AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663630 MtrunA17_Chr4g0001421 97.251 291 8 0 1 291 3 293 0.0 575
Msa0663630 MtrunA17_Chr2g0333871 77.816 293 58 4 1 291 3 290 1.89e-156 438
Msa0663630 MtrunA17_Chr1g0210741 62.264 212 80 0 80 291 69 280 4.00e-96 285
Msa0663630 MtrunA17_Chr7g0224571 25.373 201 117 5 85 278 15 189 6.53e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663630 AT1G16880.1 71.970 264 72 2 28 291 29 290 8.71e-135 383
Msa0663630 AT5G04740.1 62.673 217 81 0 75 291 85 301 4.18e-100 296
Msa0663630 AT1G16880.2 66.860 172 47 4 28 195 29 194 3.68e-72 221
Msa0663630 AT5G04740.2 59.664 119 48 0 173 291 82 200 9.52e-49 161
Msa0663630 AT3G01990.4 25.871 201 117 5 85 278 30 205 1.35e-11 64.7
Msa0663630 AT3G01990.3 25.871 201 117 5 85 278 30 205 1.37e-11 64.7
Msa0663630 AT3G01990.8 25.871 201 117 5 85 278 16 191 1.39e-11 64.3
Msa0663630 AT3G01990.9 25.871 201 117 5 85 278 16 191 1.51e-11 64.7
Msa0663630 AT3G01990.2 25.871 201 117 5 85 278 30 205 1.64e-11 64.3
Msa0663630 AT3G01990.11 25.871 201 117 5 85 278 16 191 1.68e-11 64.7
Msa0663630 AT3G01990.6 25.871 201 117 5 85 278 30 205 1.74e-11 64.7
Msa0663630 AT3G01990.7 25.871 201 117 5 85 278 30 205 1.83e-11 64.7
Msa0663630 AT3G01990.5 25.871 201 117 5 85 278 30 205 1.83e-11 64.7
Msa0663630 AT3G01990.10 25.871 201 117 5 85 278 16 191 1.99e-11 64.7
Msa0663630 AT3G01990.1 25.871 201 117 5 85 278 16 191 1.99e-11 64.7

Find 82 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATAAAATACTGTATTTA+TGG 0.151469 4_4:+2522550 Msa0663630:three_prime_UTR
TTTGTCAGGTTGTTGTCTTC+TGG 0.190236 4_4:+2519047 Msa0663630:intron
CTTTAAATGCTGCTGATATT+TGG 0.198365 4_4:+2522474 Msa0663630:three_prime_UTR
TGATAATAGTTTGAGAGTTT+TGG 0.215649 4_4:+2517967 Msa0663630:CDS
AGATTCATCACCTGCTCTTT+TGG 0.222017 4_4:-2520557 None:intergenic
TCTTGGTCAATTATGACTAT+TGG 0.255614 4_4:-2519294 None:intergenic
ATGTCAAATTTGTAAGAATT+AGG 0.273115 4_4:-2517811 None:intergenic
AATCATAAAACTGAATTAAC+AGG 0.273586 4_4:+2522397 Msa0663630:three_prime_UTR
TTAGCAATGGGAGCAGCTTT+TGG 0.275092 4_4:+2520524 Msa0663630:CDS
CTTGGTCAATTATGACTATT+GGG 0.278108 4_4:-2519293 None:intergenic
ATTGACATTGCTGTTGAATC+TGG 0.326851 4_4:+2521185 Msa0663630:CDS
GTTTGCATTCATTGTTTCAT+TGG 0.328185 4_4:+2522341 Msa0663630:three_prime_UTR
GAGGAGAAATGAAGAATAAC+TGG 0.343325 4_4:+2522364 Msa0663630:three_prime_UTR
AAAGAGATGCCCTTCAAAAC+TGG 0.347836 4_4:-2522251 None:intergenic
TTTGCATTCATTGTTTCATT+GGG 0.396621 4_4:+2522342 Msa0663630:three_prime_UTR
TGTTTGAACCTAGGGGCTCT+TGG 0.406397 4_4:+2521689 Msa0663630:intron
AAACTGGATTCCTCAGTTGC+CGG 0.412489 4_4:-2522235 None:intergenic
ATCTCCACCACAGTTGCATC+TGG 0.413372 4_4:-2519324 None:intergenic
CTTAGGCCTCAATGTTGTTA+AGG 0.415434 4_4:+2519485 Msa0663630:CDS
GTTACTTTCTTCACAAAAGA+AGG 0.417045 4_4:+2518053 Msa0663630:CDS
GCTATGAGTGCTTTGAGACT+TGG 0.418351 4_4:+2517923 Msa0663630:CDS
AGTACCTGCACATCAGTAAC+AGG 0.440436 4_4:-2519098 None:intergenic
GAGGGCATGAATGAAAGTTT+TGG 0.442821 4_4:+2522574 Msa0663630:three_prime_UTR
GGAAGATCCAGAGTTGTTAG+AGG 0.470609 4_4:+2520329 Msa0663630:CDS
AGATTAAAGTTACCTGCTGC+AGG 0.475170 4_4:-2521761 None:intergenic
TGGAGATAACTTTCGGTGAT+CGG 0.475265 4_4:+2519340 Msa0663630:CDS
CGAATTGCCTCTAACAACTC+TGG 0.479030 4_4:-2520336 None:intergenic
CGAATGCATTACCTTCGATC+TGG 0.482009 4_4:-2520945 None:intergenic
AATCAGCAAGCCCCTGCAGC+AGG 0.483771 4_4:+2521749 Msa0663630:CDS
GTGGAGACAGCTGATCGGCC+TGG 0.489025 4_4:+2521128 Msa0663630:CDS
AATAAAGTAAAATAAGAGAC+AGG 0.493335 4_4:-2517692 None:intergenic
TTCATATGAATGAAACAAAA+CGG 0.504007 4_4:-2517776 None:intergenic
ATAACTTTCGGTGATCGGCT+TGG 0.510246 4_4:+2519345 Msa0663630:CDS
TCAAGTTCTCAGTTAGCAAT+GGG 0.515912 4_4:+2520512 Msa0663630:CDS
CAGTGATACTGGCCGAAAAG+TGG 0.519005 4_4:+2520308 Msa0663630:intron
GGATAACAGGGTGGAAATCA+AGG 0.522473 4_4:+2519249 Msa0663630:intron
GAGATATTTCTTGAGGCGTC+CGG 0.523812 4_4:+2522216 Msa0663630:CDS
AAGTTTCATGTTAGCTACAA+AGG 0.527152 4_4:+2521720 Msa0663630:CDS
AATCTCAAGTTATTGAAAAG+TGG 0.527375 4_4:-2522600 None:intergenic
CACATAAACATATCCGATGA+TGG 0.529758 4_4:+2520921 Msa0663630:CDS
GCATTCATTGTTTCATTGGG+AGG 0.530901 4_4:+2522345 Msa0663630:three_prime_UTR
AGCACCTGTTACTGATGTGC+AGG 0.531571 4_4:+2519094 Msa0663630:CDS
TTGCATCTGGATCCAAGTCT+TGG 0.535486 4_4:-2519311 None:intergenic
GCTTCATTAACTCTAGGACT+TGG 0.544643 4_4:-2522623 None:intergenic
AAAATACTGTATTTATGGTG+AGG 0.545823 4_4:+2522555 Msa0663630:three_prime_UTR
CCTTCGATCTGGACCATCAT+CGG 0.546047 4_4:-2520934 None:intergenic
ATCAAGTTCTCAGTTAGCAA+TGG 0.546569 4_4:+2520511 Msa0663630:CDS
AAATACTGTATTTATGGTGA+GGG 0.549877 4_4:+2522556 Msa0663630:three_prime_UTR
ATTTGTAAGAATTAGGAAAG+TGG 0.551335 4_4:-2517804 None:intergenic
TTGTTTCATTCATATGAATG+TGG 0.556654 4_4:+2517781 Msa0663630:five_prime_UTR
ATTAAAGTTACCTGCTGCAG+GGG 0.562709 4_4:-2521759 None:intergenic
AGAACTGCTTCATTAACTCT+AGG 0.566029 4_4:-2522629 None:intergenic
ACAAGATCGACAAGTAATCC+AGG 0.566828 4_4:-2521146 None:intergenic
CATTTGCCTTAACAACATTG+AGG 0.567718 4_4:-2519491 None:intergenic
AGTCATAATTGACCAAGACT+TGG 0.567923 4_4:+2519299 Msa0663630:CDS
GTAACAGGTGCTGCCGCTCG+AGG 0.568447 4_4:-2519083 None:intergenic
CAAGAAATATCTCAAGCTGT+TGG 0.569442 4_4:-2522206 None:intergenic
AGTATAACACCACCATGGAT+TGG 0.571048 4_4:+2522313 Msa0663630:three_prime_UTR
CTTGAGGCGTCCGGCAACTG+AGG 0.581879 4_4:+2522225 Msa0663630:CDS
TAACAGGTGCTGCCGCTCGA+GGG 0.586405 4_4:-2519082 None:intergenic
AATTGTCATTCAGGTTGATG+TGG 0.589579 4_4:+2520887 Msa0663630:intron
GATTAAAGTTACCTGCTGCA+GGG 0.589784 4_4:-2521760 None:intergenic
ACTTCTACCTCCAAAAGAGC+AGG 0.595122 4_4:+2520547 Msa0663630:CDS
CTCAAGTTATTGAAAAGTGG+TGG 0.597044 4_4:-2522597 None:intergenic
CCGATGATGGTCCAGATCGA+AGG 0.598336 4_4:+2520934 Msa0663630:CDS
TGCAAACATTCACCAATCCA+TGG 0.598744 4_4:-2522325 None:intergenic
AGTAAAATAAGAGACAGGAA+TGG 0.599760 4_4:-2517687 None:intergenic
ACAGCTTGAGATATTTCTTG+AGG 0.602665 4_4:+2522209 Msa0663630:CDS
TCAATTATGACTATTGGGGT+CGG 0.614778 4_4:-2519288 None:intergenic
TATGACTATTGGGGTCGGAA+CGG 0.615998 4_4:-2519283 None:intergenic
ACTGTGGTGGAGATAACTTT+CGG 0.631847 4_4:+2519333 Msa0663630:CDS
TCTATGTGGAGACAGCTGAT+CGG 0.632715 4_4:+2521123 Msa0663630:CDS
ATCATAAAACTGAATTAACA+GGG 0.638526 4_4:+2522398 Msa0663630:three_prime_UTR
TTGGTCAATTATGACTATTG+GGG 0.653500 4_4:-2519292 None:intergenic
TTTGGAGTATAACACCACCA+TGG 0.661005 4_4:+2522308 Msa0663630:three_prime_UTR
CTTGGATCCAGATGCAACTG+TGG 0.661276 4_4:+2519317 Msa0663630:CDS
AACTACTATTATCCCTCGAG+CGG 0.661528 4_4:+2519070 Msa0663630:CDS
ATGAGTGCATTAAAAGACTT+AGG 0.662772 4_4:+2519468 Msa0663630:CDS
TAATCTGATTCAGTATCACC+CGG 0.667172 4_4:+2520374 Msa0663630:CDS
GGATCCAGATGCAACTGTGG+TGG 0.679796 4_4:+2519320 Msa0663630:CDS
ATCTGGAGAATTTGACACTG+AGG 0.685475 4_4:+2521202 Msa0663630:CDS
AAACATTCACCAATCCATGG+TGG 0.770447 4_4:-2522322 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATATATTCAAAAGT+GGG - chr4_4:2518694-2518713 None:intergenic 10.0%
!! AAAAAATATATATTCAAAAG+TGG - chr4_4:2518695-2518714 None:intergenic 10.0%
!! AAAATAAAATACTGTATTTA+TGG + chr4_4:2522550-2522569 Msa0663630:three_prime_UTR 10.0%
!!! CATTTTGAACTAAAAAAAAA+AGG + chr4_4:2517895-2517914 Msa0663630:five_prime_UTR 15.0%
!!! TTAAATCTTGAATTATTTTG+AGG - chr4_4:2518509-2518528 None:intergenic 15.0%
!!! ATTTTTTTACAAAATTGTAG+TGG + chr4_4:2518708-2518727 Msa0663630:intron 15.0%
!! ATTAATTAAGTTAGTAGATT+AGG + chr4_4:2518875-2518894 Msa0663630:intron 15.0%
!!! TTATTTTTGTTTCTTTTATG+TGG + chr4_4:2519228-2519247 Msa0663630:intron 15.0%
!!! TAAGCTATTTCTATAATAAA+AGG + chr4_4:2519888-2519907 Msa0663630:intron 15.0%
!!! AAAACAATTTGACTTTTTTT+TGG - chr4_4:2519937-2519956 None:intergenic 15.0%
!!! TTCTGTAATGTATATTTTAT+TGG - chr4_4:2520705-2520724 None:intergenic 15.0%
!!! ATCTTGATTTTTTATCATTT+AGG - chr4_4:2522050-2522069 None:intergenic 15.0%
!! AATAAAGTAAAATAAGAGAC+AGG - chr4_4:2517695-2517714 None:intergenic 20.0%
!! TTCATATGAATGAAACAAAA+CGG - chr4_4:2517779-2517798 None:intergenic 20.0%
!! ATGTCAAATTTGTAAGAATT+AGG - chr4_4:2517814-2517833 None:intergenic 20.0%
!! TCATAAATCATATCTATGAA+TGG - chr4_4:2518286-2518305 None:intergenic 20.0%
!! TGTATTGCTTATGTTAATTA+TGG + chr4_4:2518766-2518785 Msa0663630:intron 20.0%
!! TTGAATTTCTAATACTGTTT+AGG - chr4_4:2520164-2520183 None:intergenic 20.0%
!! TTCTGTAAATTGAAAAGATA+AGG + chr4_4:2520642-2520661 Msa0663630:intron 20.0%
!! TCTGTAAATTGAAAAGATAA+GGG + chr4_4:2520643-2520662 Msa0663630:intron 20.0%
!! TGTTAAAGTCATGATATATA+AGG + chr4_4:2521020-2521039 Msa0663630:intron 20.0%
!! ATATGTTTGGTAAATTGTAA+TGG - chr4_4:2522027-2522046 None:intergenic 20.0%
!!! TTTATCATTTAGGATATGTT+TGG - chr4_4:2522040-2522059 None:intergenic 20.0%
!!! CATGACATTATATTTTCTTT+TGG + chr4_4:2522290-2522309 Msa0663630:three_prime_UTR 20.0%
!! AATCATAAAACTGAATTAAC+AGG + chr4_4:2522397-2522416 Msa0663630:three_prime_UTR 20.0%
!! ATCATAAAACTGAATTAACA+GGG + chr4_4:2522398-2522417 Msa0663630:three_prime_UTR 20.0%
! TTGTTTCATTCATATGAATG+TGG + chr4_4:2517781-2517800 Msa0663630:five_prime_UTR 25.0%
! ATTTGTAAGAATTAGGAAAG+TGG - chr4_4:2517807-2517826 None:intergenic 25.0%
!!! AAGTTAGGATTTTGAGAAAT+GGG - chr4_4:2517850-2517869 None:intergenic 25.0%
!!! AAAGTTAGGATTTTGAGAAA+TGG - chr4_4:2517851-2517870 None:intergenic 25.0%
! GAACTAAAAAAAAAAGGCTA+TGG + chr4_4:2517901-2517920 Msa0663630:exon 25.0%
!! TGATAATAGTTTGAGAGTTT+TGG + chr4_4:2517967-2517986 Msa0663630:CDS 25.0%
!! TTAGAATTTGAGCTTTTAGT+AGG + chr4_4:2518177-2518196 Msa0663630:intron 25.0%
! TCATAGATATGATTTATGAC+CGG + chr4_4:2518287-2518306 Msa0663630:intron 25.0%
! TATTCAAAAGTGGGTATAAT+TGG - chr4_4:2518685-2518704 None:intergenic 25.0%
! GGAACTCATTTACTTATATT+TGG + chr4_4:2518729-2518748 Msa0663630:intron 25.0%
! TTCTTCATGAAAATATGACA+AGG - chr4_4:2518829-2518848 None:intergenic 25.0%
! ATTAAGTTAGTAGATTAGGT+TGG + chr4_4:2518879-2518898 Msa0663630:intron 25.0%
!! AATAGTAAACGTTTGAAACT+TGG + chr4_4:2518945-2518964 Msa0663630:intron 25.0%
!! ATAGTAAACGTTTGAAACTT+GGG + chr4_4:2518946-2518965 Msa0663630:intron 25.0%
! ATACAATTAACACACAGAAA+TGG - chr4_4:2519013-2519032 None:intergenic 25.0%
! GCATTATAGAAATGAACTAT+GGG - chr4_4:2519176-2519195 None:intergenic 25.0%
! AGCATTATAGAAATGAACTA+TGG - chr4_4:2519177-2519196 None:intergenic 25.0%
!! TTTCTTTTATGTGGATAACA+GGG + chr4_4:2519237-2519256 Msa0663630:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr4_4:2519838-2519857 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr4_4:2519839-2519858 None:intergenic 25.0%
! TCAAATAAGTCAATCCAAAT+AGG + chr4_4:2520065-2520084 Msa0663630:intron 25.0%
! ATTTCTAATACTGTTTAGGT+AGG - chr4_4:2520160-2520179 None:intergenic 25.0%
!! CAAGATATTTGTTGCTTAAA+AGG - chr4_4:2520230-2520249 None:intergenic 25.0%
!! CTTTTAAGCAACAAATATCT+TGG + chr4_4:2520228-2520247 Msa0663630:intron 25.0%
!! AATTTTCAAATCGATGATTC+AGG + chr4_4:2520487-2520506 Msa0663630:intron 25.0%
! TTATTGGTGAAAAATGAAAC+AGG - chr4_4:2520689-2520708 None:intergenic 25.0%
! ATACATTACAGAAGACATTA+TGG + chr4_4:2520712-2520731 Msa0663630:intron 25.0%
! TTCTTTCTATTTGTGATAGA+GGG - chr4_4:2520855-2520874 None:intergenic 25.0%
! TTTCTTTCTATTTGTGATAG+AGG - chr4_4:2520856-2520875 None:intergenic 25.0%
! ATACTCATGCTTTCTAATTT+CGG + chr4_4:2521053-2521072 Msa0663630:intron 25.0%
!!! ATTTTGTAGTTTGTTCTATG+TGG + chr4_4:2521109-2521128 Msa0663630:intron 25.0%
!!! GATACATTCATTTTGAGTAA+TGG - chr4_4:2521294-2521313 None:intergenic 25.0%
! TCCTACTATTCAATGAATTA+GGG - chr4_4:2521544-2521563 None:intergenic 25.0%
! TTCCTACTATTCAATGAATT+AGG - chr4_4:2521545-2521564 None:intergenic 25.0%
! GATTGTTAGAATAGAAAATC+TGG - chr4_4:2521606-2521625 None:intergenic 25.0%
! TTGAGCTTCAAAAAAAAAGA+AGG + chr4_4:2521636-2521655 Msa0663630:intron 25.0%
! TGAGCTTCAAAAAAAAAGAA+GGG + chr4_4:2521637-2521656 Msa0663630:intron 25.0%
! ATGATTAAAGTAGATTTGTC+TGG + chr4_4:2521888-2521907 Msa0663630:intron 25.0%
! CTATAAACTATACGCTATAA+GGG - chr4_4:2521981-2522000 None:intergenic 25.0%
! TTTGCATTCATTGTTTCATT+GGG + chr4_4:2522342-2522361 Msa0663630:three_prime_UTR 25.0%
! AAAATACTGTATTTATGGTG+AGG + chr4_4:2522555-2522574 Msa0663630:three_prime_UTR 25.0%
! AAATACTGTATTTATGGTGA+GGG + chr4_4:2522556-2522575 Msa0663630:three_prime_UTR 25.0%
! AATCTCAAGTTATTGAAAAG+TGG - chr4_4:2522603-2522622 None:intergenic 25.0%
AGTAAAATAAGAGACAGGAA+TGG - chr4_4:2517690-2517709 None:intergenic 30.0%
!!! AAACGGTTGTTTCTGTTTTT+TGG - chr4_4:2517762-2517781 None:intergenic 30.0%
CAGAGAAAAGAGAAAAAGTT+AGG - chr4_4:2517865-2517884 None:intergenic 30.0%
AAAAAAGGGACACAGAAAAT+GGG - chr4_4:2517998-2518017 None:intergenic 30.0%
!! CAGAAGAAGCATTCAAAAAA+GGG - chr4_4:2518012-2518031 None:intergenic 30.0%
! CTTTTGTGAAGAAAGTAACA+TGG - chr4_4:2518052-2518071 None:intergenic 30.0%
! GTTACTTTCTTCACAAAAGA+AGG + chr4_4:2518053-2518072 Msa0663630:CDS 30.0%
! CTTTGATCATTGGTTACTTA+TGG + chr4_4:2518084-2518103 Msa0663630:intron 30.0%
CATAGATATGATTTATGACC+GGG + chr4_4:2518288-2518307 Msa0663630:intron 30.0%
! GAGGTGTATTTTCGAAATAT+CGG - chr4_4:2518490-2518509 None:intergenic 30.0%
AACATAAGCAATACAAGCAA+AGG - chr4_4:2518761-2518780 None:intergenic 30.0%
CAGAAATGGACATATTACTT+AGG - chr4_4:2518999-2519018 None:intergenic 30.0%
! GTTTCTTTTATGTGGATAAC+AGG + chr4_4:2519236-2519255 Msa0663630:intron 30.0%
TTGGTCAATTATGACTATTG+GGG - chr4_4:2519295-2519314 None:intergenic 30.0%
CTTGGTCAATTATGACTATT+GGG - chr4_4:2519296-2519315 None:intergenic 30.0%
TCTTGGTCAATTATGACTAT+TGG - chr4_4:2519297-2519316 None:intergenic 30.0%
!!! TATCTGTTGCTTTTTCTTAG+AGG + chr4_4:2519423-2519442 Msa0663630:intron 30.0%
!!! ATCTGTTGCTTTTTCTTAGA+GGG + chr4_4:2519424-2519443 Msa0663630:intron 30.0%
ATGAGTGCATTAAAAGACTT+AGG + chr4_4:2519468-2519487 Msa0663630:CDS 30.0%
! TGTTAAGGCAAATGTTTTTC+TGG + chr4_4:2519500-2519519 Msa0663630:CDS 30.0%
! AATGTTTTTCTGGATTCTTC+TGG + chr4_4:2519510-2519529 Msa0663630:CDS 30.0%
AATATCTGAGAGTTTCAGTT+GGG - chr4_4:2519732-2519751 None:intergenic 30.0%
!! TATTTTATTTACTCCACCAC+TGG + chr4_4:2519755-2519774 Msa0663630:intron 30.0%
TGATGAATCTCTTTACTTCT+CGG + chr4_4:2520570-2520589 Msa0663630:intron 30.0%
! TGTGAATTTTTCATTCTCTC+TGG + chr4_4:2520607-2520626 Msa0663630:intron 30.0%
TTCATTACCAATTGTCATTC+AGG + chr4_4:2520878-2520897 Msa0663630:intron 30.0%
GAATGTATCAATGTTGAGTA+TGG + chr4_4:2521305-2521324 Msa0663630:intron 30.0%
ACCCTAATTCATTGAATAGT+AGG + chr4_4:2521540-2521559 Msa0663630:intron 30.0%
GAGCTTCAAAAAAAAAGAAG+GGG + chr4_4:2521638-2521657 Msa0663630:intron 30.0%
!!! ACAAAGCTTTTTCATCAGAT+TGG - chr4_4:2521672-2521691 None:intergenic 30.0%
!! AAAAAGCTTTGTTTGAACCT+AGG + chr4_4:2521680-2521699 Msa0663630:intron 30.0%
!! AAAAGCTTTGTTTGAACCTA+GGG + chr4_4:2521681-2521700 Msa0663630:intron 30.0%
AAGTTTCATGTTAGCTACAA+AGG + chr4_4:2521720-2521739 Msa0663630:CDS 30.0%
TTTAATCGTCAAGTACTCTT+TGG + chr4_4:2521814-2521833 Msa0663630:intron 30.0%
TGTTATTCGTTGTAAGCTAA+TGG - chr4_4:2521850-2521869 None:intergenic 30.0%
AAGTAGATTTGTCTGGTAAA+CGG + chr4_4:2521895-2521914 Msa0663630:intron 30.0%
GCTATAAACTATACGCTATA+AGG - chr4_4:2521982-2522001 None:intergenic 30.0%
AACTCATAGTACATTGAAGT+AGG + chr4_4:2522078-2522097 Msa0663630:intron 30.0%
GTTTGCATTCATTGTTTCAT+TGG + chr4_4:2522341-2522360 Msa0663630:three_prime_UTR 30.0%
CTTTAAATGCTGCTGATATT+TGG + chr4_4:2522474-2522493 Msa0663630:three_prime_UTR 30.0%
CAAAAAAGGGACACAGAAAA+TGG - chr4_4:2517999-2518018 None:intergenic 35.0%
!! CCAGAAGAAGCATTCAAAAA+AGG - chr4_4:2518013-2518032 None:intergenic 35.0%
!!! CCTTTTTTGAATGCTTCTTC+TGG + chr4_4:2518010-2518029 Msa0663630:CDS 35.0%
!! GGTAAACTAGCTTTGATCAT+TGG + chr4_4:2518074-2518093 Msa0663630:intron 35.0%
! GAATTTGAGCTTTTAGTAGG+TGG + chr4_4:2518180-2518199 Msa0663630:intron 35.0%
! AGCTTTTAGTAGGTGGTTAA+TGG + chr4_4:2518187-2518206 Msa0663630:intron 35.0%
AGCACGATTACCAATATCTT+CGG - chr4_4:2518604-2518623 None:intergenic 35.0%
CAAACAAGTCATATACCACT+GGG - chr4_4:2518649-2518668 None:intergenic 35.0%
ACAAACAAGTCATATACCAC+TGG - chr4_4:2518650-2518669 None:intergenic 35.0%
TAAGCAATACAAGCAAAGGA+AGG - chr4_4:2518757-2518776 None:intergenic 35.0%
TTACTGCTCTTTCTTTCGTT+TGG + chr4_4:2518919-2518938 Msa0663630:intron 35.0%
AAGACAACAACCTGACAAAA+GGG - chr4_4:2519046-2519065 None:intergenic 35.0%
GCAAATAACGACAATCACAT+AGG - chr4_4:2519136-2519155 None:intergenic 35.0%
TAGAAATGAACTATGGGTCT+TGG - chr4_4:2519170-2519189 None:intergenic 35.0%
TCAATTATGACTATTGGGGT+CGG - chr4_4:2519291-2519310 None:intergenic 35.0%
AGTCATAATTGACCAAGACT+TGG + chr4_4:2519299-2519318 Msa0663630:CDS 35.0%
CATTTGCCTTAACAACATTG+AGG - chr4_4:2519494-2519513 None:intergenic 35.0%
! TAACACTTACGCTTTTGTGA+TGG - chr4_4:2519553-2519572 None:intergenic 35.0%
GAATATCTGAGAGTTTCAGT+TGG - chr4_4:2519733-2519752 None:intergenic 35.0%
TTAGAGTAGATGGTGCAATT+AGG - chr4_4:2519811-2519830 None:intergenic 35.0%
TATCTATAAGTTCTCCACGA+TGG - chr4_4:2519981-2520000 None:intergenic 35.0%
! TGTTTAGCTCGCATAAAGAA+AGG - chr4_4:2520091-2520110 None:intergenic 35.0%
!! TGAAACTTGTTGTGCAACTT+AGG + chr4_4:2520194-2520213 Msa0663630:intron 35.0%
AGCAACAAATATCTTGGATG+AGG + chr4_4:2520234-2520253 Msa0663630:intron 35.0%
TCGCTTCTTTAGTAATTCCT+TGG + chr4_4:2520264-2520283 Msa0663630:intron 35.0%
CGCTTCTTTAGTAATTCCTT+GGG + chr4_4:2520265-2520284 Msa0663630:intron 35.0%
TAATCTGATTCAGTATCACC+CGG + chr4_4:2520374-2520393 Msa0663630:CDS 35.0%
TGGTTGTAATATATGCCAAC+AGG + chr4_4:2520439-2520458 Msa0663630:intron 35.0%
ATCAAGTTCTCAGTTAGCAA+TGG + chr4_4:2520511-2520530 Msa0663630:CDS 35.0%
TCAAGTTCTCAGTTAGCAAT+GGG + chr4_4:2520512-2520531 Msa0663630:CDS 35.0%
TTTCTATTTGTGATAGAGGG+AGG - chr4_4:2520852-2520871 None:intergenic 35.0%
ACATCAACCTGAATGACAAT+TGG - chr4_4:2520888-2520907 None:intergenic 35.0%
!! AATTGTCATTCAGGTTGATG+TGG + chr4_4:2520887-2520906 Msa0663630:intron 35.0%
CACATAAACATATCCGATGA+TGG + chr4_4:2520921-2520940 Msa0663630:CDS 35.0%
! ATTGACATTGCTGTTGAATC+TGG + chr4_4:2521185-2521204 Msa0663630:CDS 35.0%
TTTGTTGGGTTACAACTATG+AGG + chr4_4:2521413-2521432 Msa0663630:intron 35.0%
TTGTTGGGTTACAACTATGA+GGG + chr4_4:2521414-2521433 Msa0663630:intron 35.0%
!! AAAGCTTTGTTTGAACCTAG+GGG + chr4_4:2521682-2521701 Msa0663630:intron 35.0%
ATTTGTCTGGTAAACGGTAA+TGG + chr4_4:2521901-2521920 Msa0663630:intron 35.0%
CTTCATATTTACCATGTTGC+AGG + chr4_4:2522177-2522196 Msa0663630:intron 35.0%
CAAGAAATATCTCAAGCTGT+TGG - chr4_4:2522209-2522228 None:intergenic 35.0%
ACAGCTTGAGATATTTCTTG+AGG + chr4_4:2522209-2522228 Msa0663630:CDS 35.0%
GAGGAGAAATGAAGAATAAC+TGG + chr4_4:2522364-2522383 Msa0663630:three_prime_UTR 35.0%
CTCAAGTTATTGAAAAGTGG+TGG - chr4_4:2522600-2522619 None:intergenic 35.0%
AGAACTGCTTCATTAACTCT+AGG - chr4_4:2522632-2522651 None:intergenic 35.0%
ACGACGTCATAATACATACC+CGG - chr4_4:2518309-2518328 None:intergenic 40.0%
CTCGTATGTACCGAAGATAT+TGG + chr4_4:2518591-2518610 Msa0663630:intron 40.0%
! GTACTATGTACCCTTTTGTC+AGG + chr4_4:2519033-2519052 Msa0663630:intron 40.0%
GAAGACAACAACCTGACAAA+AGG - chr4_4:2519047-2519066 None:intergenic 40.0%
! TTTGTCAGGTTGTTGTCTTC+TGG + chr4_4:2519047-2519066 Msa0663630:intron 40.0%
AACTACTATTATCCCTCGAG+CGG + chr4_4:2519070-2519089 Msa0663630:CDS 40.0%
! CTTTTATGTGGATAACAGGG+TGG + chr4_4:2519240-2519259 Msa0663630:intron 40.0%
! ACTGTGGTGGAGATAACTTT+CGG + chr4_4:2519333-2519352 Msa0663630:CDS 40.0%
TGGAGATAACTTTCGGTGAT+CGG + chr4_4:2519340-2519359 Msa0663630:CDS 40.0%
CTTAGGCCTCAATGTTGTTA+AGG + chr4_4:2519485-2519504 Msa0663630:CDS 40.0%
ACCGAGTATCTCTTCAGTTT+AGG + chr4_4:2519694-2519713 Msa0663630:intron 40.0%
GCCTAAACTGAAGAGATACT+CGG - chr4_4:2519698-2519717 None:intergenic 40.0%
!!! ACAGGGCTTTTTAGAGTAGA+TGG - chr4_4:2519821-2519840 None:intergenic 40.0%
! CTACTCTAAAAAGCCCTGTT+TGG + chr4_4:2519822-2519841 Msa0663630:intron 40.0%
AGTCTGTTTCAGAGAGCTAA+TGG - chr4_4:2520019-2520038 None:intergenic 40.0%
CGCATAAAGAAAGGCCTATT+TGG - chr4_4:2520082-2520101 None:intergenic 40.0%
TAGTAATTCCTTGGGTATGC+TGG + chr4_4:2520273-2520292 Msa0663630:intron 40.0%
!! ACTCTGGATCTTCCACTTTT+CGG - chr4_4:2520323-2520342 None:intergenic 40.0%
!! GATAGTTGGTAAAGCATACC+GGG - chr4_4:2520395-2520414 None:intergenic 40.0%
!! GGATAGTTGGTAAAGCATAC+CGG - chr4_4:2520396-2520415 None:intergenic 40.0%
CAATGAGAAAGGAGGATAGT+TGG - chr4_4:2520409-2520428 None:intergenic 40.0%
CAACTATCCTCCTTTCTCAT+TGG + chr4_4:2520407-2520426 Msa0663630:intron 40.0%
TATCCTCCTTTCTCATTGGA+GGG + chr4_4:2520411-2520430 Msa0663630:intron 40.0%
AAATCACCCTCCAATGAGAA+AGG - chr4_4:2520420-2520439 None:intergenic 40.0%
TTTCTCATTGGAGGGTGATT+TGG + chr4_4:2520419-2520438 Msa0663630:intron 40.0%
! AGATTCATCACCTGCTCTTT+TGG - chr4_4:2520560-2520579 None:intergenic 40.0%
ACAAGATCGACAAGTAATCC+AGG - chr4_4:2521149-2521168 None:intergenic 40.0%
ATCTGGAGAATTTGACACTG+AGG + chr4_4:2521202-2521221 Msa0663630:CDS 40.0%
! AAACCTTCTAAGTTCTGACG+TGG + chr4_4:2521268-2521287 Msa0663630:intron 40.0%
GCTCATAATCGCTGATAAGA+GGG + chr4_4:2521327-2521346 Msa0663630:intron 40.0%
GCGTGGCTTATTCATTTGTT+GGG + chr4_4:2521399-2521418 Msa0663630:intron 40.0%
! TACGGATAAGCTTTGTGAAC+TGG + chr4_4:2521475-2521494 Msa0663630:intron 40.0%
ATTAAAGTTACCTGCTGCAG+GGG - chr4_4:2521762-2521781 None:intergenic 40.0%
GATTAAAGTTACCTGCTGCA+GGG - chr4_4:2521763-2521782 None:intergenic 40.0%
AGATTAAAGTTACCTGCTGC+AGG - chr4_4:2521764-2521783 None:intergenic 40.0%
GTACATTGAAGTAGGCAAGT+AGG + chr4_4:2522086-2522105 Msa0663630:intron 40.0%
!! ACTGAGGAATCCAGTTTTGA+AGG + chr4_4:2522241-2522260 Msa0663630:CDS 40.0%
!!! CTGAGGAATCCAGTTTTGAA+GGG + chr4_4:2522242-2522261 Msa0663630:CDS 40.0%
AAAGAGATGCCCTTCAAAAC+TGG - chr4_4:2522254-2522273 None:intergenic 40.0%
! TTTGGAGTATAACACCACCA+TGG + chr4_4:2522308-2522327 Msa0663630:three_prime_UTR 40.0%
AGTATAACACCACCATGGAT+TGG + chr4_4:2522313-2522332 Msa0663630:three_prime_UTR 40.0%
AAACATTCACCAATCCATGG+TGG - chr4_4:2522325-2522344 None:intergenic 40.0%
TGCAAACATTCACCAATCCA+TGG - chr4_4:2522328-2522347 None:intergenic 40.0%
GCATTCATTGTTTCATTGGG+AGG + chr4_4:2522345-2522364 Msa0663630:three_prime_UTR 40.0%
!! GAGGGCATGAATGAAAGTTT+TGG + chr4_4:2522574-2522593 Msa0663630:three_prime_UTR 40.0%
!! GCTTCATTAACTCTAGGACT+TGG - chr4_4:2522626-2522645 None:intergenic 40.0%
!! GCTATGAGTGCTTTGAGACT+TGG + chr4_4:2517923-2517942 Msa0663630:CDS 45.0%
AAGTCATATACCACTGGGTG+GGG - chr4_4:2518644-2518663 None:intergenic 45.0%
CAAGTCATATACCACTGGGT+GGG - chr4_4:2518645-2518664 None:intergenic 45.0%
ACAAGTCATATACCACTGGG+TGG - chr4_4:2518646-2518665 None:intergenic 45.0%
! TTTTCATGAAGAACGCCTGC+AGG + chr4_4:2518836-2518855 Msa0663630:intron 45.0%
AGTACCTGCACATCAGTAAC+AGG - chr4_4:2519101-2519120 None:intergenic 45.0%
GTTACTGATGTGCAGGTACT+CGG + chr4_4:2519101-2519120 Msa0663630:intron 45.0%
! TGTCGACTGTGCTTGTTGAT+CGG + chr4_4:2519197-2519216 Msa0663630:intron 45.0%
GGATAACAGGGTGGAAATCA+AGG + chr4_4:2519249-2519268 Msa0663630:intron 45.0%
TATGACTATTGGGGTCGGAA+CGG - chr4_4:2519286-2519305 None:intergenic 45.0%
TTGCATCTGGATCCAAGTCT+TGG - chr4_4:2519314-2519333 None:intergenic 45.0%
ATAACTTTCGGTGATCGGCT+TGG + chr4_4:2519345-2519364 Msa0663630:CDS 45.0%
TCTTCAGTTTAGGCCAGCAT+TGG + chr4_4:2519704-2519723 Msa0663630:intron 45.0%
TTTCAGTTGGGTTCCAATGC+TGG - chr4_4:2519720-2519739 None:intergenic 45.0%
AGCACAAGGAATGACTAGTG+CGG - chr4_4:2519782-2519801 None:intergenic 45.0%
! CAATTAGGAGCAAGAGCACA+AGG - chr4_4:2519796-2519815 None:intergenic 45.0%
!! GCTATTTTCATGAGCCATCG+TGG + chr4_4:2519964-2519983 Msa0663630:intron 45.0%
TAATTCCTTGGGTATGCTGG+TGG + chr4_4:2520276-2520295 Msa0663630:intron 45.0%
! GGAGCTTTTTGCAGTGATAC+TGG + chr4_4:2520297-2520316 Msa0663630:intron 45.0%
GGAAGATCCAGAGTTGTTAG+AGG + chr4_4:2520329-2520348 Msa0663630:CDS 45.0%
CGAATTGCCTCTAACAACTC+TGG - chr4_4:2520339-2520358 None:intergenic 45.0%
CTATCCTCCTTTCTCATTGG+AGG + chr4_4:2520410-2520429 Msa0663630:intron 45.0%
GAGAAGTGAGAATTGCCTGT+TGG - chr4_4:2520457-2520476 None:intergenic 45.0%
! TTAGCAATGGGAGCAGCTTT+TGG + chr4_4:2520524-2520543 Msa0663630:CDS 45.0%
ACTTCTACCTCCAAAAGAGC+AGG + chr4_4:2520547-2520566 Msa0663630:CDS 45.0%
! TTCATCACCTGCTCTTTTGG+AGG - chr4_4:2520557-2520576 None:intergenic 45.0%
CGAATGCATTACCTTCGATC+TGG - chr4_4:2520948-2520967 None:intergenic 45.0%
TCTATGTGGAGACAGCTGAT+CGG + chr4_4:2521123-2521142 Msa0663630:CDS 45.0%
GGCTCATAATCGCTGATAAG+AGG + chr4_4:2521326-2521345 Msa0663630:intron 45.0%
!! TAATGAAAGCGCCTTCCGTT+TGG + chr4_4:2521376-2521395 Msa0663630:intron 45.0%
!! AATGAAAGCGCCTTCCGTTT+GGG + chr4_4:2521377-2521396 Msa0663630:intron 45.0%
ATGAATAAGCCACGCCCAAA+CGG - chr4_4:2521394-2521413 None:intergenic 45.0%
GGCGTGGCTTATTCATTTGT+TGG + chr4_4:2521398-2521417 Msa0663630:intron 45.0%
GGTTACAACTATGAGGGCTA+GGG + chr4_4:2521420-2521439 Msa0663630:intron 45.0%
GTTACAACTATGAGGGCTAG+GGG + chr4_4:2521421-2521440 Msa0663630:intron 45.0%
TTATCCGTAAACCGTAACGC+AGG - chr4_4:2521464-2521483 None:intergenic 45.0%
CACTAGATGCTTGCGCAATA+AGG - chr4_4:2522113-2522132 None:intergenic 45.0%
CTTATTGCGCAAGCATCTAG+TGG + chr4_4:2522111-2522130 Msa0663630:intron 45.0%
! GAGATATTTCTTGAGGCGTC+CGG + chr4_4:2522216-2522235 Msa0663630:CDS 45.0%
AAACTGGATTCCTCAGTTGC+CGG - chr4_4:2522238-2522257 None:intergenic 45.0%
AGCACCTGTTACTGATGTGC+AGG + chr4_4:2519094-2519113 Msa0663630:CDS 50.0%
CTTGGATCCAGATGCAACTG+TGG + chr4_4:2519317-2519336 Msa0663630:CDS 50.0%
ATCTCCACCACAGTTGCATC+TGG - chr4_4:2519327-2519346 None:intergenic 50.0%
GCACAAGGAATGACTAGTGC+GGG - chr4_4:2519781-2519800 None:intergenic 50.0%
CAGTGATACTGGCCGAAAAG+TGG + chr4_4:2520308-2520327 Msa0663630:intron 50.0%
TCACCCTCCAATGAGAAAGG+AGG - chr4_4:2520417-2520436 None:intergenic 50.0%
CCTTCGATCTGGACCATCAT+CGG - chr4_4:2520937-2520956 None:intergenic 50.0%
TGGCCACGTCAGAACTTAGA+AGG - chr4_4:2521274-2521293 None:intergenic 50.0%
GGGTTACAACTATGAGGGCT+AGG + chr4_4:2521419-2521438 Msa0663630:intron 50.0%
TGTTTGAACCTAGGGGCTCT+TGG + chr4_4:2521689-2521708 Msa0663630:intron 50.0%
GTTGGCAAGAACCTGCAACA+TGG - chr4_4:2522191-2522210 None:intergenic 50.0%
CATATACCACTGGGTGGGGT+TGG - chr4_4:2518640-2518659 None:intergenic 55.0%
TGAAGAACGCCTGCAGGACA+CGG + chr4_4:2518842-2518861 Msa0663630:intron 55.0%
GGATCCAGATGCAACTGTGG+TGG + chr4_4:2519320-2519339 Msa0663630:CDS 55.0%
AAGCTCCACCAGCATACCCA+AGG - chr4_4:2520284-2520303 None:intergenic 55.0%
! CCGATGATGGTCCAGATCGA+AGG + chr4_4:2520934-2520953 Msa0663630:CDS 55.0%
ATAAGCCACGCCCAAACGGA+AGG - chr4_4:2521390-2521409 None:intergenic 55.0%
AACTATGAGGGCTAGGGGTG+AGG + chr4_4:2521426-2521445 Msa0663630:intron 55.0%
ACTATGAGGGCTAGGGGTGA+GGG + chr4_4:2521427-2521446 Msa0663630:intron 55.0%
GCCACCTGCGTTACGGTTTA+CGG + chr4_4:2521457-2521476 Msa0663630:intron 55.0%
TCCGTAAACCGTAACGCAGG+TGG - chr4_4:2521461-2521480 None:intergenic 55.0%
TGCTTTAGCCAAGAGCCCCT+AGG - chr4_4:2521700-2521719 None:intergenic 55.0%
!! ACTGGGTGGGGTTGGCTACA+TGG - chr4_4:2518632-2518651 None:intergenic 60.0%
ATGTAGCCAACCCCACCCAG+TGG + chr4_4:2518631-2518650 Msa0663630:intron 60.0%
ACGCCTGCAGGACACGGATT+TGG + chr4_4:2518848-2518867 Msa0663630:intron 60.0%
CGCCTGCAGGACACGGATTT+GGG + chr4_4:2518849-2518868 Msa0663630:intron 60.0%
GCCTGCAGGACACGGATTTG+GGG + chr4_4:2518850-2518869 Msa0663630:intron 60.0%
ACCCCAAATCCGTGTCCTGC+AGG - chr4_4:2518854-2518873 None:intergenic 60.0%
! TAACAGGTGCTGCCGCTCGA+GGG - chr4_4:2519085-2519104 None:intergenic 60.0%
GAATGACTAGTGCGGGCCAG+TGG - chr4_4:2519774-2519793 None:intergenic 60.0%
CTATGAGGGCTAGGGGTGAG+GGG + chr4_4:2521428-2521447 Msa0663630:intron 60.0%
TATGAGGGCTAGGGGTGAGG+GGG + chr4_4:2521429-2521448 Msa0663630:intron 60.0%
AATCAGCAAGCCCCTGCAGC+AGG + chr4_4:2521749-2521768 Msa0663630:CDS 60.0%
! GTAACAGGTGCTGCCGCTCG+AGG - chr4_4:2519086-2519105 None:intergenic 65.0%
TGACTAGTGCGGGCCAGTGG+TGG - chr4_4:2519771-2519790 None:intergenic 65.0%
GTGGAGACAGCTGATCGGCC+TGG + chr4_4:2521128-2521147 Msa0663630:CDS 65.0%
AAGCGCCTTCCGTTTGGGCG+TGG + chr4_4:2521382-2521401 Msa0663630:intron 65.0%
ATGAGGGCTAGGGGTGAGGG+GGG + chr4_4:2521430-2521449 Msa0663630:intron 65.0%
GGGCTTCGCCACCTGCGTTA+CGG + chr4_4:2521450-2521469 Msa0663630:intron 65.0%
! CTTGAGGCGTCCGGCAACTG+AGG + chr4_4:2522225-2522244 Msa0663630:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 2517660 2522653 2517660 ID=Msa0663630;Name=Msa0663630
chr4_4 mRNA 2517660 2522653 2517660 ID=Msa0663630-mRNA-1;Parent=Msa0663630;Name=Msa0663630-mRNA-1;_AED=0.05;_eAED=0.05;_QI=260|1|1|1|1|1|10|377|296
chr4_4 exon 2517660 2518074 2517660 ID=Msa0663630-mRNA-1:exon:680;Parent=Msa0663630-mRNA-1
chr4_4 exon 2519055 2519115 2519055 ID=Msa0663630-mRNA-1:exon:681;Parent=Msa0663630-mRNA-1
chr4_4 exon 2519258 2519383 2519258 ID=Msa0663630-mRNA-1:exon:682;Parent=Msa0663630-mRNA-1
chr4_4 exon 2519468 2519562 2519468 ID=Msa0663630-mRNA-1:exon:683;Parent=Msa0663630-mRNA-1
chr4_4 exon 2520311 2520395 2520311 ID=Msa0663630-mRNA-1:exon:684;Parent=Msa0663630-mRNA-1
chr4_4 exon 2520509 2520568 2520509 ID=Msa0663630-mRNA-1:exon:685;Parent=Msa0663630-mRNA-1
chr4_4 exon 2520900 2520955 2520900 ID=Msa0663630-mRNA-1:exon:686;Parent=Msa0663630-mRNA-1
chr4_4 exon 2521118 2521223 2521118 ID=Msa0663630-mRNA-1:exon:687;Parent=Msa0663630-mRNA-1
chr4_4 exon 2521702 2521770 2521702 ID=Msa0663630-mRNA-1:exon:688;Parent=Msa0663630-mRNA-1
chr4_4 exon 2522199 2522653 2522199 ID=Msa0663630-mRNA-1:exon:689;Parent=Msa0663630-mRNA-1
chr4_4 five_prime_UTR 2517660 2517919 2517660 ID=Msa0663630-mRNA-1:five_prime_utr;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2517920 2518074 2517920 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2519055 2519115 2519055 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2519258 2519383 2519258 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2519468 2519562 2519468 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2520311 2520395 2520311 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2520509 2520568 2520509 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2520900 2520955 2520900 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2521118 2521223 2521118 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2521702 2521770 2521702 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 CDS 2522199 2522276 2522199 ID=Msa0663630-mRNA-1:cds;Parent=Msa0663630-mRNA-1
chr4_4 three_prime_UTR 2522277 2522653 2522277 ID=Msa0663630-mRNA-1:three_prime_utr;Parent=Msa0663630-mRNA-1
Gene Sequence

>Msa0663630

ATGGCTATGAGTGCTTTGAGACTTGGATTTCACTTCAGTGCTGCTACTGATAATAGTTTGAGAGTTTTGGAAAAACCCATTTTCTGTGTCCCTTTTTTGAATGCTTCTTCTGGCTTTGTTTCTACTAAGCCATGTTACTTTCTTCACAAAAGAAGGTTGTTGTCTTCTGGAACTACTATTATCCCTCGAGCGGCAGCACCTGTTACTGATGTGCAGGGTGGAAATCAAGGTGAGACTGATACCGTTCCGACCCCAATAGTCATAATTGACCAAGACTTGGATCCAGATGCAACTGTGGTGGAGATAACTTTCGGTGATCGGCTTGGAGCTCTTCTTGACACAATGAGTGCATTAAAAGACTTAGGCCTCAATGTTGTTAAGGCAAATGTTTTTCTGGATTCTTCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCTGATACTGGCCGAAAAGTGGAAGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAATAATCTGATTCAGTATCACCCGGAATCAAGTTCTCAGTTAGCAATGGGAGCAGCTTTTGGACTTCTACCTCCAAAAGAGCAGGTTGATGTGGACATTGCAACTCACATAAACATATCCGATGATGGTCCAGATCGAAGTTTGTTCTATGTGGAGACAGCTGATCGGCCTGGATTACTTGTCGATCTTGTAAAAAGTATTACTGACATTGACATTGCTGTTGAATCTGGAGAATTTGACACTGAGGGGCTCTTGGCTAAAGCAAAGTTTCATGTTAGCTACAAAGGCAAAGCAATCAGCAAGCCCCTGCAGCAGGTTCTTGCCAACAGCTTGAGATATTTCTTGAGGCGTCCGGCAACTGAGGAATCCAGTTTTGAAGGGCATCTCTTTTGA

Protein sequence

>Msa0663630

MAMSALRLGFHFSAATDNSLRVLEKPIFCVPFLNASSGFVSTKPCYFLHKRRLLSSGTTIIPRAAAPVTDVQGGNQGETDTVPTPIVIIDQDLDPDATVVEITFGDRLGALLDTMSALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQVDVDIATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSYKGKAISKPLQQVLANSLRYFLRRPATEESSFEGHLF*