AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072370 MtrunA17_Chr1g0179191 96.525 518 9 3 1 516 1 511 0.0 1038
Msa0072370 MtrunA17_Chr7g0265831 51.287 544 148 18 14 515 6 474 4.66e-152 443
Msa0072370 MtrunA17_Chr1g0198171 39.750 400 172 14 25 379 10 385 9.58e-78 252
Msa0072370 MtrunA17_Chr1g0201911 32.542 295 162 4 136 402 55 340 1.29e-35 140
Msa0072370 MtrunA17_Chr1g0201911 40.458 131 71 4 125 254 361 485 3.45e-22 100
Msa0072370 MtrunA17_Chr6g0463941 66.667 96 29 2 129 222 46 140 2.62e-33 134
Msa0072370 MtrunA17_Chr6g0463941 47.312 93 47 2 132 223 460 551 4.73e-20 93.6
Msa0072370 MtrunA17_Chr1g0201941 65.263 95 30 2 130 222 49 142 1.09e-32 132
Msa0072370 MtrunA17_Chr1g0201941 46.000 100 51 3 127 225 446 543 2.07e-20 94.7
Msa0072370 MtrunA17_Chr1g0201941 39.535 86 52 0 290 375 272 357 1.74e-13 73.2
Msa0072370 MtrunA17_Chr1g0190851 29.046 241 145 8 137 371 104 324 1.35e-14 76.3
Msa0072370 MtrunA17_Chr1g0190851 37.607 117 58 4 136 238 418 533 2.29e-12 69.3
Msa0072370 MtrunA17_Chr7g0273941 36.220 127 70 3 109 225 354 479 1.57e-14 75.9
Msa0072370 MtrunA17_Chr2g0290511 38.053 113 65 3 131 239 257 368 3.92e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072370 AT5G03680.1 57.003 307 106 8 136 420 119 421 5.71e-100 313
Msa0072370 AT3G10000.1 43.946 446 199 13 103 513 49 478 1.10e-98 306
Msa0072370 AT3G10000.2 41.928 446 198 14 103 513 49 468 2.94e-88 279
Msa0072370 AT1G76890.2 33.654 312 135 7 129 375 34 338 2.00e-39 151
Msa0072370 AT1G76890.2 45.098 102 54 2 133 233 394 494 3.58e-19 91.3
Msa0072370 AT1G76880.1 63.918 97 32 2 136 232 61 154 1.42e-31 129
Msa0072370 AT1G76880.1 44.538 119 55 4 117 225 380 497 8.06e-19 90.1
Msa0072370 AT1G33240.3 64.368 87 30 1 136 222 62 147 1.29e-29 123
Msa0072370 AT1G33240.3 43.820 89 48 2 136 223 435 522 1.89e-16 82.8
Msa0072370 AT1G33240.1 64.368 87 30 1 136 222 62 147 1.62e-29 123
Msa0072370 AT1G33240.1 43.820 89 48 2 136 223 435 522 1.69e-16 83.2
Msa0072370 AT1G33240.2 43.820 89 48 2 136 223 396 483 2.01e-16 82.8
Msa0072370 AT1G33240.2 72.340 47 13 0 176 222 62 108 2.79e-15 79.3
Msa0072370 AT5G28300.1 39.604 101 49 4 136 225 459 558 1.27e-12 70.9
Msa0072370 AT5G47660.1 42.857 91 44 4 136 223 303 388 1.79e-11 66.6

Find 168 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTAGCTTCTTTAAATTT+AGG 0.106926 1_2:-45229869 None:intergenic
ACATGTATTTGATGTGTTTA+AGG 0.119061 1_2:+45232273 Msa0072370:three_prime_UTR
GGAAATTTGTGGGAGAATTT+TGG 0.154763 1_2:+45232028 Msa0072370:CDS
ATTATTGTTGTTGACAAAAT+TGG 0.173365 1_2:-45231237 None:intergenic
GGAAAAGTTCACTTGCTTAT+TGG 0.193573 1_2:+45232346 Msa0072370:three_prime_UTR
CTCTCATCAGTTAATGGTTT+TGG 0.213143 1_2:-45232072 None:intergenic
TCCTGAGACCACAGGTTATA+TGG 0.215513 1_2:+45229772 Msa0072370:CDS
CATAAACTCTCATCAGTTAA+TGG 0.217027 1_2:-45232078 None:intergenic
ATGGAAGCTTTGAAGAATTT+AGG 0.224314 1_2:+45231635 Msa0072370:CDS
CTCTTAATTATGACCCATTT+GGG 0.226325 1_2:-45232859 None:intergenic
AGCAAGGGATGCTGCTTTAA+TGG 0.232544 1_2:+45231616 Msa0072370:CDS
CGTCAACTTGAAGCTTTATA+TGG 0.241815 1_2:+45231182 Msa0072370:CDS
GATTAGCTTCTTTAAATTTA+GGG 0.283381 1_2:-45229868 None:intergenic
GGCATGATGGTAAGCATTAC+AGG 0.285238 1_2:+45231153 Msa0072370:CDS
ATGATTCTAAAGAAGGAAAT+AGG 0.287382 1_2:+45231804 Msa0072370:CDS
CATGTATTTGATGTGTTTAA+GGG 0.291153 1_2:+45232274 Msa0072370:three_prime_UTR
TTGTTGACAAAATTGGTTTC+TGG 0.294784 1_2:-45231230 None:intergenic
CCTCTTAATTATGACCCATT+TGG 0.302296 1_2:-45232860 None:intergenic
TATGATCATTGTGAGGGTTT+TGG 0.304071 1_2:-45231286 None:intergenic
AGGAGGTAGAGAAATGATTA+AGG 0.310468 1_2:+45231655 Msa0072370:CDS
GAATTGCATTAAAGATTATA+AGG 0.321400 1_2:+45232882 Msa0072370:three_prime_UTR
TCTCATACTGTTGTTGTTGT+TGG 0.335695 1_2:-45229628 None:intergenic
GCTTCTTTAGTGTGCTGTTT+GGG 0.336131 1_2:+45232508 Msa0072370:three_prime_UTR
GATCCTGTCGTGCAGGAAAA+AGG 0.344541 1_2:-45229270 None:intergenic
TTTGGCTATTACTTGTTTGT+TGG 0.348056 1_2:-45231268 None:intergenic
GTTGTTGTTATTGTTGTTGA+AGG 0.351204 1_2:-45229719 None:intergenic
CTGTCGGTATAGATGGGAAA+TGG 0.365777 1_2:-45229517 None:intergenic
CAAATACATGTTTGGAATCA+TGG 0.367407 1_2:-45232261 None:intergenic
GTTTCTGTGTATTGATCATA+TGG 0.368157 1_2:+45232560 Msa0072370:three_prime_UTR
AAGGGTGTAAATGTAATAAC+TGG 0.373539 1_2:+45231698 Msa0072370:CDS
GATCGATCTAAATCCATGTT+TGG 0.373856 1_2:+45232125 Msa0072370:three_prime_UTR
TGCTTCTTTAGTGTGCTGTT+TGG 0.375364 1_2:+45232507 Msa0072370:three_prime_UTR
AAACACATCAAATACATGTT+TGG 0.382363 1_2:-45232269 None:intergenic
TATTACTTGTTTGTTGGAAA+TGG 0.383105 1_2:-45231262 None:intergenic
TGGTTTCTGGTAGAGAAGTT+TGG 0.387708 1_2:-45231217 None:intergenic
TTTACTTTAATGCATGAAGA+TGG 0.394689 1_2:+45232396 Msa0072370:three_prime_UTR
TTTAAAGAAGCTAATCAAAA+AGG 0.402136 1_2:+45229875 Msa0072370:CDS
AGAGTAGTGGAAGAAGAAGT+TGG 0.406533 1_2:+45231393 Msa0072370:CDS
CATCGTTTGATCACCCCAAA+TGG 0.411468 1_2:+45232845 Msa0072370:three_prime_UTR
TCACCTTCTGATTCTAATGT+TGG 0.411980 1_2:+45231956 Msa0072370:CDS
GTAGCCGCTGTCGGTATAGA+TGG 0.413426 1_2:-45229524 None:intergenic
TTAACAAAGCTGTCAGATTC+CGG 0.414479 1_2:-45229568 None:intergenic
GTTTGGATTGACAGTGAGTT+CGG 0.419513 1_2:+45232142 Msa0072370:three_prime_UTR
AGAGTAAGAGTTTCTTGTCT+TGG 0.432446 1_2:-45229821 None:intergenic
CCCATATAACCTGTGGTCTC+AGG 0.433556 1_2:-45229773 None:intergenic
TGAAGAGGCTCATGATCATA+AGG 0.441354 1_2:+45231679 Msa0072370:CDS
TTGAGTTAGTAGTGAGACTA+AGG 0.450800 1_2:-45231310 None:intergenic
CCAAATGGGTCATAATTAAG+AGG 0.452470 1_2:+45232860 Msa0072370:three_prime_UTR
ATTCAAAATCAAAATGAAGA+TGG 0.456037 1_2:+45231728 Msa0072370:CDS
TTTGGAGTAATGAGAGAGCA+TGG 0.461952 1_2:+45231588 Msa0072370:CDS
AGAATAGAACCAATGTCTAT+AGG 0.461959 1_2:-45232956 None:intergenic
CCAAGGGATGATTCTAAAGA+AGG 0.465100 1_2:+45231797 Msa0072370:CDS
CATATTGTTGTTGCTGCTGT+TGG 0.466902 1_2:-45229460 None:intergenic
GTTGTTGCTGCTGTTGGTGA+TGG 0.468711 1_2:-45229454 None:intergenic
GTTTAGTGATGGAGATAAAG+TGG 0.469595 1_2:+45232325 Msa0072370:three_prime_UTR
GTTATTATGTTTACATCAGT+TGG 0.471072 1_2:+45232459 Msa0072370:three_prime_UTR
AAGACAAAAGAAGGTAAAGC+AGG 0.472275 1_2:+45231128 Msa0072370:CDS
TTGGAATATGACAAAAGATC+AGG 0.472707 1_2:+45232365 Msa0072370:three_prime_UTR
ATTGTTGTTGAAGGTGGTGG+TGG 0.473372 1_2:-45229710 None:intergenic
AGAAGGAAATAGGAAGAGAA+AGG 0.474101 1_2:+45231814 Msa0072370:CDS
GTTATTGTTGTTGAAGGTGG+TGG 0.474694 1_2:-45229713 None:intergenic
AATGTTGGAAATGTTGCTAA+TGG 0.476371 1_2:+45231971 Msa0072370:CDS
ATCTATACCGACAGCGGCTA+CGG 0.482932 1_2:+45229526 Msa0072370:CDS
GGAGGAAACAAGAGGCCAAA+AGG 0.485530 1_2:+45231546 Msa0072370:CDS
TTACTTTAATGCATGAAGAT+GGG 0.488805 1_2:+45232397 Msa0072370:three_prime_UTR
AGCTGTCAGATTCCGGTGAC+CGG 0.495878 1_2:-45229561 None:intergenic
GTTGTTATTGTTGTTGAAGG+TGG 0.496177 1_2:-45229716 None:intergenic
AAGGCTCAAGTTTGAAGCTA+AGG 0.497088 1_2:-45229251 None:intergenic
GATACGTCGTCGTCTGATGA+TGG 0.498562 1_2:+45231347 Msa0072370:CDS
CTTTCCTTTCATGATTAGTG+AGG 0.500450 1_2:+45232003 Msa0072370:CDS
CCTGAGACCACAGGTTATAT+GGG 0.501183 1_2:+45229773 Msa0072370:CDS
GATCTAAGACAGCTAGTGAA+TGG 0.501254 1_2:+45229482 Msa0072370:CDS
GACACTTGAGGACAAGGAAA+AGG 0.501629 1_2:+45231499 Msa0072370:CDS
CATGTATATATGAGAGGCTA+GGG 0.504957 1_2:-45229382 None:intergenic
GGGCGTTAAGAGAAGAAGAG+TGG 0.505945 1_2:+45231525 Msa0072370:CDS
TCATGTATATATGAGAGGCT+AGG 0.508330 1_2:-45229383 None:intergenic
TTCAAAATCAAAATGAAGAT+GGG 0.510698 1_2:+45231729 Msa0072370:CDS
CCTTCTTTAGAATCATCCCT+TGG 0.513704 1_2:-45231797 None:intergenic
CAATGCTCTATGTACAATCA+AGG 0.518449 1_2:+45231863 Msa0072370:CDS
GAAGAAAGCAGCGGCAGAGT+CGG 0.518458 1_2:-45229292 None:intergenic
GGTGATGACCATGATTGTTA+TGG 0.519317 1_2:-45229421 None:intergenic
AATGTGTTCAAGTTTAGTGA+TGG 0.522877 1_2:+45232314 Msa0072370:three_prime_UTR
GCTGCTGTTGGTGATGGTGA+TGG 0.523244 1_2:-45229448 None:intergenic
CTAGAGACTTCATCCCATAA+AGG 0.525783 1_2:-45229899 None:intergenic
ATCGTTTGATCACCCCAAAT+GGG 0.529797 1_2:+45232846 Msa0072370:three_prime_UTR
TTGTCTTGGCCATCTTCCAG+TGG 0.530040 1_2:-45229807 None:intergenic
TAGTGAGGGTGGAAATTTGT+GGG 0.530887 1_2:+45232018 Msa0072370:CDS
TGTCGGTATAGATGGGAAAT+GGG 0.531485 1_2:-45229516 None:intergenic
GTTGGTGATGGTGATGGTGA+GGG 0.532276 1_2:-45229442 None:intergenic
AACTCATCCGTAGCCGCTGT+CGG 0.532933 1_2:-45229533 None:intergenic
TTTCCTTTCATGATTAGTGA+GGG 0.536493 1_2:+45232004 Msa0072370:CDS
AAACTACAAAGGAATGATCA+TGG 0.537652 1_2:+45231929 Msa0072370:CDS
TTGAGTCTTCCTATAGACAT+TGG 0.538253 1_2:+45232947 Msa0072370:three_prime_UTR
TATTACAAGAAGACAAAAGA+AGG 0.546022 1_2:+45231119 Msa0072370:CDS
AAGGGAAAGAAGAAGAGTAG+TGG 0.550255 1_2:+45231380 Msa0072370:CDS
AAACATGGATTTAGATCGAT+CGG 0.551290 1_2:-45232123 None:intergenic
TGAAGCTAAGGACATTGGTA+TGG 0.551512 1_2:-45229239 None:intergenic
CTTTATGGGATGAAGTCTCT+AGG 0.552690 1_2:+45229900 Msa0072370:CDS
GATGACCACCATAACAATCA+TGG 0.553172 1_2:+45229413 Msa0072370:CDS
AGAAATGATTAAGGTTGAAG+AGG 0.556408 1_2:+45231664 Msa0072370:CDS
GAGATGCATCCACTGGAAGA+TGG 0.561119 1_2:+45229798 Msa0072370:CDS
GAGGAAACAAGAGGCCAAAA+GGG 0.564460 1_2:+45231547 Msa0072370:CDS
GAAGCTTTGAAGAATTTAGG+AGG 0.565385 1_2:+45231638 Msa0072370:CDS
ATGGGTGGAGATGCATCCAC+TGG 0.565514 1_2:+45229791 Msa0072370:CDS
GGTAAAGCAGGAAGGCATGA+TGG 0.566904 1_2:+45231140 Msa0072370:CDS
GTTCTGATAATTGTACTCCA+AGG 0.568236 1_2:+45231780 Msa0072370:CDS
GATGTAAACATAATAACTGA+AGG 0.570199 1_2:-45232453 None:intergenic
CTAAAGAAGCATGAGGGGAA+AGG 0.570963 1_2:-45232495 None:intergenic
TAGTGGAAGAAGAAGTTGGA+AGG 0.571374 1_2:+45231397 Msa0072370:CDS
CCACCCTCACTAATCATGAA+AGG 0.571997 1_2:-45232007 None:intergenic
CCTTTCATGATTAGTGAGGG+TGG 0.572090 1_2:+45232007 Msa0072370:CDS
AGAGTCGGATCCTGTCGTGC+AGG 0.572753 1_2:-45229277 None:intergenic
TCTATGTACAATCAAGGAAG+TGG 0.573787 1_2:+45231869 Msa0072370:CDS
TTTCCAACATTAGAATCAGA+AGG 0.574657 1_2:-45231959 None:intergenic
CTGAAGAACATGGATATCAA+AGG 0.576035 1_2:+45231054 Msa0072370:CDS
CAGTATGAGATGATGATGCT+AGG 0.576911 1_2:+45229641 Msa0072370:CDS
GAGAGCATGGATTGAAGCAA+GGG 0.577276 1_2:+45231601 Msa0072370:CDS
TTCTGATAATTGTACTCCAA+GGG 0.579460 1_2:+45231781 Msa0072370:CDS
GGTTGAAGAAGTAATAAGTG+AGG 0.581187 1_2:-45229323 None:intergenic
GTTTCAACTCCTGAGACCAC+AGG 0.581549 1_2:+45229764 Msa0072370:CDS
GAAGAGGCTCATGATCATAA+GGG 0.582156 1_2:+45231680 Msa0072370:CDS
AGAGAGCATGGATTGAAGCA+AGG 0.583741 1_2:+45231600 Msa0072370:CDS
GTTGAAGAAGTAATAAGTGA+GGG 0.585125 1_2:-45229322 None:intergenic
CACTTGTGTACACACAGACA+TGG 0.589280 1_2:+45229214 Msa0072370:five_prime_UTR
TGTGAAGACACTTGAGGACA+AGG 0.590043 1_2:+45231493 Msa0072370:CDS
TAGCCGCTGTCGGTATAGAT+GGG 0.591582 1_2:-45229523 None:intergenic
GAACATGGATATCAAAGGAG+TGG 0.592797 1_2:+45231059 Msa0072370:CDS
GAAACAAGAGGCCAAAAGGG+TGG 0.597918 1_2:+45231550 Msa0072370:CDS
TAAGGCTATGATCATTGTGA+GGG 0.598377 1_2:-45231292 None:intergenic
AAGTTTGAAGCTAAGGACAT+TGG 0.602118 1_2:-45229244 None:intergenic
TGTTGGTGATGGTGATGGTG+AGG 0.604876 1_2:-45229443 None:intergenic
CAAAAGAAGGTAAAGCAGGA+AGG 0.606280 1_2:+45231132 Msa0072370:CDS
AGGATAATGTCTGAAGAACA+TGG 0.616822 1_2:+45231044 Msa0072370:intron
CTAAGGCTATGATCATTGTG+AGG 0.617388 1_2:-45231293 None:intergenic
AACACTAGCACTAGCAGTGG+TGG 0.618195 1_2:-45229744 None:intergenic
TGATGATGGCAATGATGTGA+AGG 0.618528 1_2:+45231361 Msa0072370:CDS
GATGACCATGATTGTTATGG+TGG 0.618743 1_2:-45229418 None:intergenic
CGTTAAGAGAAGAAGAGTGG+AGG 0.619013 1_2:+45231528 Msa0072370:CDS
ATGAGATTGTGAAACTACAA+AGG 0.619652 1_2:+45231918 Msa0072370:CDS
TAAACATGTACTGTGCATGC+AGG 0.622094 1_2:+45232531 Msa0072370:three_prime_UTR
ATGTAAACATAATAACTGAA+GGG 0.622934 1_2:-45232452 None:intergenic
AGCACACTAAAGAAGCATGA+GGG 0.623517 1_2:-45232501 None:intergenic
GACAGCTAGTGAATGGAACA+AGG 0.626911 1_2:+45229489 Msa0072370:CDS
ATCTTGAATAGTACTGTGAG+AGG 0.628009 1_2:+45231758 Msa0072370:CDS
AGAAGAGTGGAGGAAACAAG+AGG 0.631900 1_2:+45231538 Msa0072370:CDS
TCTTAATTATGACCCATTTG+GGG 0.634357 1_2:-45232858 None:intergenic
TGAGGACAAGGAAAAGGAGA+GGG 0.634562 1_2:+45231505 Msa0072370:CDS
TTGTCAAAACTACGATGGCG+TGG 0.637473 1_2:+45232703 Msa0072370:three_prime_UTR
GAAGCTTGTGGAGAAGCAAG+AGG 0.641062 1_2:+45231454 Msa0072370:CDS
GAGATGATGATGCTAGGTCG+TGG 0.645971 1_2:+45229647 Msa0072370:CDS
CAGCACACTAAAGAAGCATG+AGG 0.646704 1_2:-45232502 None:intergenic
GAGACCACAGGTTATATGGG+TGG 0.648008 1_2:+45229776 Msa0072370:CDS
ATACACATGCTAATAAACAA+AGG 0.648070 1_2:-45232603 None:intergenic
TGCACAAATGAAGAAGCTTG+TGG 0.649032 1_2:+45231442 Msa0072370:CDS
TTGTGGAGAAGCAAGAGGAG+TGG 0.656273 1_2:+45231459 Msa0072370:CDS
ATCTCCACCCATATAACCTG+TGG 0.658151 1_2:-45229780 None:intergenic
ACTCACTGTCAATCCAAACA+TGG 0.659105 1_2:-45232138 None:intergenic
ACTTGTGTACACACAGACAT+GGG 0.659567 1_2:+45229215 Msa0072370:five_prime_UTR
CAACATTAATAAATATAGTG+AGG 0.660404 1_2:-45232921 None:intergenic
GGAGAGAGTGAAGAAAGCAG+CGG 0.666908 1_2:-45229301 None:intergenic
GCACACTAAAGAAGCATGAG+GGG 0.667380 1_2:-45232500 None:intergenic
TGAAACACTAGCACTAGCAG+TGG 0.671025 1_2:-45229747 None:intergenic
TTGAGGACAAGGAAAAGGAG+AGG 0.672502 1_2:+45231504 Msa0072370:CDS
GATGATGGCAATGATGTGAA+GGG 0.683964 1_2:+45231362 Msa0072370:CDS
TTAGTGAGGGTGGAAATTTG+TGG 0.685166 1_2:+45232017 Msa0072370:CDS
TAAGCTTGTGAAGACACTTG+AGG 0.695179 1_2:+45231487 Msa0072370:CDS
ATGTCTATAGGAAGACTCAA+CGG 0.707472 1_2:-45232944 None:intergenic
TTTCCCATCTATACCGACAG+CGG 0.709498 1_2:+45229520 Msa0072370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGATGAAATTTAATAAA+GGG - chr1_2:45230503-45230522 None:intergenic 10.0%
!! GTAAAGATGAAATTTAATAA+AGG - chr1_2:45230504-45230523 None:intergenic 15.0%
!! AATTAATAATGACATTATTG+TGG - chr1_2:45230894-45230913 None:intergenic 15.0%
!! ATGAGATTGAAAAAAAAGAA+TGG - chr1_2:45229347-45229366 None:intergenic 20.0%
!!! TTTTTTCATGTATATATGAG+AGG - chr1_2:45229391-45229410 None:intergenic 20.0%
!! CTCATATATACATGAAAAAA+TGG + chr1_2:45229391-45229410 Msa0072370:exon 20.0%
!!! GATTAGCTTCTTTAAATTTA+GGG - chr1_2:45229871-45229890 None:intergenic 20.0%
!!! TGATTAGCTTCTTTAAATTT+AGG - chr1_2:45229872-45229891 None:intergenic 20.0%
!! TTTAAAGAAGCTAATCAAAA+AGG + chr1_2:45229875-45229894 Msa0072370:CDS 20.0%
!! ACATAAATTACATCTACATA+AGG - chr1_2:45230980-45230999 None:intergenic 20.0%
!!! ATATTTGTTTGATACCATTT+TGG + chr1_2:45231019-45231038 Msa0072370:intron 20.0%
!!! ATTATTGTTGTTGACAAAAT+TGG - chr1_2:45231240-45231259 None:intergenic 20.0%
!! ATTCAAAATCAAAATGAAGA+TGG + chr1_2:45231728-45231747 Msa0072370:CDS 20.0%
!! TTCAAAATCAAAATGAAGAT+GGG + chr1_2:45231729-45231748 Msa0072370:CDS 20.0%
!!! TTAAAGCTTTTACAAAATCA+CGG + chr1_2:45232211-45232230 Msa0072370:three_prime_UTR 20.0%
!! ATGTAAACATAATAACTGAA+GGG - chr1_2:45232455-45232474 None:intergenic 20.0%
!! GAATTGCATTAAAGATTATA+AGG + chr1_2:45232882-45232901 Msa0072370:three_prime_UTR 20.0%
!! CAACATTAATAAATATAGTG+AGG - chr1_2:45232924-45232943 None:intergenic 20.0%
! TAATCAAAAAGGTCCTTTAT+GGG + chr1_2:45229886-45229905 Msa0072370:CDS 25.0%
!!! TTGGAGTTAATTTGTTTGAT+GGG + chr1_2:45230210-45230229 Msa0072370:intron 25.0%
! GTTAAGCTTAAAATGAGTAT+AGG + chr1_2:45230296-45230315 Msa0072370:intron 25.0%
!! AAATTTTGCACTTAAAAGAG+GGG - chr1_2:45230476-45230495 None:intergenic 25.0%
!! CAAATTTTGCACTTAAAAGA+GGG - chr1_2:45230477-45230496 None:intergenic 25.0%
!! ACAAATTTTGCACTTAAAAG+AGG - chr1_2:45230478-45230497 None:intergenic 25.0%
!!! TAGTTATGTTTGCTATAACT+AGG + chr1_2:45230709-45230728 Msa0072370:intron 25.0%
! TATTACAAGAAGACAAAAGA+AGG + chr1_2:45231119-45231138 Msa0072370:CDS 25.0%
!! TATTACTTGTTTGTTGGAAA+TGG - chr1_2:45231265-45231284 None:intergenic 25.0%
!! TGGAAAAAGAACAAAAGTTT+TGG + chr1_2:45231570-45231589 Msa0072370:CDS 25.0%
!! ATGATTCTAAAGAAGGAAAT+AGG + chr1_2:45231804-45231823 Msa0072370:CDS 25.0%
!! CACAGTTTTTAACAAAATCA+GGG - chr1_2:45232186-45232205 None:intergenic 25.0%
!! TCACAGTTTTTAACAAAATC+AGG - chr1_2:45232187-45232206 None:intergenic 25.0%
! AAACACATCAAATACATGTT+TGG - chr1_2:45232272-45232291 None:intergenic 25.0%
! ACATGTATTTGATGTGTTTA+AGG + chr1_2:45232273-45232292 Msa0072370:three_prime_UTR 25.0%
! CATGTATTTGATGTGTTTAA+GGG + chr1_2:45232274-45232293 Msa0072370:three_prime_UTR 25.0%
! TTTACTTTAATGCATGAAGA+TGG + chr1_2:45232396-45232415 Msa0072370:three_prime_UTR 25.0%
! TTACTTTAATGCATGAAGAT+GGG + chr1_2:45232397-45232416 Msa0072370:three_prime_UTR 25.0%
! GATGTAAACATAATAACTGA+AGG - chr1_2:45232456-45232475 None:intergenic 25.0%
! GTTATTATGTTTACATCAGT+TGG + chr1_2:45232459-45232478 Msa0072370:three_prime_UTR 25.0%
! ATACACATGCTAATAAACAA+AGG - chr1_2:45232606-45232625 None:intergenic 25.0%
!! AATTTTTGTCAAAACTACGA+TGG + chr1_2:45232698-45232717 Msa0072370:three_prime_UTR 25.0%
GTTGAAGAAGTAATAAGTGA+GGG - chr1_2:45229325-45229344 None:intergenic 30.0%
! GTTGTTGTTATTGTTGTTGA+AGG - chr1_2:45229722-45229741 None:intergenic 30.0%
CTAATCAAAAAGGTCCTTTA+TGG + chr1_2:45229885-45229904 Msa0072370:CDS 30.0%
!! CTTGGAGTTAATTTGTTTGA+TGG + chr1_2:45230209-45230228 Msa0072370:intron 30.0%
!! TGGAGTTAATTTGTTTGATG+GGG + chr1_2:45230211-45230230 Msa0072370:intron 30.0%
!! TAATTTGTTTGATGGGGATT+CGG + chr1_2:45230217-45230236 Msa0072370:intron 30.0%
TAGCAAACATAACTAAGCAT+AGG - chr1_2:45230704-45230723 None:intergenic 30.0%
TCACATGATTAGACTTCTTT+AGG + chr1_2:45230803-45230822 Msa0072370:intron 30.0%
!!! TGTTTGATACCATTTTGGTT+AGG + chr1_2:45231024-45231043 Msa0072370:intron 30.0%
AGACATTATCCTAACCAAAA+TGG - chr1_2:45231036-45231055 None:intergenic 30.0%
! TTGTTGACAAAATTGGTTTC+TGG - chr1_2:45231233-45231252 None:intergenic 30.0%
TTTGGCTATTACTTGTTTGT+TGG - chr1_2:45231271-45231290 None:intergenic 30.0%
!! ATGGAAGCTTTGAAGAATTT+AGG + chr1_2:45231635-45231654 Msa0072370:CDS 30.0%
AGAAATGATTAAGGTTGAAG+AGG + chr1_2:45231664-45231683 Msa0072370:CDS 30.0%
! AAGGGTGTAAATGTAATAAC+TGG + chr1_2:45231698-45231717 Msa0072370:CDS 30.0%
TTCTGATAATTGTACTCCAA+GGG + chr1_2:45231781-45231800 Msa0072370:CDS 30.0%
ATGAGATTGTGAAACTACAA+AGG + chr1_2:45231918-45231937 Msa0072370:CDS 30.0%
AAACTACAAAGGAATGATCA+TGG + chr1_2:45231929-45231948 Msa0072370:CDS 30.0%
TTTCCAACATTAGAATCAGA+AGG - chr1_2:45231962-45231981 None:intergenic 30.0%
AATGTTGGAAATGTTGCTAA+TGG + chr1_2:45231971-45231990 Msa0072370:CDS 30.0%
TTTCCTTTCATGATTAGTGA+GGG + chr1_2:45232004-45232023 Msa0072370:CDS 30.0%
CATAAACTCTCATCAGTTAA+TGG - chr1_2:45232081-45232100 None:intergenic 30.0%
AAACATGGATTTAGATCGAT+CGG - chr1_2:45232126-45232145 None:intergenic 30.0%
! AGTTTTTAACAAAATCAGGG+TGG - chr1_2:45232183-45232202 None:intergenic 30.0%
! CAAATACATGTTTGGAATCA+TGG - chr1_2:45232264-45232283 None:intergenic 30.0%
! AATGTGTTCAAGTTTAGTGA+TGG + chr1_2:45232314-45232333 Msa0072370:three_prime_UTR 30.0%
TTGGAATATGACAAAAGATC+AGG + chr1_2:45232365-45232384 Msa0072370:three_prime_UTR 30.0%
! GTTTCTGTGTATTGATCATA+TGG + chr1_2:45232560-45232579 Msa0072370:three_prime_UTR 30.0%
TCTTAATTATGACCCATTTG+GGG - chr1_2:45232861-45232880 None:intergenic 30.0%
CTCTTAATTATGACCCATTT+GGG - chr1_2:45232862-45232881 None:intergenic 30.0%
AGAATAGAACCAATGTCTAT+AGG - chr1_2:45232959-45232978 None:intergenic 30.0%
! AAGTTTGAAGCTAAGGACAT+TGG - chr1_2:45229247-45229266 None:intergenic 35.0%
GGTTGAAGAAGTAATAAGTG+AGG - chr1_2:45229326-45229345 None:intergenic 35.0%
CATGTATATATGAGAGGCTA+GGG - chr1_2:45229385-45229404 None:intergenic 35.0%
TCATGTATATATGAGAGGCT+AGG - chr1_2:45229386-45229405 None:intergenic 35.0%
TTAACAAAGCTGTCAGATTC+CGG - chr1_2:45229571-45229590 None:intergenic 35.0%
! TTTTGATGTGTCTGTGGATT+AGG - chr1_2:45229608-45229627 None:intergenic 35.0%
! TCTCATACTGTTGTTGTTGT+TGG - chr1_2:45229631-45229650 None:intergenic 35.0%
! GTTGTTATTGTTGTTGAAGG+TGG - chr1_2:45229719-45229738 None:intergenic 35.0%
AGAGTAAGAGTTTCTTGTCT+TGG - chr1_2:45229824-45229843 None:intergenic 35.0%
TGAGTATGAAGAAGCTATGT+GGG - chr1_2:45229987-45230006 None:intergenic 35.0%
TTGAGTATGAAGAAGCTATG+TGG - chr1_2:45229988-45230007 None:intergenic 35.0%
! AATTTGTTTGATGGGGATTC+GGG + chr1_2:45230218-45230237 Msa0072370:intron 35.0%
TGGTGGAATCTTACTAAACT+TGG - chr1_2:45230422-45230441 None:intergenic 35.0%
TTGTAAGCAAATGCAGACAT+TGG - chr1_2:45230595-45230614 None:intergenic 35.0%
TATGAAATGACATCAAGCTG+AGG + chr1_2:45230620-45230639 Msa0072370:intron 35.0%
!! TCACACATTTCTAGCTAACT+AGG + chr1_2:45230841-45230860 Msa0072370:intron 35.0%
!! CACACATTTCTAGCTAACTA+GGG + chr1_2:45230842-45230861 Msa0072370:intron 35.0%
AGGATAATGTCTGAAGAACA+TGG + chr1_2:45231044-45231063 Msa0072370:intron 35.0%
CTGAAGAACATGGATATCAA+AGG + chr1_2:45231054-45231073 Msa0072370:CDS 35.0%
AAGACAAAAGAAGGTAAAGC+AGG + chr1_2:45231128-45231147 Msa0072370:CDS 35.0%
! CGTCAACTTGAAGCTTTATA+TGG + chr1_2:45231182-45231201 Msa0072370:CDS 35.0%
! TATGATCATTGTGAGGGTTT+TGG - chr1_2:45231289-45231308 None:intergenic 35.0%
TAAGGCTATGATCATTGTGA+GGG - chr1_2:45231295-45231314 None:intergenic 35.0%
TTGAGTTAGTAGTGAGACTA+AGG - chr1_2:45231313-45231332 None:intergenic 35.0%
! TTGTTCTTTTTCCACCCTTT+TGG - chr1_2:45231564-45231583 None:intergenic 35.0%
!! GAAGCTTTGAAGAATTTAGG+AGG + chr1_2:45231638-45231657 Msa0072370:CDS 35.0%
AGGAGGTAGAGAAATGATTA+AGG + chr1_2:45231655-45231674 Msa0072370:CDS 35.0%
ATCTTGAATAGTACTGTGAG+AGG + chr1_2:45231758-45231777 Msa0072370:CDS 35.0%
GTTCTGATAATTGTACTCCA+AGG + chr1_2:45231780-45231799 Msa0072370:CDS 35.0%
AGAAGGAAATAGGAAGAGAA+AGG + chr1_2:45231814-45231833 Msa0072370:CDS 35.0%
CAATGCTCTATGTACAATCA+AGG + chr1_2:45231863-45231882 Msa0072370:CDS 35.0%
TCTATGTACAATCAAGGAAG+TGG + chr1_2:45231869-45231888 Msa0072370:CDS 35.0%
TCACCTTCTGATTCTAATGT+TGG + chr1_2:45231956-45231975 Msa0072370:CDS 35.0%
CTTTCCTTTCATGATTAGTG+AGG + chr1_2:45232003-45232022 Msa0072370:CDS 35.0%
! GGAAATTTGTGGGAGAATTT+TGG + chr1_2:45232028-45232047 Msa0072370:CDS 35.0%
! CTCTCATCAGTTAATGGTTT+TGG - chr1_2:45232075-45232094 None:intergenic 35.0%
GATCGATCTAAATCCATGTT+TGG + chr1_2:45232125-45232144 Msa0072370:three_prime_UTR 35.0%
! GTTTAGTGATGGAGATAAAG+TGG + chr1_2:45232325-45232344 Msa0072370:three_prime_UTR 35.0%
GGAAAAGTTCACTTGCTTAT+TGG + chr1_2:45232346-45232365 Msa0072370:three_prime_UTR 35.0%
CCTCTTAATTATGACCCATT+TGG - chr1_2:45232863-45232882 None:intergenic 35.0%
CCAAATGGGTCATAATTAAG+AGG + chr1_2:45232860-45232879 Msa0072370:three_prime_UTR 35.0%
ATGTCTATAGGAAGACTCAA+CGG - chr1_2:45232947-45232966 None:intergenic 35.0%
TTGAGTCTTCCTATAGACAT+TGG + chr1_2:45232947-45232966 Msa0072370:three_prime_UTR 35.0%
ACTTGTGTACACACAGACAT+GGG + chr1_2:45229215-45229234 Msa0072370:five_prime_UTR 40.0%
TGAAGCTAAGGACATTGGTA+TGG - chr1_2:45229242-45229261 None:intergenic 40.0%
! AAGGCTCAAGTTTGAAGCTA+AGG - chr1_2:45229254-45229273 None:intergenic 40.0%
GATGACCACCATAACAATCA+TGG + chr1_2:45229413-45229432 Msa0072370:CDS 40.0%
GATGACCATGATTGTTATGG+TGG - chr1_2:45229421-45229440 None:intergenic 40.0%
GGTGATGACCATGATTGTTA+TGG - chr1_2:45229424-45229443 None:intergenic 40.0%
! CATATTGTTGTTGCTGCTGT+TGG - chr1_2:45229463-45229482 None:intergenic 40.0%
! GATCTAAGACAGCTAGTGAA+TGG + chr1_2:45229482-45229501 Msa0072370:CDS 40.0%
TGTCGGTATAGATGGGAAAT+GGG - chr1_2:45229519-45229538 None:intergenic 40.0%
!!! TGTTGGTTTTGATGTGTCTG+TGG - chr1_2:45229614-45229633 None:intergenic 40.0%
! CAGTATGAGATGATGATGCT+AGG + chr1_2:45229641-45229660 Msa0072370:CDS 40.0%
! GTTATTGTTGTTGAAGGTGG+TGG - chr1_2:45229716-45229735 None:intergenic 40.0%
CTAGAGACTTCATCCCATAA+AGG - chr1_2:45229902-45229921 None:intergenic 40.0%
CTTTATGGGATGAAGTCTCT+AGG + chr1_2:45229900-45229919 Msa0072370:CDS 40.0%
TGAAATGACATGACTGCACT+TGG + chr1_2:45230191-45230210 Msa0072370:intron 40.0%
AAAGTGGAAAAACGAGACAG+TGG - chr1_2:45230442-45230461 None:intergenic 40.0%
! AGGGGTACAAAGTTTCAAAG+TGG - chr1_2:45230458-45230477 None:intergenic 40.0%
AGCAAATGCAGACATTGGAA+TGG - chr1_2:45230590-45230609 None:intergenic 40.0%
ACAACAAAAACGTCAGTGCA+TGG + chr1_2:45230740-45230759 Msa0072370:intron 40.0%
GAACATGGATATCAAAGGAG+TGG + chr1_2:45231059-45231078 Msa0072370:CDS 40.0%
CAAAAGAAGGTAAAGCAGGA+AGG + chr1_2:45231132-45231151 Msa0072370:CDS 40.0%
!! TGGTTTCTGGTAGAGAAGTT+TGG - chr1_2:45231220-45231239 None:intergenic 40.0%
CTAAGGCTATGATCATTGTG+AGG - chr1_2:45231296-45231315 None:intergenic 40.0%
!! TGATGATGGCAATGATGTGA+AGG + chr1_2:45231361-45231380 Msa0072370:CDS 40.0%
! GATGATGGCAATGATGTGAA+GGG + chr1_2:45231362-45231381 Msa0072370:CDS 40.0%
AAGGGAAAGAAGAAGAGTAG+TGG + chr1_2:45231380-45231399 Msa0072370:CDS 40.0%
! AGAGTAGTGGAAGAAGAAGT+TGG + chr1_2:45231393-45231412 Msa0072370:CDS 40.0%
TAGTGGAAGAAGAAGTTGGA+AGG + chr1_2:45231397-45231416 Msa0072370:CDS 40.0%
TGCACAAATGAAGAAGCTTG+TGG + chr1_2:45231442-45231461 Msa0072370:CDS 40.0%
TAAGCTTGTGAAGACACTTG+AGG + chr1_2:45231487-45231506 Msa0072370:CDS 40.0%
! TTTGGAGTAATGAGAGAGCA+TGG + chr1_2:45231588-45231607 Msa0072370:CDS 40.0%
TGAAGAGGCTCATGATCATA+AGG + chr1_2:45231679-45231698 Msa0072370:CDS 40.0%
GAAGAGGCTCATGATCATAA+GGG + chr1_2:45231680-45231699 Msa0072370:CDS 40.0%
!! CCTTCTTTAGAATCATCCCT+TGG - chr1_2:45231800-45231819 None:intergenic 40.0%
! CCAAGGGATGATTCTAAAGA+AGG + chr1_2:45231797-45231816 Msa0072370:CDS 40.0%
TTAGTGAGGGTGGAAATTTG+TGG + chr1_2:45232017-45232036 Msa0072370:CDS 40.0%
TAGTGAGGGTGGAAATTTGT+GGG + chr1_2:45232018-45232037 Msa0072370:CDS 40.0%
ACTCACTGTCAATCCAAACA+TGG - chr1_2:45232141-45232160 None:intergenic 40.0%
GTTTGGATTGACAGTGAGTT+CGG + chr1_2:45232142-45232161 Msa0072370:three_prime_UTR 40.0%
! AGCACACTAAAGAAGCATGA+GGG - chr1_2:45232504-45232523 None:intergenic 40.0%
! TGCTTCTTTAGTGTGCTGTT+TGG + chr1_2:45232507-45232526 Msa0072370:three_prime_UTR 40.0%
!! GCTTCTTTAGTGTGCTGTTT+GGG + chr1_2:45232508-45232527 Msa0072370:three_prime_UTR 40.0%
TAAACATGTACTGTGCATGC+AGG + chr1_2:45232531-45232550 Msa0072370:three_prime_UTR 40.0%
ATCGTTTGATCACCCCAAAT+GGG + chr1_2:45232846-45232865 Msa0072370:three_prime_UTR 40.0%
CACTTGTGTACACACAGACA+TGG + chr1_2:45229214-45229233 Msa0072370:five_prime_UTR 45.0%
GACAGCTAGTGAATGGAACA+AGG + chr1_2:45229489-45229508 Msa0072370:CDS 45.0%
CTGTCGGTATAGATGGGAAA+TGG - chr1_2:45229520-45229539 None:intergenic 45.0%
TTTCCCATCTATACCGACAG+CGG + chr1_2:45229520-45229539 Msa0072370:CDS 45.0%
! GCTACGGATGAGTTTTTCTC+CGG + chr1_2:45229542-45229561 Msa0072370:CDS 45.0%
! ATGAGTTTTTCTCCGGTCAC+CGG + chr1_2:45229549-45229568 Msa0072370:CDS 45.0%
! ATTGTTGTTGAAGGTGGTGG+TGG - chr1_2:45229713-45229732 None:intergenic 45.0%
TGAAACACTAGCACTAGCAG+TGG - chr1_2:45229750-45229769 None:intergenic 45.0%
TCCTGAGACCACAGGTTATA+TGG + chr1_2:45229772-45229791 Msa0072370:CDS 45.0%
CCTGAGACCACAGGTTATAT+GGG + chr1_2:45229773-45229792 Msa0072370:CDS 45.0%
ATCTCCACCCATATAACCTG+TGG - chr1_2:45229783-45229802 None:intergenic 45.0%
GGCATGATGGTAAGCATTAC+AGG + chr1_2:45231153-45231172 Msa0072370:CDS 45.0%
TGTGAAGACACTTGAGGACA+AGG + chr1_2:45231493-45231512 Msa0072370:CDS 45.0%
GACACTTGAGGACAAGGAAA+AGG + chr1_2:45231499-45231518 Msa0072370:CDS 45.0%
TTGAGGACAAGGAAAAGGAG+AGG + chr1_2:45231504-45231523 Msa0072370:CDS 45.0%
TGAGGACAAGGAAAAGGAGA+GGG + chr1_2:45231505-45231524 Msa0072370:CDS 45.0%
CGTTAAGAGAAGAAGAGTGG+AGG + chr1_2:45231528-45231547 Msa0072370:CDS 45.0%
AGAAGAGTGGAGGAAACAAG+AGG + chr1_2:45231538-45231557 Msa0072370:CDS 45.0%
GAGGAAACAAGAGGCCAAAA+GGG + chr1_2:45231547-45231566 Msa0072370:CDS 45.0%
! AGAGAGCATGGATTGAAGCA+AGG + chr1_2:45231600-45231619 Msa0072370:CDS 45.0%
! GAGAGCATGGATTGAAGCAA+GGG + chr1_2:45231601-45231620 Msa0072370:CDS 45.0%
!! AGCAAGGGATGCTGCTTTAA+TGG + chr1_2:45231616-45231635 Msa0072370:CDS 45.0%
CCACCCTCACTAATCATGAA+AGG - chr1_2:45232010-45232029 None:intergenic 45.0%
CCTTTCATGATTAGTGAGGG+TGG + chr1_2:45232007-45232026 Msa0072370:CDS 45.0%
! CTAAAGAAGCATGAGGGGAA+AGG - chr1_2:45232498-45232517 None:intergenic 45.0%
! GCACACTAAAGAAGCATGAG+GGG - chr1_2:45232503-45232522 None:intergenic 45.0%
! CAGCACACTAAAGAAGCATG+AGG - chr1_2:45232505-45232524 None:intergenic 45.0%
! GTACTGTGCATGCAGGTTTT+TGG + chr1_2:45232538-45232557 Msa0072370:three_prime_UTR 45.0%
TTGTCAAAACTACGATGGCG+TGG + chr1_2:45232703-45232722 Msa0072370:three_prime_UTR 45.0%
CATCGTTTGATCACCCCAAA+TGG + chr1_2:45232845-45232864 Msa0072370:three_prime_UTR 45.0%
!! AAATAATTACATAAATAATT+AGG - chr1_2:45229961-45229980 None:intergenic 5.0%
GATCCTGTCGTGCAGGAAAA+AGG - chr1_2:45229273-45229292 None:intergenic 50.0%
GGAGAGAGTGAAGAAAGCAG+CGG - chr1_2:45229304-45229323 None:intergenic 50.0%
!! GTTGGTGATGGTGATGGTGA+GGG - chr1_2:45229445-45229464 None:intergenic 50.0%
!! TGTTGGTGATGGTGATGGTG+AGG - chr1_2:45229446-45229465 None:intergenic 50.0%
! GTTGTTGCTGCTGTTGGTGA+TGG - chr1_2:45229457-45229476 None:intergenic 50.0%
TAGCCGCTGTCGGTATAGAT+GGG - chr1_2:45229526-45229545 None:intergenic 50.0%
ATCTATACCGACAGCGGCTA+CGG + chr1_2:45229526-45229545 Msa0072370:CDS 50.0%
! GAGATGATGATGCTAGGTCG+TGG + chr1_2:45229647-45229666 Msa0072370:CDS 50.0%
AACACTAGCACTAGCAGTGG+TGG - chr1_2:45229747-45229766 None:intergenic 50.0%
GTTTCAACTCCTGAGACCAC+AGG + chr1_2:45229764-45229783 Msa0072370:CDS 50.0%
CCCATATAACCTGTGGTCTC+AGG - chr1_2:45229776-45229795 None:intergenic 50.0%
GAGACCACAGGTTATATGGG+TGG + chr1_2:45229776-45229795 Msa0072370:CDS 50.0%
GAGATGCATCCACTGGAAGA+TGG + chr1_2:45229798-45229817 Msa0072370:CDS 50.0%
TTGTCTTGGCCATCTTCCAG+TGG - chr1_2:45229810-45229829 None:intergenic 50.0%
GTGGAAAAACGAGACAGTGG+TGG - chr1_2:45230439-45230458 None:intergenic 50.0%
! GGTAAAGCAGGAAGGCATGA+TGG + chr1_2:45231140-45231159 Msa0072370:CDS 50.0%
GATACGTCGTCGTCTGATGA+TGG + chr1_2:45231347-45231366 Msa0072370:CDS 50.0%
GAAGCTTGTGGAGAAGCAAG+AGG + chr1_2:45231454-45231473 Msa0072370:CDS 50.0%
TTGTGGAGAAGCAAGAGGAG+TGG + chr1_2:45231459-45231478 Msa0072370:CDS 50.0%
GGGCGTTAAGAGAAGAAGAG+TGG + chr1_2:45231525-45231544 Msa0072370:CDS 50.0%
GGAGGAAACAAGAGGCCAAA+AGG + chr1_2:45231546-45231565 Msa0072370:CDS 50.0%
GAAACAAGAGGCCAAAAGGG+TGG + chr1_2:45231550-45231569 Msa0072370:CDS 50.0%
! GAGCCTTTTTCCTGCACGAC+AGG + chr1_2:45229267-45229286 Msa0072370:five_prime_UTR 55.0%
GAAGAAAGCAGCGGCAGAGT+CGG - chr1_2:45229295-45229314 None:intergenic 55.0%
!! GCTGCTGTTGGTGATGGTGA+TGG - chr1_2:45229451-45229470 None:intergenic 55.0%
GTAGCCGCTGTCGGTATAGA+TGG - chr1_2:45229527-45229546 None:intergenic 55.0%
AACTCATCCGTAGCCGCTGT+CGG - chr1_2:45229536-45229555 None:intergenic 55.0%
AGCTGTCAGATTCCGGTGAC+CGG - chr1_2:45229564-45229583 None:intergenic 55.0%
ATGGGTGGAGATGCATCCAC+TGG + chr1_2:45229791-45229810 Msa0072370:CDS 55.0%
AGAGTCGGATCCTGTCGTGC+AGG - chr1_2:45229280-45229299 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 45229142 45232978 45229142 ID=Msa0072370;Name=Msa0072370
chr1_2 mRNA 45229142 45232978 45229142 ID=Msa0072370-mRNA-1;Parent=Msa0072370;Name=Msa0072370-mRNA-1;_AED=0.00;_eAED=0.00;_QI=268|1|1|1|1|1|2|894|516
chr1_2 exon 45229142 45229921 45229142 ID=Msa0072370-mRNA-1:exon:13617;Parent=Msa0072370-mRNA-1
chr1_2 exon 45231046 45232978 45231046 ID=Msa0072370-mRNA-1:exon:13618;Parent=Msa0072370-mRNA-1
chr1_2 five_prime_UTR 45229142 45229409 45229142 ID=Msa0072370-mRNA-1:five_prime_utr;Parent=Msa0072370-mRNA-1
chr1_2 CDS 45229410 45229921 45229410 ID=Msa0072370-mRNA-1:cds;Parent=Msa0072370-mRNA-1
chr1_2 CDS 45231046 45232084 45231046 ID=Msa0072370-mRNA-1:cds;Parent=Msa0072370-mRNA-1
chr1_2 three_prime_UTR 45232085 45232978 45232085 ID=Msa0072370-mRNA-1:three_prime_utr;Parent=Msa0072370-mRNA-1
Gene Sequence

>Msa0072370

ATGGATGACCACCATAACAATCATGGTCATCACCCTCACCATCACCATCACCAACAGCAGCAACAACAATATGATCTAAGACAGCTAGTGAATGGAACAAGGTCAACCCATTTCCCATCTATACCGACAGCGGCTACGGATGAGTTTTTCTCCGGTCACCGGAATCTGACAGCTTTGTTAACTACTACTACTCATCCTAATCCACAGACACATCAAAACCAACAACAACAACAGTATGAGATGATGATGCTAGGTCGTGGAGTAGTTCTTGAAGATTTTAATAGCATCACTACTCATGTACCACCACCACCTTCAACAACAATAACAACAACAACCACCACTGCTAGTGCTAGTGTTTCAACTCCTGAGACCACAGGTTATATGGGTGGAGATGCATCCACTGGAAGATGGCCAAGACAAGAAACTCTTACTCTTCTTGAAATCAGATCTCGTCTTGACCCTAAATTTAAAGAAGCTAATCAAAAAGGTCCTTTATGGGATGAAGTCTCTAGGATAATGTCTGAAGAACATGGATATCAAAGGAGTGGAAAAAAGTGCAGAGAAAAATTTGAGAATCTGTACAAATATTACAAGAAGACAAAAGAAGGTAAAGCAGGAAGGCATGATGGTAAGCATTACAGGTTTTTTCGTCAACTTGAAGCTTTATATGGTGAAAACAGTAACCAAACTTCTCTACCAGAAACCAATTTTGTCAACAACAATAATTTCCATTTCCAACAAACAAGTAATAGCCAAAACCCTCACAATGATCATAGCCTTAGTCTCACTACTAACTCAACTGACTTTGAAATCGATACGTCGTCGTCTGATGATGGCAATGATGTGAAGGGAAAGAAGAAGAGTAGTGGAAGAAGAAGTTGGAAGGTGAAGATAAAAGACTTCATTGATGCACAAATGAAGAAGCTTGTGGAGAAGCAAGAGGAGTGGTTGAGTAAGCTTGTGAAGACACTTGAGGACAAGGAAAAGGAGAGGGCGTTAAGAGAAGAAGAGTGGAGGAAACAAGAGGCCAAAAGGGTGGAAAAAGAACAAAAGTTTTGGAGTAATGAGAGAGCATGGATTGAAGCAAGGGATGCTGCTTTAATGGAAGCTTTGAAGAATTTAGGAGGTAGAGAAATGATTAAGGTTGAAGAGGCTCATGATCATAAGGGTGTAAATGTAATAACTGGAGCAGAGATTCAAAATCAAAATGAAGATGGGAGTGAAATCTTGAATAGTACTGTGAGAGGTTCTGATAATTGTACTCCAAGGGATGATTCTAAAGAAGGAAATAGGAAGAGAAAGGAGAGTTTTTACTTCAACAATAATGAACAATGCTCTATGTACAATCAAGGAAGTGGTTATTGTGATGTTAATGATCAAAGAGATGAGATTGTGAAACTACAAAGGAATGATCATGGTTCTTCACCTTCTGATTCTAATGTTGGAAATGTTGCTAATGGTGATACTTGCTTTCCTTTCATGATTAGTGAGGGTGGAAATTTGTGGGAGAATTTTGGCTTGAAGATCAATAAAGTAAACCAAAACCATTAA
Protein sequence

>Msa0072370

MDDHHNNHGHHPHHHHHQQQQQQYDLRQLVNGTRSTHFPSIPTAATDEFFSGHRNLTALLTTTTHPNPQTHQNQQQQQYEMMMLGRGVVLEDFNSITTHVPPPPSTTITTTTTTASASVSTPETTGYMGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRHDGKHYRFFRQLEALYGENSNQTSLPETNFVNNNNFHFQQTSNSQNPHNDHSLSLTTNSTDFEIDTSSSDDGNDVKGKKKSSGRRSWKVKIKDFIDAQMKKLVEKQEEWLSKLVKTLEDKEKERALREEEWRKQEAKRVEKEQKFWSNERAWIEARDAALMEALKNLGGREMIKVEEAHDHKGVNVITGAEIQNQNEDGSEILNSTVRGSDNCTPRDDSKEGNRKRKESFYFNNNEQCSMYNQGSGYCDVNDQRDEIVKLQRNDHGSSPSDSNVGNVANGDTCFPFMISEGGNLWENFGLKINKVNQNH*