AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0461730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0461730 MtrunA17_Chr3g0102001 70.989 748 100 9 9 645 8 749 0.0 992
Msa0461730 MtrunA17_Chr5g0439061 60.064 313 120 3 335 645 435 744 5.14e-120 374
Msa0461730 MtrunA17_Chr5g0439061 47.150 193 94 2 21 207 21 211 7.53e-42 162
Msa0461730 MtrunA17_Chr3g0098481 52.848 316 138 4 333 642 32 342 6.68e-112 340
Msa0461730 MtrunA17_Chr3g0098541 64.311 283 35 5 49 276 1 272 8.96e-107 327
Msa0461730 MtrunA17_Chr3g0098531 50.505 297 137 4 354 645 6 297 8.93e-100 306
Msa0461730 MtrunA17_Chr2g0286601 31.624 702 380 16 21 641 7 689 1.04e-93 303
Msa0461730 MtrunA17_Chr3g0098301 42.537 402 200 9 255 636 12 402 1.02e-89 285
Msa0461730 MtrunA17_Chr5g0439051 65.686 204 69 1 442 645 20 222 3.31e-86 268
Msa0461730 MtrunA17_Chr2g0286551 46.429 308 157 3 335 641 368 668 7.61e-78 261
Msa0461730 MtrunA17_Chr2g0286551 37.126 167 95 6 21 185 7 165 1.18e-17 87.0
Msa0461730 MtrunA17_Chr5g0439081 55.779 199 86 1 442 640 16 212 9.48e-72 231
Msa0461730 MtrunA17_Chr2g0286561 48.095 210 109 0 432 641 5 214 1.09e-60 202
Msa0461730 MtrunA17_Chr5g0410171 28.593 668 391 22 6 632 110 732 4.73e-56 202
Msa0461730 MtrunA17_Chr5g0410341 27.859 682 393 22 6 632 107 744 1.90e-53 195
Msa0461730 MtrunA17_Chr5g0439021 53.049 164 75 1 21 184 21 182 2.17e-49 170
Msa0461730 MtrunA17_Chr5g0443001 32.982 379 228 8 263 630 237 600 9.86e-47 174
Msa0461730 MtrunA17_Chr2g0297701 34.459 296 184 3 338 630 280 568 3.09e-46 172
Msa0461730 MtrunA17_Chr3g0098491 50.625 160 67 3 28 184 1 151 1.10e-44 156
Msa0461730 MtrunA17_Chr2g0284501 37.299 311 177 5 335 637 367 667 1.97e-44 169
Msa0461730 MtrunA17_Chr5g0410201 32.459 305 185 4 337 632 34 326 2.73e-44 161
Msa0461730 MtrunA17_Chr5g0410271 32.787 305 184 4 337 632 33 325 4.73e-44 160
Msa0461730 MtrunA17_Chr6g0456101 26.733 606 374 17 57 630 174 741 7.14e-44 168
Msa0461730 MtrunA17_Chr2g0284541 37.538 325 179 8 322 637 340 649 8.48e-44 167
Msa0461730 MtrunA17_Chr3g0098521 50.311 161 68 4 28 185 1 152 2.62e-43 152
Msa0461730 MtrunA17_Chr2g0297481 33.333 297 183 6 337 630 186 470 6.15e-42 159
Msa0461730 MtrunA17_Chr6g0457101 32.776 299 189 4 337 632 397 686 1.15e-41 161
Msa0461730 MtrunA17_Chr6g0456141 32.450 302 186 4 337 632 93 382 6.94e-41 153
Msa0461730 MtrunA17_Chr5g0439071 50.000 166 80 2 21 185 21 184 7.61e-41 157
Msa0461730 MtrunA17_Chr2g0297491 33.333 297 187 4 337 630 88 376 1.22e-40 152
Msa0461730 MtrunA17_Chr2g0297691 31.776 321 205 6 317 630 377 690 2.00e-40 157
Msa0461730 MtrunA17_Chr2g0297681 31.366 322 207 6 317 631 375 689 4.48e-40 156
Msa0461730 MtrunA17_Chr3g0100741 33.688 282 178 4 337 617 308 581 7.62e-39 151
Msa0461730 MtrunA17_Chr3g0098291 51.515 165 72 5 23 185 27 185 3.29e-38 141
Msa0461730 MtrunA17_Chr5g0410371 34.106 302 182 6 337 630 1 293 4.16e-38 143
Msa0461730 MtrunA17_Chr5g0410461 33.555 301 186 4 337 630 168 461 4.43e-37 144
Msa0461730 MtrunA17_Chr2g0297651 32.609 322 200 8 317 630 377 689 7.89e-37 146
Msa0461730 MtrunA17_Chr3g0100301 37.374 198 122 2 426 622 204 400 1.36e-35 139
Msa0461730 MtrunA17_Chr3g0096941 24.333 600 379 14 28 613 41 579 1.40e-35 142
Msa0461730 MtrunA17_Chr2g0297711 29.630 297 194 5 340 630 238 525 6.59e-34 136
Msa0461730 MtrunA17_Chr5g0410191 36.932 176 110 1 457 632 17 191 1.32e-32 124
Msa0461730 MtrunA17_Chr5g0439041 49.242 132 63 2 313 442 39 168 1.62e-32 124
Msa0461730 MtrunA17_Chr5g0410581 30.584 291 191 4 337 621 499 784 9.93e-31 128
Msa0461730 MtrunA17_Chr3g0098511 51.515 99 46 1 546 642 1 99 2.10e-30 115
Msa0461730 MtrunA17_Chr5g0410541 38.028 142 87 1 457 598 38 178 3.14e-22 95.9
Msa0461730 MtrunA17_Chr5g0410451 33.117 154 103 0 436 589 35 188 3.64e-20 90.1
Msa0461730 MtrunA17_Chr2g0286571 35.503 169 95 4 21 185 7 165 4.77e-20 91.7
Msa0461730 MtrunA17_Chr5g0410181 33.333 132 87 1 501 632 2 132 7.89e-19 83.2
Msa0461730 MtrunA17_Chr5g0410511 33.784 148 98 0 442 589 2 149 5.11e-17 80.1
Msa0461730 MtrunA17_Chr1g0211531 26.087 299 201 8 340 628 243 531 4.95e-14 75.1
Msa0461730 MtrunA17_Chr2g0297611 37.079 89 54 2 447 535 1 87 2.00e-13 66.2
Msa0461730 MtrunA17_Chr3g0100921 28.030 132 95 0 491 622 2 133 1.90e-11 62.4
Msa0461730 MtrunA17_Chr1g0211511 23.605 233 165 5 324 551 1 225 7.17e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0461730 AT5G35810.1 33.550 307 186 5 335 630 31 330 7.24e-45 164
Msa0461730 AT3G18670.1 33.013 312 197 5 337 645 293 595 1.79e-44 168
Msa0461730 AT3G18670.2 33.013 312 197 5 337 645 348 650 2.51e-44 168
Msa0461730 AT5G04690.3 28.067 595 340 19 57 634 111 634 2.59e-42 162
Msa0461730 AT5G04690.2 28.094 598 350 19 57 634 111 648 3.05e-42 162
Msa0461730 AT5G04730.1 34.211 304 184 6 337 634 298 591 3.73e-42 161
Msa0461730 AT5G04700.1 28.378 592 361 19 57 634 116 658 2.31e-40 157
Msa0461730 AT3G54065.1 36.667 210 127 1 428 631 8 217 2.39e-36 136
Msa0461730 AT5G04690.1 37.131 237 132 6 407 634 386 614 2.39e-36 145
Msa0461730 AT5G04680.1 27.063 606 388 21 57 634 103 682 5.90e-32 132
Msa0461730 AT5G04680.4 27.880 599 363 23 57 634 103 653 1.09e-31 131
Msa0461730 AT5G04680.3 27.425 598 353 21 57 634 103 639 6.02e-31 129
Msa0461730 AT5G04680.2 27.936 562 337 22 90 630 12 526 1.52e-30 126

Find 114 sgRNAs with CRISPR-Local

Find 542 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGAACGTGAAGCAATTT+TGG 0.139641 3_3:+60213837 Msa0461730:CDS
TTTGCTTTGTCTTCAGTAAT+TGG 0.161186 3_3:+60216180 Msa0461730:CDS
TGATCGTAAGAAAGCAATTT+TGG 0.171879 3_3:+60213945 Msa0461730:CDS
CGATTGCTTCATCAACGTTT+AGG 0.226838 3_3:-60211916 None:intergenic
CATATCAATTCTGAAATCTT+TGG 0.253328 3_3:-60216265 None:intergenic
TTTCTTGCTGCAGTCAAAAT+TGG 0.254979 3_3:-60213979 None:intergenic
TTCCAAGTTAAGGTCGTATA+TGG 0.261111 3_3:-60214049 None:intergenic
GATATACATTAGAAGGAAAA+TGG 0.281927 3_3:+60208859 Msa0461730:CDS
GTGGCATATCAAATGGTTTC+AGG 0.294033 3_3:+60214278 Msa0461730:CDS
AGCGACGAACATTGCAATAA+TGG 0.298105 3_3:-60216328 None:intergenic
TATGCCAAGGAAACTTCTTT+TGG 0.300612 3_3:+60216284 Msa0461730:CDS
CCAATGTCGTTGAGGCATTA+AGG 0.302274 3_3:+60214112 Msa0461730:CDS
GATTGCTTCATCAACGTTTA+GGG 0.311454 3_3:-60211915 None:intergenic
CTTACATGTAAGAATGAAAA+AGG 0.321199 3_3:+60209044 Msa0461730:CDS
TAACATGTGTCGCAGTTCTT+TGG 0.322238 3_3:-60211983 None:intergenic
GTTCCAATCTCGATCACTTT+TGG 0.346166 3_3:-60214229 None:intergenic
AGGAAAATGGAAAGAAGTTA+AGG 0.357242 3_3:+60208872 Msa0461730:CDS
GTAGTAGCAGCACTCCTTGC+CGG 0.383621 3_3:+60216066 Msa0461730:CDS
CTAAGGGGATATACATTAGA+AGG 0.388545 3_3:+60208852 Msa0461730:CDS
TATATTTATATGTATGATGT+TGG 0.391082 3_3:+60216633 Msa0461730:three_prime_UTR
AATATATGTGAATGTATCAT+AGG 0.402918 3_3:+60209107 Msa0461730:CDS
TGTTCCTTGCTGCATTGTCT+TGG 0.403833 3_3:+60209189 Msa0461730:CDS
ATCACTTGTCTTTGGCACTT+TGG 0.403980 3_3:-60216493 None:intergenic
ATTGACATTGATAACGAGAA+TGG 0.409748 3_3:+60209155 Msa0461730:CDS
GTGCCAAAGACAAGTGATAA+GGG 0.412267 3_3:+60216498 Msa0461730:CDS
TCTCTTCCTTATCCACCCCT+TGG 0.414114 3_3:-60214182 None:intergenic
GATCGAGATTGGAACATATC+TGG 0.414209 3_3:+60214237 Msa0461730:CDS
TTTGGTCAATAAGAAAGAAA+TGG 0.416646 3_3:-60216362 None:intergenic
CAAGAAATCACATGAAGAAC+TGG 0.428386 3_3:+60215996 Msa0461730:CDS
AATCCCAAAAGAAGTTTCCT+TGG 0.428987 3_3:-60216288 None:intergenic
TTTGCAGGATCTAAAGATAT+GGG 0.435677 3_3:+60212626 Msa0461730:intron
TGAAACTCAGATTGAATTGA+AGG 0.437154 3_3:-60207552 None:intergenic
GTTCTAACTGCGAAATGCTC+TGG 0.439567 3_3:-60215940 None:intergenic
ATCTGAATGCAAGCTTCTTC+CGG 0.440295 3_3:+60212670 Msa0461730:CDS
ATAACAGTACTACCTATGTT+TGG 0.441146 3_3:+60216576 Msa0461730:three_prime_UTR
TTCCATATACGACCTTAACT+TGG 0.451334 3_3:+60214047 Msa0461730:CDS
CTACCAAAAGTGATCGAGAT+TGG 0.451436 3_3:+60214226 Msa0461730:CDS
GCAGGCCTTCCTTCCAATGC+TGG 0.454814 3_3:-60216147 None:intergenic
TGCTTAGCAAAACTTATAAG+TGG 0.456546 3_3:-60212040 None:intergenic
TGATGAAGTGAAAATGTGTT+TGG 0.457552 3_3:+60216541 Msa0461730:three_prime_UTR
TCTAATCCAAGGGGTGGATA+AGG 0.457971 3_3:+60214176 Msa0461730:CDS
GGCGGCAACAGAAGTGAAAC+AGG 0.460466 3_3:+60216120 Msa0461730:CDS
TTCGAGTTAAAATGTAGTTA+TGG 0.461915 3_3:+60209236 Msa0461730:CDS
GTTTCACTTCTGTTGCCGCC+TGG 0.465087 3_3:-60216117 None:intergenic
AGTGTTCGTCATGGTCTTCA+AGG 0.468479 3_3:-60207576 None:intergenic
TACTTGTAGCAGTTGAGAAT+AGG 0.475785 3_3:+60214085 Msa0461730:CDS
AAATGGCATAGTTGAAATAG+TGG 0.476650 3_3:+60213999 Msa0461730:CDS
GTATTCTTCATTGTGCCATC+CGG 0.491354 3_3:+60209300 Msa0461730:CDS
AGTGCCAAAGACAAGTGATA+AGG 0.491616 3_3:+60216497 Msa0461730:CDS
TTCTTCCAGAGGACAAGCTA+AGG 0.493101 3_3:+60208835 Msa0461730:intron
CATGAAGAACTGGTAACAAA+AGG 0.493971 3_3:+60216006 Msa0461730:CDS
TGAAACAGGTGAACCAGCAT+TGG 0.494721 3_3:+60216134 Msa0461730:CDS
TTCTTTGGACATGATTCTTG+TGG 0.498729 3_3:-60211968 None:intergenic
GGAAGTTGTTAAAAGTCTTG+TGG 0.501379 3_3:+60208989 Msa0461730:CDS
ACTACTTCTAATGCTGCAAA+TGG 0.506668 3_3:+60212082 Msa0461730:CDS
TTCGAGAAGTGAGTATGGAC+AGG 0.510529 3_3:-60216236 None:intergenic
TGAATCCTCTTGATGCTGCA+AGG 0.512864 3_3:-60209082 None:intergenic
CACATGGATCAGTATACTAA+AGG 0.513149 3_3:+60215910 Msa0461730:intron
CTAAGAAGATCAATGTAAAG+TGG 0.514162 3_3:-60216459 None:intergenic
CTTGATGCTGCAAGGTGCAA+AGG 0.522226 3_3:-60209074 None:intergenic
AACAAAGATGACAAAACAGC+TGG 0.522635 3_3:+60215964 Msa0461730:CDS
CCTTAATGCCTCAACGACAT+TGG 0.524122 3_3:-60214112 None:intergenic
GTGAACCAGCATTGGAAGGA+AGG 0.530748 3_3:+60216142 Msa0461730:CDS
AGACAATGCAGCAAGGAACA+AGG 0.532044 3_3:-60209186 None:intergenic
GATATGGGAGAGAAAGACAA+AGG 0.533983 3_3:+60212641 Msa0461730:CDS
TGGTAACAAAAGGTAGTGAA+TGG 0.535089 3_3:+60216016 Msa0461730:CDS
TCTTCCAGAGGACAAGCTAA+GGG 0.541537 3_3:+60208836 Msa0461730:intron
ATGAAGCAATCGAATATTGT+CGG 0.541968 3_3:+60211927 Msa0461730:CDS
GCTATTGCATACAAAGTCAC+AGG 0.544603 3_3:-60216429 None:intergenic
AAATGATGTGGCATATCAAA+TGG 0.546302 3_3:+60214271 Msa0461730:CDS
ATATGGGAGAGAAAGACAAA+GGG 0.558219 3_3:+60212642 Msa0461730:CDS
TTAAGGTCGTATATGGAACT+TGG 0.559940 3_3:-60214042 None:intergenic
ATATTTGATGATCTAATCCA+AGG 0.560273 3_3:+60214165 Msa0461730:CDS
ATTTCAGAATTGATATGCCA+AGG 0.560690 3_3:+60216271 Msa0461730:CDS
TCATAGGAAAAGATGGTGAA+AGG 0.561859 3_3:+60209123 Msa0461730:CDS
TTGCACCTTGCAGCATCAAG+AGG 0.564363 3_3:+60209077 Msa0461730:CDS
GGAAGAAGCTTGCATTCAGA+TGG 0.566772 3_3:-60212668 None:intergenic
CTACACGTGGCAGTAAATGA+TGG 0.568764 3_3:+60208960 Msa0461730:CDS
TATTTGATGATCTAATCCAA+GGG 0.570566 3_3:+60214166 Msa0461730:CDS
AAGTATACTGCTCCAAACAT+AGG 0.570656 3_3:-60216588 None:intergenic
GATATGCCACATCATTTGCA+AGG 0.574090 3_3:-60214265 None:intergenic
AGCAAGTGACTGAATAAATG+AGG 0.575232 3_3:-60216404 None:intergenic
GCTACATCAAGCACTGTACC+AGG 0.575420 3_3:+60216099 Msa0461730:CDS
ATATGTATGATGTTGGATTG+TGG 0.575658 3_3:+60216640 Msa0461730:three_prime_UTR
GACAATGCAGCAAGGAACAA+GGG 0.577791 3_3:-60209185 None:intergenic
AAAGCAAATGCATCAAATGC+AGG 0.578955 3_3:-60216165 None:intergenic
GTGCTGCCTTGCAAATGATG+TGG 0.592481 3_3:+60214259 Msa0461730:CDS
GAATGTATCATAGGAAAAGA+TGG 0.595958 3_3:+60209116 Msa0461730:CDS
GAGTTAAAATGTAGTTATGG+TGG 0.597793 3_3:+60209239 Msa0461730:CDS
ACAGGTGAACCAGCATTGGA+AGG 0.599054 3_3:+60216138 Msa0461730:CDS
TACAGTGCTTGATGTAGCGA+AGG 0.603317 3_3:-60216094 None:intergenic
CACATCTCTAGTGTTCGTCA+TGG 0.610473 3_3:-60207585 None:intergenic
TACTACAGAGCAAGATTCAG+AGG 0.613459 3_3:-60216049 None:intergenic
ATCAACGTTTAGGGTTCCCG+CGG 0.617221 3_3:-60211906 None:intergenic
CTTCCAGAGGACAAGCTAAG+GGG 0.618628 3_3:+60208837 Msa0461730:intron
ATAGAGATCAACAAAAGTAG+AGG 0.623346 3_3:+60208930 Msa0461730:CDS
TGCCAAAGACAAGTGATAAG+GGG 0.626830 3_3:+60216499 Msa0461730:CDS
CATGACGAACACTAGAGATG+TGG 0.628983 3_3:+60207586 Msa0461730:exon
GACAGCACACACATGACGAA+AGG 0.637551 3_3:+60207623 Msa0461730:CDS
TGATGATCTAATCCAAGGGG+TGG 0.637981 3_3:+60214170 Msa0461730:CDS
GGCAGTAAATGATGGCAATG+AGG 0.641440 3_3:+60208968 Msa0461730:CDS
TGATGTAGCGAAGGAAACAC+CGG 0.642955 3_3:-60216085 None:intergenic
TCAACGTTTAGGGTTCCCGC+GGG 0.646060 3_3:-60211905 None:intergenic
GCCAAAGACAAGTGATAAGG+GGG 0.646133 3_3:+60216500 Msa0461730:CDS
TAGCGAAGGAAACACCGGCA+AGG 0.651641 3_3:-60216080 None:intergenic
TTTGCCAAGACAATGCAGCA+AGG 0.653900 3_3:-60209193 None:intergenic
CTATTGCATACAAAGTCACA+GGG 0.657703 3_3:-60216428 None:intergenic
TAGGAGAACCAATGTCGTTG+AGG 0.663123 3_3:+60214104 Msa0461730:CDS
TAGAGGAACAGCACTACACG+TGG 0.671680 3_3:+60208947 Msa0461730:CDS
CTATCAAAAGGTATACCCGC+GGG 0.672186 3_3:+60211890 Msa0461730:intron
TGCAGGAGATAACAACAATG+AGG 0.695234 3_3:+60213795 Msa0461730:intron
CCTATCAAAAGGTATACCCG+CGG 0.696092 3_3:+60211889 Msa0461730:intron
ATTTGATGATCTAATCCAAG+GGG 0.710471 3_3:+60214167 Msa0461730:CDS
ACATCAAGCACTGTACCAGG+CGG 0.758516 3_3:+60216102 Msa0461730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAAATAAAAAAAT+TGG - chr3_3:60211752-60211771 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTTTTA+AGG - chr3_3:60215374-60215393 None:intergenic 0.0%
!!! GTTTTTATTATCTAATTTAT+AGG - chr3_3:60208028-60208047 None:intergenic 10.0%
!!! ATGAAATTATTTTCTAATTT+TGG - chr3_3:60208483-60208502 None:intergenic 10.0%
!! ATTAGTATAAATATTGTATT+GGG - chr3_3:60209750-60209769 None:intergenic 10.0%
!! AATTAGTATAAATATTGTAT+TGG - chr3_3:60209751-60209770 None:intergenic 10.0%
!! AATATACATAAATATTAGTA+GGG - chr3_3:60209810-60209829 None:intergenic 10.0%
!!! TTTTTTACATGATTATTTAA+TGG - chr3_3:60210462-60210481 None:intergenic 10.0%
!!! AAATTTTCTGTAAAAAAAAT+AGG + chr3_3:60211462-60211481 Msa0461730:intron 10.0%
!! TAAAAAAAATAGGAATTTAT+TGG + chr3_3:60211472-60211491 Msa0461730:intron 10.0%
!! AAATAAATAAAAAAATTGGT+GGG - chr3_3:60211748-60211767 None:intergenic 10.0%
!! AAAATAAATAAAAAAATTGG+TGG - chr3_3:60211749-60211768 None:intergenic 10.0%
!!! ATATCATTGTATTTTTATTT+TGG + chr3_3:60213309-60213328 Msa0461730:intron 10.0%
!!! ATAATATCATTTTTAGATAA+GGG - chr3_3:60215121-60215140 None:intergenic 10.0%
!!! AATAATATCATTTTTAGATA+AGG - chr3_3:60215122-60215141 None:intergenic 10.0%
!!! ATTTCAACTATTTTTATAAC+TGG - chr3_3:60207682-60207701 None:intergenic 15.0%
!! GTATAATTACATTTGAAAAT+GGG - chr3_3:60208125-60208144 None:intergenic 15.0%
!! AGTATAATTACATTTGAAAA+TGG - chr3_3:60208126-60208145 None:intergenic 15.0%
!! AATTTAAACATGTTCTTAAT+CGG - chr3_3:60208561-60208580 None:intergenic 15.0%
!!! AAAGAATTGTTTTTTTTTGA+AGG - chr3_3:60209671-60209690 None:intergenic 15.0%
!! CAATATACATAAATATTAGT+AGG - chr3_3:60209811-60209830 None:intergenic 15.0%
!! TCTAATTTATAAACCATTTA+AGG + chr3_3:60210409-60210428 Msa0461730:intron 15.0%
!! AACTTCTTTAATCAAAATTA+AGG - chr3_3:60211070-60211089 None:intergenic 15.0%
!!! TTATTGATAATTGTTTGTTA+TGG + chr3_3:60211204-60211223 Msa0461730:intron 15.0%
!!! TATTGATAATTGTTTGTTAT+GGG + chr3_3:60211205-60211224 Msa0461730:intron 15.0%
!!! TAACTAACAATTTTTTTTTG+TGG + chr3_3:60211278-60211297 Msa0461730:intron 15.0%
!! TTTATATTATGACAAAGATA+AGG - chr3_3:60211647-60211666 None:intergenic 15.0%
!! AATAAATAAAAAAATTGGTG+GGG - chr3_3:60211747-60211766 None:intergenic 15.0%
!!! ATATTTCTAAAGAACAAAAA+GGG - chr3_3:60211823-60211842 None:intergenic 15.0%
!!! TATATTTCTAAAGAACAAAA+AGG - chr3_3:60211824-60211843 None:intergenic 15.0%
!! TTATATATTTCAAATTGCAA+CGG - chr3_3:60212332-60212351 None:intergenic 15.0%
!!! TTCCTTGATTTAAAATAAAT+GGG - chr3_3:60213504-60213523 None:intergenic 15.0%
!!! TTTTGAAATATGCATTATTT+TGG - chr3_3:60214374-60214393 None:intergenic 15.0%
!! AAAGTGATGAAATAAAAAAT+AGG + chr3_3:60215607-60215626 Msa0461730:intron 15.0%
!! AAGTGATGAAATAAAAAATA+GGG + chr3_3:60215608-60215627 Msa0461730:intron 15.0%
!! AAATAAAAAATAGGGATAAA+TGG + chr3_3:60215616-60215635 Msa0461730:intron 15.0%
!!! TTGGATTTGTAATATTTTAA+TGG - chr3_3:60215755-60215774 None:intergenic 15.0%
!! TATATTTATATGTATGATGT+TGG + chr3_3:60216633-60216652 Msa0461730:three_prime_UTR 15.0%
!!! TATAACTGGTTATTTTTCAT+TGG - chr3_3:60207668-60207687 None:intergenic 20.0%
!!! CATCAATTTCATTTTTTTTC+CGG + chr3_3:60208071-60208090 Msa0461730:intron 20.0%
!!! TTTTTCCGTTTAAAAAGTAA+AGG + chr3_3:60208181-60208200 Msa0461730:intron 20.0%
!!! TACTTTTTCTTTGCAAATTA+TGG - chr3_3:60208271-60208290 None:intergenic 20.0%
!!! ATAATTTGCAAAGAAAAAGT+AGG + chr3_3:60208270-60208289 Msa0461730:intron 20.0%
!! ATTATAGACAGGAAAAATAA+AGG - chr3_3:60208421-60208440 None:intergenic 20.0%
!!! TTAAGTTGTTTATTCAAACA+AGG + chr3_3:60208790-60208809 Msa0461730:intron 20.0%
!!! TTTTTCATTCTTACATGTAA+GGG - chr3_3:60209045-60209064 None:intergenic 20.0%
!! AATATATGTGAATGTATCAT+AGG + chr3_3:60209107-60209126 Msa0461730:CDS 20.0%
!!! ATTTTTTCGAATAAGATCTT+TGG - chr3_3:60209273-60209292 None:intergenic 20.0%
!! AAAGATCTTATTCGAAAAAA+TGG + chr3_3:60209272-60209291 Msa0461730:CDS 20.0%
!! AAGATCTTATTCGAAAAAAT+GGG + chr3_3:60209273-60209292 Msa0461730:CDS 20.0%
!!! AATGCAATTAAAAAAAGTAC+AGG + chr3_3:60209497-60209516 Msa0461730:intron 20.0%
!! TTCTCTTATATGTTTAAACA+TGG + chr3_3:60210111-60210130 Msa0461730:intron 20.0%
!! AAATGGTTTATAAATTAGAG+TGG - chr3_3:60210408-60210427 None:intergenic 20.0%
!! TAAAATATAATTCGTCATGA+TGG - chr3_3:60210491-60210510 None:intergenic 20.0%
!!! TGACGAATTATATTTTAAAG+TGG + chr3_3:60210494-60210513 Msa0461730:intron 20.0%
!!! GTATCGACAAATAAAATTAT+TGG - chr3_3:60210583-60210602 None:intergenic 20.0%
!! AAATATCCACTTTCATAATT+TGG + chr3_3:60211531-60211550 Msa0461730:intron 20.0%
!!! GTTGTGATATTTTTTCTATT+TGG + chr3_3:60212136-60212155 Msa0461730:intron 20.0%
!! GGCTATTACAATTATTAAAA+TGG + chr3_3:60212236-60212255 Msa0461730:intron 20.0%
!!! CTATTTGATTTAGTCTATTT+TGG - chr3_3:60212406-60212425 None:intergenic 20.0%
!! AAATAGAAATTGAAACCATT+TGG + chr3_3:60212420-60212439 Msa0461730:intron 20.0%
!!! AAGATTTTCTTTAAAGAATG+AGG - chr3_3:60212787-60212806 None:intergenic 20.0%
!!! GCTCAAATATTTTTTATTTG+AGG - chr3_3:60212822-60212841 None:intergenic 20.0%
!!! TCCAGACATTTTTTTTATTT+GGG + chr3_3:60212914-60212933 Msa0461730:intron 20.0%
!! GTCTTAAATATAAGTGAAAT+TGG - chr3_3:60213206-60213225 None:intergenic 20.0%
!!! AACCCATTTATTTTAAATCA+AGG + chr3_3:60213499-60213518 Msa0461730:intron 20.0%
!!! CTTCCTTGATTTAAAATAAA+TGG - chr3_3:60213505-60213524 None:intergenic 20.0%
!!! GATTAATGACCTTTTAATTA+AGG + chr3_3:60213594-60213613 Msa0461730:intron 20.0%
!! ATGAAATGTCCTTAATTAAA+AGG - chr3_3:60213606-60213625 None:intergenic 20.0%
!!! ATCAATGATTGTTTTAATCA+GGG - chr3_3:60213650-60213669 None:intergenic 20.0%
!!! AATCAATGATTGTTTTAATC+AGG - chr3_3:60213651-60213670 None:intergenic 20.0%
!! TGATTAAAACAATCATTGAT+TGG + chr3_3:60213650-60213669 Msa0461730:intron 20.0%
!!! CATTTTTATTTTCCAAGTTA+AGG - chr3_3:60214062-60214081 None:intergenic 20.0%
!!! TATTTCTTTTCTTTCAAATC+AGG + chr3_3:60214301-60214320 Msa0461730:intron 20.0%
!!! GTATTATGAGGATATTTTTT+AGG - chr3_3:60214654-60214673 None:intergenic 20.0%
!!! ATTCTAAAATATCCAAACAA+TGG - chr3_3:60215018-60215037 None:intergenic 20.0%
!!! ATTGTTTGGATATTTTAGAA+TGG + chr3_3:60215017-60215036 Msa0461730:intron 20.0%
!! AAATAAATTGCAGACAAAAA+AGG + chr3_3:60215567-60215586 Msa0461730:intron 20.0%
!!! AATATTTTAATGGAATGAGA+TGG - chr3_3:60215745-60215764 None:intergenic 20.0%
!! AATATTACAAATCCAAACAA+CGG + chr3_3:60215759-60215778 Msa0461730:intron 20.0%
! AAGAAAGAAAAATGTGAGAT+GGG - chr3_3:60207528-60207547 None:intergenic 25.0%
! AAAGAAAGAAAAATGTGAGA+TGG - chr3_3:60207529-60207548 None:intergenic 25.0%
!!! AAGAAACAAAAAGTATTGTC+TGG - chr3_3:60207711-60207730 None:intergenic 25.0%
! TAACTGTGACTAATCTTTAT+CGG - chr3_3:60207958-60207977 None:intergenic 25.0%
!! AGATTAGTCACAGTTAAATA+AGG + chr3_3:60207962-60207981 Msa0461730:intron 25.0%
!! GATTAGTCACAGTTAAATAA+GGG + chr3_3:60207963-60207982 Msa0461730:intron 25.0%
!!! AATTTCATTTTTTTTCCGGA+AGG + chr3_3:60208075-60208094 Msa0461730:intron 25.0%
!! AAAATGAAATTGATTCCTTC+CGG - chr3_3:60208093-60208112 None:intergenic 25.0%
!!! GTCTTCCTTTACTTTTTAAA+CGG - chr3_3:60208189-60208208 None:intergenic 25.0%
! AAATAAGTTGTCAACCAAAT+TGG - chr3_3:60208243-60208262 None:intergenic 25.0%
! TGATATATGAACATCCATTT+GGG - chr3_3:60208379-60208398 None:intergenic 25.0%
! ATGATATATGAACATCCATT+TGG - chr3_3:60208380-60208399 None:intergenic 25.0%
! CAATCTACTATTAAAACAAG+TGG - chr3_3:60208535-60208554 None:intergenic 25.0%
! GATATACATTAGAAGGAAAA+TGG + chr3_3:60208859-60208878 Msa0461730:CDS 25.0%
!!! CTTTTTCATTCTTACATGTA+AGG - chr3_3:60209046-60209065 None:intergenic 25.0%
! CTTACATGTAAGAATGAAAA+AGG + chr3_3:60209044-60209063 Msa0461730:CDS 25.0%
!! TTCGAGTTAAAATGTAGTTA+TGG + chr3_3:60209236-60209255 Msa0461730:CDS 25.0%
! AGATCTTATTCGAAAAAATG+GGG + chr3_3:60209274-60209293 Msa0461730:CDS 25.0%
! AATTACCAAAAAATTCTCTC+CGG - chr3_3:60209322-60209341 None:intergenic 25.0%
! GAAGTAGAGAATATTATGTT+GGG - chr3_3:60209415-60209434 None:intergenic 25.0%
! AGAAGTAGAGAATATTATGT+TGG - chr3_3:60209416-60209435 None:intergenic 25.0%
! TATGTATATTGCAACAGATT+TGG + chr3_3:60209820-60209839 Msa0461730:intron 25.0%
! TTGAGAAGAAATTATTGTCT+TGG + chr3_3:60210037-60210056 Msa0461730:intron 25.0%
! TGAGAAGAAATTATTGTCTT+GGG + chr3_3:60210038-60210057 Msa0461730:intron 25.0%
! GTAAGATAGACATATAAGAT+TGG - chr3_3:60210276-60210295 None:intergenic 25.0%
! CATAGTTGTATAACCTTAAA+TGG - chr3_3:60210425-60210444 None:intergenic 25.0%
! ACAAAAATATCTACGTAAAG+AGG + chr3_3:60210542-60210561 Msa0461730:intron 25.0%
! TAGTCAAACGATACTTAAAA+AGG - chr3_3:60210623-60210642 None:intergenic 25.0%
! TTGAATGTAATCATATGTGT+CGG - chr3_3:60210722-60210741 None:intergenic 25.0%
! AGATAAGAGTAATTGAGAAA+AGG - chr3_3:60210820-60210839 None:intergenic 25.0%
!!! ACTTTTGATTAATGTGAAGT+TGG + chr3_3:60211113-60211132 Msa0461730:intron 25.0%
!!! CTAACAATTTTTTTTTGTGG+TGG + chr3_3:60211281-60211300 Msa0461730:intron 25.0%
! AAAAAAAAAGGTTCAAATCC+CGG - chr3_3:60211307-60211326 None:intergenic 25.0%
!!! TGAACCTTTTTTTTTTGTGA+TGG + chr3_3:60211312-60211331 Msa0461730:intron 25.0%
! AGATAACGCATTAAACTTAT+TGG + chr3_3:60211433-60211452 Msa0461730:intron 25.0%
! ATTTATTGGTGAAGTAAATG+AGG + chr3_3:60211486-60211505 Msa0461730:intron 25.0%
! TTTATTGGTGAAGTAAATGA+GGG + chr3_3:60211487-60211506 Msa0461730:intron 25.0%
!!! ATATTTTTTCTATTTGGCCA+GGG + chr3_3:60212142-60212161 Msa0461730:intron 25.0%
! AAGATTTCAAGGAATAGATA+AGG + chr3_3:60212215-60212234 Msa0461730:intron 25.0%
! ATTATTAAAATGGTCCAATG+AGG + chr3_3:60212246-60212265 Msa0461730:intron 25.0%
!!! TTTGGATTTTTCAAAATCCA+AGG - chr3_3:60212388-60212407 None:intergenic 25.0%
! CTTAGAGAAAATTTATGCTA+TGG - chr3_3:60212478-60212497 None:intergenic 25.0%
!! CATAGCATAAATTTTCTCTA+AGG + chr3_3:60212476-60212495 Msa0461730:intron 25.0%
!!! CTTTTTGATTCTCAAAATGA+GGG - chr3_3:60212523-60212542 None:intergenic 25.0%
!!! AAATTAAGCTATGTTTTTGC+AGG + chr3_3:60212611-60212630 Msa0461730:intron 25.0%
!!! GTCCAGACATTTTTTTTATT+TGG + chr3_3:60212913-60212932 Msa0461730:intron 25.0%
!!! CCAGACATTTTTTTTATTTG+GGG + chr3_3:60212915-60212934 Msa0461730:intron 25.0%
! CCATAAAACAATAACAATCA+AGG - chr3_3:60212947-60212966 None:intergenic 25.0%
!!! CCTTGATTGTTATTGTTTTA+TGG + chr3_3:60212944-60212963 Msa0461730:intron 25.0%
!! TGTGTTCAAAATTTGCTTAA+AGG + chr3_3:60212968-60212987 Msa0461730:intron 25.0%
!! GTGTTCAAAATTTGCTTAAA+GGG + chr3_3:60212969-60212988 Msa0461730:intron 25.0%
!! TGTTCAAAATTTGCTTAAAG+GGG + chr3_3:60212970-60212989 Msa0461730:intron 25.0%
!! TCATTTCGATTTGATCATAA+GGG + chr3_3:60213235-60213254 Msa0461730:intron 25.0%
!!! GCAAATTTTTACTTTTGTCT+TGG - chr3_3:60213415-60213434 None:intergenic 25.0%
! TTATCGTAGAAATTATGTCT+TGG - chr3_3:60213442-60213461 None:intergenic 25.0%
! ATAACATAAATGAAACTTGC+AGG + chr3_3:60213778-60213797 Msa0461730:intron 25.0%
!! TTTTGACAAGTGCAATAAAA+TGG + chr3_3:60214140-60214159 Msa0461730:CDS 25.0%
!! ATATTTGATGATCTAATCCA+AGG + chr3_3:60214165-60214184 Msa0461730:CDS 25.0%
!! TATTTGATGATCTAATCCAA+GGG + chr3_3:60214166-60214185 Msa0461730:CDS 25.0%
! TGTAAATGTGTTTGCAATTT+GGG + chr3_3:60214451-60214470 Msa0461730:intron 25.0%
! TTATGAAGAAAAATATCCTC+CGG - chr3_3:60214585-60214604 None:intergenic 25.0%
!!! CTTCATAATTTTAACACCTT+CGG + chr3_3:60214597-60214616 Msa0461730:intron 25.0%
! TTGTATTTCATCAATCCAAA+CGG - chr3_3:60214937-60214956 None:intergenic 25.0%
! TTTGGATTGATGAAATACAA+TGG + chr3_3:60214937-60214956 Msa0461730:intron 25.0%
! AAAATATCCAAACAATGGAA+GGG - chr3_3:60215013-60215032 None:intergenic 25.0%
! TAAAATATCCAAACAATGGA+AGG - chr3_3:60215014-60215033 None:intergenic 25.0%
!! TTTTTAGATAAGGGTAAAGT+TGG - chr3_3:60215112-60215131 None:intergenic 25.0%
!!! CCTATCAGTTTTAACTATAT+TGG - chr3_3:60215197-60215216 None:intergenic 25.0%
! CCAATATAGTTAAAACTGAT+AGG + chr3_3:60215194-60215213 Msa0461730:intron 25.0%
!! TTTTTCATTCCATCCAATTT+GGG - chr3_3:60215681-60215700 None:intergenic 25.0%
!! ATTTTTCATTCCATCCAATT+TGG - chr3_3:60215682-60215701 None:intergenic 25.0%
! ATGGAATGAAAAATAAGAAG+TGG + chr3_3:60215688-60215707 Msa0461730:intron 25.0%
! ATATTACAAATCCAAACAAC+GGG + chr3_3:60215760-60215779 Msa0461730:intron 25.0%
!!! CATATCAATTCTGAAATCTT+TGG - chr3_3:60216268-60216287 None:intergenic 25.0%
! TTTGGTCAATAAGAAAGAAA+TGG - chr3_3:60216365-60216384 None:intergenic 25.0%
TGAAACTCAGATTGAATTGA+AGG - chr3_3:60207555-60207574 None:intergenic 30.0%
TTCTTCTTCAAGTAGTCTAA+CGG + chr3_3:60207726-60207745 Msa0461730:intron 30.0%
! ATGTGAATAATTAGAGCGTT+TGG + chr3_3:60207769-60207788 Msa0461730:intron 30.0%
GTTATTATATGCAGGAACTA+GGG - chr3_3:60207803-60207822 None:intergenic 30.0%
AGTTATTATATGCAGGAACT+AGG - chr3_3:60207804-60207823 None:intergenic 30.0%
TAAAGGAAGACTATGATTGA+AGG + chr3_3:60208198-60208217 Msa0461730:intron 30.0%
! TGTTATTTGAACAGCCAATT+TGG + chr3_3:60208226-60208245 Msa0461730:intron 30.0%
TGCAAAGAAAAAGTAGGTAT+TGG + chr3_3:60208276-60208295 Msa0461730:intron 30.0%
GATATATGAACATCCATTTG+GGG - chr3_3:60208378-60208397 None:intergenic 30.0%
TGTTGGCAAAAATTATAGAC+AGG - chr3_3:60208432-60208451 None:intergenic 30.0%
AGAGAAAGAAGTTAAACTGT+TGG - chr3_3:60208449-60208468 None:intergenic 30.0%
!! TTCTAATTTTGGCATTGAGA+GGG - chr3_3:60208472-60208491 None:intergenic 30.0%
!! TTTCTAATTTTGGCATTGAG+AGG - chr3_3:60208473-60208492 None:intergenic 30.0%
!!! TCCATTTTTTTTTCTTCCAG+AGG + chr3_3:60208824-60208843 Msa0461730:intron 30.0%
! TCCTCTGGAAGAAAAAAAAA+TGG - chr3_3:60208828-60208847 None:intergenic 30.0%
AGGAAAATGGAAAGAAGTTA+AGG + chr3_3:60208872-60208891 Msa0461730:CDS 30.0%
ATAGAGATCAACAAAAGTAG+AGG + chr3_3:60208930-60208949 Msa0461730:CDS 30.0%
TCTTAACTCACAAAAATGTG+TGG + chr3_3:60209018-60209037 Msa0461730:CDS 30.0%
CTTAACTCACAAAAATGTGT+GGG + chr3_3:60209019-60209038 Msa0461730:CDS 30.0%
GAATGTATCATAGGAAAAGA+TGG + chr3_3:60209116-60209135 Msa0461730:CDS 30.0%
!! ATTGACATTGATAACGAGAA+TGG + chr3_3:60209155-60209174 Msa0461730:CDS 30.0%
GAGTTAAAATGTAGTTATGG+TGG + chr3_3:60209239-60209258 Msa0461730:CDS 30.0%
ACAATGCTCAAATAAGCTAA+TGG + chr3_3:60209440-60209459 Msa0461730:intron 30.0%
!! ATGGTTTGTTTAACAACCTT+AGG + chr3_3:60209459-60209478 Msa0461730:intron 30.0%
!! TGGTTTGTTTAACAACCTTA+GGG + chr3_3:60209460-60209479 Msa0461730:intron 30.0%
TTTCCTTTCTTAATTCCCTA+AGG - chr3_3:60209478-60209497 None:intergenic 30.0%
TTTCTTTAACTAGTGCTCTA+AGG + chr3_3:60209769-60209788 Msa0461730:intron 30.0%
! TTTTGAATGACGATAAGATC+AGG - chr3_3:60209869-60209888 None:intergenic 30.0%
ATCGTCATTCAAAACAAACT+TGG + chr3_3:60209875-60209894 Msa0461730:intron 30.0%
ATTATTGTCTTGGGAACATA+TGG + chr3_3:60210047-60210066 Msa0461730:intron 30.0%
TTAGTTACCTGAAGTTTGAT+TGG + chr3_3:60210142-60210161 Msa0461730:intron 30.0%
TTGATATCCAATCAAACTTC+AGG - chr3_3:60210152-60210171 None:intergenic 30.0%
TTGATTGGATATCAATACTC+TGG + chr3_3:60210157-60210176 Msa0461730:intron 30.0%
!!! ACTGTCGCTTTAGTATTTTA+AGG + chr3_3:60210776-60210795 Msa0461730:intron 30.0%
!!! CTGTCGCTTTAGTATTTTAA+GGG + chr3_3:60210777-60210796 Msa0461730:intron 30.0%
CAAAATTAAGGCTTCAACTA+TGG - chr3_3:60211058-60211077 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr3_3:60211356-60211375 None:intergenic 30.0%
AGACGACTCTTAAAAAAGAA+TGG + chr3_3:60211567-60211586 Msa0461730:intron 30.0%
GACTCTTAAAAAAGAATGGA+GGG + chr3_3:60211571-60211590 Msa0461730:intron 30.0%
AACTAGTATTGCATAAAGAG+CGG + chr3_3:60211610-60211629 Msa0461730:intron 30.0%
AACAAGCCTTAAAAGGAAAA+AGG - chr3_3:60211716-60211735 None:intergenic 30.0%
ATGAAGCAATCGAATATTGT+CGG + chr3_3:60211927-60211946 Msa0461730:CDS 30.0%
TGCTTAGCAAAACTTATAAG+TGG - chr3_3:60212043-60212062 None:intergenic 30.0%
!!! GATATTTTTTCTATTTGGCC+AGG + chr3_3:60212141-60212160 Msa0461730:intron 30.0%
!! GATTTTTCAAAATCCAAGGT+AGG - chr3_3:60212384-60212403 None:intergenic 30.0%
!! CCTTTTTGATTCTCAAAATG+AGG - chr3_3:60212524-60212543 None:intergenic 30.0%
!! CCTCATTTTGAGAATCAAAA+AGG + chr3_3:60212521-60212540 Msa0461730:intron 30.0%
! TTTTGCAGGATCTAAAGATA+TGG + chr3_3:60212625-60212644 Msa0461730:intron 30.0%
TTTGCAGGATCTAAAGATAT+GGG + chr3_3:60212626-60212645 Msa0461730:intron 30.0%
TTTGTATACATCTATACCCT+TGG + chr3_3:60212725-60212744 Msa0461730:intron 30.0%
TTTAAAGAATGAGGTCAACT+AGG - chr3_3:60212778-60212797 None:intergenic 30.0%
CCCCAAATAAAAAAAATGTC+TGG - chr3_3:60212918-60212937 None:intergenic 30.0%
TCAACTCTTGGACATATTTA+CGG + chr3_3:60213036-60213055 Msa0461730:intron 30.0%
AATCCTTATGAATCGTACTT+GGG + chr3_3:60213061-60213080 Msa0461730:intron 30.0%
TGAATCAGATACCTTGATTT+GGG - chr3_3:60213144-60213163 None:intergenic 30.0%
ATGAATCAGATACCTTGATT+TGG - chr3_3:60213145-60213164 None:intergenic 30.0%
! AGGTATCTGATTCATTTTAG+TGG + chr3_3:60213150-60213169 Msa0461730:intron 30.0%
! GTCATTTCGATTTGATCATA+AGG + chr3_3:60213234-60213253 Msa0461730:intron 30.0%
! CATTTCGATTTGATCATAAG+GGG + chr3_3:60213236-60213255 Msa0461730:intron 30.0%
TGATCATAAGGGGTTATATA+TGG + chr3_3:60213246-60213265 Msa0461730:intron 30.0%
GATCATAAGGGGTTATATAT+GGG + chr3_3:60213247-60213266 Msa0461730:intron 30.0%
AACGGTTGTAAAACAATCAT+TGG - chr3_3:60213558-60213577 None:intergenic 30.0%
TCACTTGAGTTCTTCAAAAA+CGG - chr3_3:60213576-60213595 None:intergenic 30.0%
! TGATCGTAAGAAAGCAATTT+TGG + chr3_3:60213945-60213964 Msa0461730:CDS 30.0%
AAATGGCATAGTTGAAATAG+TGG + chr3_3:60213999-60214018 Msa0461730:CDS 30.0%
! ATTTGATGATCTAATCCAAG+GGG + chr3_3:60214167-60214186 Msa0461730:CDS 30.0%
AAATGATGTGGCATATCAAA+TGG + chr3_3:60214271-60214290 Msa0461730:CDS 30.0%
! CATCGAATTTTAAATTGCGA+CGG - chr3_3:60214329-60214348 None:intergenic 30.0%
ATTTACAGTCACAATATCAG+TGG - chr3_3:60214438-60214457 None:intergenic 30.0%
CTGTAAATGTGTTTGCAATT+TGG + chr3_3:60214450-60214469 Msa0461730:intron 30.0%
!! CTATTGATTGGTTTGGATTT+GGG - chr3_3:60214493-60214512 None:intergenic 30.0%
!! ACTATTGATTGGTTTGGATT+TGG - chr3_3:60214494-60214513 None:intergenic 30.0%
! TCAAAGACTATTGATTGGTT+TGG - chr3_3:60214500-60214519 None:intergenic 30.0%
!!! CGTCTCTCGTATTTTTTTAT+GGG - chr3_3:60214558-60214577 None:intergenic 30.0%
!!! TCGTCTCTCGTATTTTTTTA+TGG - chr3_3:60214559-60214578 None:intergenic 30.0%
TATGAAGAAAAATATCCTCC+GGG - chr3_3:60214584-60214603 None:intergenic 30.0%
!!! GGAGGTATTTGTGTATTTTT+CGG + chr3_3:60214751-60214770 Msa0461730:intron 30.0%
!! GAGGTATTTGTGTATTTTTC+GGG + chr3_3:60214752-60214771 Msa0461730:intron 30.0%
ATTGATGAAATACAATGGAG+CGG + chr3_3:60214942-60214961 Msa0461730:intron 30.0%
AAAATTTCCACTCCATTGTT+TGG + chr3_3:60215048-60215067 Msa0461730:intron 30.0%
TCCATTGTTTGGTAAATCAA+TGG + chr3_3:60215059-60215078 Msa0461730:intron 30.0%
!! TCCATTGATTTACCAAACAA+TGG - chr3_3:60215063-60215082 None:intergenic 30.0%
!!! CATTGTGAGTTTGTTTTGTA+AGG - chr3_3:60215345-60215364 None:intergenic 30.0%
GAATGAAAAATAAGAAGTGG+TGG + chr3_3:60215691-60215710 Msa0461730:intron 30.0%
AAAATAAGAAGTGGTGGTAT+AGG + chr3_3:60215697-60215716 Msa0461730:intron 30.0%
TATTACAAATCCAAACAACG+GGG + chr3_3:60215761-60215780 Msa0461730:intron 30.0%
TGACAATCATTTCAACTTTC+AGG - chr3_3:60215833-60215852 None:intergenic 30.0%
TTTGCTTTGTCTTCAGTAAT+TGG + chr3_3:60216180-60216199 Msa0461730:CDS 30.0%
ATTTCAGAATTGATATGCCA+AGG + chr3_3:60216271-60216290 Msa0461730:CDS 30.0%
! ACACAATGTGCTTGTATTTT+TGG - chr3_3:60216383-60216402 None:intergenic 30.0%
CTAAGAAGATCAATGTAAAG+TGG - chr3_3:60216462-60216481 None:intergenic 30.0%
TGATGAAGTGAAAATGTGTT+TGG + chr3_3:60216541-60216560 Msa0461730:three_prime_UTR 30.0%
ATAACAGTACTACCTATGTT+TGG + chr3_3:60216576-60216595 Msa0461730:three_prime_UTR 30.0%
ATATGTATGATGTTGGATTG+TGG + chr3_3:60216640-60216659 Msa0461730:three_prime_UTR 30.0%
CTCGGTAAGTTATTATATGC+AGG - chr3_3:60207811-60207830 None:intergenic 35.0%
AATCTTTATCGGATACAGGT+GGG - chr3_3:60207947-60207966 None:intergenic 35.0%
TAATCTTTATCGGATACAGG+TGG - chr3_3:60207948-60207967 None:intergenic 35.0%
GACTAATCTTTATCGGATAC+AGG - chr3_3:60207951-60207970 None:intergenic 35.0%
!! AGAAAAAGTAGGTATTGGCA+CGG + chr3_3:60208281-60208300 Msa0461730:intron 35.0%
! CTCACTCAAACAAGTGTTTT+TGG - chr3_3:60208607-60208626 None:intergenic 35.0%
CTAAGGGGATATACATTAGA+AGG + chr3_3:60208852-60208871 Msa0461730:CDS 35.0%
GGAAGTTGTTAAAAGTCTTG+TGG + chr3_3:60208989-60209008 Msa0461730:CDS 35.0%
TCATAGGAAAAGATGGTGAA+AGG + chr3_3:60209123-60209142 Msa0461730:CDS 35.0%
CAACCTTAGGGAATTAAGAA+AGG + chr3_3:60209472-60209491 Msa0461730:intron 35.0%
TCATGCTAATTAGTGTCTCT+TGG + chr3_3:60209577-60209596 Msa0461730:intron 35.0%
CATGCTAATTAGTGTCTCTT+GGG + chr3_3:60209578-60209597 Msa0461730:intron 35.0%
AAAGCGGATACAAGATGATA+TGG + chr3_3:60209942-60209961 Msa0461730:intron 35.0%
ATATGATACGTATCTGACAC+CGG - chr3_3:60210693-60210712 None:intergenic 35.0%
!!! CAATTTTTTTTTGTGGTGGC+CGG + chr3_3:60211285-60211304 Msa0461730:intron 35.0%
!!! AATTTTTTTTTGTGGTGGCC+GGG + chr3_3:60211286-60211305 Msa0461730:intron 35.0%
!!! CCTTTTTTTTTTGTGATGGC+CGG + chr3_3:60211316-60211335 Msa0461730:intron 35.0%
!!! CTTTTTTTTTTGTGATGGCC+GGG + chr3_3:60211317-60211336 Msa0461730:intron 35.0%
!!! TTTTTTTTTTGTGATGGCCG+GGG + chr3_3:60211318-60211337 Msa0461730:intron 35.0%
GCATAATATATGCAAGGTTC+TGG - chr3_3:60211350-60211369 None:intergenic 35.0%
GCAACACCAAATTATGAAAG+TGG - chr3_3:60211540-60211559 None:intergenic 35.0%
CGACTCTTAAAAAAGAATGG+AGG + chr3_3:60211570-60211589 Msa0461730:intron 35.0%
! GCCTATCCTTTTTCCTTTTA+AGG + chr3_3:60211707-60211726 Msa0461730:intron 35.0%
GCCTTAAAAGGAAAAAGGAT+AGG - chr3_3:60211711-60211730 None:intergenic 35.0%
TCAAGTCAACAAGCCTTAAA+AGG - chr3_3:60211723-60211742 None:intergenic 35.0%
TGTTATGACACCCTATCAAA+AGG + chr3_3:60211878-60211897 Msa0461730:intron 35.0%
GATTGCTTCATCAACGTTTA+GGG - chr3_3:60211918-60211937 None:intergenic 35.0%
TTCTTTGGACATGATTCTTG+TGG - chr3_3:60211971-60211990 None:intergenic 35.0%
ACTACTTCTAATGCTGCAAA+TGG + chr3_3:60212082-60212101 Msa0461730:CDS 35.0%
!! TCTGAAGTAGATAAGGGTTT+TGG + chr3_3:60212165-60212184 Msa0461730:intron 35.0%
! CTGAAGTAGATAAGGGTTTT+GGG + chr3_3:60212166-60212185 Msa0461730:intron 35.0%
! TGAAGTAGATAAGGGTTTTG+GGG + chr3_3:60212167-60212186 Msa0461730:intron 35.0%
TGCTTTCTTGTGAAGGAAAT+TGG - chr3_3:60212455-60212474 None:intergenic 35.0%
!! ATTTTCTCTAAGGAGAGACA+TGG + chr3_3:60212486-60212505 Msa0461730:intron 35.0%
TGAGAATCAAAAAGGCAGTA+TGG + chr3_3:60212529-60212548 Msa0461730:intron 35.0%
ATATGGGAGAGAAAGACAAA+GGG + chr3_3:60212642-60212661 Msa0461730:CDS 35.0%
AAAACTATGCCACATGTCTT+TGG + chr3_3:60212693-60212712 Msa0461730:intron 35.0%
CTTCAAAAACCAAAGACATG+TGG - chr3_3:60212705-60212724 None:intergenic 35.0%
! AGATGAAGCAAAAGCACAAA+TGG + chr3_3:60213008-60213027 Msa0461730:intron 35.0%
GAATCCTTATGAATCGTACT+TGG + chr3_3:60213060-60213079 Msa0461730:intron 35.0%
!! AAATGGGTTTTGCTAACCAA+TGG - chr3_3:60213488-60213507 None:intergenic 35.0%
! TCTTATCCTTCTGATTTTCC+GGG - chr3_3:60213721-60213740 None:intergenic 35.0%
! GTCTTATCCTTCTGATTTTC+CGG - chr3_3:60213722-60213741 None:intergenic 35.0%
! CAAGTTTTGCAGAAGTCTTT+GGG - chr3_3:60213822-60213841 None:intergenic 35.0%
! TCAAGTTTTGCAGAAGTCTT+TGG - chr3_3:60213823-60213842 None:intergenic 35.0%
! ACTTGAACGTGAAGCAATTT+TGG + chr3_3:60213837-60213856 Msa0461730:CDS 35.0%
TTTCTTGCTGCAGTCAAAAT+TGG - chr3_3:60213982-60214001 None:intergenic 35.0%
!!! ATTTTGACTGCAGCAAGAAA+TGG + chr3_3:60213982-60214001 Msa0461730:CDS 35.0%
TTAAGGTCGTATATGGAACT+TGG - chr3_3:60214045-60214064 None:intergenic 35.0%
TTCCATATACGACCTTAACT+TGG + chr3_3:60214047-60214066 Msa0461730:CDS 35.0%
TTCCAAGTTAAGGTCGTATA+TGG - chr3_3:60214052-60214071 None:intergenic 35.0%
TACTTGTAGCAGTTGAGAAT+AGG + chr3_3:60214085-60214104 Msa0461730:CDS 35.0%
!!! ATGCATTATTTTGGACTGTC+TGG - chr3_3:60214365-60214384 None:intergenic 35.0%
ACTGCTCAAAGACTATTGAT+TGG - chr3_3:60214505-60214524 None:intergenic 35.0%
TCAGCCAAAAGAGATATTGA+GGG + chr3_3:60214628-60214647 Msa0461730:intron 35.0%
AAATTTGCCCTTCCATTGTT+TGG + chr3_3:60215003-60215022 Msa0461730:intron 35.0%
TGATTTACCAAACAATGGAG+TGG - chr3_3:60215058-60215077 None:intergenic 35.0%
!! ATAAGTACTGAGATTATGCG+AGG - chr3_3:60215296-60215315 None:intergenic 35.0%
TCGCATAATCTCAGTACTTA+TGG + chr3_3:60215295-60215314 Msa0461730:intron 35.0%
AAAAGGAGAAGAGGAAGATA+AGG + chr3_3:60215584-60215603 Msa0461730:intron 35.0%
TTTGGATTGATGGAATGTGA+TGG - chr3_3:60215805-60215824 None:intergenic 35.0%
TTCAACTTTCAGGCTATGTT+TGG - chr3_3:60215823-60215842 None:intergenic 35.0%
TGTCATTGATAGAATCTCTC+TGG + chr3_3:60215848-60215867 Msa0461730:intron 35.0%
CACATGGATCAGTATACTAA+AGG + chr3_3:60215910-60215929 Msa0461730:intron 35.0%
AACAAAGATGACAAAACAGC+TGG + chr3_3:60215964-60215983 Msa0461730:CDS 35.0%
CAAGAAATCACATGAAGAAC+TGG + chr3_3:60215996-60216015 Msa0461730:CDS 35.0%
CATGAAGAACTGGTAACAAA+AGG + chr3_3:60216006-60216025 Msa0461730:CDS 35.0%
TGGTAACAAAAGGTAGTGAA+TGG + chr3_3:60216016-60216035 Msa0461730:CDS 35.0%
AAAGCAAATGCATCAAATGC+AGG - chr3_3:60216168-60216187 None:intergenic 35.0%
!! TTCTTTTCGAGAAGTGAGTA+TGG - chr3_3:60216244-60216263 None:intergenic 35.0%
! TATGCCAAGGAAACTTCTTT+TGG + chr3_3:60216284-60216303 Msa0461730:CDS 35.0%
! ATGCCAAGGAAACTTCTTTT+GGG + chr3_3:60216285-60216304 Msa0461730:CDS 35.0%
AATCCCAAAAGAAGTTTCCT+TGG - chr3_3:60216291-60216310 None:intergenic 35.0%
AGCAAGTGACTGAATAAATG+AGG - chr3_3:60216407-60216426 None:intergenic 35.0%
CTATTGCATACAAAGTCACA+GGG - chr3_3:60216431-60216450 None:intergenic 35.0%
ATAAGGGGGAGGAAATATAA+AGG + chr3_3:60216514-60216533 Msa0461730:CDS 35.0%
AAGTATACTGCTCCAAACAT+AGG - chr3_3:60216591-60216610 None:intergenic 35.0%
AGGAAGACTATGATTGAAGG+AGG + chr3_3:60208201-60208220 Msa0461730:intron 40.0%
CCTTTCTCTCTCTATTGCTA+TGG - chr3_3:60208310-60208329 None:intergenic 40.0%
CCATAGCAATAGAGAGAGAA+AGG + chr3_3:60208307-60208326 Msa0461730:intron 40.0%
TCACAAAAGTTGTCCCCAAA+TGG + chr3_3:60208362-60208381 Msa0461730:intron 40.0%
GTATTCTTCATTGTGCCATC+CGG + chr3_3:60209300-60209319 Msa0461730:CDS 40.0%
ACCAAAAAATTCTCTCCGGA+TGG - chr3_3:60209318-60209337 None:intergenic 40.0%
CTAGTAGCAAGAAGTTTGAG+AGG - chr3_3:60209908-60209927 None:intergenic 40.0%
CTCTCAAACTTCTTGCTACT+AGG + chr3_3:60209906-60209925 Msa0461730:intron 40.0%
!! CATCTTGTATCCGCTTTTGA+AGG - chr3_3:60209939-60209958 None:intergenic 40.0%
GAAATGTTGCACACTTACAG+TGG - chr3_3:60209985-60210004 None:intergenic 40.0%
CAAGCGTTATCCAGAATGAT+TGG - chr3_3:60210239-60210258 None:intergenic 40.0%
TAAATCTGTGCCAGCAATCA+CGG - chr3_3:60210298-60210317 None:intergenic 40.0%
TATGAAGCACATACACTCCT+CGG + chr3_3:60210656-60210675 Msa0461730:intron 40.0%
! GTAATCATATGTGTCGGTGT+CGG - chr3_3:60210716-60210735 None:intergenic 40.0%
CCGGCCATCACAAAAAAAAA+AGG - chr3_3:60211319-60211338 None:intergenic 40.0%
CGATTGCTTCATCAACGTTT+AGG - chr3_3:60211919-60211938 None:intergenic 40.0%
TAACATGTGTCGCAGTTCTT+TGG - chr3_3:60211986-60212005 None:intergenic 40.0%
TGAAGATCACATCGCAAATG+CGG + chr3_3:60212287-60212306 Msa0461730:intron 40.0%
ATTGAACATCTGACCTACCT+TGG + chr3_3:60212368-60212387 Msa0461730:intron 40.0%
AATTGGAGTCTGAGTCCAAA+TGG - chr3_3:60212438-60212457 None:intergenic 40.0%
GATATGGGAGAGAAAGACAA+AGG + chr3_3:60212641-60212660 Msa0461730:CDS 40.0%
ATCTGAATGCAAGCTTCTTC+CGG + chr3_3:60212670-60212689 Msa0461730:CDS 40.0%
! AGACATGTGGCATAGTTTTC+CGG - chr3_3:60212692-60212711 None:intergenic 40.0%
! AAGCAAAAGCACAAATGGAG+TGG + chr3_3:60213013-60213032 Msa0461730:intron 40.0%
GTTCCCAAGTACGATTCATA+AGG - chr3_3:60213067-60213086 None:intergenic 40.0%
TATGAATCGTACTTGGGAAC+CGG + chr3_3:60213067-60213086 Msa0461730:intron 40.0%
! ACTCACATCTCCTATTGGTT+TGG - chr3_3:60213095-60213114 None:intergenic 40.0%
AAACCAATAGGAGATGTGAG+TGG + chr3_3:60213094-60213113 Msa0461730:intron 40.0%
TCTGCTTACAACCCAAATCA+AGG + chr3_3:60213130-60213149 Msa0461730:intron 40.0%
ATTCCTTAACCATTGCCGTA+AGG + chr3_3:60213462-60213481 Msa0461730:intron 40.0%
! TTTGCTAACCAATGGCCTTA+CGG - chr3_3:60213480-60213499 None:intergenic 40.0%
! CTTATCCTTCTGATTTTCCG+GGG - chr3_3:60213720-60213739 None:intergenic 40.0%
TGCAGGAGATAACAACAATG+AGG + chr3_3:60213795-60213814 Msa0461730:intron 40.0%
CTACCAAAAGTGATCGAGAT+TGG + chr3_3:60214226-60214245 Msa0461730:CDS 40.0%
! GTTCCAATCTCGATCACTTT+TGG - chr3_3:60214232-60214251 None:intergenic 40.0%
GATCGAGATTGGAACATATC+TGG + chr3_3:60214237-60214256 Msa0461730:CDS 40.0%
GATATGCCACATCATTTGCA+AGG - chr3_3:60214268-60214287 None:intergenic 40.0%
GTGGCATATCAAATGGTTTC+AGG + chr3_3:60214278-60214297 Msa0461730:CDS 40.0%
!! GATTGGTTTGGATTTGGGTT+TGG - chr3_3:60214488-60214507 None:intergenic 40.0%
! GTCTTTGAGCAGTTCTTTTC+AGG + chr3_3:60214512-60214531 Msa0461730:intron 40.0%
TATGGGTCTAAGAGACATTG+TGG - chr3_3:60214541-60214560 None:intergenic 40.0%
CTCAGCCAAAAGAGATATTG+AGG + chr3_3:60214627-60214646 Msa0461730:intron 40.0%
! TAGGCCCTCAATATCTCTTT+TGG - chr3_3:60214635-60214654 None:intergenic 40.0%
!!! GTATTTTTCGGGTGTGAATG+AGG + chr3_3:60214763-60214782 Msa0461730:intron 40.0%
AAAACCAACCCGATCATGAA+TGG + chr3_3:60214836-60214855 Msa0461730:intron 40.0%
AAACCAACCCGATCATGAAT+GGG + chr3_3:60214837-60214856 Msa0461730:intron 40.0%
AATCCAACCCATTCATGATC+GGG - chr3_3:60214847-60214866 None:intergenic 40.0%
CAATCCAACCCATTCATGAT+CGG - chr3_3:60214848-60214867 None:intergenic 40.0%
AATCCAACCCATTCATGATC+GGG - chr3_3:60214847-60214866 None:intergenic 40.0%
CAATCCAACCCATTCATGAT+CGG - chr3_3:60214848-60214867 None:intergenic 40.0%
!! GATCATGAATGGGTTGGATT+GGG + chr3_3:60214847-60214866 Msa0461730:intron 40.0%
! TGGAACATAGTGGAATGGAA+TGG + chr3_3:60214972-60214991 Msa0461730:intron 40.0%
! CATAGTGGAATGGAATGGAA+CGG + chr3_3:60214977-60214996 Msa0461730:intron 40.0%
CTGATAGGTTCAACAATGTC+AGG + chr3_3:60215209-60215228 Msa0461730:intron 40.0%
GATTATGCGAGGATGTAGAT+TGG - chr3_3:60215285-60215304 None:intergenic 40.0%
TGCAGACAAAAAAGGAGAAG+AGG + chr3_3:60215575-60215594 Msa0461730:intron 40.0%
TTCATTCCATCCAATTTGGG+AGG - chr3_3:60215678-60215697 None:intergenic 40.0%
TAAGAAGTGGTGGTATAGGA+TGG + chr3_3:60215701-60215720 Msa0461730:intron 40.0%
TGGAATGAGATGGAACATGA+TGG - chr3_3:60215735-60215754 None:intergenic 40.0%
! TTGATGGAATGTGATGGAGT+GGG - chr3_3:60215799-60215818 None:intergenic 40.0%
! ATTGATGGAATGTGATGGAG+TGG - chr3_3:60215800-60215819 None:intergenic 40.0%
TCAGGCTATGTTTGGATTGA+TGG - chr3_3:60215815-60215834 None:intergenic 40.0%
GTGCGCAAAAGTAGTTAGAA+GGG - chr3_3:60215893-60215912 None:intergenic 40.0%
TGTGCGCAAAAGTAGTTAGA+AGG - chr3_3:60215894-60215913 None:intergenic 40.0%
!! TCTAACTACTTTTGCGCACA+TGG + chr3_3:60215894-60215913 Msa0461730:intron 40.0%
TACTACAGAGCAAGATTCAG+AGG - chr3_3:60216052-60216071 None:intergenic 40.0%
AGCGACGAACATTGCAATAA+TGG - chr3_3:60216331-60216350 None:intergenic 40.0%
GCTATTGCATACAAAGTCAC+AGG - chr3_3:60216432-60216451 None:intergenic 40.0%
ATCACTTGTCTTTGGCACTT+TGG - chr3_3:60216496-60216515 None:intergenic 40.0%
AGTGCCAAAGACAAGTGATA+AGG + chr3_3:60216497-60216516 Msa0461730:CDS 40.0%
GTGCCAAAGACAAGTGATAA+GGG + chr3_3:60216498-60216517 Msa0461730:CDS 40.0%
TGCCAAAGACAAGTGATAAG+GGG + chr3_3:60216499-60216518 Msa0461730:CDS 40.0%
AGTGTTCGTCATGGTCTTCA+AGG - chr3_3:60207579-60207598 None:intergenic 45.0%
CACATCTCTAGTGTTCGTCA+TGG - chr3_3:60207588-60207607 None:intergenic 45.0%
CATGACGAACACTAGAGATG+TGG + chr3_3:60207586-60207605 Msa0461730:exon 45.0%
TACCGAGTGAGTTAAGCTCA+CGG + chr3_3:60207824-60207843 Msa0461730:intron 45.0%
TTCTTCCAGAGGACAAGCTA+AGG + chr3_3:60208835-60208854 Msa0461730:intron 45.0%
TCTTCCAGAGGACAAGCTAA+GGG + chr3_3:60208836-60208855 Msa0461730:intron 45.0%
CTACACGTGGCAGTAAATGA+TGG + chr3_3:60208960-60208979 Msa0461730:CDS 45.0%
GGCAGTAAATGATGGCAATG+AGG + chr3_3:60208968-60208987 Msa0461730:CDS 45.0%
TGAATCCTCTTGATGCTGCA+AGG - chr3_3:60209085-60209104 None:intergenic 45.0%
GACAATGCAGCAAGGAACAA+GGG - chr3_3:60209188-60209207 None:intergenic 45.0%
AGACAATGCAGCAAGGAACA+AGG - chr3_3:60209189-60209208 None:intergenic 45.0%
TGTTCCTTGCTGCATTGTCT+TGG + chr3_3:60209189-60209208 Msa0461730:CDS 45.0%
TTTGCCAAGACAATGCAGCA+AGG - chr3_3:60209196-60209215 None:intergenic 45.0%
!!! GCCATCCGGAGAGAATTTTT+TGG + chr3_3:60209314-60209333 Msa0461730:CDS 45.0%
!! TATCCGCTTTTGAAGGCTGA+GGG - chr3_3:60209932-60209951 None:intergenic 45.0%
GCGGATACAAGATGATATGG+TGG + chr3_3:60209945-60209964 Msa0461730:intron 45.0%
CGCTTTACGTCCAATCATTC+TGG + chr3_3:60210226-60210245 Msa0461730:intron 45.0%
GTCTATCTTACCGTGATTGC+TGG + chr3_3:60210285-60210304 Msa0461730:intron 45.0%
! CGCGGGTATACCTTTTGATA+GGG - chr3_3:60211891-60211910 None:intergenic 45.0%
! CCTATCAAAAGGTATACCCG+CGG + chr3_3:60211889-60211908 Msa0461730:intron 45.0%
! CTATCAAAAGGTATACCCGC+GGG + chr3_3:60211890-60211909 Msa0461730:intron 45.0%
! CCAGGGTCTGAAGTAGATAA+GGG + chr3_3:60212159-60212178 Msa0461730:intron 45.0%
CTTCAATCACAACTGCATCG+TGG - chr3_3:60212272-60212291 None:intergenic 45.0%
GCTATGGTGCTTTCTTGTGA+AGG - chr3_3:60212462-60212481 None:intergenic 45.0%
GGAAGAAGCTTGCATTCAGA+TGG - chr3_3:60212671-60212690 None:intergenic 45.0%
! ATCTATACCCTTGGCCTTTC+AGG + chr3_3:60212734-60212753 Msa0461730:intron 45.0%
GACACTTACCAACTCCTGAA+AGG - chr3_3:60212751-60212770 None:intergenic 45.0%
CAAATGGAGTGGTCAACTCT+TGG + chr3_3:60213024-60213043 Msa0461730:intron 45.0%
GTTCCACTCACATCTCCTAT+TGG - chr3_3:60213100-60213119 None:intergenic 45.0%
AGAATGCTAACTAGTGCCCT+TGG + chr3_3:60213332-60213351 Msa0461730:intron 45.0%
GAATGCTAACTAGTGCCCTT+GGG + chr3_3:60213333-60213352 Msa0461730:intron 45.0%
AATGCTAACTAGTGCCCTTG+GGG + chr3_3:60213334-60213353 Msa0461730:intron 45.0%
TACTCTAACCAATGCCCCAA+GGG - chr3_3:60213351-60213370 None:intergenic 45.0%
TAGTAACACGGAGATCAGTC+AGG - chr3_3:60213687-60213706 None:intergenic 45.0%
! TGACTGATCTCCGTGTTACT+AGG + chr3_3:60213686-60213705 Msa0461730:intron 45.0%
GGAAGGAAGTCCTAGTAACA+CGG - chr3_3:60213699-60213718 None:intergenic 45.0%
TAGGAGAACCAATGTCGTTG+AGG + chr3_3:60214104-60214123 Msa0461730:CDS 45.0%
CCTTAATGCCTCAACGACAT+TGG - chr3_3:60214115-60214134 None:intergenic 45.0%
! CCAATGTCGTTGAGGCATTA+AGG + chr3_3:60214112-60214131 Msa0461730:CDS 45.0%
TGATGATCTAATCCAAGGGG+TGG + chr3_3:60214170-60214189 Msa0461730:CDS 45.0%
TCTAATCCAAGGGGTGGATA+AGG + chr3_3:60214176-60214195 Msa0461730:CDS 45.0%
AAAATACGAGAGACGACTCC+CGG + chr3_3:60214563-60214582 Msa0461730:intron 45.0%
TTGGCTGAGTTATCTACCGA+AGG - chr3_3:60214616-60214635 None:intergenic 45.0%
AACGACAGTTAACTGCAGCT+GGG - chr3_3:60214678-60214697 None:intergenic 45.0%
AACTGCAGTTGACTGCAGTT+GGG - chr3_3:60214705-60214724 None:intergenic 45.0%
AACTGCAGTCAACTGCAGTT+GGG + chr3_3:60214705-60214724 Msa0461730:intron 45.0%
ACACAAATACCTCCAACTGC+AGG - chr3_3:60214745-60214764 None:intergenic 45.0%
!! CGATCATGAATGGGTTGGAT+TGG + chr3_3:60214846-60214865 Msa0461730:intron 45.0%
!! CGATCATGAATGGGTTGGAT+TGG + chr3_3:60214846-60214865 Msa0461730:intron 45.0%
TCAATCCAAACGGAACCTCA+AGG - chr3_3:60214927-60214946 None:intergenic 45.0%
TGAAATACAATGGAGCGGAG+CGG + chr3_3:60214947-60214966 Msa0461730:intron 45.0%
TTGGGAGGTAGACAATGGAA+TGG - chr3_3:60215663-60215682 None:intergenic 45.0%
CCAATTTGGGAGGTAGACAA+TGG - chr3_3:60215668-60215687 None:intergenic 45.0%
CCATTGTCTACCTCCCAAAT+TGG + chr3_3:60215665-60215684 Msa0461730:intron 45.0%
TGTCTACCTCCCAAATTGGA+TGG + chr3_3:60215669-60215688 Msa0461730:intron 45.0%
AGTGGTGGTATAGGATGGAA+TGG + chr3_3:60215706-60215725 Msa0461730:intron 45.0%
GTTCTAACTGCGAAATGCTC+TGG - chr3_3:60215943-60215962 None:intergenic 45.0%
TGATGTAGCGAAGGAAACAC+CGG - chr3_3:60216088-60216107 None:intergenic 45.0%
TACAGTGCTTGATGTAGCGA+AGG - chr3_3:60216097-60216116 None:intergenic 45.0%
TGAAACAGGTGAACCAGCAT+TGG + chr3_3:60216134-60216153 Msa0461730:CDS 45.0%
TTCGAGAAGTGAGTATGGAC+AGG - chr3_3:60216239-60216258 None:intergenic 45.0%
!!! ATGTTCGTCGCTTTTTGCTC+TGG + chr3_3:60216339-60216358 Msa0461730:CDS 45.0%
GCCAAAGACAAGTGATAAGG+GGG + chr3_3:60216500-60216519 Msa0461730:CDS 45.0%
TCCCCCTTATCACTTGTCTT+TGG - chr3_3:60216504-60216523 None:intergenic 45.0%
AAAGACAAGTGATAAGGGGG+AGG + chr3_3:60216503-60216522 Msa0461730:CDS 45.0%
!!! AATTTTATACATATTAAATA+AGG + chr3_3:60207989-60208008 Msa0461730:intron 5.0%
!!! ATTTTATACATATTAAATAA+GGG + chr3_3:60207990-60208009 Msa0461730:intron 5.0%
GACAGCACACACATGACGAA+AGG + chr3_3:60207623-60207642 Msa0461730:CDS 50.0%
ACCGAGTGAGTTAAGCTCAC+GGG + chr3_3:60207825-60207844 Msa0461730:intron 50.0%
TCCCGTGAGCTTAACTCACT+CGG - chr3_3:60207829-60207848 None:intergenic 50.0%
GTGAGTTAAGCTCACGGGAA+CGG + chr3_3:60207830-60207849 Msa0461730:intron 50.0%
CTTCCAGAGGACAAGCTAAG+GGG + chr3_3:60208837-60208856 Msa0461730:intron 50.0%
!! TATCCCCTTAGCTTGTCCTC+TGG - chr3_3:60208843-60208862 None:intergenic 50.0%
TAGAGGAACAGCACTACACG+TGG + chr3_3:60208947-60208966 Msa0461730:CDS 50.0%
CTTGATGCTGCAAGGTGCAA+AGG - chr3_3:60209077-60209096 None:intergenic 50.0%
TTGCACCTTGCAGCATCAAG+AGG + chr3_3:60209077-60209096 Msa0461730:CDS 50.0%
!! GTATCCGCTTTTGAAGGCTG+AGG - chr3_3:60209933-60209952 None:intergenic 50.0%
! GGACGTAAAGCGTCTGTAAG+TGG - chr3_3:60210218-60210237 None:intergenic 50.0%
GCACATACACTCCTCGGATT+AGG + chr3_3:60210662-60210681 Msa0461730:intron 50.0%
!! CAAGGTTCTGGTTCAAACCC+CGG - chr3_3:60211338-60211357 None:intergenic 50.0%
TGAGCTTAGCTCAGTTGGCA+GGG - chr3_3:60211378-60211397 None:intergenic 50.0%
! CCGCGGGTATACCTTTTGAT+AGG - chr3_3:60211892-60211911 None:intergenic 50.0%
! ATCAACGTTTAGGGTTCCCG+CGG - chr3_3:60211909-60211928 None:intergenic 50.0%
! GCCAGGGTCTGAAGTAGATA+AGG + chr3_3:60212158-60212177 Msa0461730:intron 50.0%
CCCTTATCTACTTCAGACCC+TGG - chr3_3:60212162-60212181 None:intergenic 50.0%
GGAGAGACATGGATAGAACG+AGG + chr3_3:60212497-60212516 Msa0461730:intron 50.0%
ACCAACTCCTGAAAGGCCAA+GGG - chr3_3:60212744-60212763 None:intergenic 50.0%
TACCAACTCCTGAAAGGCCA+AGG - chr3_3:60212745-60212764 None:intergenic 50.0%
!! ATCTCCTATTGGTTTGGCGC+CGG - chr3_3:60213089-60213108 None:intergenic 50.0%
GTACTCTAACCAATGCCCCA+AGG - chr3_3:60213352-60213371 None:intergenic 50.0%
! TGGCCTTACGGCAATGGTTA+AGG - chr3_3:60213468-60213487 None:intergenic 50.0%
AACCATTGCCGTAAGGCCAT+TGG + chr3_3:60213469-60213488 Msa0461730:intron 50.0%
! AACCAATGGCCTTACGGCAA+TGG - chr3_3:60213474-60213493 None:intergenic 50.0%
GTTACTAGGACTTCCTTCCC+CGG + chr3_3:60213700-60213719 Msa0461730:intron 50.0%
TCCTTCCCCGGAAAATCAGA+AGG + chr3_3:60213712-60213731 Msa0461730:intron 50.0%
! TCCTTCTGATTTTCCGGGGA+AGG - chr3_3:60213716-60213735 None:intergenic 50.0%
TCTCTTCCTTATCCACCCCT+TGG - chr3_3:60214185-60214204 None:intergenic 50.0%
GTGCTGCCTTGCAAATGATG+TGG + chr3_3:60214259-60214278 Msa0461730:CDS 50.0%
!! GGACTGTCTGGTCTTGATCA+AGG - chr3_3:60214353-60214372 None:intergenic 50.0%
!! CTGCAGCTGGGAGTATTATG+AGG - chr3_3:60214666-60214685 None:intergenic 50.0%
GAACGACAGTTAACTGCAGC+TGG - chr3_3:60214679-60214698 None:intergenic 50.0%
CAACTGCAGTTGACTGCAGT+TGG - chr3_3:60214706-60214725 None:intergenic 50.0%
CAACTGCAGTCAACTGCAGT+TGG + chr3_3:60214704-60214723 Msa0461730:intron 50.0%
ACTGCAGTCAACTGCAGTTG+GGG + chr3_3:60214706-60214725 Msa0461730:intron 50.0%
TCAACTGCAGTTGGGGTGAA+TGG + chr3_3:60214713-60214732 Msa0461730:intron 50.0%
GAATGGCAGTTACCTGCAGT+TGG + chr3_3:60214730-60214749 Msa0461730:intron 50.0%
CAACCCATTCATGATCGGGT+TGG - chr3_3:60214843-60214862 None:intergenic 50.0%
CAACCCGATCATGAATGGGT+TGG + chr3_3:60214841-60214860 Msa0461730:intron 50.0%
!! TGGATTGGCCCGATCATGAA+TGG + chr3_3:60214861-60214880 Msa0461730:intron 50.0%
!! GGATTGGCCCGATCATGAAT+GGG + chr3_3:60214862-60214881 Msa0461730:intron 50.0%
TCTCACCTTGAGGTTCCGTT+TGG + chr3_3:60214919-60214938 Msa0461730:intron 50.0%
! CGGAGTGGAACATAGTGGAA+TGG + chr3_3:60214967-60214986 Msa0461730:intron 50.0%
GGAGTCATATCCCCGTTGTT+TGG - chr3_3:60215774-60215793 None:intergenic 50.0%
! TGGAATGTGATGGAGTGGGA+TGG - chr3_3:60215795-60215814 None:intergenic 50.0%
! GCTACATCAAGCACTGTACC+AGG + chr3_3:60216099-60216118 Msa0461730:CDS 50.0%
! ACATCAAGCACTGTACCAGG+CGG + chr3_3:60216102-60216121 Msa0461730:CDS 50.0%
! ACAGGTGAACCAGCATTGGA+AGG + chr3_3:60216138-60216157 Msa0461730:CDS 50.0%
! GTGAACCAGCATTGGAAGGA+AGG + chr3_3:60216142-60216161 Msa0461730:CDS 50.0%
AGGCCCTCAGCCTTCAAAAG+CGG + chr3_3:60209926-60209945 Msa0461730:intron 55.0%
! CTCCTCGGATTAGGTGTGTC+CGG + chr3_3:60210671-60210690 Msa0461730:intron 55.0%
GTGAGCTTAGCTCAGTTGGC+AGG - chr3_3:60211379-60211398 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr3_3:60211383-60211402 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr3_3:60211380-60211399 Msa0461730:intron 55.0%
! TCAACGTTTAGGGTTCCCGC+GGG - chr3_3:60211908-60211927 None:intergenic 55.0%
CAACTGCATCGTGGCCTCAT+TGG - chr3_3:60212263-60212282 None:intergenic 55.0%
! ACCCTTGGCCTTTCAGGAGT+TGG + chr3_3:60212740-60212759 Msa0461730:intron 55.0%
AACTAGTGCCCTTGGGGCAT+TGG + chr3_3:60213340-60213359 Msa0461730:intron 55.0%
GCAGTTGACTGCAGTTGGGA+GGG - chr3_3:60214701-60214720 None:intergenic 55.0%
TGCAGTTGACTGCAGTTGGG+AGG - chr3_3:60214702-60214721 None:intergenic 55.0%
TGGCAGTTACCTGCAGTTGG+AGG + chr3_3:60214733-60214752 Msa0461730:intron 55.0%
TGGCCCGATCATGAATGGGT+TGG + chr3_3:60214866-60214885 Msa0461730:intron 55.0%
GAACGCCTAGTCTCACCTTG+AGG + chr3_3:60214909-60214928 Msa0461730:intron 55.0%
CGGAACCTCAAGGTGAGACT+AGG - chr3_3:60214917-60214936 None:intergenic 55.0%
GTAGTAGCAGCACTCCTTGC+CGG + chr3_3:60216066-60216085 Msa0461730:CDS 55.0%
TAGCGAAGGAAACACCGGCA+AGG - chr3_3:60216083-60216102 None:intergenic 55.0%
GTTTCACTTCTGTTGCCGCC+TGG - chr3_3:60216120-60216139 None:intergenic 55.0%
GGCGGCAACAGAAGTGAAAC+AGG + chr3_3:60216120-60216139 Msa0461730:CDS 55.0%
CACCGGACACACCTAATCCG+AGG - chr3_3:60210676-60210695 None:intergenic 60.0%
GGAACCGGCGCCAAACCAAT+AGG + chr3_3:60213082-60213101 Msa0461730:intron 60.0%
ATACGAGAGACGACTCCCGG+AGG + chr3_3:60214566-60214585 Msa0461730:intron 60.0%
TACAATGGAGCGGAGCGGAG+TGG + chr3_3:60214952-60214971 Msa0461730:intron 60.0%
CGGAGCGGAGTGGAACATAG+TGG + chr3_3:60214962-60214981 Msa0461730:intron 60.0%
GCAGGCCTTCCTTCCAATGC+TGG - chr3_3:60216150-60216169 None:intergenic 60.0%
GCGGTGCGATGTCGTAGCAG+AGG + chr3_3:60212306-60212325 Msa0461730:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 60207507 60216734 60207507 ID=Msa0461730;Name=Msa0461730
chr3_3 mRNA 60207507 60216734 60207507 ID=Msa0461730-mRNA-1;Parent=Msa0461730;Name=Msa0461730-mRNA-1;_AED=0.12;_eAED=0.12;_QI=80|0.6|0.66|1|1|1|6|201|645
chr3_3 exon 60207507 60207644 60207507 ID=Msa0461730-mRNA-1:exon:12560;Parent=Msa0461730-mRNA-1
chr3_3 exon 60208844 60209335 60208844 ID=Msa0461730-mRNA-1:exon:12561;Parent=Msa0461730-mRNA-1
chr3_3 exon 60211900 60212103 60211900 ID=Msa0461730-mRNA-1:exon:12562;Parent=Msa0461730-mRNA-1
chr3_3 exon 60212633 60212707 60212633 ID=Msa0461730-mRNA-1:exon:12563;Parent=Msa0461730-mRNA-1
chr3_3 exon 60213803 60214299 60213803 ID=Msa0461730-mRNA-1:exon:12564;Parent=Msa0461730-mRNA-1
chr3_3 exon 60215922 60216734 60215922 ID=Msa0461730-mRNA-1:exon:12565;Parent=Msa0461730-mRNA-1
chr3_3 five_prime_UTR 60207507 60207586 60207507 ID=Msa0461730-mRNA-1:five_prime_utr;Parent=Msa0461730-mRNA-1
chr3_3 CDS 60207587 60207644 60207587 ID=Msa0461730-mRNA-1:cds;Parent=Msa0461730-mRNA-1
chr3_3 CDS 60208844 60209335 60208844 ID=Msa0461730-mRNA-1:cds;Parent=Msa0461730-mRNA-1
chr3_3 CDS 60211900 60212103 60211900 ID=Msa0461730-mRNA-1:cds;Parent=Msa0461730-mRNA-1
chr3_3 CDS 60212633 60212707 60212633 ID=Msa0461730-mRNA-1:cds;Parent=Msa0461730-mRNA-1
chr3_3 CDS 60213803 60214299 60213803 ID=Msa0461730-mRNA-1:cds;Parent=Msa0461730-mRNA-1
chr3_3 CDS 60215922 60216533 60215922 ID=Msa0461730-mRNA-1:cds;Parent=Msa0461730-mRNA-1
chr3_3 three_prime_UTR 60216534 60216734 60216534 ID=Msa0461730-mRNA-1:three_prime_utr;Parent=Msa0461730-mRNA-1
Gene Sequence

>Msa0461730

ATGACGAACACTAGAGATGTGGAAGAATGTATTAATGACAGCACACACATGACGAAAGAGGACAAGCTAAGGGGATATACATTAGAAGGAAAATGGAAAGAAGTTAAGGAATTATACAAATCTGATCTTAATAACTTGAGCACAATAGAGATCAACAAAAGTAGAGGAACAGCACTACACGTGGCAGTAAATGATGGCAATGAGGAAGTTGTTAAAAGTCTTGTGGATTCAATCTTAACTCACAAAAATGTGTGGGCCCTTACATGTAAGAATGAAAAAGGTGACACTCCTTTGCACCTTGCAGCATCAAGAGGATTCAAAAATATATGTGAATGTATCATAGGAAAAGATGGTGAAAGGAAGTATTTGATTGACATTGATAACGAGAATGGAGAAACTCCCTTGTTCCTTGCTGCATTGTCTTGGCAAAAACAAACGTTTGTGTATCTCTTCGAGTTAAAATGTAGTTATGGTGGTTCTTATTCCAAAGATCTTATTCGAAAAAATGGGGATAGTATTCTTCATTGTGCCATCCGGAGAGAATTTTTTGGTATACCCGCGGGAACCCTAAACGTTGATGAAGCAATCGAATATTGTCGGCTGAAGCATGAGTCAAAACCACAAGAATCATGTCCAAAGAACTGCGACACATGTTATCTATTTATTGATAAATGTCGAGAATATGCTTATCCACTTATAAGTTTTGCTAAGCAAAAGCTGCAGAAGAAACAAACTACTTCTAATGCTGCAAATGGATCTAAAGATATGGGAGAGAAAGACAAAGGGTTACCATCTGAATGCAAGCTTCTTCCGGAAAACTATGCCACATATAACAACAATGAGGACCCAAAGACTTCTGCAAAACTTGAACGTGAAGCAATTTTGGAAAGTGAGACAACAATTTTGACTGCAGCAAGACTTATAAGTGAAGCAATTTCGAAAAGTCAGACATCAATTTTGACTGAAAATCTTGATCGTAAGAAAGCAATTTTGGAAAGTGAGACACCAATTTTGACTGCAGCAAGAAATGGCATAGTTGAAATAGTGGAAAAGCTTATAACAAAAATACCAAGTTCCATATACGACCTTAACTTGGAAAATAAAAATGTATTACTTGTAGCAGTTGAGAATAGGAGAACCAATGTCGTTGAGGCATTAAGGAAACGTTTTGACAAGTGCAATAAAATGGCAATATTTGATGATCTAATCCAAGGGGTGGATAAGGAAGAGAACACTGTGTTACATTTAGCAGCTACCAAAAGTGATCGAGATTGGAACATATCTGGTGCTGCCTTGCAAATGATGTGGCATATCAAATGGTTTCAGTATACTAAAGGACTAGTGCCAGAGCATTTCGCAGTTAGAACAAACAAAGATGACAAAACAGCTGGAGAATTGTTCAAGAAATCACATGAAGAACTGGTAACAAAAGGTAGTGAATGGCTCAAAGATACCTCTGAATCTTGCTCTGTAGTAGCAGCACTCCTTGCCGGTGTTTCCTTCGCTACATCAAGCACTGTACCAGGCGGCAACAGAAGTGAAACAGGTGAACCAGCATTGGAAGGAAGGCCTGCATTTGATGCATTTGCTTTGTCTTCAGTAATTGGTCTTTGTTTCTCTGTCACTGCACTCGTAATGTTCCTGTCCATACTCACTTCTCGAAAAGAAGCCAAAGATTTCAGAATTGATATGCCAAGGAAACTTCTTTTGGGATTAAGTTCTCTTTTCTTATCCATTATTGCAATGTTCGTCGCTTTTTGCTCTGGCCATTTCTTTCTTATTGACCAAAAATACAAGCACATTGTGTTCCTCATTTATTCAGTCACTTGCTTCCCTGTGACTTTGTATGCAATAGCACAACTTCCACTTTACATTGATCTTCTTAGAAGCATTGTAACCAAAGTGCCAAAGACAAGTGATAAGGGGGAGGAAATATAA
Protein sequence

>Msa0461730

MTNTRDVEECINDSTHMTKEDKLRGYTLEGKWKEVKELYKSDLNNLSTIEINKSRGTALHVAVNDGNEEVVKSLVDSILTHKNVWALTCKNEKGDTPLHLAASRGFKNICECIIGKDGERKYLIDIDNENGETPLFLAALSWQKQTFVYLFELKCSYGGSYSKDLIRKNGDSILHCAIRREFFGIPAGTLNVDEAIEYCRLKHESKPQESCPKNCDTCYLFIDKCREYAYPLISFAKQKLQKKQTTSNAANGSKDMGEKDKGLPSECKLLPENYATYNNNEDPKTSAKLEREAILESETTILTAARLISEAISKSQTSILTENLDRKKAILESETPILTAARNGIVEIVEKLITKIPSSIYDLNLENKNVLLVAVENRRTNVVEALRKRFDKCNKMAIFDDLIQGVDKEENTVLHLAATKSDRDWNISGAALQMMWHIKWFQYTKGLVPEHFAVRTNKDDKTAGELFKKSHEELVTKGSEWLKDTSESCSVVAALLAGVSFATSSTVPGGNRSETGEPALEGRPAFDAFALSSVIGLCFSVTALVMFLSILTSRKEAKDFRIDMPRKLLLGLSSLFLSIIAMFVAFCSGHFFLIDQKYKHIVFLIYSVTCFPVTLYAIAQLPLYIDLLRSIVTKVPKTSDKGEEI*