Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837440 | XP_003611976.1 | 95.957 | 470 | 13 | 1 | 1 | 464 | 1 | 470 | 0.0 | 903 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837440 | sp|Q8L7A0|TAUE3_ARATH | 62.179 | 468 | 161 | 5 | 10 | 462 | 6 | 472 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837440 | G7ZW19 | 95.957 | 470 | 13 | 1 | 1 | 464 | 1 | 470 | 0.0 | 903 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa0837440 | 0.806338 | 8.637059e-50 | -8.615850e-47 |
| Msa0017510 | Msa0837440 | 0.801093 | 1.059467e-48 | -8.615850e-47 |
| Msa0027540 | Msa0837440 | 0.800684 | 1.284325e-48 | -8.615850e-47 |
| Msa0036430 | Msa0837440 | 0.816018 | 6.865299e-52 | -8.615850e-47 |
| Msa0044020 | Msa0837440 | 0.811923 | 5.491278e-51 | -8.615850e-47 |
| Msa0044100 | Msa0837440 | 0.834442 | 2.990897e-56 | -8.615850e-47 |
| Msa0046750 | Msa0837440 | 0.810834 | 9.465625e-51 | -8.615850e-47 |
| Msa0072370 | Msa0837440 | 0.838358 | 3.014714e-57 | -8.615850e-47 |
| Msa0075310 | Msa0837440 | 0.813657 | 2.291096e-51 | -8.615850e-47 |
| Msa0095540 | Msa0837440 | 0.815014 | 1.148606e-51 | -8.615850e-47 |
| Msa0096000 | Msa0837440 | 0.829685 | 4.483862e-55 | -8.615850e-47 |
| Msa0098440 | Msa0837440 | 0.819686 | 1.019659e-52 | -8.615850e-47 |
| Msa0105420 | Msa0837440 | 0.828631 | 8.073001e-55 | -8.615850e-47 |
| Msa0120330 | Msa0837440 | 0.808567 | 2.906905e-50 | -8.615850e-47 |
| Msa0611380 | Msa0837440 | 0.849501 | 3.104647e-60 | -8.615850e-47 |
| Msa0618180 | Msa0837440 | 0.821770 | 3.383613e-53 | -8.615850e-47 |
| Msa0618220 | Msa0837440 | 0.814638 | 1.391095e-51 | -8.615850e-47 |
| Msa0619330 | Msa0837440 | 0.809246 | 2.080775e-50 | -8.615850e-47 |
| Msa0619990 | Msa0837440 | 0.841668 | 4.133158e-58 | -8.615850e-47 |
| Msa0621890 | Msa0837440 | 0.831897 | 1.286537e-55 | -8.615850e-47 |
| Msa0628640 | Msa0837440 | 0.877853 | 4.501683e-69 | -8.615850e-47 |
| Msa0631120 | Msa0837440 | 0.901218 | 3.344644e-78 | -8.615850e-47 |
| Msa0666030 | Msa0837440 | 0.865105 | 7.516808e-65 | -8.615850e-47 |
| Msa0669340 | Msa0837440 | 0.895880 | 6.290144e-76 | -8.615850e-47 |
| Msa0684500 | Msa0837440 | 0.834773 | 2.468326e-56 | -8.615850e-47 |
| Msa0701770 | Msa0837440 | 0.804871 | 1.754126e-49 | -8.615850e-47 |
| Msa0701970 | Msa0837440 | 0.837510 | 4.981707e-57 | -8.615850e-47 |
| Msa0706370 | Msa0837440 | 0.800600 | 1.335715e-48 | -8.615850e-47 |
| Msa0706420 | Msa0837440 | 0.817470 | 3.243122e-52 | -8.615850e-47 |
| Msa0709500 | Msa0837440 | 0.806289 | 8.843666e-50 | -8.615850e-47 |
| Msa0716450 | Msa0837440 | 0.932657 | 6.125123e-95 | -8.615850e-47 |
| Msa0717260 | Msa0837440 | 0.909392 | 5.992552e-82 | -8.615850e-47 |
| Msa0734230 | Msa0837440 | 0.850795 | 1.347337e-60 | -8.615850e-47 |
| Msa0741900 | Msa0837440 | 0.817693 | 2.889080e-52 | -8.615850e-47 |
| Msa0743200 | Msa0837440 | 0.802051 | 6.738420e-49 | -8.615850e-47 |
| Msa0754370 | Msa0837440 | 0.812983 | 3.221518e-51 | -8.615850e-47 |
| Msa0754720 | Msa0837440 | -0.808986 | 2.365175e-50 | -8.615850e-47 |
| Msa0756630 | Msa0837440 | -0.803487 | 3.405643e-49 | -8.615850e-47 |
| Msa0758320 | Msa0837440 | 0.890191 | 1.231028e-73 | -8.615850e-47 |
| Msa0766100 | Msa0837440 | -0.813613 | 2.341933e-51 | -8.615850e-47 |
| Msa0775440 | Msa0837440 | 0.894937 | 1.540951e-75 | -8.615850e-47 |
| Msa0787260 | Msa0837440 | 0.839893 | 1.206270e-57 | -8.615850e-47 |
| Msa0790850 | Msa0837440 | 0.804016 | 2.644906e-49 | -8.615850e-47 |
| Msa0795690 | Msa0837440 | 0.817481 | 3.224657e-52 | -8.615850e-47 |
| Msa0799030 | Msa0837440 | 0.930182 | 2.376452e-93 | -8.615850e-47 |
| Msa0799700 | Msa0837440 | 0.831112 | 2.008119e-55 | -8.615850e-47 |
| Msa0810020 | Msa0837440 | 0.837196 | 5.996326e-57 | -8.615850e-47 |
| Msa0812820 | Msa0837440 | 0.872326 | 3.464755e-67 | -8.615850e-47 |
| Msa0822990 | Msa0837440 | 0.830627 | 2.639981e-55 | -8.615850e-47 |
| Msa0837440 | Msa0837980 | 0.894118 | 3.331042e-75 | -8.615850e-47 |
| Msa0837440 | Msa0853320 | 0.880530 | 5.087256e-70 | -8.615850e-47 |
| Msa0837440 | Msa0862100 | 0.826537 | 2.569161e-54 | -8.615850e-47 |
| Msa0837440 | Msa0872310 | 0.811724 | 6.067266e-51 | -8.615850e-47 |
| Msa0837440 | Msa0878400 | 0.812361 | 4.407926e-51 | -8.615850e-47 |
| Msa0837440 | Msa0880140 | 0.803036 | 4.221839e-49 | -8.615850e-47 |
| Msa0837440 | Msa0880710 | 0.815887 | 7.342513e-52 | -8.615850e-47 |
| Msa0837440 | Msa0885060 | 0.807607 | 4.655050e-50 | -8.615850e-47 |
| Msa0837440 | Msa0905550 | 0.818796 | 1.625773e-52 | -8.615850e-47 |
| Msa0837440 | Msa0936270 | 0.803889 | 2.810866e-49 | -8.615850e-47 |
| Msa0837440 | Msa0937550 | 0.811600 | 6.457325e-51 | -8.615850e-47 |
| Msa0837440 | Msa0944770 | 0.808926 | 2.435863e-50 | -8.615850e-47 |
| Msa0837440 | Msa0951710 | 0.809775 | 1.601914e-50 | -8.615850e-47 |
| Msa0837440 | Msa0966420 | 0.804468 | 2.129176e-49 | -8.615850e-47 |
| Msa0837440 | Msa0981010 | 0.852956 | 3.283850e-61 | -8.615850e-47 |
| Msa0837440 | Msa1002620 | 0.933536 | 1.615145e-95 | -8.615850e-47 |
| Msa0837440 | Msa1007610 | -0.822693 | 2.066746e-53 | -8.615850e-47 |
| Msa0837440 | Msa1009000 | 0.806490 | 8.019836e-50 | -8.615850e-47 |
| Msa0837440 | Msa1010110 | 0.803932 | 2.752692e-49 | -8.615850e-47 |
| Msa0837440 | Msa1033560 | 0.850440 | 1.695381e-60 | -8.615850e-47 |
| Msa0837440 | Msa1040830 | 0.803883 | 2.818010e-49 | -8.615850e-47 |
| Msa0837440 | Msa1055280 | 0.813791 | 2.140902e-51 | -8.615850e-47 |
| Msa0837440 | Msa1069100 | 0.803377 | 3.589523e-49 | -8.615850e-47 |
| Msa0837440 | Msa1073340 | 0.815996 | 6.943064e-52 | -8.615850e-47 |
| Msa0837440 | Msa1073350 | 0.827010 | 1.980744e-54 | -8.615850e-47 |
| Msa0837440 | Msa1083150 | 0.821833 | 3.271615e-53 | -8.615850e-47 |
| Msa0837440 | Msa1087810 | 0.803545 | 3.312132e-49 | -8.615850e-47 |
| Msa0837440 | Msa1098560 | 0.817762 | 2.786966e-52 | -8.615850e-47 |
| Msa0837440 | Msa1113850 | 0.858375 | 8.601364e-63 | -8.615850e-47 |
| Msa0837440 | Msa1125760 | 0.820066 | 8.345013e-53 | -8.615850e-47 |
| Msa0837440 | Msa1139810 | 0.806587 | 7.650535e-50 | -8.615850e-47 |
| Msa0837440 | Msa1160400 | 0.835953 | 1.242764e-56 | -8.615850e-47 |
| Msa0837440 | Msa1171360 | 0.807228 | 5.598889e-50 | -8.615850e-47 |
| Msa0837440 | Msa1172590 | 0.824545 | 7.617815e-54 | -8.615850e-47 |
| Msa0837440 | Msa1172670 | 0.807837 | 4.158037e-50 | -8.615850e-47 |
| Msa0837440 | Msa1179460 | 0.804403 | 2.196580e-49 | -8.615850e-47 |
| Msa0837440 | Msa1190120 | 0.835818 | 1.344408e-56 | -8.615850e-47 |
| Msa0837440 | Msa1197590 | 0.827466 | 1.540611e-54 | -8.615850e-47 |
| Msa0837440 | Msa1203000 | 0.872855 | 2.306639e-67 | -8.615850e-47 |
| Msa0837440 | Msa1204120 | 0.835365 | 1.750690e-56 | -8.615850e-47 |
| Msa0837440 | Msa1211550 | 0.831692 | 1.445621e-55 | -8.615850e-47 |
| Msa0837440 | Msa1217860 | 0.807449 | 5.027401e-50 | -8.615850e-47 |
| Msa0837440 | Msa1217940 | 0.857426 | 1.646159e-62 | -8.615850e-47 |
| Msa0837440 | Msa1218480 | 0.825530 | 4.458655e-54 | -8.615850e-47 |
| Msa0837440 | Msa1219260 | 0.872737 | 2.526517e-67 | -8.615850e-47 |
| Msa0837440 | Msa1220230 | 0.824594 | 7.415543e-54 | -8.615850e-47 |
| Msa0837440 | Msa1227950 | 0.858572 | 7.514254e-63 | -8.615850e-47 |
| Msa0837440 | Msa1227970 | 0.859894 | 3.016021e-63 | -8.615850e-47 |
| Msa0837440 | Msa1240310 | 0.801374 | 9.281904e-49 | -8.615850e-47 |
| Msa0837440 | Msa1254700 | 0.815786 | 7.732557e-52 | -8.615850e-47 |
| Msa0837440 | Msa1255280 | 0.862921 | 3.596628e-64 | -8.615850e-47 |
| Msa0837440 | Msa1258050 | 0.840088 | 1.073483e-57 | -8.615850e-47 |
| Msa0837440 | Msa1260040 | 0.805388 | 1.367175e-49 | -8.615850e-47 |
| Msa0837440 | Msa1265960 | 0.821085 | 4.870424e-53 | -8.615850e-47 |
| Msa0837440 | Msa1266960 | 0.868996 | 4.308572e-66 | -8.615850e-47 |
| Msa0837440 | Msa1269580 | -0.804807 | 1.809086e-49 | -8.615850e-47 |
| Msa0837440 | Msa1291870 | 0.846933 | 1.590819e-59 | -8.615850e-47 |
| Msa0837440 | Msa1291960 | 0.811785 | 5.885831e-51 | -8.615850e-47 |
| Msa0837440 | Msa1308130 | 0.809652 | 1.701822e-50 | -8.615850e-47 |
| Msa0837440 | Msa1321000 | 0.802782 | 4.764136e-49 | -8.615850e-47 |
| Msa0837440 | Msa1329920 | 0.844087 | 9.395291e-59 | -8.615850e-47 |
| Msa0837440 | Msa1331910 | 0.800865 | 1.179530e-48 | -8.615850e-47 |
| Msa0837440 | Msa1331920 | 0.807722 | 4.399368e-50 | -8.615850e-47 |
| Msa0837440 | Msa1339940 | 0.839752 | 1.312888e-57 | -8.615850e-47 |
| Msa0837440 | Msa1342430 | 0.800725 | 1.259317e-48 | -8.615850e-47 |
| Msa0837440 | Msa1343820 | 0.821691 | 3.528892e-53 | -8.615850e-47 |
| Msa0837440 | Msa1363890 | 0.800898 | 1.161298e-48 | -8.615850e-47 |
| Msa0837440 | Msa1369700 | 0.854605 | 1.101441e-61 | -8.615850e-47 |
| Msa0837440 | Msa1379990 | 0.804302 | 2.305666e-49 | -8.615850e-47 |
| Msa0837440 | Msa1390310 | 0.827141 | 1.843391e-54 | -8.615850e-47 |
| Msa0837440 | Msa1395870 | 0.870530 | 1.361031e-66 | -8.615850e-47 |
| Msa0837440 | Msa1397250 | 0.825208 | 5.311840e-54 | -8.615850e-47 |
| Msa0837440 | Msa1399560 | 0.868424 | 6.597620e-66 | -8.615850e-47 |
| Msa0837440 | Msa1401150 | 0.823472 | 1.359994e-53 | -8.615850e-47 |
| Msa0837440 | Msa1403970 | 0.806989 | 6.293222e-50 | -8.615850e-47 |
| Msa0837440 | Msa1405180 | 0.823725 | 1.186706e-53 | -8.615850e-47 |
| Msa0837440 | Msa1420060 | 0.807622 | 4.620274e-50 | -8.615850e-47 |
| Msa0837440 | Msa1423450 | 0.812525 | 4.057910e-51 | -8.615850e-47 |
| Msa0837440 | Msa1425010 | 0.812678 | 3.757218e-51 | -8.615850e-47 |
| Msa0837440 | Msa1431000 | 0.827137 | 1.847417e-54 | -8.615850e-47 |
| Msa0837440 | Msa1437190 | 0.840827 | 6.878767e-58 | -8.615850e-47 |
| Msa0837440 | Msa1439960 | 0.801491 | 8.782982e-49 | -8.615850e-47 |
| Msa0837440 | Msa1440340 | 0.819642 | 1.043294e-52 | -8.615850e-47 |
| Msa0837440 | Msa1443840 | 0.855301 | 6.915947e-62 | -8.615850e-47 |
| Msa0837440 | Msa1449730 | 0.815178 | 1.055931e-51 | -8.615850e-47 |
| Msa0837440 | Msa1452060 | 0.837415 | 5.269457e-57 | -8.615850e-47 |
| Msa0837440 | Msa1460380 | 0.866000 | 3.925116e-65 | -8.615850e-47 |
| Msa0141100 | Msa0837440 | 0.881431 | 2.415169e-70 | -8.615850e-47 |
| Msa0145670 | Msa0837440 | 0.805863 | 1.087187e-49 | -8.615850e-47 |
| Msa0148340 | Msa0837440 | 0.820363 | 7.137244e-53 | -8.615850e-47 |
| Msa0153420 | Msa0837440 | 0.823834 | 1.118592e-53 | -8.615850e-47 |
| Msa0157290 | Msa0837440 | 0.800486 | 1.408785e-48 | -8.615850e-47 |
| Msa0168100 | Msa0837440 | 0.802811 | 4.699363e-49 | -8.615850e-47 |
| Msa0172350 | Msa0837440 | 0.833533 | 5.048609e-56 | -8.615850e-47 |
| Msa0183750 | Msa0837440 | 0.856199 | 3.780830e-62 | -8.615850e-47 |
| Msa0185480 | Msa0837440 | 0.807275 | 5.473430e-50 | -8.615850e-47 |
| Msa0191040 | Msa0837440 | 0.865364 | 6.231389e-65 | -8.615850e-47 |
| Msa0197930 | Msa0837440 | 0.810510 | 1.111841e-50 | -8.615850e-47 |
| Msa0203640 | Msa0837440 | 0.810242 | 1.270462e-50 | -8.615850e-47 |
| Msa0208520 | Msa0837440 | 0.822410 | 2.403942e-53 | -8.615850e-47 |
| Msa0220300 | Msa0837440 | 0.841184 | 5.543744e-58 | -8.615850e-47 |
| Msa0225600 | Msa0837440 | 0.821129 | 4.757892e-53 | -8.615850e-47 |
| Msa0233340 | Msa0837440 | 0.865392 | 6.105960e-65 | -8.615850e-47 |
| Msa0236440 | Msa0837440 | 0.809085 | 2.252394e-50 | -8.615850e-47 |
| Msa0374850 | Msa0837440 | 0.883450 | 4.440293e-71 | -8.615850e-47 |
| Msa0375090 | Msa0837440 | 0.890377 | 1.041090e-73 | -8.615850e-47 |
| Msa0418000 | Msa0837440 | 0.810060 | 1.390399e-50 | -8.615850e-47 |
| Msa0419820 | Msa0837440 | 0.818678 | 1.729686e-52 | -8.615850e-47 |
| Msa0423360 | Msa0837440 | -0.829718 | 4.400186e-55 | -8.615850e-47 |
| Msa0436460 | Msa0837440 | 0.807995 | 3.849928e-50 | -8.615850e-47 |
| Msa0470340 | Msa0837440 | 0.883698 | 3.598269e-71 | -8.615850e-47 |
| Msa0470860 | Msa0837440 | 0.845265 | 4.522474e-59 | -8.615850e-47 |
| Msa0480950 | Msa0837440 | 0.842091 | 3.194688e-58 | -8.615850e-47 |
| Msa0481110 | Msa0837440 | 0.851357 | 9.352616e-61 | -8.615850e-47 |
| Msa0251240 | Msa0837440 | 0.841872 | 3.651222e-58 | -8.615850e-47 |
| Msa0266450 | Msa0837440 | 0.825284 | 5.097247e-54 | -8.615850e-47 |
| Msa0267760 | Msa0837440 | 0.832081 | 1.158858e-55 | -8.615850e-47 |
| Msa0311690 | Msa0837440 | 0.852050 | 5.952288e-61 | -8.615850e-47 |
| Msa0315250 | Msa0837440 | 0.830943 | 2.208601e-55 | -8.615850e-47 |
| Msa0316850 | Msa0837440 | 0.803741 | 3.015845e-49 | -8.615850e-47 |
| Msa0326540 | Msa0837440 | 0.805254 | 1.458477e-49 | -8.615850e-47 |
| Msa0505360 | Msa0837440 | 0.801034 | 1.089187e-48 | -8.615850e-47 |
| Msa0508610 | Msa0837440 | 0.807273 | 5.478182e-50 | -8.615850e-47 |
| Msa0508650 | Msa0837440 | 0.809987 | 1.442065e-50 | -8.615850e-47 |
| Msa0520510 | Msa0837440 | 0.806397 | 8.391347e-50 | -8.615850e-47 |
| Msa0524120 | Msa0837440 | 0.810886 | 9.221186e-51 | -8.615850e-47 |
| Msa0526710 | Msa0837440 | 0.824324 | 8.584889e-54 | -8.615850e-47 |
| Msa0531430 | Msa0837440 | 0.888078 | 8.121104e-73 | -8.615850e-47 |
| Msa0534570 | Msa0837440 | 0.861838 | 7.745218e-64 | -8.615850e-47 |
| Msa0534590 | Msa0837440 | 0.891346 | 4.321213e-74 | -8.615850e-47 |
| Msa0565600 | Msa0837440 | 0.842120 | 3.138934e-58 | -8.615850e-47 |
| Msa0590800 | Msa0837440 | 0.877533 | 5.823946e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837440 | MtrunA17_Chr5g0403901 | 95.957 | 470 | 13 | 1 | 1 | 464 | 1 | 470 | 0.0 | 903 |
| Msa0837440 | MtrunA17_Chr8g0373471 | 72.669 | 472 | 109 | 4 | 1 | 464 | 8 | 467 | 0.0 | 630 |
| Msa0837440 | MtrunA17_Chr3g0139541 | 63.755 | 458 | 157 | 5 | 12 | 462 | 11 | 466 | 0.0 | 552 |
| Msa0837440 | MtrunA17_Chr8g0380211 | 60.455 | 440 | 155 | 4 | 34 | 463 | 46 | 476 | 5.19e-153 | 443 |
| Msa0837440 | MtrunA17_Chr1g0157751 | 50.000 | 462 | 207 | 5 | 11 | 462 | 8 | 455 | 3.51e-143 | 417 |
| Msa0837440 | MtrunA17_Chr7g0265481 | 52.542 | 413 | 182 | 4 | 64 | 464 | 51 | 461 | 5.15e-127 | 376 |
| Msa0837440 | MtrunA17_Chr8g0380191 | 57.941 | 340 | 108 | 2 | 123 | 462 | 10 | 314 | 4.82e-122 | 358 |
| Msa0837440 | MtrunA17_Chr1g0179621 | 50.602 | 415 | 193 | 2 | 61 | 463 | 49 | 463 | 1.18e-121 | 363 |
| Msa0837440 | MtrunA17_Chr2g0280401 | 28.351 | 388 | 244 | 9 | 101 | 462 | 87 | 466 | 1.10e-39 | 149 |
| Msa0837440 | MtrunA17_Chr3g0139621 | 47.458 | 118 | 40 | 1 | 297 | 392 | 27 | 144 | 3.54e-20 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837440 | AT2G25737.1 | 62.179 | 468 | 161 | 5 | 10 | 462 | 6 | 472 | 0.0 | 543 |
| Msa0837440 | AT2G25737.2 | 57.766 | 367 | 139 | 5 | 10 | 361 | 6 | 371 | 2.02e-132 | 387 |
| Msa0837440 | AT2G36630.1 | 50.835 | 419 | 192 | 3 | 58 | 464 | 42 | 458 | 3.61e-125 | 372 |
| Msa0837440 | AT1G11540.2 | 33.911 | 404 | 240 | 6 | 77 | 462 | 56 | 450 | 6.74e-49 | 174 |
| Msa0837440 | AT1G11540.1 | 33.511 | 376 | 223 | 6 | 105 | 462 | 1 | 367 | 1.53e-48 | 171 |
| Msa0837440 | AT4G21250.1 | 30.788 | 419 | 245 | 7 | 69 | 462 | 51 | 449 | 3.28e-42 | 155 |
| Msa0837440 | AT1G61740.1 | 29.087 | 416 | 266 | 8 | 68 | 462 | 51 | 458 | 3.41e-42 | 155 |
| Msa0837440 | AT4G21260.1 | 26.222 | 450 | 266 | 9 | 13 | 462 | 10 | 393 | 5.99e-34 | 132 |
Find 125 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTTGCTTGAATGAAAA+TGG | 0.143442 | 5_4:-11420944 | None:intergenic |
| AAGCAATGGTTGATTTCTTA+TGG | 0.158207 | 5_4:+11417094 | Msa0837440:CDS |
| TCTAGGAGGTGGCTTCATTT+TGG | 0.160113 | 5_4:+11419496 | Msa0837440:CDS |
| TATCACTTCTTGTCTATGTT+TGG | 0.210505 | 5_4:+11418851 | Msa0837440:CDS |
| CTTTGCTAAAGAACATTTAT+TGG | 0.212510 | 5_4:+11418821 | Msa0837440:CDS |
| GATAATTGCAGGTATGATTA+TGG | 0.245947 | 5_4:+11417586 | Msa0837440:intron |
| CCTATGCTTGCTTTGATCAT+TGG | 0.246443 | 5_4:+11417368 | Msa0837440:CDS |
| GTTGGAAAATCATGAGTATA+TGG | 0.251481 | 5_4:+11420817 | Msa0837440:CDS |
| GCAAAATATAAAATAAATTA+AGG | 0.262013 | 5_4:-11420992 | None:intergenic |
| ATCACTTCTTGTCTATGTTT+GGG | 0.273401 | 5_4:+11418852 | Msa0837440:CDS |
| TGGATTCTTGGGAGCAGCTT+TGG | 0.295899 | 5_4:+11417307 | Msa0837440:CDS |
| AGGCATAAATACATGGAAAA+AGG | 0.303982 | 5_4:+11418215 | Msa0837440:CDS |
| ACACATGGCAACAAAATCTT+TGG | 0.304038 | 5_4:+11416945 | Msa0837440:exon |
| AACGATCTAAATAGTAATAT+TGG | 0.306065 | 5_4:-11420225 | None:intergenic |
| GGGATCAATCGTTGGATTCT+TGG | 0.308886 | 5_4:+11417295 | Msa0837440:CDS |
| GGGGCCACTGTTTCTAGAAA+TGG | 0.317544 | 5_4:+11419517 | Msa0837440:CDS |
| TTGGATTCTTAATTTCTTGC+AGG | 0.323072 | 5_4:+11419216 | Msa0837440:CDS |
| AAAGGAAACAATGTTGAAAA+AGG | 0.328619 | 5_4:+11418233 | Msa0837440:CDS |
| TGCAGCTTCATACTTTGTTT+TGG | 0.337370 | 5_4:+11420531 | Msa0837440:intron |
| TTACTCATCATCTTATTCAT+AGG | 0.345297 | 5_4:+11417776 | Msa0837440:CDS |
| AGAGAACATGATTGTGAAGT+TGG | 0.357557 | 5_4:+11420799 | Msa0837440:CDS |
| TTCATAAGTGCAATCAGTTT+AGG | 0.367029 | 5_4:+11420655 | Msa0837440:CDS |
| GCCACTTATAGATTACGATT+TGG | 0.372828 | 5_4:+11417667 | Msa0837440:CDS |
| AGCAGGAAATGAAATTTGAT+TGG | 0.373699 | 5_4:+11417261 | Msa0837440:intron |
| ATTTGATTGGAAAATTATAG+TGG | 0.373846 | 5_4:+11417274 | Msa0837440:CDS |
| GGATTCTTGGGAGCAGCTTT+GGG | 0.374949 | 5_4:+11417308 | Msa0837440:CDS |
| GTTGGAGGGTTGCTTGGTCT+AGG | 0.378397 | 5_4:+11419479 | Msa0837440:CDS |
| GCAACCATAGCTGCATTTGC+TGG | 0.378940 | 5_4:+11420556 | Msa0837440:CDS |
| GGTATGGTTGGAGGGTTGCT+TGG | 0.380908 | 5_4:+11419473 | Msa0837440:CDS |
| GGATCAATCGTTGGATTCTT+GGG | 0.390311 | 5_4:+11417296 | Msa0837440:CDS |
| AGCAATGGTTGATTTCTTAT+GGG | 0.392688 | 5_4:+11417095 | Msa0837440:CDS |
| TGTATTTCACCTGGACCCTT+TGG | 0.393240 | 5_4:-11418690 | None:intergenic |
| CAACTGTTTACTACAATATG+AGG | 0.399306 | 5_4:+11417621 | Msa0837440:CDS |
| TTGGGAAGTGTTGGAGGTGT+AGG | 0.403654 | 5_4:+11417326 | Msa0837440:CDS |
| TGTTTCTCAACAAACTTTGC+CGG | 0.406213 | 5_4:-11417054 | None:intergenic |
| GGGCCACTGTTTCTAGAAAT+GGG | 0.411280 | 5_4:+11419518 | Msa0837440:CDS |
| ATAATTGCAGGTATGATTAT+GGG | 0.421533 | 5_4:+11417587 | Msa0837440:intron |
| TGGTTCTTCTTCCAACTGCT+TGG | 0.423091 | 5_4:-11418349 | None:intergenic |
| ATGTGGAGTAATGGCTGGTA+TGG | 0.429546 | 5_4:+11419457 | Msa0837440:CDS |
| AGACTTGCTCCATTGAGTAT+TGG | 0.430494 | 5_4:+11419197 | Msa0837440:CDS |
| TCTAATTGTTCAGATTGTTA+AGG | 0.430792 | 5_4:+11418882 | Msa0837440:CDS |
| GTTGATTTCTTATGGGAAAG+TGG | 0.432092 | 5_4:+11417102 | Msa0837440:CDS |
| AGTCTTCTTATGAACCTGTT+TGG | 0.432143 | 5_4:+11417127 | Msa0837440:CDS |
| GGAGCAGCTTTGGGAAGTGT+TGG | 0.432259 | 5_4:+11417317 | Msa0837440:CDS |
| TTCCAGCCTATGCTGATGCT+TGG | 0.432303 | 5_4:+11417698 | Msa0837440:CDS |
| GTAATGTCATGTTTGCTGAT+TGG | 0.440823 | 5_4:+11417741 | Msa0837440:CDS |
| ACTGTAACAGAGATAGCAAT+AGG | 0.442311 | 5_4:-11419335 | None:intergenic |
| TTCACCTGGACCCTTTGGTA+GGG | 0.442360 | 5_4:-11418685 | None:intergenic |
| TTGGAAAATCATGAGTATAT+GGG | 0.442966 | 5_4:+11420818 | Msa0837440:CDS |
| AACACACTTACACTTGGAAA+TGG | 0.443708 | 5_4:-11417414 | None:intergenic |
| GTAATGGCTGGTATGGTTGG+AGG | 0.443896 | 5_4:+11419464 | Msa0837440:CDS |
| GATCGTTTCCCCGTACCTTA+CGG | 0.444344 | 5_4:+11420241 | Msa0837440:CDS |
| GGGTTGCTTGGTCTAGGAGG+TGG | 0.445245 | 5_4:+11419485 | Msa0837440:CDS |
| ATATTGCTATATTGTTTATG+TGG | 0.446750 | 5_4:+11419440 | Msa0837440:CDS |
| TAAGTGGCATGTCTAGTGTT+GGG | 0.453765 | 5_4:-11417652 | None:intergenic |
| GGAAGTGTTGGAGGTGTAGG+AGG | 0.462071 | 5_4:+11417329 | Msa0837440:CDS |
| TTTCACCTGGACCCTTTGGT+AGG | 0.464163 | 5_4:-11418686 | None:intergenic |
| GTTGGAGGTGTAGGAGGTGG+TGG | 0.466176 | 5_4:+11417335 | Msa0837440:CDS |
| TATGAACTCACAGGCCAAAC+AGG | 0.469346 | 5_4:-11417141 | None:intergenic |
| GGAGTAATGGCTGGTATGGT+TGG | 0.469457 | 5_4:+11419461 | Msa0837440:CDS |
| TCACCTGGACCCTTTGGTAG+GGG | 0.471023 | 5_4:-11418684 | None:intergenic |
| AACTACTTACCGTAAGGTAC+GGG | 0.471948 | 5_4:-11420250 | None:intergenic |
| AACAAGAGTGATTAAATCAA+AGG | 0.473487 | 5_4:+11419385 | Msa0837440:CDS |
| TGCTTGAATGAAAATGGAAT+AGG | 0.480466 | 5_4:-11420938 | None:intergenic |
| TAATGGCTGGTATGGTTGGA+GGG | 0.480577 | 5_4:+11419465 | Msa0837440:CDS |
| GCAGCTTTGGGAAGTGTTGG+AGG | 0.480835 | 5_4:+11417320 | Msa0837440:CDS |
| ATTATAGTGGGATCAATCGT+TGG | 0.490378 | 5_4:+11417287 | Msa0837440:CDS |
| TCTTTGCACTCAATAAGCTT+AGG | 0.491284 | 5_4:+11420850 | Msa0837440:exon |
| AGTGTTGGAGGTGTAGGAGG+TGG | 0.493934 | 5_4:+11417332 | Msa0837440:CDS |
| GGAAATGGCTGTAGAAGACT+TGG | 0.494754 | 5_4:-11417399 | None:intergenic |
| GAAACTAGGGATGGAAATCT+AGG | 0.499716 | 5_4:-11416913 | None:intergenic |
| GCCAAATCGTAATCTATAAG+TGG | 0.499758 | 5_4:-11417668 | None:intergenic |
| ATTAAGAATCCAATACTCAA+TGG | 0.501230 | 5_4:-11419206 | None:intergenic |
| ACAAGAGTGATTAAATCAAA+GGG | 0.507110 | 5_4:+11419386 | Msa0837440:CDS |
| CAATAAATGTTCTTTAGCAA+AGG | 0.508448 | 5_4:-11418820 | None:intergenic |
| AACAATCTGAACAATTAGAA+AGG | 0.520405 | 5_4:-11418878 | None:intergenic |
| TTCCAAGCATCAGCATAGGC+TGG | 0.520792 | 5_4:-11417700 | None:intergenic |
| CTGATGCTTGGAATAAGTAT+TGG | 0.521464 | 5_4:+11417710 | Msa0837440:CDS |
| AGAAGGATAATTGCAATCCT+TGG | 0.524746 | 5_4:+11420592 | Msa0837440:CDS |
| TTGTGTATCACAGGTGGAGT+AGG | 0.524929 | 5_4:+11420773 | Msa0837440:intron |
| ACTTCTTGTCTATGTTTGGG+TGG | 0.527940 | 5_4:+11418855 | Msa0837440:CDS |
| ACTGATTGCACTTATGAAGA+TGG | 0.531468 | 5_4:-11420650 | None:intergenic |
| CTGGCCAGCAAATGCAGCTA+TGG | 0.531946 | 5_4:-11420560 | None:intergenic |
| ATAAGTGGCATGTCTAGTGT+TGG | 0.532797 | 5_4:-11417653 | None:intergenic |
| TTTGATTGGAAAATTATAGT+GGG | 0.535494 | 5_4:+11417275 | Msa0837440:CDS |
| ACTTCATCTTGTATTTCACC+TGG | 0.537361 | 5_4:-11418699 | None:intergenic |
| AAACTACTTACCGTAAGGTA+CGG | 0.538127 | 5_4:-11420251 | None:intergenic |
| GGAGGGTTGCTTGGTCTAGG+AGG | 0.540261 | 5_4:+11419482 | Msa0837440:CDS |
| ATATTGTTTATGTGGAGTAA+TGG | 0.540286 | 5_4:+11419448 | Msa0837440:CDS |
| GACTACAAGCCCCTACCAAA+GGG | 0.543521 | 5_4:+11418675 | Msa0837440:CDS |
| GCAGGAAGCAGCCAAGCAGT+TGG | 0.548673 | 5_4:+11418338 | Msa0837440:intron |
| TGCATTTGCTGGCCAGCATG+TGG | 0.549794 | 5_4:+11420567 | Msa0837440:CDS |
| GAAAGGATTTCTAAAAGCAA+TGG | 0.554293 | 5_4:+11417080 | Msa0837440:CDS |
| TATTCAAAGGCATAAATACA+TGG | 0.555159 | 5_4:+11418208 | Msa0837440:CDS |
| TGGAAAATCATGAGTATATG+GGG | 0.558196 | 5_4:+11420819 | Msa0837440:CDS |
| TGTCATGTTTGCTGATTGGA+TGG | 0.558982 | 5_4:+11417745 | Msa0837440:CDS |
| AAGCCCCTACCAAAGGGTCC+AGG | 0.559115 | 5_4:+11418681 | Msa0837440:CDS |
| CCAATGATCAAAGCAAGCAT+AGG | 0.560848 | 5_4:-11417368 | None:intergenic |
| AGTGATTAAATCAAAGGGAA+AGG | 0.562365 | 5_4:+11419391 | Msa0837440:CDS |
| TTATCCTTCTCACCACATGC+TGG | 0.565982 | 5_4:-11420579 | None:intergenic |
| CAATGATCAAAGCAAGCATA+GGG | 0.568436 | 5_4:-11417367 | None:intergenic |
| TTTGTTGAGAAACAAACGAA+AGG | 0.573470 | 5_4:+11417063 | Msa0837440:CDS |
| AGGTGAAATACAAGATGAAG+TGG | 0.578510 | 5_4:+11418701 | Msa0837440:CDS |
| GTGTGGAATGTGAGAAACTA+GGG | 0.584055 | 5_4:-11416926 | None:intergenic |
| TCAACAAAAGCATTATTCAA+AGG | 0.585877 | 5_4:+11418195 | Msa0837440:CDS |
| TGTTTATGTGGAGTAATGGC+TGG | 0.586217 | 5_4:+11419452 | Msa0837440:CDS |
| AGAAATGGGAATTCCTCCGC+AGG | 0.587719 | 5_4:+11419532 | Msa0837440:CDS |
| AGACTACAAGCCCCTACCAA+AGG | 0.602171 | 5_4:+11418674 | Msa0837440:CDS |
| ACGAAGTATATAGTCGAGGA+AGG | 0.604435 | 5_4:-11416811 | None:intergenic |
| CTGGCCAGCATGTGGTGAGA+AGG | 0.606592 | 5_4:+11420575 | Msa0837440:CDS |
| CTTATTCCAAGCATCAGCAT+AGG | 0.609800 | 5_4:-11417704 | None:intergenic |
| CTTTGGTTACTGCAGCAACA+TGG | 0.613177 | 5_4:+11416962 | Msa0837440:CDS |
| GAAGCTGTATGCATATACAA+AGG | 0.625248 | 5_4:+11419362 | Msa0837440:CDS |
| TAATAATTGATGCACGACCA+AGG | 0.625797 | 5_4:-11420609 | None:intergenic |
| TGTGTGGAATGTGAGAAACT+AGG | 0.636976 | 5_4:-11416927 | None:intergenic |
| ATTCCCATTTCTAGAAACAG+TGG | 0.643732 | 5_4:-11419521 | None:intergenic |
| AGTTTCTCACATTCCACACA+TGG | 0.645028 | 5_4:+11416930 | Msa0837440:exon |
| GTAATATTGGACTACTGACA+TGG | 0.648060 | 5_4:-11420212 | None:intergenic |
| GAAATGGCTGTAGAAGACTT+GGG | 0.659724 | 5_4:-11417398 | None:intergenic |
| TTCTACGAAGTATATAGTCG+AGG | 0.662505 | 5_4:-11416815 | None:intergenic |
| TATGAAGAGTGTACCTGCGG+AGG | 0.676375 | 5_4:-11419545 | None:intergenic |
| ACTACTTACCGTAAGGTACG+GGG | 0.690253 | 5_4:-11420249 | None:intergenic |
| TGACATTGCAGATCACAACA+AGG | 0.693281 | 5_4:-11416999 | None:intergenic |
| GGAATGTGAGAAACTAGGGA+TGG | 0.696875 | 5_4:-11416922 | None:intergenic |
| ATATTGGACTACTGACATGG+AGG | 0.734752 | 5_4:-11420209 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAAAAATTTAAAAAA+TGG | - | chr5_4:11419143-11419162 | None:intergenic | 0.0% |
| !!! | TTATTATTATGCTTTTTTAA+CGG | + | chr5_4:11417447-11417466 | Msa0837440:intron | 10.0% |
| !!! | TTTTTTTTCTTTTAGAATTA+AGG | - | chr5_4:11417897-11417916 | None:intergenic | 10.0% |
| !! | CAAATTATGAAAAAATAATT+AGG | - | chr5_4:11419904-11419923 | None:intergenic | 10.0% |
| !! | AAAACTTTCAAAATTTATAA+AGG | + | chr5_4:11420052-11420071 | Msa0837440:intron | 10.0% |
| !! | GCAAAATATAAAATAAATTA+AGG | - | chr5_4:11420995-11421014 | None:intergenic | 10.0% |
| !!! | ATTTATTTTATATTTTGCAA+TGG | + | chr5_4:11420997-11421016 | Msa0837440:three_prime_UTR | 10.0% |
| !! | AACAATAAAAAAAAAAGTTG+AGG | + | chr5_4:11416847-11416866 | Msa0837440:five_prime_UTR | 15.0% |
| !!! | AATTTTCATATTATGTGTTT+TGG | + | chr5_4:11417176-11417195 | Msa0837440:intron | 15.0% |
| !! | GTTAACATGAAATAATTAAT+TGG | + | chr5_4:11418161-11418180 | Msa0837440:intron | 15.0% |
| !! | TGAAATAATTAATTGGTTAT+AGG | + | chr5_4:11418168-11418187 | Msa0837440:intron | 15.0% |
| !!! | TTAGTTTTTGAATTATCTAA+TGG | + | chr5_4:11419288-11419307 | Msa0837440:intron | 15.0% |
| !! | TTTACAGATTTAAAAATACA+GGG | - | chr5_4:11419875-11419894 | None:intergenic | 15.0% |
| !!! | AATGAGAAATTTTAAAGTTT+TGG | - | chr5_4:11419994-11420013 | None:intergenic | 15.0% |
| !!! | TTTTAACATTATCTCTTATT+AGG | - | chr5_4:11420414-11420433 | None:intergenic | 15.0% |
| !!! | TACTTTCTATGATTTTTAAT+TGG | + | chr5_4:11420678-11420697 | Msa0837440:intron | 15.0% |
| !!! | CTTTGAAATATAATTATTTG+AGG | + | chr5_4:11420735-11420754 | Msa0837440:intron | 15.0% |
| !! | GTTATATAAAAACAAGATGT+AGG | + | chr5_4:11416758-11416777 | Msa0837440:five_prime_UTR | 20.0% |
| !!! | TATTATGTGTTTTGGTTAAT+TGG | + | chr5_4:11417184-11417203 | Msa0837440:intron | 20.0% |
| !! | ATTTGATTGGAAAATTATAG+TGG | + | chr5_4:11417274-11417293 | Msa0837440:CDS | 20.0% |
| !! | TTTGATTGGAAAATTATAGT+GGG | + | chr5_4:11417275-11417294 | Msa0837440:CDS | 20.0% |
| !! | TATTAATCAAGAATATAAGC+AGG | - | chr5_4:11417546-11417565 | None:intergenic | 20.0% |
| !!! | TTTCTTTTAGAATTAAGGTT+CGG | - | chr5_4:11417892-11417911 | None:intergenic | 20.0% |
| !! | AGAAAAAAAATGATCGAAAA+TGG | + | chr5_4:11417907-11417926 | Msa0837440:intron | 20.0% |
| !!! | GTGTTTTTAATTTGCTTATA+AGG | - | chr5_4:11418391-11418410 | None:intergenic | 20.0% |
| !! | GTATCAAAGAATTTATTTAC+CGG | - | chr5_4:11418556-11418575 | None:intergenic | 20.0% |
| !! | TAAGTTCCAACAATAAATAT+TGG | - | chr5_4:11418605-11418624 | None:intergenic | 20.0% |
| !! | ATATTGCTATATTGTTTATG+TGG | + | chr5_4:11419440-11419459 | Msa0837440:CDS | 20.0% |
| !!! | AATTGTCAACACTAATTTTA+AGG | + | chr5_4:11419714-11419733 | Msa0837440:intron | 20.0% |
| !!! | ATTGTCAACACTAATTTTAA+GGG | + | chr5_4:11419715-11419734 | Msa0837440:intron | 20.0% |
| !! | TAAATACCACCTATAAATTT+AGG | + | chr5_4:11419742-11419761 | Msa0837440:intron | 20.0% |
| !! | ATTTCGAATCCTAAATTTAT+AGG | - | chr5_4:11419754-11419773 | None:intergenic | 20.0% |
| !! | GTAAAATGTTAATCACAAAT+TGG | + | chr5_4:11419786-11419805 | Msa0837440:intron | 20.0% |
| !!! | ATCTTTCCTTTTTTTCAAAT+TGG | + | chr5_4:11419848-11419867 | Msa0837440:intron | 20.0% |
| !! | CTTTACAGATTTAAAAATAC+AGG | - | chr5_4:11419876-11419895 | None:intergenic | 20.0% |
| !! | AACGATCTAAATAGTAATAT+TGG | - | chr5_4:11420228-11420247 | None:intergenic | 20.0% |
| !!! | ATTGTAAAACTTGTTACTAT+CGG | + | chr5_4:11420480-11420499 | Msa0837440:intron | 20.0% |
| !!! | AATTTTCACTTTGAATACTA+AGG | + | chr5_4:11421060-11421079 | Msa0837440:three_prime_UTR | 20.0% |
| ! | AAAAAAAAAGTTGAGGAAAG+TGG | + | chr5_4:11416854-11416873 | Msa0837440:five_prime_UTR | 25.0% |
| !!! | AGTTTTGAAAGAAAAAGAAC+CGG | + | chr5_4:11417035-11417054 | Msa0837440:CDS | 25.0% |
| ! | CTGAAATGCATTATATTTAC+TGG | + | chr5_4:11417231-11417250 | Msa0837440:intron | 25.0% |
| !!! | TATTATGCTTTTTTAACGGT+AGG | + | chr5_4:11417451-11417470 | Msa0837440:intron | 25.0% |
| !!! | ATCTTTGATTTGATAATTGC+AGG | + | chr5_4:11417575-11417594 | Msa0837440:intron | 25.0% |
| ! | ATAATTGCAGGTATGATTAT+GGG | + | chr5_4:11417587-11417606 | Msa0837440:intron | 25.0% |
| ! | TTACTCATCATCTTATTCAT+AGG | + | chr5_4:11417776-11417795 | Msa0837440:CDS | 25.0% |
| ! | AACACTTGTAACTACTAATT+TGG | - | chr5_4:11417842-11417861 | None:intergenic | 25.0% |
| !! | CTGTTTGATCTTTTATCTAA+CGG | + | chr5_4:11418042-11418061 | Msa0837440:intron | 25.0% |
| !!! | TCAACAAAAGCATTATTCAA+AGG | + | chr5_4:11418195-11418214 | Msa0837440:CDS | 25.0% |
| !! | TATTCAAAGGCATAAATACA+TGG | + | chr5_4:11418208-11418227 | Msa0837440:CDS | 25.0% |
| ! | AAAGGAAACAATGTTGAAAA+AGG | + | chr5_4:11418233-11418252 | Msa0837440:CDS | 25.0% |
| ! | TCAAAAAATTTAGGTGTCTA+AGG | - | chr5_4:11418267-11418286 | None:intergenic | 25.0% |
| ! | GACTCAACTTCAAAAAATTT+AGG | - | chr5_4:11418276-11418295 | None:intergenic | 25.0% |
| ! | AAGCAAATTAAAAACACCTT+AGG | + | chr5_4:11418394-11418413 | Msa0837440:intron | 25.0% |
| ! | ATAAATTCTTTGATACGCAT+CGG | + | chr5_4:11418560-11418579 | Msa0837440:intron | 25.0% |
| ! | ACATCTCCAATATTTATTGT+TGG | + | chr5_4:11418596-11418615 | Msa0837440:intron | 25.0% |
| ! | CAATAAATGTTCTTTAGCAA+AGG | - | chr5_4:11418823-11418842 | None:intergenic | 25.0% |
| ! | CTTTGCTAAAGAACATTTAT+TGG | + | chr5_4:11418821-11418840 | Msa0837440:CDS | 25.0% |
| ! | AACAATCTGAACAATTAGAA+AGG | - | chr5_4:11418881-11418900 | None:intergenic | 25.0% |
| ! | TCTAATTGTTCAGATTGTTA+AGG | + | chr5_4:11418882-11418901 | Msa0837440:CDS | 25.0% |
| ! | TATTAACCTTTCGATTCTTT+GGG | + | chr5_4:11418936-11418955 | Msa0837440:intron | 25.0% |
| !!! | TTTACTTTTCAACTGAACTT+CGG | - | chr5_4:11418980-11418999 | None:intergenic | 25.0% |
| ! | ATTAAGAATCCAATACTCAA+TGG | - | chr5_4:11419209-11419228 | None:intergenic | 25.0% |
| ! | AAACTAATTAAACATGTGCT+TGG | - | chr5_4:11419275-11419294 | None:intergenic | 25.0% |
| ! | AACAAGAGTGATTAAATCAA+AGG | + | chr5_4:11419385-11419404 | Msa0837440:CDS | 25.0% |
| ! | ACAAGAGTGATTAAATCAAA+GGG | + | chr5_4:11419386-11419405 | Msa0837440:CDS | 25.0% |
| ! | ATATTGTTTATGTGGAGTAA+TGG | + | chr5_4:11419448-11419467 | Msa0837440:CDS | 25.0% |
| !! | TTGTCAACACTAATTTTAAG+GGG | + | chr5_4:11419716-11419735 | Msa0837440:intron | 25.0% |
| ! | TTGTAGTTTCAAAAAGTTGA+AGG | - | chr5_4:11419964-11419983 | None:intergenic | 25.0% |
| !! | TGAGTTTCATCATTTTACAT+AGG | + | chr5_4:11420352-11420371 | Msa0837440:intron | 25.0% |
| ! | TTGGAAAATCATGAGTATAT+GGG | + | chr5_4:11420818-11420837 | Msa0837440:CDS | 25.0% |
| !!! | TTTTTCAAACACTTGTGATA+TGG | + | chr5_4:11420912-11420931 | Msa0837440:three_prime_UTR | 25.0% |
| !! | CAAATTTGCTTGAATGAAAA+TGG | - | chr5_4:11420947-11420966 | None:intergenic | 25.0% |
| !! | ATTTTATATTTTGCAATGGC+TGG | + | chr5_4:11421001-11421020 | Msa0837440:three_prime_UTR | 25.0% |
| TTTGTTGAGAAACAAACGAA+AGG | + | chr5_4:11417063-11417082 | Msa0837440:CDS | 30.0% | |
| ! | GAAAGGATTTCTAAAAGCAA+TGG | + | chr5_4:11417080-11417099 | Msa0837440:CDS | 30.0% |
| ! | AAGCAATGGTTGATTTCTTA+TGG | + | chr5_4:11417094-11417113 | Msa0837440:CDS | 30.0% |
| ! | AGCAATGGTTGATTTCTTAT+GGG | + | chr5_4:11417095-11417114 | Msa0837440:CDS | 30.0% |
| AATGCATTATATTTACTGGC+TGG | + | chr5_4:11417235-11417254 | Msa0837440:intron | 30.0% | |
| AGCAGGAAATGAAATTTGAT+TGG | + | chr5_4:11417261-11417280 | Msa0837440:intron | 30.0% | |
| GATAATTGCAGGTATGATTA+TGG | + | chr5_4:11417586-11417605 | Msa0837440:intron | 30.0% | |
| CAACTGTTTACTACAATATG+AGG | + | chr5_4:11417621-11417640 | Msa0837440:CDS | 30.0% | |
| TAGTAGTTACAAGTGTTTGA+CGG | + | chr5_4:11417845-11417864 | Msa0837440:intron | 30.0% | |
| !!! | ATTTCCTGGAGTTTTATTCT+CGG | + | chr5_4:11417946-11417965 | Msa0837440:intron | 30.0% |
| GATGAAGTGATAACCTATTA+TGG | + | chr5_4:11418110-11418129 | Msa0837440:intron | 30.0% | |
| AGTGATAACCTATTATGGTT+TGG | + | chr5_4:11418115-11418134 | Msa0837440:intron | 30.0% | |
| TAGATAAGCCAAACCATAAT+AGG | - | chr5_4:11418126-11418145 | None:intergenic | 30.0% | |
| TGGCTTATCTATTATTGTGT+TGG | + | chr5_4:11418135-11418154 | Msa0837440:intron | 30.0% | |
| AGGCATAAATACATGGAAAA+AGG | + | chr5_4:11418215-11418234 | Msa0837440:CDS | 30.0% | |
| AGCTAAAATAAGTTGTAAGC+CGG | + | chr5_4:11418534-11418553 | Msa0837440:intron | 30.0% | |
| AATACAAGATGAAGTGGTAA+TGG | + | chr5_4:11418707-11418726 | Msa0837440:intron | 30.0% | |
| TATCACTTCTTGTCTATGTT+TGG | + | chr5_4:11418851-11418870 | Msa0837440:CDS | 30.0% | |
| ATCACTTCTTGTCTATGTTT+GGG | + | chr5_4:11418852-11418871 | Msa0837440:CDS | 30.0% | |
| GTATTAACCTTTCGATTCTT+TGG | + | chr5_4:11418935-11418954 | Msa0837440:intron | 30.0% | |
| ATTAACCTTTCGATTCTTTG+GGG | + | chr5_4:11418937-11418956 | Msa0837440:intron | 30.0% | |
| ! | TTGCCTTAACAATTCGTTTT+AGG | + | chr5_4:11419045-11419064 | Msa0837440:intron | 30.0% |
| TTATAATGAACCGAACAATC+AGG | - | chr5_4:11419092-11419111 | None:intergenic | 30.0% | |
| TCTGCATAGTAACACATAAA+AGG | - | chr5_4:11419168-11419187 | None:intergenic | 30.0% | |
| TTGGATTCTTAATTTCTTGC+AGG | + | chr5_4:11419216-11419235 | Msa0837440:CDS | 30.0% | |
| AATTAAACATGTGCTTGGTA+AGG | - | chr5_4:11419270-11419289 | None:intergenic | 30.0% | |
| ! | GCATATGATTTTCCAATTCT+AGG | + | chr5_4:11419310-11419329 | Msa0837440:intron | 30.0% |
| AGTGATTAAATCAAAGGGAA+AGG | + | chr5_4:11419391-11419410 | Msa0837440:CDS | 30.0% | |
| AGGGAAAGGAAGTTAAAAAT+TGG | + | chr5_4:11419405-11419424 | Msa0837440:CDS | 30.0% | |
| TCGAATCCTAAATTTATAGG+TGG | - | chr5_4:11419751-11419770 | None:intergenic | 30.0% | |
| TTAGAAAACTACTTACCGTA+AGG | - | chr5_4:11420259-11420278 | None:intergenic | 30.0% | |
| TTATTAGGTAAAACGCATCT+GGG | - | chr5_4:11420399-11420418 | None:intergenic | 30.0% | |
| GATGTCAAATTAACATCAAG+AGG | - | chr5_4:11420456-11420475 | None:intergenic | 30.0% | |
| TTCATAAGTGCAATCAGTTT+AGG | + | chr5_4:11420655-11420674 | Msa0837440:CDS | 30.0% | |
| ! | TTCTTTCTTTTGTGTATCAC+AGG | + | chr5_4:11420764-11420783 | Msa0837440:intron | 30.0% |
| GTTGGAAAATCATGAGTATA+TGG | + | chr5_4:11420817-11420836 | Msa0837440:CDS | 30.0% | |
| TGGAAAATCATGAGTATATG+GGG | + | chr5_4:11420819-11420838 | Msa0837440:CDS | 30.0% | |
| TGCTTGAATGAAAATGGAAT+AGG | - | chr5_4:11420941-11420960 | None:intergenic | 30.0% | |
| TTCTACGAAGTATATAGTCG+AGG | - | chr5_4:11416818-11416837 | None:intergenic | 35.0% | |
| ! | AAAGATTTTGTTGCCATGTG+TGG | - | chr5_4:11416946-11416965 | None:intergenic | 35.0% |
| ACACATGGCAACAAAATCTT+TGG | + | chr5_4:11416945-11416964 | Msa0837440:exon | 35.0% | |
| TGTTTCTCAACAAACTTTGC+CGG | - | chr5_4:11417057-11417076 | None:intergenic | 35.0% | |
| ! | GTTGATTTCTTATGGGAAAG+TGG | + | chr5_4:11417102-11417121 | Msa0837440:CDS | 35.0% |
| AGTCTTCTTATGAACCTGTT+TGG | + | chr5_4:11417127-11417146 | Msa0837440:CDS | 35.0% | |
| GCATAATGTTATGAACTCAC+AGG | - | chr5_4:11417153-11417172 | None:intergenic | 35.0% | |
| ! | ATTATAGTGGGATCAATCGT+TGG | + | chr5_4:11417287-11417306 | Msa0837440:CDS | 35.0% |
| CAATGATCAAAGCAAGCATA+GGG | - | chr5_4:11417370-11417389 | None:intergenic | 35.0% | |
| AACACACTTACACTTGGAAA+TGG | - | chr5_4:11417417-11417436 | None:intergenic | 35.0% | |
| ! | AGTGTGAGTGTTGTAAATTC+TGG | - | chr5_4:11417494-11417513 | None:intergenic | 35.0% |
| GCCACTTATAGATTACGATT+TGG | + | chr5_4:11417667-11417686 | Msa0837440:CDS | 35.0% | |
| GCCAAATCGTAATCTATAAG+TGG | - | chr5_4:11417671-11417690 | None:intergenic | 35.0% | |
| CTGATGCTTGGAATAAGTAT+TGG | + | chr5_4:11417710-11417729 | Msa0837440:CDS | 35.0% | |
| ! | GTAATGTCATGTTTGCTGAT+TGG | + | chr5_4:11417741-11417760 | Msa0837440:CDS | 35.0% |
| TACTAATTTGGCGATATCAC+TGG | - | chr5_4:11417830-11417849 | None:intergenic | 35.0% | |
| TTGGAAGAAGAACCAAAAAC+TGG | + | chr5_4:11418357-11418376 | Msa0837440:CDS | 35.0% | |
| ! | CCTTTCACTCTATTTTCCTA+AGG | - | chr5_4:11418413-11418432 | None:intergenic | 35.0% |
| CCTTAGGAAAATAGAGTGAA+AGG | + | chr5_4:11418410-11418429 | Msa0837440:intron | 35.0% | |
| ACTTCATCTTGTATTTCACC+TGG | - | chr5_4:11418702-11418721 | None:intergenic | 35.0% | |
| AGGTGAAATACAAGATGAAG+TGG | + | chr5_4:11418701-11418720 | Msa0837440:CDS | 35.0% | |
| AATGTATCACTTATCCATGC+AGG | + | chr5_4:11418795-11418814 | Msa0837440:intron | 35.0% | |
| CAACTGAACTTCGGATTATA+AGG | - | chr5_4:11418971-11418990 | None:intergenic | 35.0% | |
| TCAATCTAGATATCGAACTC+AGG | + | chr5_4:11419021-11419040 | Msa0837440:intron | 35.0% | |
| CCACCTAAAACGAATTGTTA+AGG | - | chr5_4:11419051-11419070 | None:intergenic | 35.0% | |
| !! | CCTTAACAATTCGTTTTAGG+TGG | + | chr5_4:11419048-11419067 | Msa0837440:intron | 35.0% |
| TAGCAATAGGAACCTAGAAT+TGG | - | chr5_4:11419325-11419344 | None:intergenic | 35.0% | |
| ACTGTAACAGAGATAGCAAT+AGG | - | chr5_4:11419338-11419357 | None:intergenic | 35.0% | |
| GAAGCTGTATGCATATACAA+AGG | + | chr5_4:11419362-11419381 | Msa0837440:CDS | 35.0% | |
| ! | ATTCCCATTTCTAGAAACAG+TGG | - | chr5_4:11419524-11419543 | None:intergenic | 35.0% |
| CTTCATATCTCTTGTGTGTT+CGG | + | chr5_4:11419561-11419580 | Msa0837440:intron | 35.0% | |
| CAGGGACCAATTTGAAAAAA+AGG | - | chr5_4:11419857-11419876 | None:intergenic | 35.0% | |
| ! | ACAAATTTGTTCTCTGATGC+AGG | + | chr5_4:11420147-11420166 | Msa0837440:intron | 35.0% |
| GTAATATTGGACTACTGACA+TGG | - | chr5_4:11420215-11420234 | None:intergenic | 35.0% | |
| AAACTACTTACCGTAAGGTA+CGG | - | chr5_4:11420254-11420273 | None:intergenic | 35.0% | |
| CTTATTAGGTAAAACGCATC+TGG | - | chr5_4:11420400-11420419 | None:intergenic | 35.0% | |
| !! | TAACATCAAGAGGAGTGTTA+TGG | - | chr5_4:11420446-11420465 | None:intergenic | 35.0% |
| !! | TGCAGCTTCATACTTTGTTT+TGG | + | chr5_4:11420531-11420550 | Msa0837440:intron | 35.0% |
| AGAAGGATAATTGCAATCCT+TGG | + | chr5_4:11420592-11420611 | Msa0837440:CDS | 35.0% | |
| TAATAATTGATGCACGACCA+AGG | - | chr5_4:11420612-11420631 | None:intergenic | 35.0% | |
| ACTGATTGCACTTATGAAGA+TGG | - | chr5_4:11420653-11420672 | None:intergenic | 35.0% | |
| ! | TTTCTTTTGTGTATCACAGG+TGG | + | chr5_4:11420767-11420786 | Msa0837440:intron | 35.0% |
| AGAGAACATGATTGTGAAGT+TGG | + | chr5_4:11420799-11420818 | Msa0837440:CDS | 35.0% | |
| TCTTTGCACTCAATAAGCTT+AGG | + | chr5_4:11420850-11420869 | Msa0837440:exon | 35.0% | |
| ACGAAGTATATAGTCGAGGA+AGG | - | chr5_4:11416814-11416833 | None:intergenic | 40.0% | |
| GAAACTAGGGATGGAAATCT+AGG | - | chr5_4:11416916-11416935 | None:intergenic | 40.0% | |
| GTGTGGAATGTGAGAAACTA+GGG | - | chr5_4:11416929-11416948 | None:intergenic | 40.0% | |
| TGTGTGGAATGTGAGAAACT+AGG | - | chr5_4:11416930-11416949 | None:intergenic | 40.0% | |
| AGTTTCTCACATTCCACACA+TGG | + | chr5_4:11416930-11416949 | Msa0837440:exon | 40.0% | |
| TGACATTGCAGATCACAACA+AGG | - | chr5_4:11417002-11417021 | None:intergenic | 40.0% | |
| GGATCAATCGTTGGATTCTT+GGG | + | chr5_4:11417296-11417315 | Msa0837440:CDS | 40.0% | |
| CCAATGATCAAAGCAAGCAT+AGG | - | chr5_4:11417371-11417390 | None:intergenic | 40.0% | |
| CCTATGCTTGCTTTGATCAT+TGG | + | chr5_4:11417368-11417387 | Msa0837440:CDS | 40.0% | |
| GAAATGGCTGTAGAAGACTT+GGG | - | chr5_4:11417401-11417420 | None:intergenic | 40.0% | |
| CACACAAACACACTTACACT+TGG | - | chr5_4:11417423-11417442 | None:intergenic | 40.0% | |
| TAAGTGGCATGTCTAGTGTT+GGG | - | chr5_4:11417655-11417674 | None:intergenic | 40.0% | |
| ATAAGTGGCATGTCTAGTGT+TGG | - | chr5_4:11417656-11417675 | None:intergenic | 40.0% | |
| CTTATTCCAAGCATCAGCAT+AGG | - | chr5_4:11417707-11417726 | None:intergenic | 40.0% | |
| ! | TGTCATGTTTGCTGATTGGA+TGG | + | chr5_4:11417745-11417764 | Msa0837440:CDS | 40.0% |
| AATTTGGCGATATCACTGGT+CGG | - | chr5_4:11417826-11417845 | None:intergenic | 40.0% | |
| GGTTGTGAGCTAATTGAGTT+AGG | + | chr5_4:11417866-11417885 | Msa0837440:intron | 40.0% | |
| ! | AGCGTGCTGTTAAAATTTCC+TGG | + | chr5_4:11417932-11417951 | Msa0837440:intron | 40.0% |
| ATGACCGAGAATAAAACTCC+AGG | - | chr5_4:11417953-11417972 | None:intergenic | 40.0% | |
| ! | AGAAAGCTACTTTGACATGC+AGG | + | chr5_4:11418320-11418339 | Msa0837440:intron | 40.0% |
| GAAGAAGAACCAAAAACTGG+TGG | + | chr5_4:11418360-11418379 | Msa0837440:CDS | 40.0% | |
| ! | AAGGACTTACCACCAGTTTT+TGG | - | chr5_4:11418372-11418391 | None:intergenic | 40.0% |
| ACTTCTTGTCTATGTTTGGG+TGG | + | chr5_4:11418855-11418874 | Msa0837440:CDS | 40.0% | |
| ! | CTTTCGATTCTTTGGGGAAA+GGG | + | chr5_4:11418943-11418962 | Msa0837440:intron | 40.0% |
| ! | TTTCGATTCTTTGGGGAAAG+GGG | + | chr5_4:11418944-11418963 | Msa0837440:intron | 40.0% |
| AACCACTTAGCCTGATTGTT+CGG | + | chr5_4:11419079-11419098 | Msa0837440:intron | 40.0% | |
| ! | AGACTTGCTCCATTGAGTAT+TGG | + | chr5_4:11419197-11419216 | Msa0837440:CDS | 40.0% |
| TGTTTATGTGGAGTAATGGC+TGG | + | chr5_4:11419452-11419471 | Msa0837440:CDS | 40.0% | |
| ! | AGATATGAAGAGTGTACCTG+CGG | - | chr5_4:11419551-11419570 | None:intergenic | 40.0% |
| !!! | CTCATAGAGCTCTAGCTTTT+GGG | + | chr5_4:11420086-11420105 | Msa0837440:intron | 40.0% |
| !!! | TCATAGAGCTCTAGCTTTTG+GGG | + | chr5_4:11420087-11420106 | Msa0837440:intron | 40.0% |
| CATGGAGGATGAAAAAAGCA+TGG | - | chr5_4:11420197-11420216 | None:intergenic | 40.0% | |
| ATATTGGACTACTGACATGG+AGG | - | chr5_4:11420212-11420231 | None:intergenic | 40.0% | |
| AACTACTTACCGTAAGGTAC+GGG | - | chr5_4:11420253-11420272 | None:intergenic | 40.0% | |
| CTAGCGCTCACTTTCTTATT+AGG | + | chr5_4:11420318-11420337 | Msa0837440:intron | 40.0% | |
| GGAATGTGAGAAACTAGGGA+TGG | - | chr5_4:11416925-11416944 | None:intergenic | 45.0% | |
| CTTTGGTTACTGCAGCAACA+TGG | + | chr5_4:11416962-11416981 | Msa0837440:CDS | 45.0% | |
| TATGAACTCACAGGCCAAAC+AGG | - | chr5_4:11417144-11417163 | None:intergenic | 45.0% | |
| GGGATCAATCGTTGGATTCT+TGG | + | chr5_4:11417295-11417314 | Msa0837440:CDS | 45.0% | |
| GGAAATGGCTGTAGAAGACT+TGG | - | chr5_4:11417402-11417421 | None:intergenic | 45.0% | |
| GCAGGACTAACGCAATTAGT+TGG | - | chr5_4:11417528-11417547 | None:intergenic | 45.0% | |
| AGTCTCATTCCTTCATCCTC+TGG | + | chr5_4:11418292-11418311 | Msa0837440:intron | 45.0% | |
| TTCTCATCACCAGAGGATGA+AGG | - | chr5_4:11418304-11418323 | None:intergenic | 45.0% | |
| AGTAGCTTTCTCATCACCAG+AGG | - | chr5_4:11418311-11418330 | None:intergenic | 45.0% | |
| TGGTTCTTCTTCCAACTGCT+TGG | - | chr5_4:11418352-11418371 | None:intergenic | 45.0% | |
| TGTATTTCACCTGGACCCTT+TGG | - | chr5_4:11418693-11418712 | None:intergenic | 45.0% | |
| CCTTTCCCCAAAGAATCGAA+AGG | - | chr5_4:11418945-11418964 | None:intergenic | 45.0% | |
| ! | CCTTTCGATTCTTTGGGGAA+AGG | + | chr5_4:11418942-11418961 | Msa0837440:intron | 45.0% |
| AACCGAACAATCAGGCTAAG+TGG | - | chr5_4:11419084-11419103 | None:intergenic | 45.0% | |
| ATGTGGAGTAATGGCTGGTA+TGG | + | chr5_4:11419457-11419476 | Msa0837440:CDS | 45.0% | |
| TAATGGCTGGTATGGTTGGA+GGG | + | chr5_4:11419465-11419484 | Msa0837440:CDS | 45.0% | |
| ! | TCTAGGAGGTGGCTTCATTT+TGG | + | chr5_4:11419496-11419515 | Msa0837440:CDS | 45.0% |
| ! | CTAGGAGGTGGCTTCATTTT+GGG | + | chr5_4:11419497-11419516 | Msa0837440:CDS | 45.0% |
| ! | TAGGAGGTGGCTTCATTTTG+GGG | + | chr5_4:11419498-11419517 | Msa0837440:CDS | 45.0% |
| !! | GGGCCACTGTTTCTAGAAAT+GGG | + | chr5_4:11419518-11419537 | Msa0837440:CDS | 45.0% |
| CCAAAAGCTAGAGCTCTATG+AGG | - | chr5_4:11420088-11420107 | None:intergenic | 45.0% | |
| !!! | CCTCATAGAGCTCTAGCTTT+TGG | + | chr5_4:11420085-11420104 | Msa0837440:intron | 45.0% |
| ACTACTTACCGTAAGGTACG+GGG | - | chr5_4:11420252-11420271 | None:intergenic | 45.0% | |
| TTATCCTTCTCACCACATGC+TGG | - | chr5_4:11420582-11420601 | None:intergenic | 45.0% | |
| TTGTGTATCACAGGTGGAGT+AGG | + | chr5_4:11420773-11420792 | Msa0837440:intron | 45.0% | |
| !! | AAATTATGAAAAAATAATTA+GGG | - | chr5_4:11419903-11419922 | None:intergenic | 5.0% |
| !!! | CTTTAAATTTTTAAAATTTA+AGG | - | chr5_4:11419936-11419955 | None:intergenic | 5.0% |
| ! | TATTTACTGGCTGGCTGAGC+AGG | + | chr5_4:11417244-11417263 | Msa0837440:intron | 50.0% |
| TGGATTCTTGGGAGCAGCTT+TGG | + | chr5_4:11417307-11417326 | Msa0837440:CDS | 50.0% | |
| GGATTCTTGGGAGCAGCTTT+GGG | + | chr5_4:11417308-11417327 | Msa0837440:CDS | 50.0% | |
| !! | TTGGGAAGTGTTGGAGGTGT+AGG | + | chr5_4:11417326-11417345 | Msa0837440:CDS | 50.0% |
| TTCCAGCCTATGCTGATGCT+TGG | + | chr5_4:11417698-11417717 | Msa0837440:CDS | 50.0% | |
| TTCCAAGCATCAGCATAGGC+TGG | - | chr5_4:11417703-11417722 | None:intergenic | 50.0% | |
| CGTTGATCTAGATCGACTGC+AGG | - | chr5_4:11418082-11418101 | None:intergenic | 50.0% | |
| AGACTACAAGCCCCTACCAA+AGG | + | chr5_4:11418674-11418693 | Msa0837440:CDS | 50.0% | |
| GACTACAAGCCCCTACCAAA+GGG | + | chr5_4:11418675-11418694 | Msa0837440:CDS | 50.0% | |
| TTCACCTGGACCCTTTGGTA+GGG | - | chr5_4:11418688-11418707 | None:intergenic | 50.0% | |
| TTTCACCTGGACCCTTTGGT+AGG | - | chr5_4:11418689-11418708 | None:intergenic | 50.0% | |
| !! | CTTTAGCAAAGGCACCTGCA+TGG | - | chr5_4:11418812-11418831 | None:intergenic | 50.0% |
| GGAGTAATGGCTGGTATGGT+TGG | + | chr5_4:11419461-11419480 | Msa0837440:CDS | 50.0% | |
| GTAATGGCTGGTATGGTTGG+AGG | + | chr5_4:11419464-11419483 | Msa0837440:CDS | 50.0% | |
| !! | GGGGCCACTGTTTCTAGAAA+TGG | + | chr5_4:11419517-11419536 | Msa0837440:CDS | 50.0% |
| AGAAATGGGAATTCCTCCGC+AGG | + | chr5_4:11419532-11419551 | Msa0837440:CDS | 50.0% | |
| ! | TATGAAGAGTGTACCTGCGG+AGG | - | chr5_4:11419548-11419567 | None:intergenic | 50.0% |
| GATCGTTTCCCCGTACCTTA+CGG | + | chr5_4:11420241-11420260 | Msa0837440:CDS | 50.0% | |
| GCAACCATAGCTGCATTTGC+TGG | + | chr5_4:11420556-11420575 | Msa0837440:CDS | 50.0% | |
| !! | GGAGCAGCTTTGGGAAGTGT+TGG | + | chr5_4:11417317-11417336 | Msa0837440:CDS | 55.0% |
| !! | GCAGCTTTGGGAAGTGTTGG+AGG | + | chr5_4:11417320-11417339 | Msa0837440:CDS | 55.0% |
| !! | GGAAGTGTTGGAGGTGTAGG+AGG | + | chr5_4:11417329-11417348 | Msa0837440:CDS | 55.0% |
| ! | AGTGTTGGAGGTGTAGGAGG+TGG | + | chr5_4:11417332-11417351 | Msa0837440:CDS | 55.0% |
| TCACCTGGACCCTTTGGTAG+GGG | - | chr5_4:11418687-11418706 | None:intergenic | 55.0% | |
| GGTATGGTTGGAGGGTTGCT+TGG | + | chr5_4:11419473-11419492 | Msa0837440:CDS | 55.0% | |
| GTTGGAGGGTTGCTTGGTCT+AGG | + | chr5_4:11419479-11419498 | Msa0837440:CDS | 55.0% | |
| CTGGCCAGCAAATGCAGCTA+TGG | - | chr5_4:11420563-11420582 | None:intergenic | 55.0% | |
| ! | TGCATTTGCTGGCCAGCATG+TGG | + | chr5_4:11420567-11420586 | Msa0837440:CDS | 55.0% |
| ! | GTTGGAGGTGTAGGAGGTGG+TGG | + | chr5_4:11417335-11417354 | Msa0837440:CDS | 60.0% |
| GCAGGAAGCAGCCAAGCAGT+TGG | + | chr5_4:11418338-11418357 | Msa0837440:intron | 60.0% | |
| AAGCCCCTACCAAAGGGTCC+AGG | + | chr5_4:11418681-11418700 | Msa0837440:CDS | 60.0% | |
| GGAGGGTTGCTTGGTCTAGG+AGG | + | chr5_4:11419482-11419501 | Msa0837440:CDS | 60.0% | |
| GGGTTGCTTGGTCTAGGAGG+TGG | + | chr5_4:11419485-11419504 | Msa0837440:CDS | 60.0% | |
| CTGGCCAGCATGTGGTGAGA+AGG | + | chr5_4:11420575-11420594 | Msa0837440:CDS | 60.0% | |
| GGCGATATCACTGGTCGGCG+TGG | - | chr5_4:11417821-11417840 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 11416721 | 11421099 | 11416721 | ID=Msa0837440;Name=Msa0837440 |
| chr5_4 | mRNA | 11416721 | 11421099 | 11416721 | ID=Msa0837440-mRNA-1;Parent=Msa0837440;Name=Msa0837440-mRNA-1;_AED=0.04;_eAED=0.04;_QI=228|1|1|1|1|1|12|234|464 |
| chr5_4 | exon | 11416721 | 11417152 | 11416721 | ID=Msa0837440-mRNA-1:exon:4946;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11417266 | 11417425 | 11417266 | ID=Msa0837440-mRNA-1:exon:4947;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11417597 | 11417797 | 11417597 | ID=Msa0837440-mRNA-1:exon:4948;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11418190 | 11418254 | 11418190 | ID=Msa0837440-mRNA-1:exon:4949;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11418342 | 11418381 | 11418342 | ID=Msa0837440-mRNA-1:exon:4950;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11418673 | 11418722 | 11418673 | ID=Msa0837440-mRNA-1:exon:4951;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11418817 | 11418903 | 11418817 | ID=Msa0837440-mRNA-1:exon:4952;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11419187 | 11419237 | 11419187 | ID=Msa0837440-mRNA-1:exon:4953;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11419332 | 11419553 | 11419332 | ID=Msa0837440-mRNA-1:exon:4954;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11420169 | 11420262 | 11420169 | ID=Msa0837440-mRNA-1:exon:4955;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11420536 | 11420676 | 11420536 | ID=Msa0837440-mRNA-1:exon:4956;Parent=Msa0837440-mRNA-1 |
| chr5_4 | exon | 11420786 | 11421099 | 11420786 | ID=Msa0837440-mRNA-1:exon:4957;Parent=Msa0837440-mRNA-1 |
| chr5_4 | five_prime_UTR | 11416721 | 11416948 | 11416721 | ID=Msa0837440-mRNA-1:five_prime_utr;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11416949 | 11417152 | 11416949 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11417266 | 11417425 | 11417266 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11417597 | 11417797 | 11417597 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11418190 | 11418254 | 11418190 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11418342 | 11418381 | 11418342 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11418673 | 11418722 | 11418673 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11418817 | 11418903 | 11418817 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11419187 | 11419237 | 11419187 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11419332 | 11419553 | 11419332 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11420169 | 11420262 | 11420169 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11420536 | 11420676 | 11420536 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | CDS | 11420786 | 11420865 | 11420786 | ID=Msa0837440-mRNA-1:cds;Parent=Msa0837440-mRNA-1 |
| chr5_4 | three_prime_UTR | 11420866 | 11421099 | 11420866 | ID=Msa0837440-mRNA-1:three_prime_utr;Parent=Msa0837440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
