Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270790 | XP_013444242.1 | 95.473 | 729 | 33 | 0 | 10 | 738 | 1 | 729 | 0.0 | 1418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270790 | sp|Q657D6|ELF32_ORYSJ | 34.499 | 429 | 239 | 16 | 324 | 737 | 337 | 738 | 8.34e-50 | 190 |
| Msa1270790 | sp|Q657D6|ELF32_ORYSJ | 52.000 | 75 | 31 | 3 | 15 | 85 | 13 | 86 | 9.08e-13 | 75.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270790 | A0A072TL88 | 95.473 | 729 | 33 | 0 | 10 | 738 | 1 | 729 | 0.0 | 1418 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0070580 | Msa1270790 | 0.803318 | 3.691750e-49 | -8.615850e-47 |
| Msa0619450 | Msa1270790 | 0.817587 | 3.051802e-52 | -8.615850e-47 |
| Msa0619530 | Msa1270790 | 0.802204 | 6.267701e-49 | -8.615850e-47 |
| Msa0659580 | Msa1270790 | 0.819885 | 9.179631e-53 | -8.615850e-47 |
| Msa0663630 | Msa1270790 | 0.807516 | 4.866749e-50 | -8.615850e-47 |
| Msa0681100 | Msa1270790 | 0.814862 | 1.241088e-51 | -8.615850e-47 |
| Msa0808500 | Msa1270790 | 0.800510 | 1.393428e-48 | -8.615850e-47 |
| Msa0124460 | Msa1270790 | 0.803618 | 3.198590e-49 | -8.615850e-47 |
| Msa0168470 | Msa1270790 | 0.805377 | 1.375030e-49 | -8.615850e-47 |
| Msa0185540 | Msa1270790 | 0.810676 | 1.024028e-50 | -8.615850e-47 |
| Msa1232240 | Msa1270790 | 0.970460 | 1.191691e-131 | -8.615850e-47 |
| Msa1270790 | Msa1297490 | 0.808598 | 2.862482e-50 | -8.615850e-47 |
| Msa1270790 | Msa1297550 | 0.807772 | 4.293120e-50 | -8.615850e-47 |
| Msa1270790 | Msa1313070 | 0.987595 | 7.879769e-171 | -8.615850e-47 |
| Msa1270790 | Msa1387100 | 0.801209 | 1.003199e-48 | -8.615850e-47 |
| Msa1270790 | Msa1398150 | 0.814689 | 1.355545e-51 | -8.615850e-47 |
| Msa1270790 | Msa1427600 | 0.812020 | 5.231604e-51 | -8.615850e-47 |
| Msa1270790 | Msa1439000 | 0.811148 | 8.093529e-51 | -8.615850e-47 |
| Msa0476140 | Msa1270790 | 0.809215 | 2.112935e-50 | -8.615850e-47 |
| Msa0995130 | Msa1270790 | 0.802384 | 5.756068e-49 | -8.615850e-47 |
| Msa1022660 | Msa1270790 | 0.804263 | 2.348787e-49 | -8.615850e-47 |
| Msa1082640 | Msa1270790 | 0.802481 | 5.497032e-49 | -8.615850e-47 |
| Msa0271970 | Msa1270790 | 0.802876 | 4.555264e-49 | -8.615850e-47 |
| Msa0355990 | Msa1270790 | 0.800182 | 1.625304e-48 | -8.615850e-47 |
| Msa1163130 | Msa1270790 | 0.802799 | 4.725528e-49 | -8.615850e-47 |
| Msa1180080 | Msa1270790 | 0.985558 | 6.085184e-164 | -8.615850e-47 |
| Msa1202220 | Msa1270790 | 0.816607 | 5.068700e-52 | -8.615850e-47 |
| Msa1222900 | Msa1270790 | 0.806424 | 8.281327e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270790 | MtrunA17_Chr8g0341441 | 93.351 | 376 | 22 | 1 | 10 | 382 | 1 | 376 | 0.0 | 716 |
| Msa1270790 | MtrunA17_Chr8g0341451 | 96.848 | 349 | 11 | 0 | 390 | 738 | 1 | 349 | 0.0 | 696 |
| Msa1270790 | MtrunA17_Chr3g0135361 | 39.098 | 399 | 195 | 11 | 358 | 737 | 314 | 683 | 2.68e-62 | 221 |
| Msa1270790 | MtrunA17_Chr3g0135361 | 73.469 | 49 | 13 | 0 | 10 | 58 | 1 | 49 | 7.79e-16 | 81.6 |
| Msa1270790 | MtrunA17_Chr1g0151881 | 35.990 | 414 | 212 | 16 | 345 | 737 | 327 | 708 | 2.05e-45 | 173 |
| Msa1270790 | MtrunA17_Chr1g0151881 | 71.429 | 49 | 11 | 2 | 9 | 56 | 62 | 108 | 1.72e-13 | 74.3 |
| Msa1270790 | MtrunA17_Chr7g0220041 | 72.131 | 61 | 17 | 0 | 445 | 505 | 50 | 110 | 8.65e-20 | 85.5 |
| Msa1270790 | MtrunA17_Chr8g0341431 | 83.721 | 43 | 7 | 0 | 10 | 52 | 1 | 43 | 1.10e-18 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270790 | AT3G21320.1 | 33.588 | 393 | 178 | 12 | 346 | 737 | 223 | 533 | 1.17e-41 | 160 |
| Msa1270790 | AT2G25930.1 | 41.969 | 193 | 84 | 6 | 358 | 539 | 314 | 489 | 1.90e-32 | 134 |
| Msa1270790 | AT2G25930.1 | 70.370 | 54 | 16 | 0 | 10 | 63 | 1 | 54 | 1.63e-16 | 84.3 |
Find 139 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGACTCACTTGCTGATTT+TGG | 0.081692 | 8_3:+4096189 | None:intergenic |
| AATTATGGCAATCATCATTT+AGG | 0.100912 | 8_3:-4096888 | Msa1270790:CDS |
| TTGCGGACAAAATCAATTTA+AGG | 0.138535 | 8_3:-4098855 | Msa1270790:CDS |
| TAAATAATCGTGTTGAATTT+TGG | 0.172071 | 8_3:+4099341 | None:intergenic |
| GTTAATCTTTCTAGAATTAT+AGG | 0.175238 | 8_3:+4099422 | None:intergenic |
| CAAAAGATTCGGCTCCTTTC+CGG | 0.186551 | 8_3:-4096603 | Msa1270790:CDS |
| AATAATCAGCTTTCAAATTA+TGG | 0.193309 | 8_3:-4096903 | Msa1270790:CDS |
| AAACCTCTTCACTCATTAAA+TGG | 0.208223 | 8_3:-4099048 | Msa1270790:CDS |
| TTATTCCTTGGAGGTGCTTT+TGG | 0.238890 | 8_3:+4100245 | None:intergenic |
| AAAGTCAGATTGTAACTTAT+TGG | 0.265253 | 8_3:+4097055 | None:intergenic |
| TTGTGCTGATTTCAGTTCTA+TGG | 0.271781 | 8_3:+4099134 | None:intergenic |
| CATCTTTATGCTCTTTCATT+AGG | 0.275651 | 8_3:+4099100 | None:intergenic |
| GAACTGAAATCAGCACAATA+TGG | 0.287107 | 8_3:-4099129 | Msa1270790:CDS |
| CTCCCTTGATTGAAGCTCAT+TGG | 0.290810 | 8_3:+4096669 | None:intergenic |
| GACGATGTCGTAGGACTTAT+AGG | 0.304496 | 8_3:-4098652 | Msa1270790:CDS |
| TGAGTTGCATAGACTTATAA+AGG | 0.318584 | 8_3:-4097255 | Msa1270790:intron |
| GATTTCAGTTCTATGGTTCC+AGG | 0.329217 | 8_3:+4099141 | None:intergenic |
| CTCGGAAGTAGTGGCCTTCT+CGG | 0.331350 | 8_3:+4096989 | None:intergenic |
| GTCATGATGCCGCCAGCATT+TGG | 0.332846 | 8_3:+4096714 | None:intergenic |
| ATTATGGCAATCATCATTTA+GGG | 0.333611 | 8_3:-4096887 | Msa1270790:CDS |
| CATTGGTTTGGTGGTGGTGG+AGG | 0.338285 | 8_3:+4096801 | None:intergenic |
| TGCGGACAAAATCAATTTAA+GGG | 0.338609 | 8_3:-4098854 | Msa1270790:CDS |
| TTCCGTTGGCACCGACGTTT+TGG | 0.341515 | 8_3:-4096287 | Msa1270790:CDS |
| TTGTATTGATTTGAATATCT+TGG | 0.349172 | 8_3:+4096164 | None:intergenic |
| TTGGAGGAGGATGTTTCTAT+TGG | 0.366194 | 8_3:+4097074 | None:intergenic |
| GGCATCATGACACCGTTATA+CGG | 0.367402 | 8_3:-4096702 | Msa1270790:CDS |
| AGCACCTCCAAGGAATAAAA+TGG | 0.370824 | 8_3:-4100240 | Msa1270790:CDS |
| GACAATGCTTGGAGAGTGTT+TGG | 0.375029 | 8_3:+4096827 | None:intergenic |
| TCCAGCTCAGAATGTAGATT+TGG | 0.376287 | 8_3:-4098691 | Msa1270790:CDS |
| AATTCTCTGAAAACACTTGA+TGG | 0.378584 | 8_3:-4099303 | Msa1270790:CDS |
| GGAACTGTACAATTTCTTAG+AGG | 0.379244 | 8_3:+4100146 | None:intergenic |
| ATCTTTAATCGATGAGTTTG+AGG | 0.386250 | 8_3:+4099002 | None:intergenic |
| GGAGGGCATGGTCCAATGAT+TGG | 0.389281 | 8_3:+4096735 | None:intergenic |
| TTACTCTTGAGTGATGTTCC+TGG | 0.400202 | 8_3:+4096232 | None:intergenic |
| GAACAAATGGCACAATCTAA+TGG | 0.402223 | 8_3:-4096507 | Msa1270790:CDS |
| AGATGGACTTTGGTACAATA+TGG | 0.411206 | 8_3:+4096446 | None:intergenic |
| TTCTGAGCTGGATTTATTCA+AGG | 0.414643 | 8_3:+4098702 | None:intergenic |
| GATTAACTCAACCAAGTTGA+TGG | 0.415492 | 8_3:-4099406 | Msa1270790:CDS |
| GAGGAGGATGTTTCTATTGG+TGG | 0.417064 | 8_3:+4097077 | None:intergenic |
| TTATCTTCCAATGATTGATA+AGG | 0.419667 | 8_3:+4096378 | None:intergenic |
| AGCTTCTTCTGTTGAACAAA+TGG | 0.420994 | 8_3:-4096520 | Msa1270790:CDS |
| CAAACTCATCGATTAAAGAT+AGG | 0.423296 | 8_3:-4098999 | Msa1270790:CDS |
| AAGTCTAAATTCATTTAGAA+AGG | 0.432222 | 8_3:-4099175 | Msa1270790:CDS |
| CTTGTATATAAGCCAATCAT+TGG | 0.432861 | 8_3:-4096747 | Msa1270790:CDS |
| AACCATTGGTTTGGTGGTGG+TGG | 0.433826 | 8_3:+4096798 | None:intergenic |
| ATAAGTCCTACGACATCGTC+AGG | 0.442802 | 8_3:+4098655 | None:intergenic |
| AGGGAGCAAAGATGTTGCTT+TGG | 0.442973 | 8_3:-4096652 | Msa1270790:CDS |
| CAATTGTGGTAATGATGAAC+CGG | 0.446932 | 8_3:+4096584 | None:intergenic |
| AACTGAAATCAGCACAATAT+GGG | 0.453932 | 8_3:-4099128 | Msa1270790:CDS |
| TAGAGTGTGGGAAAAGGAAT+AGG | 0.454158 | 8_3:-4100349 | Msa1270790:CDS |
| ACAGGAACTAACCATTGGTT+TGG | 0.456496 | 8_3:+4096789 | None:intergenic |
| ATCTGAGTGGACATGTTAGA+TGG | 0.457018 | 8_3:+4096429 | None:intergenic |
| TTGCTTATATTGTTGACAAA+AGG | 0.457324 | 8_3:+4096930 | None:intergenic |
| TGTTCTGGTGAGTTAGAAAT+CGG | 0.463956 | 8_3:-4098790 | Msa1270790:CDS |
| CAGGTGCAAAGATTAATTGC+TGG | 0.467595 | 8_3:-4097143 | Msa1270790:CDS |
| TCATCACTCGAGTCGCGATC+TGG | 0.473501 | 8_3:+4096258 | None:intergenic |
| TGAACTTCCTTTGTTTCCGT+TGG | 0.475130 | 8_3:-4096301 | Msa1270790:CDS |
| GGAACTAACCATTGGTTTGG+TGG | 0.475844 | 8_3:+4096792 | None:intergenic |
| CTCAGAATGTAGATTTGGTA+TGG | 0.477158 | 8_3:-4098686 | Msa1270790:CDS |
| AGATAAGTCCAATGTTTCCT+AGG | 0.478791 | 8_3:-4100298 | Msa1270790:CDS |
| ATTGGTTTGGTGGTGGTGGA+GGG | 0.489254 | 8_3:+4096802 | None:intergenic |
| GGAAAAGGAATAGGATGAAA+GGG | 0.500824 | 8_3:-4100340 | Msa1270790:CDS |
| GGACCATGCCCTCCAAATGC+TGG | 0.503398 | 8_3:-4096726 | Msa1270790:CDS |
| CACTCAGATAAGTCATGTAA+TGG | 0.505804 | 8_3:-4096415 | Msa1270790:CDS |
| TCAAATCAATACAAGAAGAA+AGG | 0.508378 | 8_3:-4096155 | Msa1270790:CDS |
| GACCAAAACGTCGGTGCCAA+CGG | 0.510563 | 8_3:+4096285 | None:intergenic |
| GCTTGGAGAGTGTTTGGCAT+TGG | 0.511051 | 8_3:+4096833 | None:intergenic |
| CCGCCAGCATTTGGAGGGCA+TGG | 0.511195 | 8_3:+4096723 | None:intergenic |
| AGTTGATAGAGTGTGGGAAA+AGG | 0.515998 | 8_3:-4100355 | Msa1270790:CDS |
| ATGAAAGGGGCAATTGATGA+GGG | 0.519543 | 8_3:-4100326 | Msa1270790:CDS |
| AAACCATTTAATGAGTGAAG+AGG | 0.525892 | 8_3:+4099045 | None:intergenic |
| CATGTTAAAGATGCAGAGAA+AGG | 0.525917 | 8_3:-4100272 | Msa1270790:CDS |
| GTCATGACTCGCCATCAACT+TGG | 0.526256 | 8_3:+4099395 | None:intergenic |
| GATGTTGAAAACAATGCAGT+TGG | 0.526264 | 8_3:-4096966 | Msa1270790:CDS |
| CCTTCAGATGGAGACATGAC+AGG | 0.527768 | 8_3:+4096771 | None:intergenic |
| AGATAGAACAGAAGATGCAT+TGG | 0.527977 | 8_3:+4099458 | None:intergenic |
| GTCAGATTGTAACTTATTGG+AGG | 0.529126 | 8_3:+4097058 | None:intergenic |
| ACACCGTTATACGGCGGTTG+CGG | 0.531143 | 8_3:-4096693 | Msa1270790:CDS |
| AGGGGCAATTGATGAGGGAA+AGG | 0.532495 | 8_3:-4100321 | Msa1270790:CDS |
| GGTGGAGGGTAGACAATGCT+TGG | 0.536767 | 8_3:+4096816 | None:intergenic |
| GGACCGCAACCGCCGTATAA+CGG | 0.538073 | 8_3:+4096690 | None:intergenic |
| ACATGCAACCTAGGAAACAT+TGG | 0.538119 | 8_3:+4100290 | None:intergenic |
| GTCGGTGCCAACGGAAACAA+AGG | 0.540047 | 8_3:+4096294 | None:intergenic |
| GTCCAATGAGCTTCAATCAA+GGG | 0.540098 | 8_3:-4096671 | Msa1270790:CDS |
| ATGATGCCGCCAGCATTTGG+AGG | 0.540356 | 8_3:+4096717 | None:intergenic |
| TGAAAACTTGTAGTAAGAGA+TGG | 0.542446 | 8_3:+4096627 | None:intergenic |
| CCTGTCATGTCTCCATCTGA+AGG | 0.543651 | 8_3:-4096771 | Msa1270790:CDS |
| CCTCACATGGCAAGAGAGAG+AGG | 0.543818 | 8_3:-4098759 | Msa1270790:CDS |
| CTCACATGGCTTGATGTTGT+AGG | 0.545092 | 8_3:+4100125 | None:intergenic |
| ACTGTGTTGCAGCTTGGTTG+TGG | 0.548312 | 8_3:-4099504 | Msa1270790:intron |
| GGTCCAATGAGCTTCAATCA+AGG | 0.550030 | 8_3:-4096672 | Msa1270790:CDS |
| ACCAAATCTACATTCTGAGC+TGG | 0.550325 | 8_3:+4098690 | None:intergenic |
| GAGAGAGAGGAGTAAAGATG+AGG | 0.552298 | 8_3:-4098746 | Msa1270790:CDS |
| TTATATTGTTGACAAAAGGA+AGG | 0.553495 | 8_3:+4096934 | None:intergenic |
| ATAGATCTATGCATGAATGA+TGG | 0.554260 | 8_3:+4096546 | None:intergenic |
| AGATTGTAACTTATTGGAGG+AGG | 0.555000 | 8_3:+4097061 | None:intergenic |
| TAAAGAACAAATATCGCTGA+AGG | 0.556742 | 8_3:-4098959 | Msa1270790:CDS |
| TTTATGAGTTGATAGAGTGT+GGG | 0.556933 | 8_3:-4100361 | None:intergenic |
| TTCAACATCCTCGGAAGTAG+TGG | 0.557898 | 8_3:+4096980 | None:intergenic |
| GAACTGTACAATTTCTTAGA+GGG | 0.558318 | 8_3:+4100147 | None:intergenic |
| TATATTGTTGACAAAAGGAA+GGG | 0.559969 | 8_3:+4096935 | None:intergenic |
| GCATCTTTAACATGCAACCT+AGG | 0.561825 | 8_3:+4100281 | None:intergenic |
| TGGACATGTTAGATGGACTT+TGG | 0.571560 | 8_3:+4096436 | None:intergenic |
| GATGAAAGGGGCAATTGATG+AGG | 0.571714 | 8_3:-4100327 | Msa1270790:CDS |
| GATAGCTTGAAAACATTGCA+AGG | 0.578106 | 8_3:-4098913 | Msa1270790:CDS |
| CCTCTCTCTCTTGCCATGTG+AGG | 0.581603 | 8_3:+4098759 | None:intergenic |
| AAAACATTGCAAGGTAGCAA+TGG | 0.584093 | 8_3:-4098904 | Msa1270790:CDS |
| CTCCACCACCACCAAACCAA+TGG | 0.587899 | 8_3:-4096800 | Msa1270790:CDS |
| ACTAACCATTGGTTTGGTGG+TGG | 0.588211 | 8_3:+4096795 | None:intergenic |
| ACATGACAGGAACTAACCAT+TGG | 0.588830 | 8_3:+4096784 | None:intergenic |
| GGGAAAAGGAATAGGATGAA+AGG | 0.589801 | 8_3:-4100341 | Msa1270790:CDS |
| GTGAGTTAGAAATCGGTACA+AGG | 0.592224 | 8_3:-4098783 | Msa1270790:CDS |
| AGAAAGGTGATGAACTCACC+TGG | 0.605551 | 8_3:-4099159 | Msa1270790:CDS |
| CGACTCGAGTGATGAACACC+AGG | 0.605591 | 8_3:-4096250 | Msa1270790:CDS |
| CAATTTAAGGGATCACTGCA+TGG | 0.610874 | 8_3:-4098842 | Msa1270790:CDS |
| TGATGCCGCCAGCATTTGGA+GGG | 0.615550 | 8_3:+4096718 | None:intergenic |
| TTATCTTCAAACAATAGATG+TGG | 0.620025 | 8_3:+4097116 | None:intergenic |
| GAGGACCAAAAGCACCTCCA+AGG | 0.620299 | 8_3:-4100250 | Msa1270790:CDS |
| TAAGTCCTACGACATCGTCA+GGG | 0.620829 | 8_3:+4098656 | None:intergenic |
| GATGATGCAAAACTTTGTGA+AGG | 0.622948 | 8_3:+4100194 | None:intergenic |
| ACTCGACAGCAAGTCCGAGA+AGG | 0.633266 | 8_3:-4097003 | Msa1270790:CDS |
| ATTAAATGGTTTCGATGACA+CGG | 0.641685 | 8_3:-4099034 | Msa1270790:CDS |
| GTTAAAGATGCAGAGAAAGG+AGG | 0.642654 | 8_3:-4100269 | Msa1270790:CDS |
| GTGGTAATGATGAACCGGAA+AGG | 0.644906 | 8_3:+4096589 | None:intergenic |
| CGAGAAGGCCACTACTTCCG+AGG | 0.650322 | 8_3:-4096988 | Msa1270790:CDS |
| ATCGGTACAAGGTCCTCACA+TGG | 0.650514 | 8_3:-4098772 | Msa1270790:CDS |
| TATCTGCAGAGGCTAATGCA+AGG | 0.651421 | 8_3:+4096862 | None:intergenic |
| TTATATACAAGACCTTCAGA+TGG | 0.655581 | 8_3:+4096759 | None:intergenic |
| CCATGCCCTCCAAATGCTGG+CGG | 0.659409 | 8_3:-4096723 | Msa1270790:CDS |
| ACACATGGTGGTAACAATTG+TGG | 0.665840 | 8_3:+4096570 | None:intergenic |
| ATGATGCAAAACTTTGTGAA+GGG | 0.667865 | 8_3:+4100195 | None:intergenic |
| TGACTTAGAGCACATGACAC+CGG | 0.669331 | 8_3:-4099376 | Msa1270790:CDS |
| GAAAAGGAATAGGATGAAAG+GGG | 0.670384 | 8_3:-4100339 | Msa1270790:CDS |
| AAGTCCTACGACATCGTCAG+GGG | 0.680617 | 8_3:+4098657 | None:intergenic |
| TGCATGAATGATGGAACACA+TGG | 0.718592 | 8_3:+4096555 | None:intergenic |
| ATGAATGATGGAACACATGG+TGG | 0.732037 | 8_3:+4096558 | None:intergenic |
| CATTACATGACTTATCTGAG+TGG | 0.751211 | 8_3:+4096416 | None:intergenic |
| TCTGGTGATGACCAAAACGT+CGG | 0.752940 | 8_3:+4096276 | None:intergenic |
| ATCATGACACCGTTATACGG+CGG | 0.764220 | 8_3:-4096699 | Msa1270790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCAATGTATATTTGTT+CGG | - | chr8_3:4096551-4096570 | Msa1270790:CDS | 15.0% |
| !! | TATAAACATCATAACTAAAA+TGG | + | chr8_3:4096976-4096995 | None:intergenic | 15.0% |
| !!! | ACTTTCGTATATAGAATTTT+CGG | - | chr8_3:4096470-4096489 | Msa1270790:CDS | 20.0% |
| !! | TTGTTCTAACAATATTTGTA+TGG | - | chr8_3:4096838-4096857 | Msa1270790:CDS | 20.0% |
| !!! | GTTAATCTTTCTAGAATTAT+AGG | + | chr8_3:4097080-4097099 | None:intergenic | 20.0% |
| !!! | TAAATAATCGTGTTGAATTT+TGG | + | chr8_3:4097161-4097180 | None:intergenic | 20.0% |
| !! | AAGTCTAAATTCATTTAGAA+AGG | - | chr8_3:4097324-4097343 | Msa1270790:intron | 20.0% |
| !!! | TTATAGGTGAAAAACAATTT+TGG | - | chr8_3:4097863-4097882 | Msa1270790:intron | 20.0% |
| !!! | TTTTTCTCAATAGTTTTTCT+AGG | + | chr8_3:4098725-4098744 | None:intergenic | 20.0% |
| !!! | AGATTTTTTTGTAAGTTTTG+CGG | - | chr8_3:4098927-4098946 | Msa1270790:CDS | 20.0% |
| !! | GTCTATTAACATATAGTATA+AGG | + | chr8_3:4099274-4099293 | None:intergenic | 20.0% |
| !! | AATAATCAGCTTTCAAATTA+TGG | - | chr8_3:4099596-4099615 | Msa1270790:intron | 20.0% |
| !!! | TTGTATTGATTTGAATATCT+TGG | + | chr8_3:4100338-4100357 | None:intergenic | 20.0% |
| ! | CATACTTATGGTACAAAAAT+TGG | + | chr8_3:4096433-4096452 | None:intergenic | 25.0% |
| ! | GGTTCAAAAGTAAAAAGATA+CGG | + | chr8_3:4096811-4096830 | None:intergenic | 25.0% |
| !!! | TATCTTTTTACTTTTGAACC+AGG | - | chr8_3:4096811-4096830 | Msa1270790:CDS | 25.0% |
| !!! | ATCTTTTTACTTTTGAACCA+GGG | - | chr8_3:4096812-4096831 | Msa1270790:CDS | 25.0% |
| ! | ATAATTCAAACAATGACACT+TGG | - | chr8_3:4096897-4096916 | Msa1270790:CDS | 25.0% |
| ! | ACTACTTAACCTTTATCATT+TGG | - | chr8_3:4096928-4096947 | Msa1270790:CDS | 25.0% |
| !!! | ATTTTGGTAATTTGTTTTGC+CGG | + | chr8_3:4097145-4097164 | None:intergenic | 25.0% |
| ! | ATAGTGCAGATAAATAAGAT+AGG | + | chr8_3:4098027-4098046 | None:intergenic | 25.0% |
| ! | ATCTTCTTTATTATGTGCAT+AGG | - | chr8_3:4098045-4098064 | Msa1270790:intron | 25.0% |
| ! | GCAAAACATTTCTAACTTAA+AGG | - | chr8_3:4098247-4098266 | Msa1270790:intron | 25.0% |
| ! | AAATCTAGAGATTAATGAGT+TGG | - | chr8_3:4098742-4098761 | Msa1270790:CDS | 25.0% |
| ! | TTCATGTACCAATTAATCTT+TGG | + | chr8_3:4098957-4098976 | None:intergenic | 25.0% |
| ! | ATCTAGTTAGATTTATGGTT+GGG | + | chr8_3:4099045-4099064 | None:intergenic | 25.0% |
| !!! | TTTGTATTTTGCTACTTACA+TGG | - | chr8_3:4099165-4099184 | Msa1270790:CDS | 25.0% |
| ! | TTATCTTCAAACAATAGATG+TGG | + | chr8_3:4099386-4099405 | None:intergenic | 25.0% |
| ! | AAAGTCAGATTGTAACTTAT+TGG | + | chr8_3:4099447-4099466 | None:intergenic | 25.0% |
| ! | TATATTGTTGACAAAAGGAA+GGG | + | chr8_3:4099567-4099586 | None:intergenic | 25.0% |
| ! | TTATATTGTTGACAAAAGGA+AGG | + | chr8_3:4099568-4099587 | None:intergenic | 25.0% |
| ! | TTGCTTATATTGTTGACAAA+AGG | + | chr8_3:4099572-4099591 | None:intergenic | 25.0% |
| ! | AATTATGGCAATCATCATTT+AGG | - | chr8_3:4099611-4099630 | Msa1270790:intron | 25.0% |
| ! | ATTATGGCAATCATCATTTA+GGG | - | chr8_3:4099612-4099631 | Msa1270790:intron | 25.0% |
| !! | CAAGTTTTCATCAAAAGATT+CGG | - | chr8_3:4099885-4099904 | Msa1270790:intron | 25.0% |
| !! | TTTTTCACCTTATCAATCAT+TGG | - | chr8_3:4100114-4100133 | Msa1270790:intron | 25.0% |
| ! | TTATCTTCCAATGATTGATA+AGG | + | chr8_3:4100124-4100143 | None:intergenic | 25.0% |
| ! | TCAAATCAATACAAGAAGAA+AGG | - | chr8_3:4100344-4100363 | Msa1270790:CDS | 25.0% |
| ATGATGCAAAACTTTGTGAA+GGG | + | chr8_3:4096307-4096326 | None:intergenic | 30.0% | |
| GAACTGTACAATTTCTTAGA+GGG | + | chr8_3:4096355-4096374 | None:intergenic | 30.0% | |
| AGAGATAAGACTCATACTTA+TGG | + | chr8_3:4096445-4096464 | None:intergenic | 30.0% | |
| ! | TCGTATATAGAATTTTCGGT+AGG | - | chr8_3:4096474-4096493 | Msa1270790:CDS | 30.0% |
| TTAACTGTTATGTACCCTTT+GGG | - | chr8_3:4096586-4096605 | Msa1270790:CDS | 30.0% | |
| TATTGTTAGAACAATAACCC+TGG | + | chr8_3:4096832-4096851 | None:intergenic | 30.0% | |
| GAATTATGTCAAAAAAGTCC+TGG | + | chr8_3:4096884-4096903 | None:intergenic | 30.0% | |
| GTAGAATCACCAAATGATAA+AGG | + | chr8_3:4096940-4096959 | None:intergenic | 30.0% | |
| ! | AATTCTCTGAAAACACTTGA+TGG | - | chr8_3:4097196-4097215 | Msa1270790:intron | 30.0% |
| ! | GAAGATGCTTTTATAACTTC+TGG | - | chr8_3:4097220-4097239 | Msa1270790:intron | 30.0% |
| AACTGAAATCAGCACAATAT+GGG | - | chr8_3:4097371-4097390 | Msa1270790:intron | 30.0% | |
| CATCTTTATGCTCTTTCATT+AGG | + | chr8_3:4097402-4097421 | None:intergenic | 30.0% | |
| AAACCTCTTCACTCATTAAA+TGG | - | chr8_3:4097451-4097470 | Msa1270790:intron | 30.0% | |
| AAACCATTTAATGAGTGAAG+AGG | + | chr8_3:4097457-4097476 | None:intergenic | 30.0% | |
| ATTAAATGGTTTCGATGACA+CGG | - | chr8_3:4097465-4097484 | Msa1270790:intron | 30.0% | |
| ATCTTTAATCGATGAGTTTG+AGG | + | chr8_3:4097500-4097519 | None:intergenic | 30.0% | |
| ! | CAAACTCATCGATTAAAGAT+AGG | - | chr8_3:4097500-4097519 | Msa1270790:intron | 30.0% |
| TAAAGAACAAATATCGCTGA+AGG | - | chr8_3:4097540-4097559 | Msa1270790:intron | 30.0% | |
| TTGCGGACAAAATCAATTTA+AGG | - | chr8_3:4097644-4097663 | Msa1270790:intron | 30.0% | |
| TGCGGACAAAATCAATTTAA+GGG | - | chr8_3:4097645-4097664 | Msa1270790:intron | 30.0% | |
| AGTGATTTCCAAAAATGTTC+TGG | - | chr8_3:4097694-4097713 | Msa1270790:intron | 30.0% | |
| ATTATGTGCATAGGACTTAT+AGG | - | chr8_3:4098054-4098073 | Msa1270790:intron | 30.0% | |
| TAAATGGGAGATTATAGACT+TGG | - | chr8_3:4098147-4098166 | Msa1270790:intron | 30.0% | |
| TAGAAGCAAACCAAAGTATA+TGG | - | chr8_3:4098205-4098224 | Msa1270790:intron | 30.0% | |
| AACTTGCATTCCATATACTT+TGG | + | chr8_3:4098218-4098237 | None:intergenic | 30.0% | |
| TCACACATTTCAAATATCCT+AGG | - | chr8_3:4098300-4098319 | Msa1270790:intron | 30.0% | |
| ! | CATTTTGTACTGTTCTACTA+TGG | + | chr8_3:4098327-4098346 | None:intergenic | 30.0% |
| TAGTAGAACAGTACAAAATG+AGG | - | chr8_3:4098327-4098346 | Msa1270790:intron | 30.0% | |
| GTAAACTATTCAATTCAAGC+AGG | - | chr8_3:4098363-4098382 | Msa1270790:intron | 30.0% | |
| !! | ATGCTACTTTATATCACATG+AGG | + | chr8_3:4098409-4098428 | None:intergenic | 30.0% |
| ATTAGAGAGAGAGTAAAAGA+TGG | - | chr8_3:4098590-4098609 | Msa1270790:intron | 30.0% | |
| GACATGTAGATTCTTTAGTA+AGG | - | chr8_3:4098652-4098671 | Msa1270790:CDS | 30.0% | |
| ATGATATACGACAGAACATT+AGG | - | chr8_3:4098773-4098792 | Msa1270790:CDS | 30.0% | |
| ! | TAGTTATCGCAATATCGATT+TGG | + | chr8_3:4098872-4098891 | None:intergenic | 30.0% |
| TTGATATGTCAACATATACG+TGG | + | chr8_3:4098903-4098922 | None:intergenic | 30.0% | |
| GGACTTAAAGTTAGTGTAAT+AGG | + | chr8_3:4099024-4099043 | None:intergenic | 30.0% | |
| GATCTAGTTAGATTTATGGT+TGG | + | chr8_3:4099046-4099065 | None:intergenic | 30.0% | |
| GGATGATCTAGTTAGATTTA+TGG | + | chr8_3:4099050-4099069 | None:intergenic | 30.0% | |
| TGAGTTGCATAGACTTATAA+AGG | - | chr8_3:4099244-4099263 | Msa1270790:CDS | 30.0% | |
| CTAAACCATATCCTAAAAAC+AGG | - | chr8_3:4099337-4099356 | Msa1270790:CDS | 30.0% | |
| !! | TAATCTTTGCACCTGTTTTT+AGG | + | chr8_3:4099351-4099370 | None:intergenic | 30.0% |
| TTATATACAAGACCTTCAGA+TGG | + | chr8_3:4099743-4099762 | None:intergenic | 30.0% | |
| CTTGTATATAAGCCAATCAT+TGG | - | chr8_3:4099752-4099771 | Msa1270790:intron | 30.0% | |
| TGAAAACTTGTAGTAAGAGA+TGG | + | chr8_3:4099875-4099894 | None:intergenic | 30.0% | |
| ATAGATCTATGCATGAATGA+TGG | + | chr8_3:4099956-4099975 | None:intergenic | 30.0% | |
| ! | TTCATCTCTTTTCATTCTCT+TGG | + | chr8_3:4100182-4100201 | None:intergenic | 30.0% |
| GGAAAAGGAATAGGATGAAA+GGG | - | chr8_3:4096159-4096178 | Msa1270790:CDS | 35.0% | |
| GAAAAGGAATAGGATGAAAG+GGG | - | chr8_3:4096160-4096179 | Msa1270790:CDS | 35.0% | |
| AGATAAGTCCAATGTTTCCT+AGG | - | chr8_3:4096201-4096220 | Msa1270790:CDS | 35.0% | |
| CATGTTAAAGATGCAGAGAA+AGG | - | chr8_3:4096227-4096246 | Msa1270790:CDS | 35.0% | |
| !! | TAGAGAGCCATTTTATTCCT+TGG | + | chr8_3:4096269-4096288 | None:intergenic | 35.0% |
| GATGATGCAAAACTTTGTGA+AGG | + | chr8_3:4096308-4096327 | None:intergenic | 35.0% | |
| ! | TCACAAAGTTTTGCATCATC+AGG | - | chr8_3:4096308-4096327 | Msa1270790:CDS | 35.0% |
| GGAACTGTACAATTTCTTAG+AGG | + | chr8_3:4096356-4096375 | None:intergenic | 35.0% | |
| GTTAACTGTTATGTACCCTT+TGG | - | chr8_3:4096585-4096604 | Msa1270790:CDS | 35.0% | |
| ! | TCACAGCCTAACAAACTTTT+GGG | + | chr8_3:4096617-4096636 | None:intergenic | 35.0% |
| CAATATTTGAACACCGAGTT+CGG | + | chr8_3:4096771-4096790 | None:intergenic | 35.0% | |
| AGATAGAACAGAAGATGCAT+TGG | + | chr8_3:4097044-4097063 | None:intergenic | 35.0% | |
| ! | GATTAACTCAACCAAGTTGA+TGG | - | chr8_3:4097093-4097112 | Msa1270790:CDS | 35.0% |
| !! | TTGTGCTGATTTCAGTTCTA+TGG | + | chr8_3:4097368-4097387 | None:intergenic | 35.0% |
| GAACTGAAATCAGCACAATA+TGG | - | chr8_3:4097370-4097389 | Msa1270790:intron | 35.0% | |
| GATAGCTTGAAAACATTGCA+AGG | - | chr8_3:4097586-4097605 | Msa1270790:intron | 35.0% | |
| AAAACATTGCAAGGTAGCAA+TGG | - | chr8_3:4097595-4097614 | Msa1270790:intron | 35.0% | |
| ! | TGAAGAACATGTAGCTTTTG+CGG | - | chr8_3:4097627-4097646 | Msa1270790:intron | 35.0% |
| !! | TTTTGGAAATCACTCATTGC+TGG | + | chr8_3:4097688-4097707 | None:intergenic | 35.0% |
| ! | CTAACTCACCAGAACATTTT+TGG | + | chr8_3:4097705-4097724 | None:intergenic | 35.0% |
| TGTTCTGGTGAGTTAGAAAT+CGG | - | chr8_3:4097709-4097728 | Msa1270790:intron | 35.0% | |
| TTCTGAGCTGGATTTATTCA+AGG | + | chr8_3:4097800-4097819 | None:intergenic | 35.0% | |
| ! | CTCAGAATGTAGATTTGGTA+TGG | - | chr8_3:4097813-4097832 | Msa1270790:intron | 35.0% |
| TGGAATGCAAGTTTAGCAAA+AGG | - | chr8_3:4098225-4098244 | Msa1270790:intron | 35.0% | |
| ! | TATTTGAAATGTGTGACAGG+TGG | + | chr8_3:4098296-4098315 | None:intergenic | 35.0% |
| ! | GGATATTTGAAATGTGTGAC+AGG | + | chr8_3:4098299-4098318 | None:intergenic | 35.0% |
| ACTATTCAATTCAAGCAGGA+TGG | - | chr8_3:4098367-4098386 | Msa1270790:intron | 35.0% | |
| !! | TTGTTGGTCTTACAGTTGTA+CGG | + | chr8_3:4098454-4098473 | None:intergenic | 35.0% |
| GTAAGACCAACAATGTTGTA+CGG | - | chr8_3:4098461-4098480 | Msa1270790:intron | 35.0% | |
| TAAGACCAACAATGTTGTAC+GGG | - | chr8_3:4098462-4098481 | Msa1270790:intron | 35.0% | |
| !! | AGTAAAAGATGGTGGAAACT+CGG | - | chr8_3:4098601-4098620 | Msa1270790:intron | 35.0% |
| GCATAGGTTGTTTGAATATG+TGG | - | chr8_3:4098623-4098642 | Msa1270790:CDS | 35.0% | |
| AAGGAGAGCAGATAACATAA+AGG | - | chr8_3:4098671-4098690 | Msa1270790:CDS | 35.0% | |
| AGGAGAGCAGATAACATAAA+GGG | - | chr8_3:4098672-4098691 | Msa1270790:CDS | 35.0% | |
| AAAGGGTAGTAAATCACTAG+AGG | - | chr8_3:4098689-4098708 | Msa1270790:CDS | 35.0% | |
| ! | GCGGTTTTCCAAAGATTAAT+TGG | - | chr8_3:4098946-4098965 | Msa1270790:CDS | 35.0% |
| GAAATGCAAGACTTCATGTA+AGG | + | chr8_3:4099074-4099093 | None:intergenic | 35.0% | |
| !!! | TTGCACCTGTTTTTAGGATA+TGG | + | chr8_3:4099345-4099364 | None:intergenic | 35.0% |
| AGATTGTAACTTATTGGAGG+AGG | + | chr8_3:4099441-4099460 | None:intergenic | 35.0% | |
| GTCAGATTGTAACTTATTGG+AGG | + | chr8_3:4099444-4099463 | None:intergenic | 35.0% | |
| CTGTCGAGTTTAAAAACTGT+CGG | + | chr8_3:4099485-4099504 | None:intergenic | 35.0% | |
| ! | TGCATTGTTTTCAACATCCT+CGG | + | chr8_3:4099531-4099550 | None:intergenic | 35.0% |
| GATGTTGAAAACAATGCAGT+TGG | - | chr8_3:4099533-4099552 | Msa1270790:intron | 35.0% | |
| ! | ATTGGAACTTTTATCTGCAG+AGG | + | chr8_3:4099651-4099670 | None:intergenic | 35.0% |
| ! | CAATTGTGGTAATGATGAAC+CGG | + | chr8_3:4099918-4099937 | None:intergenic | 35.0% |
| AGCTTCTTCTGTTGAACAAA+TGG | - | chr8_3:4099979-4099998 | Msa1270790:intron | 35.0% | |
| GAACAAATGGCACAATCTAA+TGG | - | chr8_3:4099992-4100011 | Msa1270790:intron | 35.0% | |
| ! | GCAGATGAGTAGTGATTTTT+AGG | + | chr8_3:4100019-4100038 | None:intergenic | 35.0% |
| ! | AGATGGACTTTGGTACAATA+TGG | + | chr8_3:4100056-4100075 | None:intergenic | 35.0% |
| CATTACATGACTTATCTGAG+TGG | + | chr8_3:4100086-4100105 | None:intergenic | 35.0% | |
| CACTCAGATAAGTCATGTAA+TGG | - | chr8_3:4100084-4100103 | Msa1270790:intron | 35.0% | |
| ! | TCTCTTTTCATTCTCTTGGA+TGG | + | chr8_3:4100178-4100197 | None:intergenic | 35.0% |
| !!! | CTTGCTGATTTTGGATTATG+AGG | + | chr8_3:4100304-4100323 | None:intergenic | 35.0% |
| TAGAGTGTGGGAAAAGGAAT+AGG | - | chr8_3:4096150-4096169 | Msa1270790:CDS | 40.0% | |
| GGGAAAAGGAATAGGATGAA+AGG | - | chr8_3:4096158-4096177 | Msa1270790:CDS | 40.0% | |
| ATGAAAGGGGCAATTGATGA+GGG | - | chr8_3:4096173-4096192 | Msa1270790:CDS | 40.0% | |
| ACATGCAACCTAGGAAACAT+TGG | + | chr8_3:4096212-4096231 | None:intergenic | 40.0% | |
| GCATCTTTAACATGCAACCT+AGG | + | chr8_3:4096221-4096240 | None:intergenic | 40.0% | |
| GTTAAAGATGCAGAGAAAGG+AGG | - | chr8_3:4096230-4096249 | Msa1270790:CDS | 40.0% | |
| !!! | TTATTCCTTGGAGGTGCTTT+TGG | + | chr8_3:4096257-4096276 | None:intergenic | 40.0% |
| AGCACCTCCAAGGAATAAAA+TGG | - | chr8_3:4096259-4096278 | Msa1270790:CDS | 40.0% | |
| !! | AGAGCCATTTTATTCCTTGG+AGG | + | chr8_3:4096266-4096285 | None:intergenic | 40.0% |
| ! | AGTTTTGCATCATCAGGATC+AGG | - | chr8_3:4096314-4096333 | Msa1270790:CDS | 40.0% |
| GAACTACTACATGACTCACA+TGG | + | chr8_3:4096391-4096410 | None:intergenic | 40.0% | |
| !! | GTAGGAGTATCAAGCTTGAT+AGG | - | chr8_3:4096492-4096511 | Msa1270790:CDS | 40.0% |
| ! | GCTTGTCCCAAAAGTTTGTT+AGG | - | chr8_3:4096608-4096627 | Msa1270790:CDS | 40.0% |
| ! | GTCACAGCCTAACAAACTTT+TGG | + | chr8_3:4096618-4096637 | None:intergenic | 40.0% |
| AACTCTTGTGAGAATCAACC+AGG | - | chr8_3:4096863-4096882 | Msa1270790:CDS | 40.0% | |
| GTTTATACTGTGTTGCAGCT+TGG | - | chr8_3:4096989-4097008 | Msa1270790:CDS | 40.0% | |
| GATTTCAGTTCTATGGTTCC+AGG | + | chr8_3:4097361-4097380 | None:intergenic | 40.0% | |
| CAATTTAAGGGATCACTGCA+TGG | - | chr8_3:4097657-4097676 | Msa1270790:intron | 40.0% | |
| GTGAGTTAGAAATCGGTACA+AGG | - | chr8_3:4097716-4097735 | Msa1270790:intron | 40.0% | |
| TCCAGCTCAGAATGTAGATT+TGG | - | chr8_3:4097808-4097827 | Msa1270790:intron | 40.0% | |
| ACCAAATCTACATTCTGAGC+TGG | + | chr8_3:4097812-4097831 | None:intergenic | 40.0% | |
| AGTTGAGGGAGGAACTAAAT+GGG | - | chr8_3:4098132-4098151 | Msa1270790:intron | 40.0% | |
| AGACAATTCTTAGACGCGTA+TGG | - | chr8_3:4098170-4098189 | Msa1270790:intron | 40.0% | |
| TACTGTTCTACTATGGACCT+AGG | + | chr8_3:4098320-4098339 | None:intergenic | 40.0% | |
| TTCAATTCAAGCAGGATGGT+AGG | - | chr8_3:4098371-4098390 | Msa1270790:intron | 40.0% | |
| ! | TATCACATGAGGCACTTCTT+TGG | + | chr8_3:4098398-4098417 | None:intergenic | 40.0% |
| ! | GCTACGCTTTATTCTCATGT+TGG | + | chr8_3:4098511-4098530 | None:intergenic | 40.0% |
| CAGTGATGAGATTGTTGTGT+TGG | - | chr8_3:4098530-4098549 | Msa1270790:intron | 40.0% | |
| AGATTGTTGTGTTGGATGTG+TGG | - | chr8_3:4098538-4098557 | Msa1270790:intron | 40.0% | |
| ! | GATGTGTGGACTATCAAGAT+AGG | - | chr8_3:4098552-4098571 | Msa1270790:intron | 40.0% |
| AGAGAGAGAGTAAAAGATGG+TGG | - | chr8_3:4098593-4098612 | Msa1270790:intron | 40.0% | |
| TCTCGTTTGATCCATGTAAC+CGG | - | chr8_3:4098797-4098816 | Msa1270790:CDS | 40.0% | |
| ATGCAAGACTTCATGTAAGG+AGG | + | chr8_3:4099071-4099090 | None:intergenic | 40.0% | |
| GAAGAAGATTCTCTGTTGAC+TGG | + | chr8_3:4099213-4099232 | None:intergenic | 40.0% | |
| CAGGTGCAAAGATTAATTGC+TGG | - | chr8_3:4099356-4099375 | Msa1270790:CDS | 40.0% | |
| ! | TTGGAGGAGGATGTTTCTAT+TGG | + | chr8_3:4099428-4099447 | None:intergenic | 40.0% |
| TCGAGTTTAAAAACTGTCGG+CGG | + | chr8_3:4099482-4099501 | None:intergenic | 40.0% | |
| ! | ACAGGAACTAACCATTGGTT+TGG | + | chr8_3:4099713-4099732 | None:intergenic | 40.0% |
| ACATGACAGGAACTAACCAT+TGG | + | chr8_3:4099718-4099737 | None:intergenic | 40.0% | |
| GTCCAATGAGCTTCAATCAA+GGG | - | chr8_3:4099828-4099847 | Msa1270790:intron | 40.0% | |
| ACACATGGTGGTAACAATTG+TGG | + | chr8_3:4099932-4099951 | None:intergenic | 40.0% | |
| ! | ATGAATGATGGAACACATGG+TGG | + | chr8_3:4099944-4099963 | None:intergenic | 40.0% |
| ! | TGCATGAATGATGGAACACA+TGG | + | chr8_3:4099947-4099966 | None:intergenic | 40.0% |
| ! | TGGACATGTTAGATGGACTT+TGG | + | chr8_3:4100066-4100085 | None:intergenic | 40.0% |
| ATCTGAGTGGACATGTTAGA+TGG | + | chr8_3:4100073-4100092 | None:intergenic | 40.0% | |
| ! | TGAACTTCCTTTGTTTCCGT+TGG | - | chr8_3:4100198-4100217 | Msa1270790:CDS | 40.0% |
| TTACTCTTGAGTGATGTTCC+TGG | + | chr8_3:4100270-4100289 | None:intergenic | 40.0% | |
| GATGAAAGGGGCAATTGATG+AGG | - | chr8_3:4096172-4096191 | Msa1270790:CDS | 45.0% | |
| CTCACATGGCTTGATGTTGT+AGG | + | chr8_3:4096377-4096396 | None:intergenic | 45.0% | |
| !!! | ACTTTTGGGACAAGCCCAAA+GGG | + | chr8_3:4096603-4096622 | None:intergenic | 45.0% |
| !!! | AACTTTTGGGACAAGCCCAA+AGG | + | chr8_3:4096604-4096623 | None:intergenic | 45.0% |
| AGTACCTCATAATCGTACCG+CGG | + | chr8_3:4096651-4096670 | None:intergenic | 45.0% | |
| GTCGGACACATAAGCACAAT+TGG | - | chr8_3:4096745-4096764 | Msa1270790:CDS | 45.0% | |
| TAAGCACAATTGGCCGAACT+CGG | - | chr8_3:4096755-4096774 | Msa1270790:CDS | 45.0% | |
| TGACTTAGAGCACATGACAC+CGG | - | chr8_3:4097123-4097142 | Msa1270790:CDS | 45.0% | |
| AGAAAGGTGATGAACTCACC+TGG | - | chr8_3:4097340-4097359 | Msa1270790:intron | 45.0% | |
| GAGAGAGAGGAGTAAAGATG+AGG | - | chr8_3:4097753-4097772 | Msa1270790:intron | 45.0% | |
| TAAGTCCTACGACATCGTCA+GGG | + | chr8_3:4097846-4097865 | None:intergenic | 45.0% | |
| ATAAGTCCTACGACATCGTC+AGG | + | chr8_3:4097847-4097866 | None:intergenic | 45.0% | |
| GACGATGTCGTAGGACTTAT+AGG | - | chr8_3:4097847-4097866 | Msa1270790:intron | 45.0% | |
| CACTGCTTTGGTACATGAAC+TGG | + | chr8_3:4098086-4098105 | None:intergenic | 45.0% | |
| CTTAAGCAGAGTCACTGCTT+TGG | + | chr8_3:4098098-4098117 | None:intergenic | 45.0% | |
| CTCTGCTTAAGTGTCCTACT+TGG | - | chr8_3:4098107-4098126 | Msa1270790:intron | 45.0% | |
| TGTCCTACTTGGAGAGTTGA+GGG | - | chr8_3:4098118-4098137 | Msa1270790:intron | 45.0% | |
| GAGTTGAGGGAGGAACTAAA+TGG | - | chr8_3:4098131-4098150 | Msa1270790:intron | 45.0% | |
| !! | ACTTTGGTTTGCTTCTACGC+AGG | + | chr8_3:4098202-4098221 | None:intergenic | 45.0% |
| ACCAACAATGTTGTACGGGA+TGG | - | chr8_3:4098466-4098485 | Msa1270790:intron | 45.0% | |
| TCCATCCCGTACAACATTGT+TGG | + | chr8_3:4098470-4098489 | None:intergenic | 45.0% | |
| ACTAAGTAGGACCGGTTACA+TGG | + | chr8_3:4098811-4098830 | None:intergenic | 45.0% | |
| ATGTAACCGGTCCTACTTAG+TGG | - | chr8_3:4098810-4098829 | Msa1270790:CDS | 45.0% | |
| TGTAACCGGTCCTACTTAGT+GGG | - | chr8_3:4098811-4098830 | Msa1270790:CDS | 45.0% | |
| CTTATCCCACTAAGTAGGAC+CGG | + | chr8_3:4098819-4098838 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+AGG | + | chr8_3:4098824-4098843 | None:intergenic | 45.0% |
| ! | GAGGAGGATGTTTCTATTGG+TGG | + | chr8_3:4099425-4099444 | None:intergenic | 45.0% |
| TTCAACATCCTCGGAAGTAG+TGG | + | chr8_3:4099522-4099541 | None:intergenic | 45.0% | |
| TATCTGCAGAGGCTAATGCA+AGG | + | chr8_3:4099640-4099659 | None:intergenic | 45.0% | |
| !! | GACAATGCTTGGAGAGTGTT+TGG | + | chr8_3:4099675-4099694 | None:intergenic | 45.0% |
| !! | ACTAACCATTGGTTTGGTGG+TGG | + | chr8_3:4099707-4099726 | None:intergenic | 45.0% |
| !! | GGAACTAACCATTGGTTTGG+TGG | + | chr8_3:4099710-4099729 | None:intergenic | 45.0% |
| GGCATCATGACACCGTTATA+CGG | - | chr8_3:4099797-4099816 | Msa1270790:intron | 45.0% | |
| ATCATGACACCGTTATACGG+CGG | - | chr8_3:4099800-4099819 | Msa1270790:intron | 45.0% | |
| GGTCCAATGAGCTTCAATCA+AGG | - | chr8_3:4099827-4099846 | Msa1270790:intron | 45.0% | |
| CTCCCTTGATTGAAGCTCAT+TGG | + | chr8_3:4099833-4099852 | None:intergenic | 45.0% | |
| ! | AGGGAGCAAAGATGTTGCTT+TGG | - | chr8_3:4099847-4099866 | Msa1270790:intron | 45.0% |
| CAAAAGATTCGGCTCCTTTC+CGG | - | chr8_3:4099896-4099915 | Msa1270790:intron | 45.0% | |
| ! | GTGGTAATGATGAACCGGAA+AGG | + | chr8_3:4099913-4099932 | None:intergenic | 45.0% |
| ! | TCTGGTGATGACCAAAACGT+CGG | + | chr8_3:4100226-4100245 | None:intergenic | 45.0% |
| !!! | GCTGACTCACTTGCTGATTT+TGG | + | chr8_3:4100313-4100332 | None:intergenic | 45.0% |
| AGGGGCAATTGATGAGGGAA+AGG | - | chr8_3:4096178-4096197 | Msa1270790:CDS | 50.0% | |
| TACCTCATAATCGTACCGCG+GGG | + | chr8_3:4096649-4096668 | None:intergenic | 50.0% | |
| GTACCTCATAATCGTACCGC+GGG | + | chr8_3:4096650-4096669 | None:intergenic | 50.0% | |
| ACCTAATAGCACCCTGCAGT+CGG | - | chr8_3:4096727-4096746 | Msa1270790:CDS | 50.0% | |
| TGCTTATGTGTCCGACTGCA+GGG | + | chr8_3:4096741-4096760 | None:intergenic | 50.0% | |
| ACTGTGTTGCAGCTTGGTTG+TGG | - | chr8_3:4096995-4097014 | Msa1270790:CDS | 50.0% | |
| GTCATGACTCGCCATCAACT+TGG | + | chr8_3:4097107-4097126 | None:intergenic | 50.0% | |
| ATCGGTACAAGGTCCTCACA+TGG | - | chr8_3:4097727-4097746 | Msa1270790:intron | 50.0% | |
| AAGTCCTACGACATCGTCAG+GGG | + | chr8_3:4097845-4097864 | None:intergenic | 50.0% | |
| GTGTCCTACTTGGAGAGTTG+AGG | - | chr8_3:4098117-4098136 | Msa1270790:intron | 50.0% | |
| !! | TTGGTTTGCTTCTACGCAGG+CGG | + | chr8_3:4098199-4098218 | None:intergenic | 50.0% |
| GTGTGACAGGTGGTATGACA+TGG | + | chr8_3:4098286-4098305 | None:intergenic | 50.0% | |
| !! | AGATGGTGGAAACTCGGCAT+AGG | - | chr8_3:4098607-4098626 | Msa1270790:intron | 50.0% |
| CGGTCCTACTTAGTGGGATA+AGG | - | chr8_3:4098817-4098836 | Msa1270790:CDS | 50.0% | |
| !! | GCTTGGAGAGTGTTTGGCAT+TGG | + | chr8_3:4099669-4099688 | None:intergenic | 50.0% |
| !! | ATTGGTTTGGTGGTGGTGGA+GGG | + | chr8_3:4099700-4099719 | None:intergenic | 50.0% |
| !! | AACCATTGGTTTGGTGGTGG+TGG | + | chr8_3:4099704-4099723 | None:intergenic | 50.0% |
| CCTTCAGATGGAGACATGAC+AGG | + | chr8_3:4099731-4099750 | None:intergenic | 50.0% | |
| CCTGTCATGTCTCCATCTGA+AGG | - | chr8_3:4099728-4099747 | Msa1270790:intron | 50.0% | |
| !! | GAGGACCAAAAGCACCTCCA+AGG | - | chr8_3:4096249-4096268 | Msa1270790:CDS | 55.0% |
| CTGTGACTATTTGTCCCCCG+CGG | - | chr8_3:4096631-4096650 | Msa1270790:CDS | 55.0% | |
| ACCTCATAATCGTACCGCGG+GGG | + | chr8_3:4096648-4096667 | None:intergenic | 55.0% | |
| !! | TCCGACTGCAGGGTGCTATT+AGG | + | chr8_3:4096731-4096750 | None:intergenic | 55.0% |
| GTGCTTATGTGTCCGACTGC+AGG | + | chr8_3:4096742-4096761 | None:intergenic | 55.0% | |
| CCTCTCTCTCTTGCCATGTG+AGG | + | chr8_3:4097743-4097762 | None:intergenic | 55.0% | |
| CCTCACATGGCAAGAGAGAG+AGG | - | chr8_3:4097740-4097759 | Msa1270790:intron | 55.0% | |
| ATCTCCCCTGACGATGTCGT+AGG | - | chr8_3:4097838-4097857 | Msa1270790:intron | 55.0% | |
| CCTCCCTCAACTCTCCAAGT+AGG | + | chr8_3:4098124-4098143 | None:intergenic | 55.0% | |
| CCTACTTGGAGAGTTGAGGG+AGG | - | chr8_3:4098121-4098140 | Msa1270790:intron | 55.0% | |
| ACTCGACAGCAAGTCCGAGA+AGG | - | chr8_3:4099496-4099515 | Msa1270790:intron | 55.0% | |
| CTCGGAAGTAGTGGCCTTCT+CGG | + | chr8_3:4099513-4099532 | None:intergenic | 55.0% | |
| GGTGGAGGGTAGACAATGCT+TGG | + | chr8_3:4099686-4099705 | None:intergenic | 55.0% | |
| !! | CATTGGTTTGGTGGTGGTGG+AGG | + | chr8_3:4099701-4099720 | None:intergenic | 55.0% |
| CTCCACCACCACCAAACCAA+TGG | - | chr8_3:4099699-4099718 | Msa1270790:intron | 55.0% | |
| ! | GGAGGGCATGGTCCAATGAT+TGG | + | chr8_3:4099767-4099786 | None:intergenic | 55.0% |
| TGATGCCGCCAGCATTTGGA+GGG | + | chr8_3:4099784-4099803 | None:intergenic | 55.0% | |
| ATGATGCCGCCAGCATTTGG+AGG | + | chr8_3:4099785-4099804 | None:intergenic | 55.0% | |
| GTCATGATGCCGCCAGCATT+TGG | + | chr8_3:4099788-4099807 | None:intergenic | 55.0% | |
| ACACCGTTATACGGCGGTTG+CGG | - | chr8_3:4099806-4099825 | Msa1270790:intron | 55.0% | |
| !! | GTCGGTGCCAACGGAAACAA+AGG | + | chr8_3:4100208-4100227 | None:intergenic | 55.0% |
| !!! | TTCCGTTGGCACCGACGTTT+TGG | - | chr8_3:4100212-4100231 | Msa1270790:CDS | 55.0% |
| !! | GACCAAAACGTCGGTGCCAA+CGG | + | chr8_3:4100217-4100236 | None:intergenic | 55.0% |
| TCATCACTCGAGTCGCGATC+TGG | + | chr8_3:4100244-4100263 | None:intergenic | 55.0% | |
| CGACTCGAGTGATGAACACC+AGG | - | chr8_3:4100249-4100268 | Msa1270790:CDS | 55.0% | |
| TCCCCCGCGGTACGATTATG+AGG | - | chr8_3:4096644-4096663 | Msa1270790:CDS | 60.0% | |
| !! | GTACGGGATGGAGTGTTGCG+CGG | - | chr8_3:4098478-4098497 | Msa1270790:intron | 60.0% |
| CGAGAAGGCCACTACTTCCG+AGG | - | chr8_3:4099511-4099530 | Msa1270790:intron | 60.0% | |
| GGACCATGCCCTCCAAATGC+TGG | - | chr8_3:4099773-4099792 | Msa1270790:intron | 60.0% | |
| CCATGCCCTCCAAATGCTGG+CGG | - | chr8_3:4099776-4099795 | Msa1270790:intron | 60.0% | |
| GGACCGCAACCGCCGTATAA+CGG | + | chr8_3:4099812-4099831 | None:intergenic | 60.0% | |
| CCGCCAGCATTTGGAGGGCA+TGG | + | chr8_3:4099779-4099798 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 4096146 | 4100375 | 4096146 | ID=Msa1270790;Name=Msa1270790 |
| chr8_3 | mRNA | 4096146 | 4100375 | 4096146 | ID=Msa1270790-mRNA-1;Parent=Msa1270790;Name=Msa1270790-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.66|0.25|1|1|1|4|0|738 |
| chr8_3 | exon | 4100130 | 4100375 | 4100130 | ID=Msa1270790-mRNA-1:exon:1403;Parent=Msa1270790-mRNA-1 |
| chr8_3 | exon | 4098613 | 4099514 | 4098613 | ID=Msa1270790-mRNA-1:exon:1402;Parent=Msa1270790-mRNA-1 |
| chr8_3 | exon | 4097256 | 4097307 | 4097256 | ID=Msa1270790-mRNA-1:exon:1401;Parent=Msa1270790-mRNA-1 |
| chr8_3 | exon | 4096146 | 4097162 | 4096146 | ID=Msa1270790-mRNA-1:exon:1400;Parent=Msa1270790-mRNA-1 |
| chr8_3 | CDS | 4100130 | 4100375 | 4100130 | ID=Msa1270790-mRNA-1:cds;Parent=Msa1270790-mRNA-1 |
| chr8_3 | CDS | 4098613 | 4099514 | 4098613 | ID=Msa1270790-mRNA-1:cds;Parent=Msa1270790-mRNA-1 |
| chr8_3 | CDS | 4097256 | 4097307 | 4097256 | ID=Msa1270790-mRNA-1:cds;Parent=Msa1270790-mRNA-1 |
| chr8_3 | CDS | 4096146 | 4097162 | 4096146 | ID=Msa1270790-mRNA-1:cds;Parent=Msa1270790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
