% | |
! | GACTCTGAGAATTGCAAGAA+TGG | - | chr2_4:14149199-14149218 | Msa0316850:five_prime_UTR | 40.0% |
GGTGATGAAGGAAAGAAAAG+TGG | - | chr2_4:14147790-14147809 | Msa0316850:CDS | 40.0% | |
! | AATGAAGATGAAGATGGTGG+TGG | + | chr2_4:14147929-14147948 | None:intergenic | 40.0% |
!! | TGTTGGTGTTATTGTTGTGG+TGG | - | chr2_4:14147980-14147999 | Msa0316850:intron | 40.0% |
AACAAGTGAGGTACATCATG+TGG | - | chr2_4:14148022-14148041 | Msa0316850:intron | 40.0% | |
! | TCTTATCTTGGTCTTCTGGA+AGG | - | chr2_4:14148081-14148100 | Msa0316850:intron | 40.0% |
! | CTTATCTTGGTCTTCTGGAA+GGG | - | chr2_4:14148082-14148101 | Msa0316850:intron | 40.0% |
GTTCTTCATTCTAACTCTGC+TGG | + | chr2_4:14148354-14148373 | None:intergenic | 40.0% | |
CCTTCAGTGTACATCTTGAT+AGG | + | chr2_4:14149127-14149146 | None:intergenic | 40.0% | |
CCTATCAAGATGTACACTGA+AGG | - | chr2_4:14149124-14149143 | Msa0316850:five_prime_UTR | 40.0% | |
ACATACAATCCCACTTGAGA+AGG | - | chr2_4:14149150-14149169 | Msa0316850:five_prime_UTR | 40.0% | |
CTTATTCCTTCCTTCTCAAG+TGG | + | chr2_4:14149163-14149182 | None:intergenic | 40.0% | |
! | GACTCTGAGAATTGCAAGAA+TGG | - | chr2_4:14149199-14149218 | Msa0316850:five_prime_UTR | 40.0% |
TGTTGTGGTGGCTATGATCA+TGG | - | chr2_4:14147992-14148011 | Msa0316850:intron | 45.0% | |
AAGTGAGGTACATCATGTGG+TGG | - | chr2_4:14148025-14148044 | Msa0316850:intron | 45.0% | |
AGTGAGGTACATCATGTGGT+GGG | - | chr2_4:14148026-14148045 | Msa0316850:intron | 45.0% | |
ACCACTTGCGTTGTTGCAAA+TGG | - | chr2_4:14148837-14148856 | Msa0316850:intron | 45.0% | |
ACCATTTGCAACAACGCAAG+TGG | + | chr2_4:14148841-14148860 | None:intergenic | 45.0% | |
!! | AGCACAAGGATTAGTTGCAG+AGG | - | chr2_4:14149060-14149079 | Msa0316850:exon | 45.0% |
ACAATCCCACTTGAGAAGGA+AGG | - | chr2_4:14149154-14149173 | Msa0316850:five_prime_UTR | 45.0% | |
TGTTGTGGTGGCTATGATCA+TGG | - | chr2_4:14147992-14148011 | Msa0316850:intron | 45.0% | |
AAGTGAGGTACATCATGTGG+TGG | - | chr2_4:14148025-14148044 | Msa0316850:intron | 45.0% | |
AGTGAGGTACATCATGTGGT+GGG | - | chr2_4:14148026-14148045 | Msa0316850:intron | 45.0% | |
ACCACTTGCGTTGTTGCAAA+TGG | - | chr2_4:14148837-14148856 | Msa0316850:intron | 45.0% | |
ACCATTTGCAACAACGCAAG+TGG | + | chr2_4:14148841-14148860 | None:intergenic | 45.0% | |
!! | AGCACAAGGATTAGTTGCAG+AGG | - | chr2_4:14149060-14149079 | Msa0316850:exon | 45.0% |
ACAATCCCACTTGAGAAGGA+AGG | - | chr2_4:14149154-14149173 | Msa0316850:five_prime_UTR | 45.0% | |
!! | AAATATAATAAAATAGAAAA+TGG | - | chr2_4:14148564-14148583 | Msa0316850:intron | 5.0% |
!! | AAATATAATAAAATAGAAAA+TGG | - | chr2_4:14148564-14148583 | Msa0316850:intron | 5.0% |
GGTGGCTATGATCATGGATG+TGG | - | chr2_4:14147998-14148017 | Msa0316850:intron | 50.0% | |
CATGGATGTGGCAACAAGTG+AGG | - | chr2_4:14148010-14148029 | Msa0316850:intron | 50.0% | |
! | GTCTTCTGGAAGGGTCTTCA+GGG | - | chr2_4:14148091-14148110 | Msa0316850:intron | 50.0% |
TTTGCGTACTCAGCAGCACA+AGG | - | chr2_4:14149046-14149065 | Msa0316850:exon | 50.0% | |
GGTGGCTATGATCATGGATG+TGG | - | chr2_4:14147998-14148017 | Msa0316850:intron | 50.0% | |
CATGGATGTGGCAACAAGTG+AGG | - | chr2_4:14148010-14148029 | Msa0316850:intron | 50.0% | |
! | GTCTTCTGGAAGGGTCTTCA+GGG | - | chr2_4:14148091-14148110 | Msa0316850:intron | 50.0% |
TTTGCGTACTCAGCAGCACA+AGG | - | chr2_4:14149046-14149065 | Msa0316850:exon | 50.0% | |
! | GAGGTACATCATGTGGTGGG+AGG | - | chr2_4:14148029-14148048 | Msa0316850:intron | 55.0% |
! | CATGTGGTGGGAGGAGATCA+TGG | - | chr2_4:14148038-14148057 | Msa0316850:intron | 55.0% |
TGGTGGGAGGAGATCATGGA+TGG | - | chr2_4:14148042-14148061 | Msa0316850:intron | 55.0% | |
GGTGGGAGGAGATCATGGAT+GGG | - | chr2_4:14148043-14148062 | Msa0316850:intron | 55.0% | |
! | GGTCTTCTGGAAGGGTCTTC+AGG | - | chr2_4:14148090-14148109 | Msa0316850:intron | 55.0% |
TCTGGAAGGGTCTTCAGGGT+TGG | - | chr2_4:14148095-14148114 | Msa0316850:intron | 55.0% | |
! | GAGGTACATCATGTGGTGGG+AGG | - | chr2_4:14148029-14148048 | Msa0316850:intron | 55.0% |
! | CATGTGGTGGGAGGAGATCA+TGG | - | chr2_4:14148038-14148057 | Msa0316850:intron | 55.0% |
TGGTGGGAGGAGATCATGGA+TGG | - | chr2_4:14148042-14148061 | Msa0316850:intron | 55.0% | |
GGTGGGAGGAGATCATGGAT+GGG | - | chr2_4:14148043-14148062 | Msa0316850:intron | 55.0% | |
! | GGTCTTCTGGAAGGGTCTTC+AGG | - | chr2_4:14148090-14148109 | Msa0316850:intron | 55.0% |
TCTGGAAGGGTCTTCAGGGT+TGG | - | chr2_4:14148095-14148114 | Msa0316850:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 14147784 | 14149240 | 14147784 | ID=Msa0316850;Name=Msa0316850 |
chr2_4 | mRNA | 14147784 | 14149240 | 14147784 | ID=Msa0316850-mRNA-1;Parent=Msa0316850;Name=Msa0316850-mRNA-1;_AED=0.11;_eAED=0.11;_QI=176|1|0.5|1|1|1|2|0|122 |
chr2_4 | exon | 14147784 | 14147980 | 14147784 | ID=Msa0316850-mRNA-1:exon:5397;Parent=Msa0316850-mRNA-1 |
chr2_4 | exon | 14148896 | 14149240 | 14148896 | ID=Msa0316850-mRNA-1:exon:5396;Parent=Msa0316850-mRNA-1 |
chr2_4 | five_prime_UTR | 14149065 | 14149240 | 14149065 | ID=Msa0316850-mRNA-1:five_prime_utr;Parent=Msa0316850-mRNA-1 |
chr2_4 | CDS | 14148896 | 14149064 | 14148896 | ID=Msa0316850-mRNA-1:cds;Parent=Msa0316850-mRNA-1 |
chr2_4 | CDS | 14147784 | 14147980 | 14147784 | ID=Msa0316850-mRNA-1:cds;Parent=Msa0316850-mRNA-1 |
Gene Sequence |
Protein sequence |