Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375090 | KEH35377.1 | 70.588 | 153 | 29 | 4 | 1 | 150 | 1 | 140 | 9.40e-62 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375090 | A0A072V0S2 | 70.588 | 153 | 29 | 4 | 1 | 150 | 1 | 140 | 4.49e-62 | 196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa0375090 | 0.811215 | 7.827230e-51 | -8.615850e-47 |
| Msa0017510 | Msa0375090 | 0.812984 | 3.219439e-51 | -8.615850e-47 |
| Msa0036430 | Msa0375090 | 0.829707 | 4.428757e-55 | -8.615850e-47 |
| Msa0036960 | Msa0375090 | 0.824514 | 7.744077e-54 | -8.615850e-47 |
| Msa0044020 | Msa0375090 | 0.806287 | 8.851657e-50 | -8.615850e-47 |
| Msa0044100 | Msa0375090 | 0.838703 | 2.456686e-57 | -8.615850e-47 |
| Msa0046750 | Msa0375090 | 0.806955 | 6.396869e-50 | -8.615850e-47 |
| Msa0069310 | Msa0375090 | 0.809802 | 1.580729e-50 | -8.615850e-47 |
| Msa0072370 | Msa0375090 | 0.824220 | 9.082415e-54 | -8.615850e-47 |
| Msa0084500 | Msa0375090 | 0.804178 | 2.447014e-49 | -8.615850e-47 |
| Msa0095540 | Msa0375090 | 0.839106 | 1.931899e-57 | -8.615850e-47 |
| Msa0097990 | Msa0375090 | 0.802292 | 6.012517e-49 | -8.615850e-47 |
| Msa0105420 | Msa0375090 | 0.833500 | 5.146307e-56 | -8.615850e-47 |
| Msa0110970 | Msa0375090 | 0.810555 | 1.087269e-50 | -8.615850e-47 |
| Msa0124340 | Msa0375090 | 0.802373 | 5.786687e-49 | -8.615850e-47 |
| Msa0130570 | Msa0375090 | 0.823861 | 1.102543e-53 | -8.615850e-47 |
| Msa0141100 | Msa0375090 | 0.972029 | 4.188949e-134 | -8.615850e-47 |
| Msa0148340 | Msa0375090 | 0.812714 | 3.689946e-51 | -8.615850e-47 |
| Msa0156650 | Msa0375090 | -0.810044 | 1.401477e-50 | -8.615850e-47 |
| Msa0157290 | Msa0375090 | 0.812520 | 4.068427e-51 | -8.615850e-47 |
| Msa0172350 | Msa0375090 | 0.810576 | 1.076411e-50 | -8.615850e-47 |
| Msa0173990 | Msa0375090 | 0.809824 | 1.563505e-50 | -8.615850e-47 |
| Msa0183750 | Msa0375090 | 0.859389 | 4.279300e-63 | -8.615850e-47 |
| Msa0185380 | Msa0375090 | 0.814984 | 1.165999e-51 | -8.615850e-47 |
| Msa0185480 | Msa0375090 | 0.804838 | 1.782811e-49 | -8.615850e-47 |
| Msa0191040 | Msa0375090 | 0.849921 | 2.371074e-60 | -8.615850e-47 |
| Msa0220300 | Msa0375090 | 0.860588 | 1.859918e-63 | -8.615850e-47 |
| Msa0225600 | Msa0375090 | 0.847520 | 1.098210e-59 | -8.615850e-47 |
| Msa0233340 | Msa0375090 | 0.849912 | 2.384701e-60 | -8.615850e-47 |
| Msa0236440 | Msa0375090 | 0.832798 | 7.696921e-56 | -8.615850e-47 |
| Msa0374850 | Msa0375090 | 0.974995 | 3.788144e-139 | -8.615850e-47 |
| Msa0375090 | Msa0385670 | 0.816635 | 4.996614e-52 | -8.615850e-47 |
| Msa0375090 | Msa0414950 | -0.809360 | 1.966310e-50 | -8.615850e-47 |
| Msa0375090 | Msa0419820 | 0.829221 | 5.812502e-55 | -8.615850e-47 |
| Msa0375090 | Msa0423360 | -0.829011 | 6.534761e-55 | -8.615850e-47 |
| Msa0375090 | Msa0435670 | 0.800106 | 1.684080e-48 | -8.615850e-47 |
| Msa0375090 | Msa0436280 | -0.815313 | 9.854279e-52 | -8.615850e-47 |
| Msa0375090 | Msa0458010 | 0.806133 | 9.537416e-50 | -8.615850e-47 |
| Msa0375090 | Msa0470340 | 0.949400 | 1.374461e-107 | -8.615850e-47 |
| Msa0375090 | Msa0470860 | 0.862121 | 6.341055e-64 | -8.615850e-47 |
| Msa0375090 | Msa0480320 | 0.801360 | 9.339688e-49 | -8.615850e-47 |
| Msa0375090 | Msa0480950 | 0.878130 | 3.602216e-69 | -8.615850e-47 |
| Msa0375090 | Msa0481110 | 0.846079 | 2.720468e-59 | -8.615850e-47 |
| Msa0375090 | Msa0484780 | 0.804840 | 1.781037e-49 | -8.615850e-47 |
| Msa0375090 | Msa0503580 | 0.828620 | 8.124534e-55 | -8.615850e-47 |
| Msa0375090 | Msa0526710 | 0.800539 | 1.374273e-48 | -8.615850e-47 |
| Msa0375090 | Msa0531430 | 0.898833 | 3.600014e-77 | -8.615850e-47 |
| Msa0375090 | Msa0534570 | 0.850225 | 1.948161e-60 | -8.615850e-47 |
| Msa0375090 | Msa0534590 | 0.886482 | 3.292149e-72 | -8.615850e-47 |
| Msa0375090 | Msa0535030 | 0.802336 | 5.888306e-49 | -8.615850e-47 |
| Msa0375090 | Msa0535060 | 0.805593 | 1.238728e-49 | -8.615850e-47 |
| Msa0375090 | Msa0548620 | 0.835415 | 1.700342e-56 | -8.615850e-47 |
| Msa0375090 | Msa0558840 | 0.802944 | 4.411898e-49 | -8.615850e-47 |
| Msa0375090 | Msa0565600 | 0.851541 | 8.300057e-61 | -8.615850e-47 |
| Msa0375090 | Msa0568820 | 0.801248 | 9.849987e-49 | -8.615850e-47 |
| Msa0375090 | Msa0590800 | 0.883892 | 3.053386e-71 | -8.615850e-47 |
| Msa0375090 | Msa0609430 | 0.821951 | 3.072064e-53 | -8.615850e-47 |
| Msa0375090 | Msa0611380 | 0.865619 | 5.179568e-65 | -8.615850e-47 |
| Msa0375090 | Msa0618180 | 0.842551 | 2.413459e-58 | -8.615850e-47 |
| Msa0375090 | Msa0618220 | 0.833101 | 6.469485e-56 | -8.615850e-47 |
| Msa0375090 | Msa0618290 | 0.805850 | 1.093863e-49 | -8.615850e-47 |
| Msa0375090 | Msa0619070 | 0.802625 | 5.133336e-49 | -8.615850e-47 |
| Msa0375090 | Msa0619990 | 0.848516 | 5.830365e-60 | -8.615850e-47 |
| Msa0375090 | Msa0621890 | 0.810738 | 9.928261e-51 | -8.615850e-47 |
| Msa0375090 | Msa0628640 | 0.887945 | 9.129853e-73 | -8.615850e-47 |
| Msa0375090 | Msa0631120 | 0.904779 | 8.587124e-80 | -8.615850e-47 |
| Msa0375090 | Msa0633840 | 0.801861 | 7.374774e-49 | -8.615850e-47 |
| Msa0375090 | Msa0638070 | 0.800604 | 1.333029e-48 | -8.615850e-47 |
| Msa0375090 | Msa0650070 | 0.834262 | 3.318483e-56 | -8.615850e-47 |
| Msa0375090 | Msa0666030 | 0.865005 | 8.080201e-65 | -8.615850e-47 |
| Msa0375090 | Msa0669340 | 0.894950 | 1.521607e-75 | -8.615850e-47 |
| Msa0375090 | Msa0684500 | 0.869264 | 3.528132e-66 | -8.615850e-47 |
| Msa0375090 | Msa0692060 | 0.835945 | 1.248257e-56 | -8.615850e-47 |
| Msa0375090 | Msa0701970 | 0.872241 | 3.698002e-67 | -8.615850e-47 |
| Msa0375090 | Msa0706420 | 0.828294 | 9.737749e-55 | -8.615850e-47 |
| Msa0375090 | Msa0709500 | 0.814899 | 1.218125e-51 | -8.615850e-47 |
| Msa0375090 | Msa0716450 | 0.899317 | 2.234677e-77 | -8.615850e-47 |
| Msa0375090 | Msa0717260 | 0.886288 | 3.896570e-72 | -8.615850e-47 |
| Msa0375090 | Msa0734230 | 0.827344 | 1.647433e-54 | -8.615850e-47 |
| Msa0375090 | Msa0741900 | 0.819875 | 9.228453e-53 | -8.615850e-47 |
| Msa0375090 | Msa0750880 | 0.806317 | 8.722991e-50 | -8.615850e-47 |
| Msa0375090 | Msa0754720 | -0.812414 | 4.291322e-51 | -8.615850e-47 |
| Msa0375090 | Msa0756630 | -0.821272 | 4.409181e-53 | -8.615850e-47 |
| Msa0375090 | Msa0758320 | 0.894824 | 1.713794e-75 | -8.615850e-47 |
| Msa0375090 | Msa0775440 | 0.879813 | 9.172793e-70 | -8.615850e-47 |
| Msa0375090 | Msa0780740 | 0.827326 | 1.663883e-54 | -8.615850e-47 |
| Msa0375090 | Msa0787260 | 0.823043 | 1.713145e-53 | -8.615850e-47 |
| Msa0375090 | Msa0790850 | 0.814462 | 1.522190e-51 | -8.615850e-47 |
| Msa0375090 | Msa0799030 | 0.892275 | 1.844771e-74 | -8.615850e-47 |
| Msa0375090 | Msa0799700 | 0.850019 | 2.224830e-60 | -8.615850e-47 |
| Msa0375090 | Msa0810020 | 0.830786 | 2.413637e-55 | -8.615850e-47 |
| Msa0375090 | Msa0812820 | 0.852812 | 3.610030e-61 | -8.615850e-47 |
| Msa0375090 | Msa0822990 | 0.823879 | 1.091916e-53 | -8.615850e-47 |
| Msa0375090 | Msa0837440 | 0.890377 | 1.041090e-73 | -8.615850e-47 |
| Msa0375090 | Msa0837980 | 0.897710 | 1.080207e-76 | -8.615850e-47 |
| Msa0375090 | Msa0853320 | 0.882220 | 1.250011e-70 | -8.615850e-47 |
| Msa0375090 | Msa0862100 | 0.805545 | 1.267619e-49 | -8.615850e-47 |
| Msa0375090 | Msa0867890 | 0.800172 | 1.632203e-48 | -8.615850e-47 |
| Msa0375090 | Msa0870620 | 0.812746 | 3.629730e-51 | -8.615850e-47 |
| Msa0375090 | Msa0872310 | 0.801292 | 9.644437e-49 | -8.615850e-47 |
| Msa0375090 | Msa0880140 | 0.814734 | 1.325115e-51 | -8.615850e-47 |
| Msa0375090 | Msa0880710 | 0.837179 | 6.053947e-57 | -8.615850e-47 |
| Msa0375090 | Msa0885060 | 0.800650 | 1.304504e-48 | -8.615850e-47 |
| Msa0375090 | Msa0886980 | 0.800323 | 1.521340e-48 | -8.615850e-47 |
| Msa0375090 | Msa0896210 | 0.801869 | 7.346293e-49 | -8.615850e-47 |
| Msa0375090 | Msa0936270 | 0.804556 | 2.040815e-49 | -8.615850e-47 |
| Msa0375090 | Msa0944770 | 0.817296 | 3.549414e-52 | -8.615850e-47 |
| Msa0375090 | Msa0951710 | 0.812568 | 3.970668e-51 | -8.615850e-47 |
| Msa0375090 | Msa0966340 | 0.812322 | 4.494655e-51 | -8.615850e-47 |
| Msa0375090 | Msa0966420 | 0.822109 | 2.823912e-53 | -8.615850e-47 |
| Msa0375090 | Msa0966440 | 0.818370 | 2.031126e-52 | -8.615850e-47 |
| Msa0375090 | Msa0968590 | 0.804172 | 2.453654e-49 | -8.615850e-47 |
| Msa0375090 | Msa0970030 | 0.802281 | 6.043141e-49 | -8.615850e-47 |
| Msa0375090 | Msa0981010 | 0.845225 | 4.636993e-59 | -8.615850e-47 |
| Msa0375090 | Msa1001770 | 0.818458 | 1.940039e-52 | -8.615850e-47 |
| Msa0375090 | Msa1002620 | 0.891786 | 2.889830e-74 | -8.615850e-47 |
| Msa0375090 | Msa1007610 | -0.819452 | 1.153003e-52 | -8.615850e-47 |
| Msa0375090 | Msa1010110 | 0.817522 | 3.157417e-52 | -8.615850e-47 |
| Msa0375090 | Msa1013400 | 0.806290 | 8.839945e-50 | -8.615850e-47 |
| Msa0375090 | Msa1033560 | 0.847425 | 1.166168e-59 | -8.615850e-47 |
| Msa0375090 | Msa1040400 | 0.825109 | 5.606892e-54 | -8.615850e-47 |
| Msa0375090 | Msa1040830 | 0.800237 | 1.583743e-48 | -8.615850e-47 |
| Msa0375090 | Msa1073340 | 0.810981 | 8.797260e-51 | -8.615850e-47 |
| Msa0375090 | Msa1073350 | 0.802934 | 4.432389e-49 | -8.615850e-47 |
| Msa0375090 | Msa1083150 | 0.820366 | 7.125022e-53 | -8.615850e-47 |
| Msa0375090 | Msa1098560 | 0.812278 | 4.593868e-51 | -8.615850e-47 |
| Msa0375090 | Msa1113850 | 0.846080 | 2.719650e-59 | -8.615850e-47 |
| Msa0375090 | Msa1125760 | 0.816853 | 4.463134e-52 | -8.615850e-47 |
| Msa0375090 | Msa1127890 | 0.808666 | 2.769033e-50 | -8.615850e-47 |
| Msa0375090 | Msa1140690 | 0.811010 | 8.669996e-51 | -8.615850e-47 |
| Msa0375090 | Msa1160400 | 0.842084 | 3.208524e-58 | -8.615850e-47 |
| Msa0375090 | Msa1165870 | 0.807872 | 4.087197e-50 | -8.615850e-47 |
| Msa0375090 | Msa1171360 | 0.813647 | 2.302527e-51 | -8.615850e-47 |
| Msa0375090 | Msa1172670 | 0.808908 | 2.458190e-50 | -8.615850e-47 |
| Msa0375090 | Msa1179460 | 0.826740 | 2.297570e-54 | -8.615850e-47 |
| Msa0375090 | Msa1187840 | 0.802057 | 6.721841e-49 | -8.615850e-47 |
| Msa0375090 | Msa1190120 | 0.847975 | 8.228345e-60 | -8.615850e-47 |
| Msa0375090 | Msa1197590 | 0.856929 | 2.307340e-62 | -8.615850e-47 |
| Msa0375090 | Msa1201890 | 0.829449 | 5.115875e-55 | -8.615850e-47 |
| Msa0375090 | Msa1203000 | 0.888889 | 3.952830e-73 | -8.615850e-47 |
| Msa0375090 | Msa1204120 | 0.803798 | 2.935553e-49 | -8.615850e-47 |
| Msa0375090 | Msa1205960 | 0.816806 | 4.573594e-52 | -8.615850e-47 |
| Msa0375090 | Msa1207270 | 0.804045 | 2.607954e-49 | -8.615850e-47 |
| Msa0375090 | Msa1211550 | 0.848789 | 4.899916e-60 | -8.615850e-47 |
| Msa0375090 | Msa1214890 | 0.802627 | 5.127670e-49 | -8.615850e-47 |
| Msa0375090 | Msa1217860 | 0.822544 | 2.237757e-53 | -8.615850e-47 |
| Msa0375090 | Msa1217940 | 0.880950 | 3.595773e-70 | -8.615850e-47 |
| Msa0375090 | Msa1218480 | 0.844518 | 7.194175e-59 | -8.615850e-47 |
| Msa0375090 | Msa1218600 | 0.806548 | 7.796174e-50 | -8.615850e-47 |
| Msa0375090 | Msa1219260 | 0.901610 | 2.251194e-78 | -8.615850e-47 |
| Msa0375090 | Msa1227950 | 0.850779 | 1.361682e-60 | -8.615850e-47 |
| Msa0375090 | Msa1227970 | 0.844970 | 5.434039e-59 | -8.615850e-47 |
| Msa0375090 | Msa1254700 | 0.859459 | 4.075784e-63 | -8.615850e-47 |
| Msa0375090 | Msa1255040 | -0.813014 | 3.170887e-51 | -8.615850e-47 |
| Msa0375090 | Msa1255280 | 0.897001 | 2.145050e-76 | -8.615850e-47 |
| Msa0375090 | Msa1258050 | 0.848691 | 5.217323e-60 | -8.615850e-47 |
| Msa0375090 | Msa1260040 | 0.807859 | 4.114785e-50 | -8.615850e-47 |
| Msa0375090 | Msa1264020 | 0.802569 | 5.272263e-49 | -8.615850e-47 |
| Msa0375090 | Msa1265960 | 0.807735 | 4.371112e-50 | -8.615850e-47 |
| Msa0375090 | Msa1266960 | 0.895066 | 1.364222e-75 | -8.615850e-47 |
| Msa0375090 | Msa1269580 | -0.816642 | 4.977644e-52 | -8.615850e-47 |
| Msa0375090 | Msa1291870 | 0.859826 | 3.160947e-63 | -8.615850e-47 |
| Msa0375090 | Msa1294900 | 0.804650 | 1.951310e-49 | -8.615850e-47 |
| Msa0375090 | Msa1300860 | 0.800661 | 1.298209e-48 | -8.615850e-47 |
| Msa0375090 | Msa1300870 | 0.807445 | 5.036134e-50 | -8.615850e-47 |
| Msa0375090 | Msa1322190 | 0.800332 | 1.514786e-48 | -8.615850e-47 |
| Msa0375090 | Msa1329920 | 0.846738 | 1.798070e-59 | -8.615850e-47 |
| Msa0375090 | Msa1331910 | 0.814959 | 1.180937e-51 | -8.615850e-47 |
| Msa0375090 | Msa1331920 | 0.809897 | 1.507902e-50 | -8.615850e-47 |
| Msa0375090 | Msa1339940 | 0.854044 | 1.599189e-61 | -8.615850e-47 |
| Msa0375090 | Msa1340650 | 0.800039 | 1.737387e-48 | -8.615850e-47 |
| Msa0375090 | Msa1342430 | 0.826399 | 2.771485e-54 | -8.615850e-47 |
| Msa0375090 | Msa1343820 | 0.817333 | 3.481757e-52 | -8.615850e-47 |
| Msa0375090 | Msa1353060 | 0.813543 | 2.427172e-51 | -8.615850e-47 |
| Msa0375090 | Msa1363890 | 0.804906 | 1.725262e-49 | -8.615850e-47 |
| Msa0375090 | Msa1369700 | 0.844358 | 7.944574e-59 | -8.615850e-47 |
| Msa0375090 | Msa1370090 | 0.808055 | 3.736782e-50 | -8.615850e-47 |
| Msa0375090 | Msa1381140 | 0.824979 | 6.019137e-54 | -8.615850e-47 |
| Msa0375090 | Msa1385670 | 0.809225 | 2.101720e-50 | -8.615850e-47 |
| Msa0375090 | Msa1390310 | 0.800036 | 1.739532e-48 | -8.615850e-47 |
| Msa0375090 | Msa1395870 | 0.887605 | 1.232563e-72 | -8.615850e-47 |
| Msa0375090 | Msa1397250 | 0.854323 | 1.329210e-61 | -8.615850e-47 |
| Msa0375090 | Msa1399560 | 0.895624 | 8.030626e-76 | -8.615850e-47 |
| Msa0375090 | Msa1401150 | 0.852702 | 3.880893e-61 | -8.615850e-47 |
| Msa0375090 | Msa1405180 | 0.820418 | 6.931002e-53 | -8.615850e-47 |
| Msa0375090 | Msa1423450 | 0.810574 | 1.077075e-50 | -8.615850e-47 |
| Msa0375090 | Msa1429360 | -0.815421 | 9.323653e-52 | -8.615850e-47 |
| Msa0375090 | Msa1431000 | 0.810292 | 1.239526e-50 | -8.615850e-47 |
| Msa0375090 | Msa1437190 | 0.851205 | 1.032808e-60 | -8.615850e-47 |
| Msa0375090 | Msa1438740 | 0.801574 | 8.442385e-49 | -8.615850e-47 |
| Msa0375090 | Msa1439960 | 0.820394 | 7.019046e-53 | -8.615850e-47 |
| Msa0375090 | Msa1440340 | 0.841646 | 4.187754e-58 | -8.615850e-47 |
| Msa0375090 | Msa1443840 | 0.866604 | 2.524448e-65 | -8.615850e-47 |
| Msa0375090 | Msa1449730 | 0.849446 | 3.218001e-60 | -8.615850e-47 |
| Msa0375090 | Msa1452060 | 0.849723 | 2.692973e-60 | -8.615850e-47 |
| Msa0375090 | Msa1460380 | 0.857021 | 2.167890e-62 | -8.615850e-47 |
| Msa0375090 | Msa1460890 | 0.814000 | 1.925301e-51 | -8.615850e-47 |
| Msa0375090 | Msa1461280 | 0.800501 | 1.398920e-48 | -8.615850e-47 |
| Msa0246430 | Msa0375090 | 0.800928 | 1.145003e-48 | -8.615850e-47 |
| Msa0251240 | Msa0375090 | 0.836537 | 8.832520e-57 | -8.615850e-47 |
| Msa0259370 | Msa0375090 | 0.802017 | 6.848670e-49 | -8.615850e-47 |
| Msa0266450 | Msa0375090 | 0.858507 | 7.854794e-63 | -8.615850e-47 |
| Msa0267760 | Msa0375090 | 0.804347 | 2.256545e-49 | -8.615850e-47 |
| Msa0282250 | Msa0375090 | 0.805924 | 1.055574e-49 | -8.615850e-47 |
| Msa0287650 | Msa0375090 | 0.801095 | 1.058216e-48 | -8.615850e-47 |
| Msa0288190 | Msa0375090 | 0.803522 | 3.348819e-49 | -8.615850e-47 |
| Msa0296760 | Msa0375090 | 0.805796 | 1.122901e-49 | -8.615850e-47 |
| Msa0309350 | Msa0375090 | 0.806554 | 7.775265e-50 | -8.615850e-47 |
| Msa0311690 | Msa0375090 | 0.842016 | 3.345021e-58 | -8.615850e-47 |
| Msa0315250 | Msa0375090 | 0.837395 | 5.331861e-57 | -8.615850e-47 |
| Msa0316850 | Msa0375090 | 0.817547 | 3.115972e-52 | -8.615850e-47 |
| Msa0326540 | Msa0375090 | 0.813084 | 3.060712e-51 | -8.615850e-47 |
| Msa0334500 | Msa0375090 | 0.812441 | 4.232357e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 36 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAGTGAATACAGCATTC+TGG | 0.307625 | 3_1:-74694444 | None:intergenic |
| AGCTCATTCCCTCCGGTTAG+AGG | 0.341992 | 3_1:-74696127 | None:intergenic |
| TTGGTGCGCCATTTCCATTC+CGG | 0.361769 | 3_1:+74696186 | Msa0375090:CDS |
| TGCTGTACTGTCGAAGTTCA+TGG | 0.381882 | 3_1:+74695604 | Msa0375090:CDS |
| AGAATGTTCATGTCCATGTT+TGG | 0.385757 | 3_1:-74696091 | None:intergenic |
| CTCTTGATGCTTCCTCTAAC+CGG | 0.394494 | 3_1:+74696115 | Msa0375090:CDS |
| TGTCTGCTGCAGACTTAGAT+TGG | 0.399453 | 3_1:+74696167 | Msa0375090:CDS |
| TGAACAGGATGGGGTGGCCG+AGG | 0.409297 | 3_1:+74696053 | Msa0375090:intron |
| TTCAGTGAATACAGCATTCT+GGG | 0.409303 | 3_1:-74694443 | None:intergenic |
| CGTTTGATCTCGATTGATCA+TGG | 0.411796 | 3_1:-74696218 | None:intergenic |
| CCAGTTGCAACCACGATTGT+TGG | 0.419959 | 3_1:+74694384 | Msa0375090:CDS |
| ATTATAGGTGGCTCCGTCCC+TGG | 0.426772 | 3_1:+74695537 | Msa0375090:intron |
| AAAGAAAACCGGAATGGAAA+TGG | 0.435071 | 3_1:-74696194 | None:intergenic |
| CCAACAATCGTGGTTGCAAC+TGG | 0.460178 | 3_1:-74694384 | None:intergenic |
| TTGATCATGGAAAAGAAAAC+CGG | 0.489124 | 3_1:-74696205 | None:intergenic |
| CTTCGTTGTGCAAGTGATTG+TGG | 0.509528 | 3_1:-74695565 | None:intergenic |
| GAACAGGATGGGGTGGCCGA+GGG | 0.510010 | 3_1:+74696054 | Msa0375090:intron |
| AATCACTTGCACAACGAAGC+AGG | 0.517094 | 3_1:+74695569 | Msa0375090:CDS |
| TACTGATAAAAGCATAATCC+TGG | 0.519988 | 3_1:-74694408 | None:intergenic |
| AAAATTTAGCTCATTCCCTC+CGG | 0.520005 | 3_1:-74696134 | None:intergenic |
| TGAATACAGCATTCTGGGCG+AGG | 0.532999 | 3_1:-74694438 | None:intergenic |
| AGTTCATGGTTCCACATAAG+TGG | 0.551033 | 3_1:+74695618 | Msa0375090:CDS |
| CAAGTGATTGTGGTGCAACC+AGG | 0.558677 | 3_1:-74695555 | None:intergenic |
| ATCACTTGCACAACGAAGCA+GGG | 0.575010 | 3_1:+74695570 | Msa0375090:CDS |
| CATGGAAAAGAAAACCGGAA+TGG | 0.575984 | 3_1:-74696200 | None:intergenic |
| GCAACCACGATTGTTGGACC+AGG | 0.579692 | 3_1:+74694390 | Msa0375090:CDS |
| TTCAACTTCGTGTTGTCTAG+AGG | 0.579794 | 3_1:-74694485 | None:intergenic |
| AACTTCTGAACAGGATGGGG+TGG | 0.581840 | 3_1:+74696047 | Msa0375090:intron |
| GATTGTGGTGCAACCAGGGA+CGG | 0.591641 | 3_1:-74695550 | None:intergenic |
| CGGTTAGAGGAAGCATCAAG+AGG | 0.632608 | 3_1:-74696114 | None:intergenic |
| TTGATGCTTCCTCTAACCGG+AGG | 0.635948 | 3_1:+74696118 | Msa0375090:CDS |
| TGATGCTTCCTCTAACCGGA+GGG | 0.648380 | 3_1:+74696119 | Msa0375090:CDS |
| TGATCAATCGAGATCAAACG+AGG | 0.656317 | 3_1:+74696221 | Msa0375090:CDS |
| TAATCCTGGTCCAACAATCG+TGG | 0.660315 | 3_1:-74694394 | None:intergenic |
| AAGTGATTGTGGTGCAACCA+GGG | 0.678211 | 3_1:-74695554 | None:intergenic |
| GATCAATCGAGATCAAACGA+GGG | 0.743681 | 3_1:+74696222 | Msa0375090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAGTAAATTTTAATTTAATT+TGG | - | chr3_1:74695656-74695675 | None:intergenic | 10.0% |
| !!! | CAGTAAATTTTAATTTAATT+TGG | - | chr3_1:74695656-74695675 | None:intergenic | 10.0% |
| !! | AATTTAACATTTGATTGATA+TGG | - | chr3_1:74695007-74695026 | None:intergenic | 15.0% |
| !!! | TAATTTGTTTTATCCATAAA+AGG | + | chr3_1:74695284-74695303 | Msa0375090:intron | 15.0% |
| !! | AACATCATTATATTATCTAT+TGG | + | chr3_1:74695401-74695420 | Msa0375090:intron | 15.0% |
| !! | TCATTATTAATTCATAAATC+AGG | + | chr3_1:74696015-74696034 | Msa0375090:intron | 15.0% |
| !! | AATTTAACATTTGATTGATA+TGG | - | chr3_1:74695007-74695026 | None:intergenic | 15.0% |
| !!! | TAATTTGTTTTATCCATAAA+AGG | + | chr3_1:74695284-74695303 | Msa0375090:intron | 15.0% |
| !! | AACATCATTATATTATCTAT+TGG | + | chr3_1:74695401-74695420 | Msa0375090:intron | 15.0% |
| !! | TCATTATTAATTCATAAATC+AGG | + | chr3_1:74696015-74696034 | Msa0375090:intron | 15.0% |
| !!! | ACATTTTACTTATGAAATCA+TGG | - | chr3_1:74694834-74694853 | None:intergenic | 20.0% |
| !! | TTTCATAAGTAAAATGTCTT+TGG | + | chr3_1:74694837-74694856 | Msa0375090:intron | 20.0% |
| !!! | TTTTTTTTGCTTGTATTTGA+CGG | - | chr3_1:74694883-74694902 | None:intergenic | 20.0% |
| !! | TTAGCTTAACGTTAAATTAT+AGG | - | chr3_1:74695154-74695173 | None:intergenic | 20.0% |
| !! | AAGAACTAATAACTATAGTT+TGG | + | chr3_1:74695172-74695191 | Msa0375090:intron | 20.0% |
| !!! | GGAGAATTTTATTGTTTAAT+TGG | + | chr3_1:74695351-74695370 | Msa0375090:intron | 20.0% |
| !! | TTTATTGTTTAATTGGAATG+TGG | + | chr3_1:74695358-74695377 | Msa0375090:intron | 20.0% |
| !!! | TAGAAGTACATTTTGATTAT+AGG | + | chr3_1:74695522-74695541 | Msa0375090:intron | 20.0% |
| !! | AATATAAGATACAATATGAG+TGG | + | chr3_1:74695701-74695720 | Msa0375090:intron | 20.0% |
| !! | TTATTAATTCATAAATCAGG+AGG | + | chr3_1:74696018-74696037 | Msa0375090:intron | 20.0% |
| !!! | ACATTTTACTTATGAAATCA+TGG | - | chr3_1:74694834-74694853 | None:intergenic | 20.0% |
| !! | TTTCATAAGTAAAATGTCTT+TGG | + | chr3_1:74694837-74694856 | Msa0375090:intron | 20.0% |
| !!! | TTTTTTTTGCTTGTATTTGA+CGG | - | chr3_1:74694883-74694902 | None:intergenic | 20.0% |
| !! | TTAGCTTAACGTTAAATTAT+AGG | - | chr3_1:74695154-74695173 | None:intergenic | 20.0% |
| !! | AAGAACTAATAACTATAGTT+TGG | + | chr3_1:74695172-74695191 | Msa0375090:intron | 20.0% |
| !!! | GGAGAATTTTATTGTTTAAT+TGG | + | chr3_1:74695351-74695370 | Msa0375090:intron | 20.0% |
| !! | TTTATTGTTTAATTGGAATG+TGG | + | chr3_1:74695358-74695377 | Msa0375090:intron | 20.0% |
| !!! | TAGAAGTACATTTTGATTAT+AGG | + | chr3_1:74695522-74695541 | Msa0375090:intron | 20.0% |
| !! | AATATAAGATACAATATGAG+TGG | + | chr3_1:74695701-74695720 | Msa0375090:intron | 20.0% |
| !! | TTATTAATTCATAAATCAGG+AGG | + | chr3_1:74696018-74696037 | Msa0375090:intron | 20.0% |
| ! | TGTTACAGAAATTAGAATTG+AGG | - | chr3_1:74694547-74694566 | None:intergenic | 25.0% |
| !!! | TTGTATGCATTTACTTTTGT+AGG | - | chr3_1:74694753-74694772 | None:intergenic | 25.0% |
| !!! | ATACAAAAAAGTATCCATCA+AGG | + | chr3_1:74694767-74694786 | Msa0375090:intron | 25.0% |
| ! | AAATATCATGATTTCCTTGA+TGG | - | chr3_1:74694784-74694803 | None:intergenic | 25.0% |
| ! | TGTTAATGTTGTGTATAACT+CGG | + | chr3_1:74695046-74695065 | Msa0375090:intron | 25.0% |
| ! | CAATTACATCATTATGAGTT+TGG | - | chr3_1:74695111-74695130 | None:intergenic | 25.0% |
| ! | TAACGTTAAATTATAGGACA+AGG | - | chr3_1:74695148-74695167 | None:intergenic | 25.0% |
| !! | AAATTTAAAATGACAAAGCG+TGG | - | chr3_1:74695218-74695237 | None:intergenic | 25.0% |
| !! | GTTTTATCCATAAAAGGAAT+TGG | + | chr3_1:74695290-74695309 | Msa0375090:intron | 25.0% |
| !!! | AAGTACATTTTGATTATAGG+TGG | + | chr3_1:74695525-74695544 | Msa0375090:intron | 25.0% |
| ! | CTTACATAAACTAAAACAGA+AGG | + | chr3_1:74695910-74695929 | Msa0375090:intron | 25.0% |
| ! | ACACCATAATTTAATGTATG+TGG | + | chr3_1:74695988-74696007 | Msa0375090:intron | 25.0% |
| ! | ATGCCACATACATTAAATTA+TGG | - | chr3_1:74695994-74696013 | None:intergenic | 25.0% |
| !!! | GTACTTTATTTTTCCAAACA+TGG | + | chr3_1:74696078-74696097 | Msa0375090:CDS | 25.0% |
| ! | TGTTACAGAAATTAGAATTG+AGG | - | chr3_1:74694547-74694566 | None:intergenic | 25.0% |
| !!! | TTGTATGCATTTACTTTTGT+AGG | - | chr3_1:74694753-74694772 | None:intergenic | 25.0% |
| !!! | ATACAAAAAAGTATCCATCA+AGG | + | chr3_1:74694767-74694786 | Msa0375090:intron | 25.0% |
| ! | AAATATCATGATTTCCTTGA+TGG | - | chr3_1:74694784-74694803 | None:intergenic | 25.0% |
| ! | TGTTAATGTTGTGTATAACT+CGG | + | chr3_1:74695046-74695065 | Msa0375090:intron | 25.0% |
| ! | CAATTACATCATTATGAGTT+TGG | - | chr3_1:74695111-74695130 | None:intergenic | 25.0% |
| ! | TAACGTTAAATTATAGGACA+AGG | - | chr3_1:74695148-74695167 | None:intergenic | 25.0% |
| !! | AAATTTAAAATGACAAAGCG+TGG | - | chr3_1:74695218-74695237 | None:intergenic | 25.0% |
| !! | GTTTTATCCATAAAAGGAAT+TGG | + | chr3_1:74695290-74695309 | Msa0375090:intron | 25.0% |
| !!! | AAGTACATTTTGATTATAGG+TGG | + | chr3_1:74695525-74695544 | Msa0375090:intron | 25.0% |
| ! | CTTACATAAACTAAAACAGA+AGG | + | chr3_1:74695910-74695929 | Msa0375090:intron | 25.0% |
| ! | ACACCATAATTTAATGTATG+TGG | + | chr3_1:74695988-74696007 | Msa0375090:intron | 25.0% |
| ! | ATGCCACATACATTAAATTA+TGG | - | chr3_1:74695994-74696013 | None:intergenic | 25.0% |
| !!! | GTACTTTATTTTTCCAAACA+TGG | + | chr3_1:74696078-74696097 | Msa0375090:CDS | 25.0% |
| ! | TACTGATAAAAGCATAATCC+TGG | - | chr3_1:74694411-74694430 | None:intergenic | 30.0% |
| ! | AGAAAAACATGCTTTTAGAC+TGG | + | chr3_1:74694952-74694971 | Msa0375090:intron | 30.0% |
| TTGATATGGTAATTCGTCTT+GGG | - | chr3_1:74694993-74695012 | None:intergenic | 30.0% | |
| ATTGATATGGTAATTCGTCT+TGG | - | chr3_1:74694994-74695013 | None:intergenic | 30.0% | |
| ! | ATCAAGTCCAATTCCTTTTA+TGG | - | chr3_1:74695300-74695319 | None:intergenic | 30.0% |
| TTGCAATTACAGATAGTGTT+TGG | + | chr3_1:74695324-74695343 | Msa0375090:intron | 30.0% | |
| AATGCATTCATTTATTGCCA+AGG | + | chr3_1:74695471-74695490 | Msa0375090:intron | 30.0% | |
| ATGCATTCATTTATTGCCAA+GGG | + | chr3_1:74695472-74695491 | Msa0375090:intron | 30.0% | |
| ! | TTTATGTTCGTTGCAGTTTT+CGG | - | chr3_1:74695746-74695765 | None:intergenic | 30.0% |
| AAAACTGCAACGAACATAAA+AGG | + | chr3_1:74695746-74695765 | Msa0375090:intron | 30.0% | |
| ! | CGAACATAAAAGGTATGTAT+AGG | + | chr3_1:74695756-74695775 | Msa0375090:intron | 30.0% |
| ! | CATAAAAGGTATGTATAGGA+AGG | + | chr3_1:74695760-74695779 | Msa0375090:intron | 30.0% |
| TAGTTTATGTAAGAGTCTCA+CGG | - | chr3_1:74695903-74695922 | None:intergenic | 30.0% | |
| TTGATCATGGAAAAGAAAAC+CGG | - | chr3_1:74696208-74696227 | None:intergenic | 30.0% | |
| ! | TACTGATAAAAGCATAATCC+TGG | - | chr3_1:74694411-74694430 | None:intergenic | 30.0% |
| ! | AGAAAAACATGCTTTTAGAC+TGG | + | chr3_1:74694952-74694971 | Msa0375090:intron | 30.0% |
| TTGATATGGTAATTCGTCTT+GGG | - | chr3_1:74694993-74695012 | None:intergenic | 30.0% | |
| ATTGATATGGTAATTCGTCT+TGG | - | chr3_1:74694994-74695013 | None:intergenic | 30.0% | |
| ! | ATCAAGTCCAATTCCTTTTA+TGG | - | chr3_1:74695300-74695319 | None:intergenic | 30.0% |
| TTGCAATTACAGATAGTGTT+TGG | + | chr3_1:74695324-74695343 | Msa0375090:intron | 30.0% | |
| AATGCATTCATTTATTGCCA+AGG | + | chr3_1:74695471-74695490 | Msa0375090:intron | 30.0% | |
| ATGCATTCATTTATTGCCAA+GGG | + | chr3_1:74695472-74695491 | Msa0375090:intron | 30.0% | |
| ! | TTTATGTTCGTTGCAGTTTT+CGG | - | chr3_1:74695746-74695765 | None:intergenic | 30.0% |
| AAAACTGCAACGAACATAAA+AGG | + | chr3_1:74695746-74695765 | Msa0375090:intron | 30.0% | |
| ! | CGAACATAAAAGGTATGTAT+AGG | + | chr3_1:74695756-74695775 | Msa0375090:intron | 30.0% |
| ! | CATAAAAGGTATGTATAGGA+AGG | + | chr3_1:74695760-74695779 | Msa0375090:intron | 30.0% |
| TAGTTTATGTAAGAGTCTCA+CGG | - | chr3_1:74695903-74695922 | None:intergenic | 30.0% | |
| TTGATCATGGAAAAGAAAAC+CGG | - | chr3_1:74696208-74696227 | None:intergenic | 30.0% | |
| TTCAGTGAATACAGCATTCT+GGG | - | chr3_1:74694446-74694465 | None:intergenic | 35.0% | |
| ! | ACATGCTTTTAGACTGGAAT+CGG | + | chr3_1:74694958-74694977 | Msa0375090:intron | 35.0% |
| ATTCATTTATTGCCAAGGGA+GGG | + | chr3_1:74695476-74695495 | Msa0375090:intron | 35.0% | |
| !! | TGTTTTTGTCACCACTTATG+TGG | - | chr3_1:74695632-74695651 | None:intergenic | 35.0% |
| GGAAAAATAAAGTACACCCT+CGG | - | chr3_1:74696073-74696092 | None:intergenic | 35.0% | |
| AGAATGTTCATGTCCATGTT+TGG | - | chr3_1:74696094-74696113 | None:intergenic | 35.0% | |
| ! | AAAATTTAGCTCATTCCCTC+CGG | - | chr3_1:74696137-74696156 | None:intergenic | 35.0% |
| AAAGAAAACCGGAATGGAAA+TGG | - | chr3_1:74696197-74696216 | None:intergenic | 35.0% | |
| TTCAGTGAATACAGCATTCT+GGG | - | chr3_1:74694446-74694465 | None:intergenic | 35.0% | |
| ! | ACATGCTTTTAGACTGGAAT+CGG | + | chr3_1:74694958-74694977 | Msa0375090:intron | 35.0% |
| ATTCATTTATTGCCAAGGGA+GGG | + | chr3_1:74695476-74695495 | Msa0375090:intron | 35.0% | |
| !! | TGTTTTTGTCACCACTTATG+TGG | - | chr3_1:74695632-74695651 | None:intergenic | 35.0% |
| GGAAAAATAAAGTACACCCT+CGG | - | chr3_1:74696073-74696092 | None:intergenic | 35.0% | |
| AGAATGTTCATGTCCATGTT+TGG | - | chr3_1:74696094-74696113 | None:intergenic | 35.0% | |
| ! | AAAATTTAGCTCATTCCCTC+CGG | - | chr3_1:74696137-74696156 | None:intergenic | 35.0% |
| AAAGAAAACCGGAATGGAAA+TGG | - | chr3_1:74696197-74696216 | None:intergenic | 35.0% | |
| CTTCAGTGAATACAGCATTC+TGG | - | chr3_1:74694447-74694466 | None:intergenic | 40.0% | |
| TTCAACTTCGTGTTGTCTAG+AGG | - | chr3_1:74694488-74694507 | None:intergenic | 40.0% | |
| GGAGCCAGGATAAATATCAA+GGG | + | chr3_1:74694631-74694650 | Msa0375090:intron | 40.0% | |
| TTACAGATAGTGTTTGGCAG+TGG | + | chr3_1:74695330-74695349 | Msa0375090:intron | 40.0% | |
| CATTCATTTATTGCCAAGGG+AGG | + | chr3_1:74695475-74695494 | Msa0375090:intron | 40.0% | |
| TTCATTTATTGCCAAGGGAG+GGG | + | chr3_1:74695477-74695496 | Msa0375090:intron | 40.0% | |
| AGTTCATGGTTCCACATAAG+TGG | + | chr3_1:74695618-74695637 | Msa0375090:CDS | 40.0% | |
| CATGGAAAAGAAAACCGGAA+TGG | - | chr3_1:74696203-74696222 | None:intergenic | 40.0% | |
| CGTTTGATCTCGATTGATCA+TGG | - | chr3_1:74696221-74696240 | None:intergenic | 40.0% | |
| TGATCAATCGAGATCAAACG+AGG | + | chr3_1:74696221-74696240 | Msa0375090:CDS | 40.0% | |
| GATCAATCGAGATCAAACGA+GGG | + | chr3_1:74696222-74696241 | Msa0375090:CDS | 40.0% | |
| CTTCAGTGAATACAGCATTC+TGG | - | chr3_1:74694447-74694466 | None:intergenic | 40.0% | |
| TTCAACTTCGTGTTGTCTAG+AGG | - | chr3_1:74694488-74694507 | None:intergenic | 40.0% | |
| GGAGCCAGGATAAATATCAA+GGG | + | chr3_1:74694631-74694650 | Msa0375090:intron | 40.0% | |
| TTACAGATAGTGTTTGGCAG+TGG | + | chr3_1:74695330-74695349 | Msa0375090:intron | 40.0% | |
| CATTCATTTATTGCCAAGGG+AGG | + | chr3_1:74695475-74695494 | Msa0375090:intron | 40.0% | |
| TTCATTTATTGCCAAGGGAG+GGG | + | chr3_1:74695477-74695496 | Msa0375090:intron | 40.0% | |
| AGTTCATGGTTCCACATAAG+TGG | + | chr3_1:74695618-74695637 | Msa0375090:CDS | 40.0% | |
| CATGGAAAAGAAAACCGGAA+TGG | - | chr3_1:74696203-74696222 | None:intergenic | 40.0% | |
| CGTTTGATCTCGATTGATCA+TGG | - | chr3_1:74696221-74696240 | None:intergenic | 40.0% | |
| TGATCAATCGAGATCAAACG+AGG | + | chr3_1:74696221-74696240 | Msa0375090:CDS | 40.0% | |
| GATCAATCGAGATCAAACGA+GGG | + | chr3_1:74696222-74696241 | Msa0375090:CDS | 40.0% | |
| TAATCCTGGTCCAACAATCG+TGG | - | chr3_1:74694397-74694416 | None:intergenic | 45.0% | |
| GATGAGCCATGAAGAGACAT+GGG | - | chr3_1:74694525-74694544 | None:intergenic | 45.0% | |
| ACCAATCATGCCCTAGTGAA+TGG | + | chr3_1:74694587-74694606 | Msa0375090:intron | 45.0% | |
| TCCATTCACTAGGGCATGAT+TGG | - | chr3_1:74694591-74694610 | None:intergenic | 45.0% | |
| AATCATGCCCTAGTGAATGG+AGG | + | chr3_1:74694590-74694609 | Msa0375090:intron | 45.0% | |
| CAACGTACCTCCATTCACTA+GGG | - | chr3_1:74694600-74694619 | None:intergenic | 45.0% | |
| CGGAGCCAGGATAAATATCA+AGG | + | chr3_1:74694630-74694649 | Msa0375090:intron | 45.0% | |
| GCCAGGATAAATATCAAGGG+TGG | + | chr3_1:74694634-74694653 | Msa0375090:intron | 45.0% | |
| GCCACCCTTGATATTTATCC+TGG | - | chr3_1:74694638-74694657 | None:intergenic | 45.0% | |
| CCATGAAGCTTGTGAGAACA+AGG | - | chr3_1:74694930-74694949 | None:intergenic | 45.0% | |
| CCTTGTTCTCACAAGCTTCA+TGG | + | chr3_1:74694927-74694946 | Msa0375090:intron | 45.0% | |
| AAGTGATTGTGGTGCAACCA+GGG | - | chr3_1:74695557-74695576 | None:intergenic | 45.0% | |
| CTTCGTTGTGCAAGTGATTG+TGG | - | chr3_1:74695568-74695587 | None:intergenic | 45.0% | |
| AATCACTTGCACAACGAAGC+AGG | + | chr3_1:74695569-74695588 | Msa0375090:CDS | 45.0% | |
| ATCACTTGCACAACGAAGCA+GGG | + | chr3_1:74695570-74695589 | Msa0375090:CDS | 45.0% | |
| TGCTGTACTGTCGAAGTTCA+TGG | + | chr3_1:74695604-74695623 | Msa0375090:CDS | 45.0% | |
| TTTACTGTCTGTCTCGTTGC+TGG | + | chr3_1:74695669-74695688 | Msa0375090:intron | 45.0% | |
| AGGATGCCTAACTTCTGAAC+AGG | + | chr3_1:74696038-74696057 | Msa0375090:intron | 45.0% | |
| TGCCTAACTTCTGAACAGGA+TGG | + | chr3_1:74696042-74696061 | Msa0375090:intron | 45.0% | |
| GCCTAACTTCTGAACAGGAT+GGG | + | chr3_1:74696043-74696062 | Msa0375090:intron | 45.0% | |
| CCTAACTTCTGAACAGGATG+GGG | + | chr3_1:74696044-74696063 | Msa0375090:intron | 45.0% | |
| CTCTTGATGCTTCCTCTAAC+CGG | + | chr3_1:74696115-74696134 | Msa0375090:CDS | 45.0% | |
| TGTCTGCTGCAGACTTAGAT+TGG | + | chr3_1:74696167-74696186 | Msa0375090:CDS | 45.0% | |
| TAATCCTGGTCCAACAATCG+TGG | - | chr3_1:74694397-74694416 | None:intergenic | 45.0% | |
| GATGAGCCATGAAGAGACAT+GGG | - | chr3_1:74694525-74694544 | None:intergenic | 45.0% | |
| ACCAATCATGCCCTAGTGAA+TGG | + | chr3_1:74694587-74694606 | Msa0375090:intron | 45.0% | |
| TCCATTCACTAGGGCATGAT+TGG | - | chr3_1:74694591-74694610 | None:intergenic | 45.0% | |
| AATCATGCCCTAGTGAATGG+AGG | + | chr3_1:74694590-74694609 | Msa0375090:intron | 45.0% | |
| CAACGTACCTCCATTCACTA+GGG | - | chr3_1:74694600-74694619 | None:intergenic | 45.0% | |
| CGGAGCCAGGATAAATATCA+AGG | + | chr3_1:74694630-74694649 | Msa0375090:intron | 45.0% | |
| GCCAGGATAAATATCAAGGG+TGG | + | chr3_1:74694634-74694653 | Msa0375090:intron | 45.0% | |
| GCCACCCTTGATATTTATCC+TGG | - | chr3_1:74694638-74694657 | None:intergenic | 45.0% | |
| CCATGAAGCTTGTGAGAACA+AGG | - | chr3_1:74694930-74694949 | None:intergenic | 45.0% | |
| CCTTGTTCTCACAAGCTTCA+TGG | + | chr3_1:74694927-74694946 | Msa0375090:intron | 45.0% | |
| AAGTGATTGTGGTGCAACCA+GGG | - | chr3_1:74695557-74695576 | None:intergenic | 45.0% | |
| CTTCGTTGTGCAAGTGATTG+TGG | - | chr3_1:74695568-74695587 | None:intergenic | 45.0% | |
| AATCACTTGCACAACGAAGC+AGG | + | chr3_1:74695569-74695588 | Msa0375090:CDS | 45.0% | |
| ATCACTTGCACAACGAAGCA+GGG | + | chr3_1:74695570-74695589 | Msa0375090:CDS | 45.0% | |
| TGCTGTACTGTCGAAGTTCA+TGG | + | chr3_1:74695604-74695623 | Msa0375090:CDS | 45.0% | |
| TTTACTGTCTGTCTCGTTGC+TGG | + | chr3_1:74695669-74695688 | Msa0375090:intron | 45.0% | |
| AGGATGCCTAACTTCTGAAC+AGG | + | chr3_1:74696038-74696057 | Msa0375090:intron | 45.0% | |
| TGCCTAACTTCTGAACAGGA+TGG | + | chr3_1:74696042-74696061 | Msa0375090:intron | 45.0% | |
| GCCTAACTTCTGAACAGGAT+GGG | + | chr3_1:74696043-74696062 | Msa0375090:intron | 45.0% | |
| CCTAACTTCTGAACAGGATG+GGG | + | chr3_1:74696044-74696063 | Msa0375090:intron | 45.0% | |
| CTCTTGATGCTTCCTCTAAC+CGG | + | chr3_1:74696115-74696134 | Msa0375090:CDS | 45.0% | |
| TGTCTGCTGCAGACTTAGAT+TGG | + | chr3_1:74696167-74696186 | Msa0375090:CDS | 45.0% | |
| !! | TGTATATTATAAAAATAAAA+AGG | + | chr3_1:74695441-74695460 | Msa0375090:intron | 5.0% |
| !! | TGTATATTATAAAAATAAAA+AGG | + | chr3_1:74695441-74695460 | Msa0375090:intron | 5.0% |
| CCAACAATCGTGGTTGCAAC+TGG | - | chr3_1:74694387-74694406 | None:intergenic | 50.0% | |
| CCAGTTGCAACCACGATTGT+TGG | + | chr3_1:74694384-74694403 | Msa0375090:CDS | 50.0% | |
| TGAATACAGCATTCTGGGCG+AGG | - | chr3_1:74694441-74694460 | None:intergenic | 50.0% | |
| AAGAGACATGGGATGCGACA+CGG | - | chr3_1:74694514-74694533 | None:intergenic | 50.0% | |
| TCGCATCCCATGTCTCTTCA+TGG | + | chr3_1:74694516-74694535 | Msa0375090:intron | 50.0% | |
| GGATGAGCCATGAAGAGACA+TGG | - | chr3_1:74694526-74694545 | None:intergenic | 50.0% | |
| GCAACGTACCTCCATTCACT+AGG | - | chr3_1:74694601-74694620 | None:intergenic | 50.0% | |
| TGGCTGCAGAGTCATGTTTG+TGG | - | chr3_1:74695198-74695217 | None:intergenic | 50.0% | |
| ATTTATTGCCAAGGGAGGGG+TGG | + | chr3_1:74695480-74695499 | Msa0375090:intron | 50.0% | |
| CAAGTGATTGTGGTGCAACC+AGG | - | chr3_1:74695558-74695577 | None:intergenic | 50.0% | |
| CCCCATCCTGTTCAGAAGTT+AGG | - | chr3_1:74696047-74696066 | None:intergenic | 50.0% | |
| AACTTCTGAACAGGATGGGG+TGG | + | chr3_1:74696047-74696066 | Msa0375090:intron | 50.0% | |
| !! | CGGTTAGAGGAAGCATCAAG+AGG | - | chr3_1:74696117-74696136 | None:intergenic | 50.0% |
| TTGATGCTTCCTCTAACCGG+AGG | + | chr3_1:74696118-74696137 | Msa0375090:CDS | 50.0% | |
| TGATGCTTCCTCTAACCGGA+GGG | + | chr3_1:74696119-74696138 | Msa0375090:CDS | 50.0% | |
| TTGGTGCGCCATTTCCATTC+CGG | + | chr3_1:74696186-74696205 | Msa0375090:CDS | 50.0% | |
| CCAACAATCGTGGTTGCAAC+TGG | - | chr3_1:74694387-74694406 | None:intergenic | 50.0% | |
| CCAGTTGCAACCACGATTGT+TGG | + | chr3_1:74694384-74694403 | Msa0375090:CDS | 50.0% | |
| TGAATACAGCATTCTGGGCG+AGG | - | chr3_1:74694441-74694460 | None:intergenic | 50.0% | |
| AAGAGACATGGGATGCGACA+CGG | - | chr3_1:74694514-74694533 | None:intergenic | 50.0% | |
| TCGCATCCCATGTCTCTTCA+TGG | + | chr3_1:74694516-74694535 | Msa0375090:intron | 50.0% | |
| GGATGAGCCATGAAGAGACA+TGG | - | chr3_1:74694526-74694545 | None:intergenic | 50.0% | |
| GCAACGTACCTCCATTCACT+AGG | - | chr3_1:74694601-74694620 | None:intergenic | 50.0% | |
| TGGCTGCAGAGTCATGTTTG+TGG | - | chr3_1:74695198-74695217 | None:intergenic | 50.0% | |
| ATTTATTGCCAAGGGAGGGG+TGG | + | chr3_1:74695480-74695499 | Msa0375090:intron | 50.0% | |
| CAAGTGATTGTGGTGCAACC+AGG | - | chr3_1:74695558-74695577 | None:intergenic | 50.0% | |
| CCCCATCCTGTTCAGAAGTT+AGG | - | chr3_1:74696047-74696066 | None:intergenic | 50.0% | |
| AACTTCTGAACAGGATGGGG+TGG | + | chr3_1:74696047-74696066 | Msa0375090:intron | 50.0% | |
| !! | CGGTTAGAGGAAGCATCAAG+AGG | - | chr3_1:74696117-74696136 | None:intergenic | 50.0% |
| TTGATGCTTCCTCTAACCGG+AGG | + | chr3_1:74696118-74696137 | Msa0375090:CDS | 50.0% | |
| TGATGCTTCCTCTAACCGGA+GGG | + | chr3_1:74696119-74696138 | Msa0375090:CDS | 50.0% | |
| TTGGTGCGCCATTTCCATTC+CGG | + | chr3_1:74696186-74696205 | Msa0375090:CDS | 50.0% | |
| GCAACCACGATTGTTGGACC+AGG | + | chr3_1:74694390-74694409 | Msa0375090:CDS | 55.0% | |
| AGAGACATGGGATGCGACAC+GGG | - | chr3_1:74694513-74694532 | None:intergenic | 55.0% | |
| ! | AATGGAGGTACGTTGCACCC+AGG | + | chr3_1:74694605-74694624 | Msa0375090:intron | 55.0% |
| ! | ATGGAGGTACGTTGCACCCA+GGG | + | chr3_1:74694606-74694625 | Msa0375090:intron | 55.0% |
| TTTATCCTGGCTCCGTCCCT+GGG | - | chr3_1:74694625-74694644 | None:intergenic | 55.0% | |
| ATTTATCCTGGCTCCGTCCC+TGG | - | chr3_1:74694626-74694645 | None:intergenic | 55.0% | |
| ATTATAGGTGGCTCCGTCCC+TGG | + | chr3_1:74695537-74695556 | Msa0375090:intron | 55.0% | |
| GATTGTGGTGCAACCAGGGA+CGG | - | chr3_1:74695553-74695572 | None:intergenic | 55.0% | |
| AGCTCATTCCCTCCGGTTAG+AGG | - | chr3_1:74696130-74696149 | None:intergenic | 55.0% | |
| GCAACCACGATTGTTGGACC+AGG | + | chr3_1:74694390-74694409 | Msa0375090:CDS | 55.0% | |
| AGAGACATGGGATGCGACAC+GGG | - | chr3_1:74694513-74694532 | None:intergenic | 55.0% | |
| ! | AATGGAGGTACGTTGCACCC+AGG | + | chr3_1:74694605-74694624 | Msa0375090:intron | 55.0% |
| ! | ATGGAGGTACGTTGCACCCA+GGG | + | chr3_1:74694606-74694625 | Msa0375090:intron | 55.0% |
| TTTATCCTGGCTCCGTCCCT+GGG | - | chr3_1:74694625-74694644 | None:intergenic | 55.0% | |
| ATTTATCCTGGCTCCGTCCC+TGG | - | chr3_1:74694626-74694645 | None:intergenic | 55.0% | |
| ATTATAGGTGGCTCCGTCCC+TGG | + | chr3_1:74695537-74695556 | Msa0375090:intron | 55.0% | |
| GATTGTGGTGCAACCAGGGA+CGG | - | chr3_1:74695553-74695572 | None:intergenic | 55.0% | |
| AGCTCATTCCCTCCGGTTAG+AGG | - | chr3_1:74696130-74696149 | None:intergenic | 55.0% | |
| AGGTACGTTGCACCCAGGGA+CGG | + | chr3_1:74694610-74694629 | Msa0375090:intron | 60.0% | |
| AATGATCGCCACCCCTCCCT+TGG | - | chr3_1:74695491-74695510 | None:intergenic | 60.0% | |
| AGGTACGTTGCACCCAGGGA+CGG | + | chr3_1:74694610-74694629 | Msa0375090:intron | 60.0% | |
| AATGATCGCCACCCCTCCCT+TGG | - | chr3_1:74695491-74695510 | None:intergenic | 60.0% | |
| TGAACAGGATGGGGTGGCCG+AGG | + | chr3_1:74696053-74696072 | Msa0375090:intron | 65.0% | |
| GAACAGGATGGGGTGGCCGA+GGG | + | chr3_1:74696054-74696073 | Msa0375090:intron | 65.0% | |
| TGAACAGGATGGGGTGGCCG+AGG | + | chr3_1:74696053-74696072 | Msa0375090:intron | 65.0% | |
| GAACAGGATGGGGTGGCCGA+GGG | + | chr3_1:74696054-74696073 | Msa0375090:intron | 65.0% | |
| TTGCACCCAGGGACGGAGCC+AGG | + | chr3_1:74694617-74694636 | Msa0375090:intron | 70.0% | |
| TTGCACCCAGGGACGGAGCC+AGG | + | chr3_1:74694617-74694636 | Msa0375090:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 74694373 | 74696276 | 74694373 | ID=Msa0375090;Name=Msa0375090 |
| chr3_1 | mRNA | 74694373 | 74696276 | 74694373 | ID=Msa0375090-mRNA-1;Parent=Msa0375090;Name=Msa0375090-mRNA-1;_AED=0.47;_eAED=0.60;_QI=0|0|0|1|0|0|3|0|150 |
| chr3_1 | exon | 74694373 | 74694512 | 74694373 | ID=Msa0375090-mRNA-1:exon:17465;Parent=Msa0375090-mRNA-1 |
| chr3_1 | exon | 74695544 | 74695639 | 74695544 | ID=Msa0375090-mRNA-1:exon:17466;Parent=Msa0375090-mRNA-1 |
| chr3_1 | exon | 74696060 | 74696276 | 74696060 | ID=Msa0375090-mRNA-1:exon:17467;Parent=Msa0375090-mRNA-1 |
| chr3_1 | CDS | 74694373 | 74694512 | 74694373 | ID=Msa0375090-mRNA-1:cds;Parent=Msa0375090-mRNA-1 |
| chr3_1 | CDS | 74695544 | 74695639 | 74695544 | ID=Msa0375090-mRNA-1:cds;Parent=Msa0375090-mRNA-1 |
| chr3_1 | CDS | 74696060 | 74696276 | 74696060 | ID=Msa0375090-mRNA-1:cds;Parent=Msa0375090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
