AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0607280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0607280 MtrunA17_Chr4g0039251 98.701 693 9 0 1 693 41 733 0.0 1413
Msa0607280 MtrunA17_Chr4g0039231 81.048 649 72 2 94 692 1 648 0.0 1071
Msa0607280 MtrunA17_Chr4g0039261 65.801 693 232 3 1 692 1 689 0.0 967
Msa0607280 MtrunA17_Chr6g0477811 58.372 639 263 3 33 671 47 682 0.0 757
Msa0607280 MtrunA17_Chr4g0050251 47.656 640 312 6 30 659 50 676 0.0 596
Msa0607280 MtrunA17_Chr4g0050261 45.753 671 322 7 30 659 50 719 0.0 596
Msa0607280 MtrunA17_Chr4g0050291 45.753 671 333 9 1 659 3 654 0.0 593
Msa0607280 MtrunA17_Chr4g0050221 44.623 623 323 8 26 643 6 611 0.0 538
Msa0607280 MtrunA17_Chr4g0026731 44.113 603 285 9 86 654 12 596 2.77e-172 506
Msa0607280 MtrunA17_Chr4g0050201 42.086 556 296 9 95 643 4 540 4.45e-149 444
Msa0607280 MtrunA17_Chr2g0327241 38.499 613 354 12 30 635 104 700 5.79e-128 395
Msa0607280 MtrunA17_Chr1g0208391 29.646 678 414 16 35 690 75 711 5.36e-79 266
Msa0607280 MtrunA17_Chr1g0176451 30.820 610 374 13 39 636 9 582 3.28e-78 261
Msa0607280 MtrunA17_Chr1g0213091 32.270 533 343 5 50 567 119 648 2.94e-75 257
Msa0607280 MtrunA17_Chr1g0200651 34.821 448 270 10 53 493 90 522 3.25e-71 244
Msa0607280 MtrunA17_Chr1g0176441 29.843 573 372 12 32 590 148 704 3.59e-71 246
Msa0607280 MtrunA17_Chr1g0198931 30.198 606 371 18 50 636 104 676 2.19e-70 242
Msa0607280 MtrunA17_Chr3g0102731 40.179 336 187 5 52 384 97 421 7.29e-70 239
Msa0607280 MtrunA17_Chr5g0408061 30.693 606 367 16 51 636 63 635 2.02e-69 239
Msa0607280 MtrunA17_Chr8g0384391 30.248 605 393 11 46 638 49 636 2.50e-68 236
Msa0607280 MtrunA17_Chr7g0263351 30.672 551 348 9 50 586 124 654 3.50e-68 238
Msa0607280 MtrunA17_Chr2g0316301 31.029 622 358 18 36 635 55 627 4.88e-68 235
Msa0607280 MtrunA17_Chr7g0267971 28.732 623 395 15 32 637 137 727 1.90e-67 235
Msa0607280 MtrunA17_Chr8g0359931 29.133 611 365 18 47 635 60 624 2.20e-64 225
Msa0607280 MtrunA17_Chr5g0446901 39.701 335 184 5 51 378 107 430 2.56e-64 224
Msa0607280 MtrunA17_Chr3g0130331 28.900 609 390 14 48 638 53 636 4.68e-64 224
Msa0607280 MtrunA17_Chr2g0318061 37.330 367 191 9 51 407 29 366 9.68e-64 216
Msa0607280 MtrunA17_Chr1g0202431 29.533 535 335 10 49 579 46 542 6.91e-62 218
Msa0607280 MtrunA17_Chr2g0331081 29.027 565 348 14 52 597 890 1420 5.74e-56 207
Msa0607280 MtrunA17_Chr2g0331081 26.543 648 392 19 45 637 167 785 8.80e-46 176
Msa0607280 MtrunA17_Chr2g0332241 29.433 547 325 16 53 573 856 1367 1.90e-54 202
Msa0607280 MtrunA17_Chr2g0332241 27.768 587 344 22 49 582 159 718 1.99e-44 172
Msa0607280 MtrunA17_Chr2g0332221 29.250 547 326 16 53 573 855 1366 1.23e-53 200
Msa0607280 MtrunA17_Chr2g0332221 27.226 584 351 18 49 582 159 718 1.10e-43 169
Msa0607280 MtrunA17_Chr4g0065231 26.431 594 398 12 53 638 75 637 1.41e-53 195
Msa0607280 MtrunA17_Chr7g0264441 30.108 465 274 9 47 475 273 722 3.09e-53 197
Msa0607280 MtrunA17_Chr4g0003981 28.702 547 329 17 53 573 866 1377 1.37e-52 197
Msa0607280 MtrunA17_Chr4g0003981 25.674 631 399 16 53 637 173 779 2.82e-44 171
Msa0607280 MtrunA17_Chr2g0332211 29.623 557 311 20 53 573 939 1450 1.78e-52 196
Msa0607280 MtrunA17_Chr2g0332211 27.211 588 347 20 49 585 240 797 1.16e-43 169
Msa0607280 MtrunA17_Chr3g0104621 27.769 659 393 20 36 640 35 664 3.24e-52 196
Msa0607280 MtrunA17_Chr3g0104621 26.182 550 343 18 52 574 763 1276 2.36e-44 172
Msa0607280 MtrunA17_Chr7g0262261 28.836 593 357 16 20 574 756 1321 9.94e-52 194
Msa0607280 MtrunA17_Chr7g0262261 26.412 602 374 15 53 613 133 706 2.25e-45 175
Msa0607280 MtrunA17_Chr7g0265991 25.196 639 407 15 37 640 42 644 1.48e-51 189
Msa0607280 MtrunA17_Chr1g0199471 40.856 257 144 4 33 286 501 752 1.94e-51 193
Msa0607280 MtrunA17_Chr4g0003971 28.546 564 330 14 53 584 825 1347 2.57e-51 193
Msa0607280 MtrunA17_Chr4g0003971 25.502 647 403 16 53 650 161 777 7.86e-46 176
Msa0607280 MtrunA17_Chr1g0180971 42.023 257 141 4 33 286 397 648 4.15e-51 190
Msa0607280 MtrunA17_Chr1g0148841 28.417 556 341 14 52 584 876 1397 5.95e-51 192
Msa0607280 MtrunA17_Chr1g0148841 25.183 683 435 18 52 687 165 818 1.54e-41 163
Msa0607280 MtrunA17_Chr8g0393191 42.400 250 140 3 53 300 69 316 7.04e-51 190
Msa0607280 MtrunA17_Chr8g0393191 23.659 317 214 8 347 640 502 813 1.54e-15 80.9
Msa0607280 MtrunA17_Chr8g0340651 27.256 543 334 11 52 568 904 1411 1.76e-50 190
Msa0607280 MtrunA17_Chr8g0340651 25.496 706 432 25 45 689 166 838 1.18e-43 169
Msa0607280 MtrunA17_Chr7g0262241 28.022 546 330 13 53 574 880 1386 1.82e-50 190
Msa0607280 MtrunA17_Chr7g0262241 26.299 635 390 21 53 637 162 768 1.39e-46 178
Msa0607280 MtrunA17_Chr7g0262251 27.857 560 327 14 53 574 827 1347 5.30e-50 189
Msa0607280 MtrunA17_Chr7g0262251 27.732 613 391 17 53 637 175 763 2.79e-49 187
Msa0607280 MtrunA17_Chr7g0262221 28.853 558 321 16 53 574 854 1371 3.66e-49 186
Msa0607280 MtrunA17_Chr7g0262221 24.806 645 399 17 53 637 163 781 6.61e-44 170
Msa0607280 MtrunA17_Chr7g0261971 27.338 556 340 14 53 580 875 1394 2.22e-48 184
Msa0607280 MtrunA17_Chr7g0261971 25.592 633 397 18 53 637 158 764 4.55e-43 168
Msa0607280 MtrunA17_Chr1g0148811 26.215 679 413 19 3 641 788 1418 5.36e-48 183
Msa0607280 MtrunA17_Chr1g0148811 26.877 666 399 24 49 660 148 779 3.83e-39 155
Msa0607280 MtrunA17_Chr7g0265981 25.490 612 384 13 52 632 882 1452 7.28e-48 182
Msa0607280 MtrunA17_Chr7g0265981 27.304 586 353 18 38 572 165 728 4.45e-41 162
Msa0607280 MtrunA17_Chr1g0171351 26.720 625 373 17 52 640 893 1468 1.66e-47 181
Msa0607280 MtrunA17_Chr1g0171351 25.884 707 417 24 47 688 170 834 3.66e-43 168
Msa0607280 MtrunA17_Chr7g0262231 26.852 540 344 11 53 574 883 1389 5.34e-47 180
Msa0607280 MtrunA17_Chr7g0262231 26.341 634 391 19 53 637 162 768 1.57e-45 175
Msa0607280 MtrunA17_Chr5g0411621 42.449 245 127 4 53 290 51 288 2.03e-46 176
Msa0607280 MtrunA17_Chr5g0411621 23.247 271 196 8 373 640 462 723 2.64e-12 70.1
Msa0607280 MtrunA17_Chr7g0261951 27.387 555 322 14 53 574 879 1385 5.12e-46 177
Msa0607280 MtrunA17_Chr7g0261951 25.276 633 399 18 53 637 162 768 8.57e-44 170
Msa0607280 MtrunA17_Chr7g0265961 25.481 675 402 20 45 661 170 801 9.73e-46 176
Msa0607280 MtrunA17_Chr7g0265961 25.368 611 382 13 52 640 830 1388 4.11e-40 159
Msa0607280 MtrunA17_Chr3g0138261 27.656 546 338 14 52 573 869 1381 1.53e-45 175
Msa0607280 MtrunA17_Chr3g0138261 26.316 608 367 18 53 613 166 739 1.38e-42 166
Msa0607280 MtrunA17_Chr0c20g0493841 24.653 649 422 16 53 658 168 792 3.80e-45 174
Msa0607280 MtrunA17_Chr0c20g0493841 24.353 657 410 17 13 631 808 1415 1.00e-44 173
Msa0607280 MtrunA17_Chr7g0265971 26.425 579 367 13 38 572 159 722 1.26e-44 172
Msa0607280 MtrunA17_Chr7g0265971 26.212 557 376 12 52 591 874 1412 1.98e-42 166
Msa0607280 MtrunA17_Chr4g0028621 40.856 257 144 4 33 286 491 742 1.26e-44 172
Msa0607280 MtrunA17_Chr4g0004021 26.158 669 417 18 20 635 131 775 2.17e-44 172
Msa0607280 MtrunA17_Chr4g0004021 28.899 436 268 12 53 474 863 1270 2.20e-42 166
Msa0607280 MtrunA17_Chr4g0062871 27.726 541 340 14 52 574 843 1350 2.18e-43 169
Msa0607280 MtrunA17_Chr4g0062871 25.793 694 431 21 53 692 150 813 5.17e-40 158
Msa0607280 MtrunA17_Chr1g0198291 25.461 597 350 14 52 608 893 1434 3.41e-43 168
Msa0607280 MtrunA17_Chr1g0198291 27.523 654 383 26 41 637 179 798 2.53e-40 159
Msa0607280 MtrunA17_Chr5g0429871 25.775 613 406 13 37 632 650 1230 4.20e-43 167
Msa0607280 MtrunA17_Chr5g0429871 25.660 530 316 18 95 572 20 523 8.37e-33 136
Msa0607280 MtrunA17_Chr7g0261981 25.424 649 405 19 53 652 162 780 8.49e-43 167
Msa0607280 MtrunA17_Chr7g0261981 26.364 550 308 18 53 574 861 1341 4.97e-40 158
Msa0607280 MtrunA17_Chr7g0266001 25.303 577 376 12 38 572 44 607 5.03e-40 156
Msa0607280 MtrunA17_Chr4g0069211 23.692 650 416 18 53 658 167 780 1.80e-38 153
Msa0607280 MtrunA17_Chr4g0069211 35.407 209 132 2 42 248 835 1042 8.68e-32 132
Msa0607280 MtrunA17_Chr3g0093331 37.069 232 141 4 73 300 18 248 2.40e-34 131
Msa0607280 MtrunA17_Chr7g0262321 27.174 460 282 10 48 492 563 984 5.57e-34 139
Msa0607280 MtrunA17_Chr7g0262321 22.921 541 370 14 152 675 17 527 8.08e-26 114
Msa0607280 MtrunA17_Chr6g0472481 34.518 197 126 3 53 247 13 208 5.39e-31 122
Msa0607280 MtrunA17_Chr4g0039221 96.429 56 2 0 33 88 9 64 2.66e-30 114
Msa0607280 MtrunA17_Chr7g0215001 25.366 410 215 16 200 560 1 368 8.25e-21 95.1
Msa0607280 MtrunA17_Chr7g0249091 32.171 258 128 11 37 267 87 324 3.55e-19 89.7
Msa0607280 MtrunA17_Chr4g0047831 52.564 78 37 0 174 251 6 83 9.59e-19 81.6
Msa0607280 MtrunA17_Chr4g0050191 64.815 54 17 1 33 86 41 92 5.05e-15 71.6
Msa0607280 MtrunA17_Chr7g0257321 59.259 54 19 1 33 86 3 53 2.38e-14 68.2
Msa0607280 MtrunA17_Chr6g0452071 32.243 214 130 8 49 253 226 433 1.28e-13 73.6
Msa0607280 MtrunA17_Chr1g0178481 29.245 212 129 6 52 254 395 594 3.15e-13 73.2
Msa0607280 MtrunA17_Chr6g0452111 31.776 214 131 8 49 253 1031 1238 6.90e-13 72.4
Msa0607280 MtrunA17_Chr6g0452141 30.233 215 133 8 49 253 1030 1237 8.55e-13 72.0
Msa0607280 MtrunA17_Chr6g0451881 31.944 216 128 9 49 253 1020 1227 9.29e-13 72.0
Msa0607280 MtrunA17_Chr1g0194031 32.323 198 115 8 49 238 397 583 1.30e-12 71.2
Msa0607280 MtrunA17_Chr4g0041871 31.193 218 115 11 39 238 1005 1205 1.50e-12 71.2
Msa0607280 MtrunA17_Chr4g0041871 30.804 224 138 9 49 266 356 568 2.72e-12 70.5
Msa0607280 MtrunA17_Chr4g0061601 28.241 216 141 8 49 259 400 606 1.66e-12 70.9
Msa0607280 MtrunA17_Chr7g0233901 32.338 201 103 10 63 246 384 568 1.88e-12 70.9
Msa0607280 MtrunA17_Chr7g0233901 29.515 227 140 10 49 266 1008 1223 4.08e-11 66.6
Msa0607280 MtrunA17_Chr4g0026741 52.542 59 28 0 30 88 46 104 1.92e-12 65.1
Msa0607280 MtrunA17_Chr3g0093041 25.510 196 127 6 65 254 207 389 2.98e-12 69.7
Msa0607280 MtrunA17_Chr4g0060401 25.541 231 157 7 36 262 613 832 3.39e-12 70.1
Msa0607280 MtrunA17_Chr3g0132711 25.000 196 128 6 65 254 221 403 5.49e-12 68.9
Msa0607280 MtrunA17_Chr6g0452171 30.568 229 138 10 37 253 1021 1240 6.38e-12 69.3
Msa0607280 MtrunA17_Chr3g0123411 29.630 216 137 8 49 259 918 1123 7.59e-12 68.9
Msa0607280 MtrunA17_Chr6g0452041 31.481 216 129 9 49 253 1032 1239 8.38e-12 68.9
Msa0607280 MtrunA17_Chr7g0227391 27.602 221 129 9 53 259 442 645 8.51e-12 68.6
Msa0607280 MtrunA17_Chr1g0193991 31.818 198 116 8 49 238 402 588 9.00e-12 68.9
Msa0607280 MtrunA17_Chr5g0433051 28.448 232 138 9 51 272 479 692 1.17e-11 68.2
Msa0607280 MtrunA17_Chr6g0474071 31.313 198 119 8 49 238 226 414 1.37e-11 67.4
Msa0607280 MtrunA17_Chr2g0285191 31.250 192 110 6 49 230 411 590 1.93e-11 67.8
Msa0607280 MtrunA17_Chr6g0452061 30.233 215 133 8 49 253 542 749 2.12e-11 67.4
Msa0607280 MtrunA17_Chr4g0069351 31.481 216 117 9 37 238 379 577 2.34e-11 67.4
Msa0607280 MtrunA17_Chr3g0119381 31.579 209 111 9 37 230 400 591 2.74e-11 67.4
Msa0607280 MtrunA17_Chr3g0138211 30.189 212 125 7 37 238 397 595 3.75e-11 67.0
Msa0607280 MtrunA17_Chr6g0481921 28.571 224 129 8 49 259 284 489 8.08e-11 65.9
Msa0607280 MtrunA17_Chr2g0285301 32.447 188 113 6 49 230 377 556 9.22e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0607280 AT3G21090.1 74.107 672 168 1 27 692 19 690 0.0 1071
Msa0607280 AT1G51500.1 73.284 670 175 3 27 692 18 687 0.0 1024
Msa0607280 AT1G51460.1 60.954 671 251 2 32 692 9 678 0.0 852
Msa0607280 AT1G17840.1 59.680 625 246 5 33 656 50 669 0.0 726
Msa0607280 AT2G28070.2 37.175 616 362 8 30 637 111 709 4.33e-129 399
Msa0607280 AT2G28070.1 37.175 616 362 8 30 637 111 709 4.33e-129 399
Msa0607280 AT2G01320.8 31.429 560 354 11 35 586 72 609 5.26e-83 276
Msa0607280 AT2G01320.5 31.429 560 354 11 35 586 72 609 5.26e-83 276
Msa0607280 AT2G01320.3 31.429 560 354 11 35 586 72 609 1.15e-82 277
Msa0607280 AT2G01320.2 31.429 560 354 11 35 586 72 609 1.20e-82 277
Msa0607280 AT2G01320.1 31.429 560 354 11 35 586 72 609 1.34e-82 276
Msa0607280 AT2G01320.4 31.429 560 354 11 35 586 72 609 1.34e-82 276
Msa0607280 AT2G39350.1 33.148 540 338 7 50 572 106 639 4.09e-77 262
Msa0607280 AT2G01320.7 32.618 466 288 7 35 493 72 518 6.56e-77 256
Msa0607280 AT2G01320.6 32.618 466 288 7 35 493 72 518 6.56e-77 256
Msa0607280 AT3G55090.1 32.156 538 344 5 50 572 104 635 4.95e-76 259
Msa0607280 AT3G55100.1 32.194 556 327 12 45 580 41 566 7.88e-75 254
Msa0607280 AT3G55100.2 32.194 556 327 12 45 580 41 566 7.88e-75 254
Msa0607280 AT1G31770.1 31.086 608 360 15 47 635 75 642 5.38e-74 251
Msa0607280 AT3G55110.1 30.931 569 364 9 51 611 89 636 1.09e-72 249
Msa0607280 AT2G37360.1 31.041 538 356 7 50 580 130 659 3.33e-72 249
Msa0607280 AT3G55130.1 29.781 638 387 10 51 640 97 721 3.41e-72 248
Msa0607280 AT5G13580.1 32.477 545 313 8 50 567 105 621 5.10e-72 248
Msa0607280 AT1G71960.1 32.673 606 360 22 51 636 81 658 6.20e-72 246
Msa0607280 AT5G06530.3 31.203 532 341 11 32 547 156 678 3.93e-71 245
Msa0607280 AT5G06530.2 31.203 532 341 11 32 547 156 678 1.56e-70 244
Msa0607280 AT5G06530.1 31.203 532 341 11 32 547 156 678 1.56e-70 244
Msa0607280 AT2G13610.1 29.079 619 394 11 36 636 45 636 7.07e-69 238
Msa0607280 AT3G53510.1 31.354 539 344 7 50 580 123 643 8.21e-69 239
Msa0607280 AT4G27420.1 34.848 462 247 11 47 488 60 487 1.34e-68 237
Msa0607280 AT3G25620.2 29.371 572 360 13 6 547 31 588 5.04e-68 236
Msa0607280 AT4G25750.1 30.405 592 350 15 53 635 30 568 1.00e-65 228
Msa0607280 AT5G06530.4 31.504 492 314 10 70 547 1 483 3.66e-65 224
Msa0607280 AT3G13220.1 32.203 531 327 13 51 568 104 614 3.88e-64 226
Msa0607280 AT3G25620.1 34.186 430 244 11 6 407 31 449 1.22e-63 219
Msa0607280 AT1G53270.1 29.174 593 359 13 51 638 48 584 6.31e-63 220
Msa0607280 AT5G19410.2 27.379 599 384 14 53 642 75 631 1.49e-61 217
Msa0607280 AT5G19410.1 27.379 599 384 14 53 642 66 622 1.59e-61 217
Msa0607280 AT1G15210.1 29.268 574 358 13 52 608 866 1408 9.22e-57 209
Msa0607280 AT1G15210.1 25.577 563 358 12 53 572 184 728 1.74e-39 157
Msa0607280 AT5G52860.1 29.195 596 358 17 49 635 40 580 2.77e-56 202
Msa0607280 AT1G59870.1 28.028 578 360 14 52 608 893 1435 6.98e-55 204
Msa0607280 AT1G59870.1 24.465 654 415 18 44 647 177 801 7.59e-43 167
Msa0607280 AT3G53480.1 26.993 552 361 11 37 574 860 1383 1.70e-53 200
Msa0607280 AT3G53480.1 26.029 680 394 27 53 665 189 826 7.88e-46 177
Msa0607280 AT3G30842.1 30.129 541 325 17 53 574 848 1354 2.15e-52 196
Msa0607280 AT3G30842.1 26.748 572 331 21 53 566 161 702 6.03e-43 168
Msa0607280 AT1G15520.1 27.899 552 327 15 53 573 852 1363 2.17e-52 196
Msa0607280 AT1G15520.1 27.740 584 341 18 41 572 159 713 1.07e-46 179
Msa0607280 AT2G37010.2 30.172 464 277 11 33 468 484 928 2.29e-52 196
Msa0607280 AT2G37010.1 30.172 464 277 11 33 468 484 928 2.29e-52 196
Msa0607280 AT1G53390.1 28.620 587 344 16 33 572 507 1065 2.93e-52 196
Msa0607280 AT3G16340.2 27.402 562 354 14 52 589 835 1366 2.98e-51 193
Msa0607280 AT3G16340.2 26.995 589 342 17 33 567 142 696 7.96e-45 174
Msa0607280 AT4G15230.3 26.384 614 385 16 47 637 821 1390 3.07e-51 193
Msa0607280 AT4G15230.3 24.373 718 436 25 22 674 120 795 4.25e-49 186
Msa0607280 AT4G15230.1 26.384 614 385 16 47 637 821 1390 3.07e-51 193
Msa0607280 AT4G15230.1 24.373 718 436 25 22 674 120 795 4.25e-49 186
Msa0607280 AT4G15230.4 26.384 614 385 16 47 637 742 1311 3.73e-51 192
Msa0607280 AT4G15230.4 24.373 718 436 25 22 674 41 716 3.75e-49 187
Msa0607280 AT3G16340.1 27.402 562 354 14 52 589 840 1371 4.30e-51 192
Msa0607280 AT3G16340.1 26.871 588 349 15 33 567 142 701 2.54e-46 178
Msa0607280 AT2G29940.1 28.276 580 359 16 52 607 852 1398 6.07e-51 192
Msa0607280 AT2G29940.1 27.551 588 343 16 38 572 163 720 2.44e-49 187
Msa0607280 AT4G15230.2 24.373 718 436 25 22 674 120 795 4.85e-49 186
Msa0607280 AT4G15230.2 27.829 539 326 15 47 563 821 1318 7.94e-49 186
Msa0607280 AT4G15215.8 27.656 546 344 16 47 574 808 1320 8.68e-49 186
Msa0607280 AT4G15215.8 24.051 711 440 22 22 674 114 782 2.10e-43 169
Msa0607280 AT4G15215.10 27.656 546 344 16 47 574 808 1320 8.68e-49 186
Msa0607280 AT4G15215.10 24.051 711 440 22 22 674 114 782 2.10e-43 169
Msa0607280 AT4G15215.6 27.656 546 344 16 47 574 808 1320 8.68e-49 186
Msa0607280 AT4G15215.6 24.051 711 440 22 22 674 114 782 2.10e-43 169
Msa0607280 AT4G15215.7 27.656 546 344 16 47 574 808 1320 8.68e-49 186
Msa0607280 AT4G15215.7 24.051 711 440 22 22 674 114 782 2.10e-43 169
Msa0607280 AT4G15215.9 27.523 545 346 15 47 574 815 1327 9.28e-49 186
Msa0607280 AT4G15215.9 23.769 711 449 21 22 674 114 789 8.78e-44 170
Msa0607280 AT4G15215.4 27.523 545 346 15 47 574 815 1327 9.28e-49 186
Msa0607280 AT4G15215.4 23.769 711 449 21 22 674 114 789 8.78e-44 170
Msa0607280 AT4G15215.5 27.523 545 346 15 47 574 815 1327 9.28e-49 186
Msa0607280 AT4G15215.5 23.769 711 449 21 22 674 114 789 8.78e-44 170
Msa0607280 AT4G15215.3 27.523 545 346 15 47 574 815 1327 9.28e-49 186
Msa0607280 AT4G15215.3 23.769 711 449 21 22 674 114 789 8.78e-44 170
Msa0607280 AT4G15215.2 27.523 545 346 15 47 574 815 1327 9.28e-49 186
Msa0607280 AT4G15215.2 23.769 711 449 21 22 674 114 789 8.78e-44 170
Msa0607280 AT4G15215.1 27.656 546 344 16 47 574 811 1323 9.87e-49 185
Msa0607280 AT4G15215.1 24.051 711 440 22 22 674 117 785 1.91e-43 169
Msa0607280 AT4G15215.11 27.523 545 346 15 47 574 818 1330 1.04e-48 185
Msa0607280 AT4G15215.11 23.769 711 449 21 22 674 117 792 8.48e-44 170
Msa0607280 AT4G15236.1 26.930 583 353 21 47 600 811 1349 1.60e-48 185
Msa0607280 AT4G15236.1 24.408 676 412 23 44 659 143 779 9.41e-42 164
Msa0607280 AT2G37280.2 24.741 675 419 20 22 637 114 758 1.84e-48 184
Msa0607280 AT2G37280.2 25.981 535 351 10 37 557 823 1326 2.04e-47 181
Msa0607280 AT2G37280.1 25.000 636 397 18 52 637 153 758 2.33e-48 184
Msa0607280 AT2G37280.1 25.906 552 365 11 37 573 823 1345 4.62e-48 183
Msa0607280 AT2G37280.3 25.906 552 365 11 37 573 852 1374 3.50e-48 184
Msa0607280 AT2G37280.3 23.427 747 446 24 22 680 114 822 1.55e-44 172
Msa0607280 AT2G37280.4 25.933 536 354 10 52 573 681 1187 5.16e-48 183
Msa0607280 AT2G37280.4 24.143 671 411 21 65 680 8 635 5.72e-45 174
Msa0607280 AT4G15233.8 26.476 593 343 21 47 600 804 1342 1.40e-47 182
Msa0607280 AT4G15233.8 24.522 628 382 22 66 637 159 750 5.36e-38 152
Msa0607280 AT4G15233.1 26.476 593 343 21 47 600 813 1351 1.48e-47 182
Msa0607280 AT4G15233.1 24.885 655 398 23 39 637 143 759 2.44e-42 166
Msa0607280 AT4G15233.3 26.476 593 343 21 47 600 751 1289 1.53e-47 182
Msa0607280 AT4G15233.3 24.885 655 398 23 39 637 81 697 2.93e-42 166
Msa0607280 AT4G15233.6 26.476 593 343 21 47 600 751 1289 1.53e-47 182
Msa0607280 AT4G15233.6 24.885 655 398 23 39 637 81 697 2.93e-42 166
Msa0607280 AT4G15233.7 26.476 593 343 21 47 600 795 1333 1.79e-47 181
Msa0607280 AT4G15233.7 25.589 637 398 23 39 637 143 741 5.30e-45 174
Msa0607280 AT2G26910.1 27.799 536 340 13 52 568 844 1351 2.62e-47 181
Msa0607280 AT2G26910.1 25.360 694 419 23 46 680 143 796 9.81e-41 161
Msa0607280 AT1G15520.2 26.348 649 394 19 41 637 159 775 6.65e-47 180
Msa0607280 AT1G15520.2 29.613 439 252 13 53 469 852 1255 2.44e-42 166
Msa0607280 AT5G60740.1 40.146 274 149 6 33 303 499 760 1.59e-46 178
Msa0607280 AT4G15233.2 27.206 544 312 19 47 557 813 1305 1.20e-45 176
Msa0607280 AT4G15233.2 24.885 655 398 23 39 637 143 759 2.20e-42 166
Msa0607280 AT4G15233.5 25.585 641 401 23 39 641 81 683 2.94e-45 175
Msa0607280 AT4G15233.5 26.034 580 348 19 54 600 677 1208 6.71e-45 174
Msa0607280 AT4G15233.4 25.585 641 401 23 39 641 81 683 2.94e-45 175
Msa0607280 AT4G15233.4 26.034 580 348 19 54 600 677 1208 6.71e-45 174
Msa0607280 AT1G66950.1 26.930 583 325 21 47 583 874 1401 1.55e-43 169
Msa0607280 AT1G66950.1 26.889 569 355 15 49 572 182 734 7.54e-41 161
Msa0607280 AT2G36380.1 26.667 555 338 16 47 574 873 1385 5.11e-43 168
Msa0607280 AT2G36380.1 25.569 571 360 17 49 572 180 732 3.83e-38 153
Msa0607280 AT3G21080.1 50.340 147 64 3 510 651 105 247 7.51e-37 139
Msa0607280 AT5G61700.2 25.118 211 141 5 30 234 592 791 2.72e-16 83.6
Msa0607280 AT5G61700.4 25.118 211 141 5 30 234 592 791 2.72e-16 83.6
Msa0607280 AT5G61700.1 25.105 239 160 7 30 262 592 817 7.05e-15 79.3
Msa0607280 AT5G61740.3 26.596 188 121 5 30 211 445 621 9.48e-14 75.5
Msa0607280 AT5G61740.1 26.596 188 121 5 30 211 584 760 1.10e-13 75.5
Msa0607280 AT5G61740.2 26.596 188 121 5 30 211 550 726 1.14e-13 75.1
Msa0607280 AT5G39040.1 31.019 216 135 8 49 259 409 615 4.25e-13 73.2
Msa0607280 AT3G47760.1 23.431 239 164 7 30 262 571 796 9.82e-13 72.4
Msa0607280 AT1G70610.2 30.081 246 143 10 53 286 291 519 9.84e-13 71.6
Msa0607280 AT3G47760.3 23.431 239 164 7 30 262 611 836 1.13e-12 72.0
Msa0607280 AT3G47740.1 23.176 233 160 6 36 262 613 832 1.36e-12 71.6
Msa0607280 AT3G47760.2 23.431 239 164 7 30 262 581 806 1.45e-12 71.6
Msa0607280 AT1G70610.1 30.081 246 143 10 53 286 472 700 1.64e-12 71.2
Msa0607280 AT3G47750.1 22.747 233 161 7 36 262 618 837 2.13e-12 71.2
Msa0607280 AT4G28630.1 26.829 246 154 10 29 266 433 660 2.49e-12 70.9
Msa0607280 AT4G28620.1 27.731 238 148 8 29 259 435 655 2.63e-12 70.5
Msa0607280 AT3G47780.1 24.034 233 158 7 36 262 616 835 2.78e-12 70.9
Msa0607280 AT4G18050.1 31.606 193 108 6 49 230 368 547 2.92e-12 70.9
Msa0607280 AT4G18050.2 31.606 193 108 6 49 230 378 557 3.03e-12 70.9
Msa0607280 AT3G47790.1 20.949 253 185 5 14 262 567 808 3.48e-12 70.5
Msa0607280 AT2G47000.4 31.313 198 117 9 49 238 397 583 3.56e-12 70.5
Msa0607280 AT2G47000.3 31.313 198 117 9 49 238 397 583 4.03e-12 70.5
Msa0607280 AT2G47000.7 31.313 198 117 9 49 238 397 583 4.03e-12 70.5
Msa0607280 AT5G58270.1 28.319 226 137 8 44 259 485 695 4.08e-12 70.1
Msa0607280 AT2G47000.2 31.313 198 117 9 49 238 397 583 4.98e-12 70.1
Msa0607280 AT3G47790.3 21.525 223 162 4 14 232 567 780 5.06e-12 69.7
Msa0607280 AT3G47790.2 21.525 223 162 4 14 232 448 661 5.28e-12 69.7
Msa0607280 AT2G47000.6 31.313 198 117 9 49 238 397 583 6.48e-12 69.7
Msa0607280 AT2G47000.5 31.313 198 117 9 49 238 397 583 6.48e-12 69.7
Msa0607280 AT2G47000.1 31.313 198 117 9 49 238 397 583 6.48e-12 69.7
Msa0607280 AT3G47730.1 26.020 196 124 7 65 253 558 739 1.47e-11 68.6
Msa0607280 AT2G36910.1 32.487 197 116 8 49 238 381 567 2.00e-11 68.2
Msa0607280 AT4G25960.1 31.674 221 126 10 49 259 414 619 2.29e-11 68.2
Msa0607280 AT4G25450.1 31.064 235 134 12 49 272 483 700 3.00e-11 67.4
Msa0607280 AT3G47770.1 23.077 221 151 6 48 262 599 806 3.32e-11 67.4
Msa0607280 AT4G25450.3 31.064 235 134 12 49 272 314 531 4.08e-11 66.6
Msa0607280 AT3G47770.2 23.077 221 151 6 48 262 625 832 4.93e-11 66.6
Msa0607280 AT1G10680.2 32.178 202 110 10 49 238 374 560 4.96e-11 67.0
Msa0607280 AT1G10680.1 32.178 202 110 10 49 238 374 560 5.24e-11 66.6
Msa0607280 AT5G61690.2 28.283 198 117 8 65 253 559 740 7.66e-11 66.2

Find 152 sgRNAs with CRISPR-Local

Find 441 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGATCCTTTCATGAATT+TGG 0.135560 4_2:+54071675 Msa0607280:CDS
ATGAAAGGATCTGCTGAATT+TGG 0.146252 4_2:-54071667 None:intergenic
ATGATTCCCATGAGAAAATT+TGG 0.154614 4_2:-54073079 None:intergenic
TTGAGAAAAGACCTTCTTTC+AGG 0.175896 4_2:+54074481 Msa0607280:CDS
TCTTTCATCATTCCCGTTCT+TGG 0.177169 4_2:+54072910 Msa0607280:CDS
AGAGTTATGTTGCCAAATTT+TGG 0.179448 4_2:+54067093 Msa0607280:CDS
GTTGGTCCTTTCCCAAAATT+TGG 0.179855 4_2:-54067105 None:intergenic
GATGGGAGAGTTTAATGTTT+TGG 0.188563 4_2:-54066769 None:intergenic
TCCTCCTTCTCTTATGTTAC+AGG 0.190030 4_2:+54074373 Msa0607280:CDS
ACATATTCTCCTGTCAGTTT+TGG 0.195140 4_2:-54074288 None:intergenic
AGTATTAGTTTATATGTATA+GGG 0.201229 4_2:+54074709 Msa0607280:three_prime_UTR
TTGATTAGGTACAGCATTAA+TGG 0.237104 4_2:+54066827 Msa0607280:five_prime_UTR
AGGTTGCTTAATGGACTAAA+TGG 0.247817 4_2:+54067132 Msa0607280:CDS
TAAGCCGCTGATTTCTTCTT+TGG 0.253209 4_2:-54070517 None:intergenic
AGTGGCGAAACTGTTTATTT+TGG 0.268980 4_2:+54070840 Msa0607280:CDS
TGGTAGAATCATGGCTATTA+TGG 0.271739 4_2:+54067167 Msa0607280:CDS
GGATAGCGCCAAACAGGTTT+TGG 0.292187 4_2:-54073256 None:intergenic
TTTCTCATGGGAATCATTAC+AGG 0.293620 4_2:+54073085 Msa0607280:CDS
AAGCTGTTGTATGGTTCTTT+TGG 0.296775 4_2:-54074460 None:intergenic
TGATGACCTCTGGATTCTTT+AGG 0.298220 4_2:+54073218 Msa0607280:CDS
CCAACTAAAAGGTTGCTTAA+TGG 0.302201 4_2:+54067123 Msa0607280:CDS
TAGTATTAGTTTATATGTAT+AGG 0.306672 4_2:+54074708 Msa0607280:three_prime_UTR
AGTCAGAATTGATGCATCTT+AGG 0.307460 4_2:-54071219 None:intergenic
AAATGGAACATTTGTGTCCT+TGG 0.318835 4_2:+54074767 Msa0607280:three_prime_UTR
CATATAACATGGTGAAATTC+AGG 0.319419 4_2:+54072963 Msa0607280:CDS
CCGTAACTGATATATGAAAT+TGG 0.321146 4_2:-54073277 None:intergenic
TTGGGAAAGGACCAACTAAA+AGG 0.333669 4_2:+54067112 Msa0607280:CDS
TGCCATCTGTTACTACTTCC+AGG 0.334733 4_2:+54074508 Msa0607280:CDS
TGATGCAACAATCATTGAAA+TGG 0.335549 4_2:+54070542 Msa0607280:CDS
GAAAGAATGAATGGATATTA+TGG 0.336869 4_2:+54072860 Msa0607280:CDS
GCCTGTGGTGCATTTATATC+AGG 0.340620 4_2:+54072166 Msa0607280:CDS
ACTTTGCTTGATACACTTGC+AGG 0.353311 4_2:+54067213 Msa0607280:CDS
CATCAGGTTAGAGCTTTGTT+TGG 0.358461 4_2:+54074867 Msa0607280:three_prime_UTR
CTTTGTTGTTCTCAAGTTCA+AGG 0.363353 4_2:+54074404 Msa0607280:CDS
TTTATGACTTTCATGTCAAT+TGG 0.367206 4_2:+54072190 Msa0607280:CDS
TTCCATGTAACTGTTTGATT+AGG 0.374845 4_2:+54066813 Msa0607280:five_prime_UTR
TATGTGATAACACACATGTT+AGG 0.376135 4_2:+54074306 Msa0607280:CDS
GACTGTGCAGATAGGTTAAT+AGG 0.377572 4_2:+54070573 Msa0607280:CDS
GTTATATAATTGAATTCTGC+TGG 0.378832 4_2:+54074626 Msa0607280:three_prime_UTR
TTCATTTCTTCAATAAAAGA+TGG 0.384010 4_2:-54072220 None:intergenic
CTGATCTTCCAAAACCTGTT+TGG 0.390665 4_2:+54073248 Msa0607280:CDS
ACAGGAAATGTTCTTCTCAA+TGG 0.391733 4_2:+54070282 Msa0607280:CDS
CAGATAGGTTAATAGGTAAC+TGG 0.395360 4_2:+54070580 Msa0607280:CDS
TCTTCTTTGGACATTGTTGA+TGG 0.414148 4_2:-54070504 None:intergenic
ATGGCTATTATGGGTCCTTC+TGG 0.416172 4_2:+54067177 Msa0607280:CDS
GCTCTAACCTGATGCTGATA+AGG 0.417327 4_2:-54074858 None:intergenic
CCATTCCAAGTGGTGGGACT+TGG 0.425020 4_2:+54074341 Msa0607280:CDS
TTACGGTGCATGGGCGATAC+AGG 0.428031 4_2:+54073294 Msa0607280:CDS
ATTATGGGTCCTTCTGGCTC+TGG 0.429652 4_2:+54067183 Msa0607280:CDS
GGTAGAATCATGGCTATTAT+GGG 0.431697 4_2:+54067168 Msa0607280:CDS
TTATGAAGAGAGAGAAAAGA+TGG 0.433076 4_2:-54066787 None:intergenic
TGATGAACCGACTAGTGGTT+TGG 0.434110 4_2:+54070686 Msa0607280:CDS
GTCCTAGCCTTATCAGCATC+AGG 0.435327 4_2:+54074851 Msa0607280:three_prime_UTR
GAAATTGGATAGCGCCAAAC+AGG 0.438877 4_2:-54073262 None:intergenic
CTACGGCTACACTTCCATCT+TGG 0.441109 4_2:+54072135 Msa0607280:CDS
CAGGAAATGTTCTTCTCAAT+GGG 0.444946 4_2:+54070283 Msa0607280:CDS
CATATATCAGTTACGGTGCA+TGG 0.450064 4_2:+54073284 Msa0607280:CDS
CCAATTTCATATATCAGTTA+CGG 0.456412 4_2:+54073277 Msa0607280:CDS
ATGGGAATCATTACAGGAGC+TGG 0.460308 4_2:+54073091 Msa0607280:CDS
TTTACGTGGACAAGGGAAAC+CGG 0.461223 4_2:-54071176 None:intergenic
ATAAGAAAAGAAATCTAGAA+TGG 0.461570 4_2:-54066876 None:intergenic
GATGCAACAATCATTGAAAT+GGG 0.469400 4_2:+54070543 Msa0607280:CDS
GTTGCTTCCACCAACTAGCT+TGG 0.469934 4_2:-54071991 None:intergenic
ACGCAAGAAGATGTGTTGTT+AGG 0.470386 4_2:+54070432 Msa0607280:CDS
TGCTGAGCCTGGTAGAATCA+TGG 0.476639 4_2:+54067158 Msa0607280:CDS
TCAATCTCCATGTTGTTATG+TGG 0.477967 4_2:-54066967 None:intergenic
GAGCAATAGCAACCAAGAAC+GGG 0.478605 4_2:-54072922 None:intergenic
ACCAACTAGCTTGGCTTCCA+AGG 0.481452 4_2:-54071982 None:intergenic
ATGACTTTCATGTCAATTGG+AGG 0.485960 4_2:+54072193 Msa0607280:CDS
CCAAGTCCCACCACTTGGAA+TGG 0.495424 4_2:-54074341 None:intergenic
TTTGGGTTACCTGGGAGTAG+TGG 0.496541 4_2:-54074270 None:intergenic
ATGTGATAACACACATGTTA+GGG 0.497145 4_2:+54074307 Msa0607280:CDS
TTGAGATTCTCACAAGGCCT+CGG 0.498086 4_2:+54070652 Msa0607280:CDS
TGCTGCCAAGTCCCACCACT+TGG 0.499759 4_2:-54074346 None:intergenic
GCATATTGTGGTCTTAATAG+AGG 0.502246 4_2:+54067045 Msa0607280:CDS
GGAATCATGATGATGACCTC+TGG 0.502637 4_2:+54073208 Msa0607280:CDS
ATCATTGTATCTATATGTGT+TGG 0.504900 4_2:+54072091 Msa0607280:CDS
GTGAACATGTGTAGAGATGT+TGG 0.507536 4_2:+54072040 Msa0607280:CDS
ATGAAGGGGTTGATGCCTCC+TGG 0.517928 4_2:-54074526 None:intergenic
ACAGGCACCACGAGCCAAGA+TGG 0.518793 4_2:-54072149 None:intergenic
TTCTGACTTTGACGTTGTAA+CGG 0.522158 4_2:+54071234 Msa0607280:CDS
ACCTTGGAAGCCAAGCTAGT+TGG 0.522711 4_2:+54071981 Msa0607280:CDS
GTAGAGATGTTGGTTACTAC+TGG 0.523631 4_2:+54072050 Msa0607280:CDS
GTATTAGTTTATATGTATAG+GGG 0.523840 4_2:+54074710 Msa0607280:three_prime_UTR
TTGGAAGCCAAGCTAGTTGG+TGG 0.528421 4_2:+54071984 Msa0607280:CDS
CTTGAAACTGAGATAAACCT+TGG 0.528878 4_2:+54071965 Msa0607280:CDS
TATGAAGAGAGAGAAAAGAT+GGG 0.530949 4_2:-54066786 None:intergenic
TACCTAATCAAACAGTTACA+TGG 0.532226 4_2:-54066815 None:intergenic
CTTGAGAAGATAGTGAATGA+AGG 0.536692 4_2:-54074542 None:intergenic
TCCTGATATAAATGCACCAC+AGG 0.540257 4_2:-54072167 None:intergenic
TTGAGAAGATAGTGAATGAA+GGG 0.544490 4_2:-54074541 None:intergenic
AGAGCAATAGCAACCAAGAA+CGG 0.544729 4_2:-54072923 None:intergenic
ATCTTGGCTCGTGGTGCCTG+TGG 0.547250 4_2:+54072151 Msa0607280:CDS
AACGCATAGTGAATGAATCC+TGG 0.547925 4_2:-54072986 None:intergenic
CGTTGTAACGGCTACACTGA+AGG 0.548225 4_2:+54071246 Msa0607280:CDS
CTTAGAAATTGTGCTCGTGA+TGG 0.549034 4_2:+54070741 Msa0607280:CDS
ATATATCAGTTACGGTGCAT+GGG 0.552581 4_2:+54073285 Msa0607280:CDS
ATAGAGGAAGCTTCTTAGCA+TGG 0.554454 4_2:+54067061 Msa0607280:CDS
TAGAGGAAGCTTCTTAGCAT+GGG 0.556492 4_2:+54067062 Msa0607280:CDS
AATTAAGCCATTCCAAGTGG+TGG 0.556493 4_2:+54074334 Msa0607280:CDS
CTTACAACAAAACCATAGCC+TGG 0.557488 4_2:-54070318 None:intergenic
GAAATTGTGCTCGTGATGGA+AGG 0.559639 4_2:+54070745 Msa0607280:CDS
CCAGGTAACCCAAAACTGAC+AGG 0.560140 4_2:+54074279 Msa0607280:CDS
TCATACAAGAATGACTTGCT+TGG 0.561045 4_2:+54074234 Msa0607280:CDS
TTAACCTATCTGCACAGTCA+TGG 0.561627 4_2:-54070569 None:intergenic
AGCGTTCAACGTATGCCAGA+AGG 0.563888 4_2:+54071737 Msa0607280:CDS
GTCTCCATGACTGTGCAGAT+AGG 0.568429 4_2:+54070565 Msa0607280:CDS
GAGTTTGATCCACTACTCCC+AGG 0.569657 4_2:+54074261 Msa0607280:CDS
GAGGTATAAGTGGTGGCGAA+AGG 0.574362 4_2:+54070610 Msa0607280:CDS
AACATGGTGAAATTCAGGCC+AGG 0.575455 4_2:+54072968 Msa0607280:CDS
TTCCTTGATGAACCGACTAG+TGG 0.581117 4_2:+54070681 Msa0607280:CDS
TGTGGTTGTTCTTCTAGGTG+TGG 0.582611 4_2:-54074584 None:intergenic
GTTGTAACGGCTACACTGAA+GGG 0.582706 4_2:+54071247 Msa0607280:CDS
TGGCATTTGAGAGGTATAAG+TGG 0.586145 4_2:+54070600 Msa0607280:CDS
TGCAAGTGTATCAAGCAAAG+TGG 0.586411 4_2:-54067211 None:intergenic
ATGTTGGTTACTACTGGCTG+AGG 0.586749 4_2:+54072056 Msa0607280:CDS
CATTCACTATCTTCTCAAGA+GGG 0.586786 4_2:+54074546 Msa0607280:CDS
CATCTTAGGAAATGATCAGA+AGG 0.591308 4_2:-54071205 None:intergenic
TTGTTCTTCTAGGTGTGGAG+TGG 0.591347 4_2:-54074579 None:intergenic
ATTAAGCCATTCCAAGTGGT+GGG 0.591525 4_2:+54074335 Msa0607280:CDS
AACCACTAGTCGGTTCATCA+AGG 0.591779 4_2:-54070683 None:intergenic
TCCTGTAACATAAGAGAAGG+AGG 0.591821 4_2:-54074374 None:intergenic
TCATTCACTATCTTCTCAAG+AGG 0.594906 4_2:+54074545 Msa0607280:CDS
GCGTTCAACGTATGCCAGAA+GGG 0.602784 4_2:+54071738 Msa0607280:CDS
TACACTTCCATCTTGGCTCG+TGG 0.602988 4_2:+54072142 Msa0607280:CDS
CTCCTGGAAGTAGTAACAGA+TGG 0.608454 4_2:-54074510 None:intergenic
AGTGCAAAGACTTCACTGCT+AGG 0.611217 4_2:-54070792 None:intergenic
ATAGGTAACTGGCATTTGAG+AGG 0.611647 4_2:+54070591 Msa0607280:CDS
GCTGTAGCCAAATTCATGAA+AGG 0.611893 4_2:-54071682 None:intergenic
ATATCCTGTAACATAAGAGA+AGG 0.613354 4_2:-54074377 None:intergenic
AGTGATGAGGAAGCATATTG+TGG 0.621490 4_2:+54067033 Msa0607280:CDS
ATAATAGCCATGATTCTACC+AGG 0.623399 4_2:-54067165 None:intergenic
AACCTGATGCTGATAAGGCT+AGG 0.629728 4_2:-54074853 None:intergenic
CAACAACAAAGGATGCAACA+TGG 0.635595 4_2:+54067005 Msa0607280:CDS
CAACATGGACGAGAGTGATG+AGG 0.639956 4_2:+54067020 Msa0607280:CDS
TTGAATTAAGCCATTCCAAG+TGG 0.642469 4_2:+54074331 Msa0607280:CDS
TGAAGCTAAAATGGCAATCG+AGG 0.650043 4_2:+54070863 Msa0607280:CDS
TGAGAAGATAGTGAATGAAG+GGG 0.657426 4_2:-54074540 None:intergenic
ATGGAGATTGAAGCAGCAAG+TGG 0.658880 4_2:+54066979 Msa0607280:CDS
AGCAACTCAAAACACTGACA+AGG 0.665776 4_2:+54072008 Msa0607280:CDS
CATTTGAGAGGTATAAGTGG+TGG 0.666459 4_2:+54070603 Msa0607280:CDS
AGTGATTGAGAGTCTCATGA+TGG 0.667256 4_2:+54073039 Msa0607280:CDS
CTACACTGAAGGGATCTCAA+AGG 0.667394 4_2:+54071257 Msa0607280:CDS
TTGCACTTGAGATTCTCACA+AGG 0.675435 4_2:+54070646 Msa0607280:CDS
TTGCACAATCACATATAACA+TGG 0.677547 4_2:+54072952 Msa0607280:CDS
GCACTGTCCAAACCACTAGT+CGG 0.680827 4_2:-54070693 None:intergenic
GCAAGTGGTAGCAACAACAA+AGG 0.683774 4_2:+54066994 Msa0607280:CDS
TAGCAACCTAAAGAATCCAG+AGG 0.696592 4_2:-54073224 None:intergenic
ATGTCCAAAGAAGAAATCAG+CGG 0.710305 4_2:+54070513 Msa0607280:CDS
TCATCAAGGAACAGTAACCG+AGG 0.728662 4_2:-54070669 None:intergenic
TTCAAATCCACATAACAACA+TGG 0.739587 4_2:+54066960 Msa0607280:exon
CATCTGTTACTACTTCCAGG+AGG 0.782086 4_2:+54074511 Msa0607280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATATTATAAGACAAT+TGG + chr4_2:54068214-54068233 Msa0607280:intron 10.0%
!! TACATTTAAAAATTTATAGA+TGG + chr4_2:54068564-54068583 Msa0607280:intron 10.0%
!!! ATCTTTATGATATTAAATTT+TGG + chr4_2:54068981-54069000 Msa0607280:intron 10.0%
!!! TTATTTAGAATTTTATTTCA+TGG - chr4_2:54069545-54069564 None:intergenic 10.0%
!!! TTTTAAGTTTAGTTTATATT+TGG + chr4_2:54069613-54069632 Msa0607280:intron 10.0%
!!! ACAAATTCTTTTATTCAATT+AGG + chr4_2:54067439-54067458 Msa0607280:intron 15.0%
!! TAATTAAATGTACCAAAAAT+TGG + chr4_2:54067470-54067489 Msa0607280:intron 15.0%
!! ATTAACAAACATTACAATTA+TGG + chr4_2:54067684-54067703 Msa0607280:intron 15.0%
!! AATCCAATTATAATTTAACT+AGG + chr4_2:54067903-54067922 Msa0607280:intron 15.0%
!! ATCCAATTATAATTTAACTA+GGG + chr4_2:54067904-54067923 Msa0607280:intron 15.0%
!!! ATATGAGCAAATTATTTTTA+GGG - chr4_2:54067975-54067994 None:intergenic 15.0%
!!! AATATGAGCAAATTATTTTT+AGG - chr4_2:54067976-54067995 None:intergenic 15.0%
!!! AATGTTTTTTTTTCTTTCTT+AGG + chr4_2:54068013-54068032 Msa0607280:intron 15.0%
!!! ATGTTTTTTTTTCTTTCTTA+GGG + chr4_2:54068014-54068033 Msa0607280:intron 15.0%
!! ATAAAATACTCCTATATTAA+AGG - chr4_2:54068090-54068109 None:intergenic 15.0%
!! CTTTCTTATATCATTTATTA+AGG - chr4_2:54068358-54068377 None:intergenic 15.0%
!! AATAGAGTAATAAATAGTTA+AGG + chr4_2:54068399-54068418 Msa0607280:intron 15.0%
!! ATAAATAGTTAAGGATATAT+AGG + chr4_2:54068408-54068427 Msa0607280:intron 15.0%
!!! AAAGATTTGGAAATAAATTT+TGG - chr4_2:54068923-54068942 None:intergenic 15.0%
!!! TTTATGATATTAAATTTTGG+TGG + chr4_2:54068984-54069003 Msa0607280:intron 15.0%
!!! ATTTTCTTTTATAATAGAGA+CGG + chr4_2:54069220-54069239 Msa0607280:intron 15.0%
!!! ACATATTTGTAATGATTTTT+TGG + chr4_2:54069574-54069593 Msa0607280:intron 15.0%
!! AATTACTAAATAATACATAC+AGG - chr4_2:54071286-54071305 None:intergenic 15.0%
!! TAACAAAATCAATATTATGA+AGG - chr4_2:54071921-54071940 None:intergenic 15.0%
!! AATGTAAAGTGTATTATATT+TGG + chr4_2:54073404-54073423 Msa0607280:intron 15.0%
!!! GTGTTTTCAATTTAAATAAT+TGG - chr4_2:54073970-54073989 None:intergenic 15.0%
!! AATGCTAATTAATATGAATT+TGG + chr4_2:54074202-54074221 Msa0607280:intron 15.0%
!!! ATATATATTTCTCTTTTTTG+TGG - chr4_2:54074605-54074624 None:intergenic 15.0%
!!! TAGTATTAGTTTATATGTAT+AGG + chr4_2:54074708-54074727 Msa0607280:three_prime_UTR 15.0%
!!! AGTATTAGTTTATATGTATA+GGG + chr4_2:54074709-54074728 Msa0607280:three_prime_UTR 15.0%
!!! TTTTTAAAAAATGTAATCCA+AGG - chr4_2:54074787-54074806 None:intergenic 15.0%
!! ATAAGAAAAGAAATCTAGAA+TGG - chr4_2:54066879-54066898 None:intergenic 20.0%
!!! AACCAAAATATCATGTTTTT+TGG + chr4_2:54067359-54067378 Msa0607280:intron 20.0%
!!! TTCCAAAAAACATGATATTT+TGG - chr4_2:54067364-54067383 None:intergenic 20.0%
!! GAAACTATCAAACTAATAAA+AGG - chr4_2:54067404-54067423 None:intergenic 20.0%
!! TTATGGGAAGAATAATATTA+AGG + chr4_2:54067929-54067948 Msa0607280:intron 20.0%
!! AGTAACATTAAAGTTTCATT+TGG + chr4_2:54068434-54068453 Msa0607280:intron 20.0%
!! TTTCATTTGGTATTGTAAAA+CGG + chr4_2:54068447-54068466 Msa0607280:intron 20.0%
!! AAGATATAAGATAAGGAAAA+GGG - chr4_2:54068725-54068744 None:intergenic 20.0%
!! AAAGATATAAGATAAGGAAA+AGG - chr4_2:54068726-54068745 None:intergenic 20.0%
!!! TATTAACTTGTTCTTTTCAA+TGG - chr4_2:54068954-54068973 None:intergenic 20.0%
!!! TAACTTATGGATTTTGAAAA+GGG + chr4_2:54069049-54069068 Msa0607280:intron 20.0%
!! GATGCATTTAATCTATATTA+AGG - chr4_2:54069174-54069193 None:intergenic 20.0%
!!! TTTTCTTTTATAATAGAGAC+GGG + chr4_2:54069221-54069240 Msa0607280:intron 20.0%
!! TTATGAAGGTAATGAAATAT+AGG - chr4_2:54069290-54069309 None:intergenic 20.0%
!!! AGATCTTAGTTTAGATTTTA+AGG + chr4_2:54069350-54069369 Msa0607280:intron 20.0%
!!! ATTTGGAGATATTTTTTTTG+AGG + chr4_2:54069630-54069649 Msa0607280:intron 20.0%
!! TGGTAATTATTATCAACTTA+CGG - chr4_2:54069888-54069907 None:intergenic 20.0%
!!! TTGAATTTGATAATTGATCA+TGG - chr4_2:54069908-54069927 None:intergenic 20.0%
!! CTAAATATAAATGCTTACAT+TGG - chr4_2:54071791-54071810 None:intergenic 20.0%
!! TTCATTTCTTCAATAAAAGA+TGG - chr4_2:54072223-54072242 None:intergenic 20.0%
!!! ATCTTTTATTGAAGAAATGA+AGG + chr4_2:54072222-54072241 Msa0607280:CDS 20.0%
!! CAGTAATATGAGTTTATAAA+CGG + chr4_2:54072289-54072308 Msa0607280:intron 20.0%
!!! TTAACATAAGCTATTTTCAA+AGG - chr4_2:54072639-54072658 None:intergenic 20.0%
!!! TTTTATAGAGAAAGAATGAA+TGG + chr4_2:54072851-54072870 Msa0607280:CDS 20.0%
!! GAATAAGTAAGAATCAATTA+TGG + chr4_2:54073486-54073505 Msa0607280:intron 20.0%
!!! AACATAAATGACATCTTTTA+AGG + chr4_2:54073699-54073718 Msa0607280:intron 20.0%
!! AGATAAAATAAATGTGCAAT+TGG - chr4_2:54073727-54073746 None:intergenic 20.0%
!! ATATTTGTCATCAATAAAGA+TGG - chr4_2:54074030-54074049 None:intergenic 20.0%
!!! TTGACTTCTAAAAAGATATT+AGG - chr4_2:54074058-54074077 None:intergenic 20.0%
!!! GTATTAGTTTATATGTATAG+GGG + chr4_2:54074710-54074729 Msa0607280:three_prime_UTR 20.0%
!! TCCAATTAAGATAAGAAAAA+TGG + chr4_2:54074750-54074769 Msa0607280:three_prime_UTR 20.0%
!!! TCCATTTTTCTTATCTTAAT+TGG - chr4_2:54074754-54074773 None:intergenic 20.0%
!!! TTTAATGTTTTGGGTATGAA+CGG - chr4_2:54066762-54066781 None:intergenic 25.0%
!! AAAGGGAAATATCCAATTTT+TGG - chr4_2:54067485-54067504 None:intergenic 25.0%
! AAAAAAATTCAACTCAACTC+TGG + chr4_2:54067593-54067612 Msa0607280:intron 25.0%
!!! TATTTTTGACTTGACAGAAT+TGG - chr4_2:54067721-54067740 None:intergenic 25.0%
! ATAATCACCAAGGAAAAAAT+TGG + chr4_2:54067786-54067805 Msa0607280:intron 25.0%
! TAATCACCAAGGAAAAAATT+GGG + chr4_2:54067787-54067806 Msa0607280:intron 25.0%
! TGCCCTAGTTAAATTATAAT+TGG - chr4_2:54067909-54067928 None:intergenic 25.0%
!! ATAATTTAACTAGGGCATTA+TGG + chr4_2:54067912-54067931 Msa0607280:intron 25.0%
!! TAATTTAACTAGGGCATTAT+GGG + chr4_2:54067913-54067932 Msa0607280:intron 25.0%
!!! TTTTGAAGAGGAATCTATAT+AGG + chr4_2:54068045-54068064 Msa0607280:intron 25.0%
! AATACTCCTATATTAAAGGA+TGG - chr4_2:54068086-54068105 None:intergenic 25.0%
!!! GGAGTATTTTATCAAAATCA+TGG + chr4_2:54068098-54068117 Msa0607280:intron 25.0%
! ATGGATATTAAGATAAGATG+TGG + chr4_2:54068117-54068136 Msa0607280:intron 25.0%
!!! ACAGAGGAAGTATTAATAAA+GGG + chr4_2:54068519-54068538 Msa0607280:intron 25.0%
!! GTATTAATAAAGGGTATAGT+TGG + chr4_2:54068528-54068547 Msa0607280:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr4_2:54068775-54068794 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+CGG + chr4_2:54068810-54068829 Msa0607280:intron 25.0%
!!! AGTATTGATTTTTGTAGAGT+TGG + chr4_2:54068864-54068883 Msa0607280:intron 25.0%
!!! GTATTGATTTTTGTAGAGTT+GGG + chr4_2:54068865-54068884 Msa0607280:intron 25.0%
!!! TGATATTAAATTTTGGTGGT+TGG + chr4_2:54068988-54069007 Msa0607280:intron 25.0%
!! CTTTTCAAAATCCATAAGTT+AGG - chr4_2:54069050-54069069 None:intergenic 25.0%
!!! CTAACTTATGGATTTTGAAA+AGG + chr4_2:54069048-54069067 Msa0607280:intron 25.0%
! GATAAAAAGAACTCTTATGA+AGG - chr4_2:54069304-54069323 None:intergenic 25.0%
!! TTCTTTTTATCTCAATTCTC+AGG + chr4_2:54069313-54069332 Msa0607280:intron 25.0%
!!! ACTTGAGTCTTATTTTTATG+TGG + chr4_2:54069457-54069476 Msa0607280:intron 25.0%
!! TAACTTACAAACCGTATTTT+GGG - chr4_2:54069832-54069851 None:intergenic 25.0%
!! TTAACTTACAAACCGTATTT+TGG - chr4_2:54069833-54069852 None:intergenic 25.0%
! ATTTATGATACGTGATGATT+AGG - chr4_2:54070034-54070053 None:intergenic 25.0%
! TAATCATCACGTATCATAAA+TGG + chr4_2:54070033-54070052 Msa0607280:intron 25.0%
! ATTGTAATTTCATCTAACAC+TGG - chr4_2:54070091-54070110 None:intergenic 25.0%
!!! TAGTTGATACATAACTTTTC+AGG + chr4_2:54070203-54070222 Msa0607280:intron 25.0%
!!! AGTTGATACATAACTTTTCA+GGG + chr4_2:54070204-54070223 Msa0607280:intron 25.0%
! AAATGTCTAAATGTTGTTAC+AGG + chr4_2:54070234-54070253 Msa0607280:intron 25.0%
! TTAATTGATGTTGAAACTTC+AGG + chr4_2:54070401-54070420 Msa0607280:intron 25.0%
!!! TTATTTTGGTGAAGCTAAAA+TGG + chr4_2:54070854-54070873 Msa0607280:CDS 25.0%
!! TCGAGGTATAAATACATTTT+TGG + chr4_2:54070880-54070899 Msa0607280:intron 25.0%
! AATTCTAAACATATGCTTTG+AGG + chr4_2:54071302-54071321 Msa0607280:intron 25.0%
! ATTATATACTCATCCTACTT+AGG + chr4_2:54071338-54071357 Msa0607280:intron 25.0%
! ACAAAAAAATCCATGTCAAT+AGG - chr4_2:54071618-54071637 None:intergenic 25.0%
!! AATTTGGAACATCCTAATAA+GGG - chr4_2:54071654-54071673 None:intergenic 25.0%
! CAGTTGAATTATATGTAATG+AGG - chr4_2:54071821-54071840 None:intergenic 25.0%
! AAAGATTATCCTAAGGATTT+CGG - chr4_2:54071858-54071877 None:intergenic 25.0%
! GTTAATGATAAATGTACTAC+AGG + chr4_2:54071937-54071956 Msa0607280:intron 25.0%
! ATCATTGTATCTATATGTGT+TGG + chr4_2:54072091-54072110 Msa0607280:CDS 25.0%
!!! GGAACTATCTATTTTGATAT+TGG + chr4_2:54072112-54072131 Msa0607280:CDS 25.0%
!!! ATCTATTTTGATATTGGCTA+CGG + chr4_2:54072118-54072137 Msa0607280:CDS 25.0%
! TTTATGACTTTCATGTCAAT+TGG + chr4_2:54072190-54072209 Msa0607280:CDS 25.0%
!! GATAGTTTTCATCAATACTT+TGG + chr4_2:54072311-54072330 Msa0607280:intron 25.0%
! AATCTCACAAGTATTTATAC+TGG - chr4_2:54072394-54072413 None:intergenic 25.0%
! TAAATACTTGTGAGATTGTT+TGG + chr4_2:54072397-54072416 Msa0607280:intron 25.0%
! CTTATTTCCATAAAATCTCT+AGG + chr4_2:54072463-54072482 Msa0607280:intron 25.0%
! AAGAATTATACTAGTGCTTA+TGG - chr4_2:54072608-54072627 None:intergenic 25.0%
! TAAGCACTAGTATAATTCTT+TGG + chr4_2:54072608-54072627 Msa0607280:intron 25.0%
! TACAATCAAAGTTGAAATGA+AGG - chr4_2:54072743-54072762 None:intergenic 25.0%
! TGAATAAACACATATCTTAC+AGG - chr4_2:54072787-54072806 None:intergenic 25.0%
! ATCAACAAAAACATCATAAG+CGG - chr4_2:54072815-54072834 None:intergenic 25.0%
!! TTTGTTGATATATCTGAAAC+AGG + chr4_2:54072826-54072845 Msa0607280:intron 25.0%
! GAAAGAATGAATGGATATTA+TGG + chr4_2:54072860-54072879 Msa0607280:CDS 25.0%
!! TTTTTCACTGTTAACATCTA+TGG + chr4_2:54073007-54073026 Msa0607280:CDS 25.0%
! GGAATCATTGTAAGAAAAAA+TGG + chr4_2:54073112-54073131 Msa0607280:intron 25.0%
! ATATGAAAAATTAACGCATG+TGG - chr4_2:54073169-54073188 None:intergenic 25.0%
! CCAATTTCATATATCAGTTA+CGG + chr4_2:54073277-54073296 Msa0607280:CDS 25.0%
!!! GATTTTGACTAAACTGATTA+TGG + chr4_2:54073367-54073386 Msa0607280:intron 25.0%
! TCTGTTGAACAATAAATTTG+AGG + chr4_2:54073443-54073462 Msa0607280:intron 25.0%
!! TGATTTTACAGGTATAGAAT+TGG - chr4_2:54073555-54073574 None:intergenic 25.0%
!!! GGAAGAAAAATTGATTTTAC+AGG - chr4_2:54073566-54073585 None:intergenic 25.0%
!! AAACATACACTAATTGATTC+CGG + chr4_2:54073601-54073620 Msa0607280:intron 25.0%
! ATGTTTGTCATCAATAAAGA+TGG - chr4_2:54073888-54073907 None:intergenic 25.0%
!! CATATTAATTAGCATTGAGA+TGG - chr4_2:54074198-54074217 None:intergenic 25.0%
! ATTAATATGAATTTGGATGC+AGG + chr4_2:54074209-54074228 Msa0607280:intron 25.0%
! TTAATATGAATTTGGATGCA+GGG + chr4_2:54074210-54074229 Msa0607280:intron 25.0%
!! GCAGTAAGTTTTCTATATAA+TGG - chr4_2:54074441-54074460 None:intergenic 25.0%
! GTTATATAATTGAATTCTGC+TGG + chr4_2:54074626-54074645 Msa0607280:three_prime_UTR 25.0%
! ATGGGAGAGTTTAATGTTTT+GGG - chr4_2:54066771-54066790 None:intergenic 30.0%
TATGAAGAGAGAGAAAAGAT+GGG - chr4_2:54066789-54066808 None:intergenic 30.0%
TTATGAAGAGAGAGAAAAGA+TGG - chr4_2:54066790-54066809 None:intergenic 30.0%
TTCCATGTAACTGTTTGATT+AGG + chr4_2:54066813-54066832 Msa0607280:five_prime_UTR 30.0%
TACCTAATCAAACAGTTACA+TGG - chr4_2:54066818-54066837 None:intergenic 30.0%
TTGATTAGGTACAGCATTAA+TGG + chr4_2:54066827-54066846 Msa0607280:five_prime_UTR 30.0%
TTCAAATCCACATAACAACA+TGG + chr4_2:54066960-54066979 Msa0607280:exon 30.0%
! AGAGTTATGTTGCCAAATTT+TGG + chr4_2:54067093-54067112 Msa0607280:CDS 30.0%
! GAGTTATGTTGCCAAATTTT+GGG + chr4_2:54067094-54067113 Msa0607280:CDS 30.0%
CCTTGAATTTACTCATGTTT+GGG - chr4_2:54067330-54067349 None:intergenic 30.0%
ACCTTGAATTTACTCATGTT+TGG - chr4_2:54067331-54067350 None:intergenic 30.0%
GTACTTCTAAATAATCACCA+AGG + chr4_2:54067776-54067795 Msa0607280:intron 30.0%
AATCACCAAGGAAAAAATTG+GGG + chr4_2:54067788-54067807 Msa0607280:intron 30.0%
!!! AAAAACCCCAATTTTTTCCT+TGG - chr4_2:54067796-54067815 None:intergenic 30.0%
CATTATTTGTAGCTGTATAG+TGG - chr4_2:54067869-54067888 None:intergenic 30.0%
TACAGCTACAAATAATGAAG+TGG + chr4_2:54067872-54067891 Msa0607280:intron 30.0%
AAAACGTCATATAATTTGGG+CGG - chr4_2:54068256-54068275 None:intergenic 30.0%
CCCAAAACGTCATATAATTT+GGG - chr4_2:54068259-54068278 None:intergenic 30.0%
! CCCAAATTATATGACGTTTT+GGG + chr4_2:54068256-54068275 Msa0607280:intron 30.0%
ACCCAAAACGTCATATAATT+TGG - chr4_2:54068260-54068279 None:intergenic 30.0%
! TCAAATTATAAGTCGCTTTG+AGG - chr4_2:54068497-54068516 None:intergenic 30.0%
TCAAAGCGACTTATAATTTG+AGG + chr4_2:54068496-54068515 Msa0607280:intron 30.0%
!! GACAGAGGAAGTATTAATAA+AGG + chr4_2:54068518-54068537 Msa0607280:intron 30.0%
CATGGCAAAGATATAAGATA+AGG - chr4_2:54068732-54068751 None:intergenic 30.0%
TATATTGTAGCATCTTAGCA+TGG - chr4_2:54068750-54068769 None:intergenic 30.0%
!! TTATGGATTTTGAAAAGGGT+AGG + chr4_2:54069053-54069072 Msa0607280:intron 30.0%
!!! TTGTAATGATTTTTTGGCGT+CGG + chr4_2:54069580-54069599 Msa0607280:intron 30.0%
TTATCAACTTACGGTGAAAA+GGG - chr4_2:54069879-54069898 None:intergenic 30.0%
ATTATCAACTTACGGTGAAA+AGG - chr4_2:54069880-54069899 None:intergenic 30.0%
AAATGAGAAGACAAAAACCA+TGG - chr4_2:54069983-54070002 None:intergenic 30.0%
TTCTCATTTGCACTAGTAAT+GGG + chr4_2:54069994-54070013 Msa0607280:intron 30.0%
ATCAACTAGCAAATTGCATA+TGG - chr4_2:54070191-54070210 None:intergenic 30.0%
! ACAAACTCTTTCTTTTGTTG+AGG + chr4_2:54070351-54070370 Msa0607280:intron 30.0%
TGATGCAACAATCATTGAAA+TGG + chr4_2:54070542-54070561 Msa0607280:CDS 30.0%
GATGCAACAATCATTGAAAT+GGG + chr4_2:54070543-54070562 Msa0607280:CDS 30.0%
TTGATATGTTTCAGATACTC+AGG - chr4_2:54071029-54071048 None:intergenic 30.0%
ATTCATACAATATTGACACG+TGG + chr4_2:54071057-54071076 Msa0607280:intron 30.0%
GAAAACAACTTACGACAAAA+AGG - chr4_2:54071512-54071531 None:intergenic 30.0%
CTGAAATTGTTGAACAAATG+AGG - chr4_2:54071553-54071572 None:intergenic 30.0%
TCAGAAACAACTTATACCTT+AGG + chr4_2:54071569-54071588 Msa0607280:intron 30.0%
! ATTTGGAACATCCTAATAAG+GGG - chr4_2:54071653-54071672 None:intergenic 30.0%
! GAATTTGGAACATCCTAATA+AGG - chr4_2:54071655-54071674 None:intergenic 30.0%
GACAGAAAAAGATTATCCTA+AGG - chr4_2:54071865-54071884 None:intergenic 30.0%
ATGATAAATGTACTACAGGA+AGG + chr4_2:54071941-54071960 Msa0607280:intron 30.0%
TGATAAATGTACTACAGGAA+GGG + chr4_2:54071942-54071961 Msa0607280:intron 30.0%
! ATCAATACTTTGGAAGTGTA+TGG + chr4_2:54072321-54072340 Msa0607280:intron 30.0%
! ACGATATCCTAGAGATTTTA+TGG - chr4_2:54072473-54072492 None:intergenic 30.0%
!! AAAATCTCTAGGATATCGTA+TGG + chr4_2:54072474-54072493 Msa0607280:intron 30.0%
ACAGGAACTTATGTATAAGT+TGG - chr4_2:54072769-54072788 None:intergenic 30.0%
TTGCACAATCACATATAACA+TGG + chr4_2:54072952-54072971 Msa0607280:CDS 30.0%
CATATAACATGGTGAAATTC+AGG + chr4_2:54072963-54072982 Msa0607280:CDS 30.0%
! ACTTGTTCCAAATTTTCTCA+TGG + chr4_2:54073072-54073091 Msa0607280:CDS 30.0%
! CTTGTTCCAAATTTTCTCAT+GGG + chr4_2:54073073-54073092 Msa0607280:CDS 30.0%
ATGATTCCCATGAGAAAATT+TGG - chr4_2:54073082-54073101 None:intergenic 30.0%
! TATATTGTTGTTGTTCATGC+AGG + chr4_2:54073186-54073205 Msa0607280:intron 30.0%
! ATATTGTTGTTGTTCATGCA+GGG + chr4_2:54073187-54073206 Msa0607280:intron 30.0%
CCGTAACTGATATATGAAAT+TGG - chr4_2:54073280-54073299 None:intergenic 30.0%
!! AGAATTGGTATTGACATGTT+TGG - chr4_2:54073540-54073559 None:intergenic 30.0%
!! TGTTACTTTAGTCTCAAGTA+TGG - chr4_2:54073683-54073702 None:intergenic 30.0%
GCTCTATATGTATAATAGCA+CGG + chr4_2:54073805-54073824 Msa0607280:intron 30.0%
TCAATAAAGATGGAAGTGAT+TGG - chr4_2:54073878-54073897 None:intergenic 30.0%
TATGTGATAACACACATGTT+AGG + chr4_2:54074306-54074325 Msa0607280:CDS 30.0%
ATGTGATAACACACATGTTA+GGG + chr4_2:54074307-54074326 Msa0607280:CDS 30.0%
ATATCCTGTAACATAAGAGA+AGG - chr4_2:54074380-54074399 None:intergenic 30.0%
TTGAGAAGATAGTGAATGAA+GGG - chr4_2:54074544-54074563 None:intergenic 30.0%
!!! TTTTTTGTGGTTGTTCTTCT+AGG - chr4_2:54074592-54074611 None:intergenic 30.0%
! GATGGGAGAGTTTAATGTTT+TGG - chr4_2:54066772-54066791 None:intergenic 35.0%
TCAATCTCCATGTTGTTATG+TGG - chr4_2:54066970-54066989 None:intergenic 35.0%
! GCATATTGTGGTCTTAATAG+AGG + chr4_2:54067045-54067064 Msa0607280:CDS 35.0%
!! ATGTTGCCAAATTTTGGGAA+AGG + chr4_2:54067099-54067118 Msa0607280:CDS 35.0%
! CCATTAAGCAACCTTTTAGT+TGG - chr4_2:54067126-54067145 None:intergenic 35.0%
CCAACTAAAAGGTTGCTTAA+TGG + chr4_2:54067123-54067142 Msa0607280:CDS 35.0%
!! AGGTTGCTTAATGGACTAAA+TGG + chr4_2:54067132-54067151 Msa0607280:CDS 35.0%
ATAATAGCCATGATTCTACC+AGG - chr4_2:54067168-54067187 None:intergenic 35.0%
TGGTAGAATCATGGCTATTA+TGG + chr4_2:54067167-54067186 Msa0607280:CDS 35.0%
GGTAGAATCATGGCTATTAT+GGG + chr4_2:54067168-54067187 Msa0607280:CDS 35.0%
CCCAAACATGAGTAAATTCA+AGG + chr4_2:54067327-54067346 Msa0607280:intron 35.0%
! AGTTTGATAGTTTCTCGCTA+AGG + chr4_2:54067410-54067429 Msa0607280:intron 35.0%
AGACCAAGCCATTAAAACAA+GGG - chr4_2:54067636-54067655 None:intergenic 35.0%
! TTTGTAGCTGTATAGTGGAA+AGG - chr4_2:54067864-54067883 None:intergenic 35.0%
CTCATATTAGAGAACACGAA+AGG + chr4_2:54067988-54068007 Msa0607280:intron 35.0%
!!! AGGGACATGTTTTTTTGAAG+AGG + chr4_2:54068033-54068052 Msa0607280:intron 35.0%
TATATTAAAGGATGGAGGGA+GGG - chr4_2:54068078-54068097 None:intergenic 35.0%
CTCCTATATTAAAGGATGGA+GGG - chr4_2:54068082-54068101 None:intergenic 35.0%
ACTCCTATATTAAAGGATGG+AGG - chr4_2:54068083-54068102 None:intergenic 35.0%
! GCCCAAATTATATGACGTTT+TGG + chr4_2:54068255-54068274 Msa0607280:intron 35.0%
GACTTATAATTTGAGGACAG+AGG + chr4_2:54068503-54068522 Msa0607280:intron 35.0%
AGGGAGTAATAAGGAATAGA+GGG + chr4_2:54068833-54068852 Msa0607280:intron 35.0%
CAAGCACATAACCTAACTTA+TGG + chr4_2:54069036-54069055 Msa0607280:intron 35.0%
TTCAATGAGCATGTGAATCT+AGG + chr4_2:54069076-54069095 Msa0607280:intron 35.0%
TAGTCATGTTGCCCAAAATA+CGG + chr4_2:54069818-54069837 Msa0607280:intron 35.0%
!! TAGGGCATTAAAGTGTGTTT+TGG - chr4_2:54069944-54069963 None:intergenic 35.0%
AAACACACTTTAATGCCCTA+TGG + chr4_2:54069944-54069963 Msa0607280:intron 35.0%
CTTCTCATTTGCACTAGTAA+TGG + chr4_2:54069993-54070012 Msa0607280:intron 35.0%
TACGTGATGATTAGGTGAAA+AGG - chr4_2:54070026-54070045 None:intergenic 35.0%
AGGTAGACTTGCAAAAAATG+TGG + chr4_2:54070254-54070273 Msa0607280:intron 35.0%
! GCAAAAAATGTGGTAATGAC+AGG + chr4_2:54070264-54070283 Msa0607280:CDS 35.0%
ACAGGAAATGTTCTTCTCAA+TGG + chr4_2:54070282-54070301 Msa0607280:CDS 35.0%
CAGGAAATGTTCTTCTCAAT+GGG + chr4_2:54070283-54070302 Msa0607280:CDS 35.0%
AATGGGAAGAAAAAAACTCC+AGG + chr4_2:54070300-54070319 Msa0607280:CDS 35.0%
AAGAAAAAAACTCCAGGCTA+TGG + chr4_2:54070306-54070325 Msa0607280:CDS 35.0%
TCTTCTTTGGACATTGTTGA+TGG - chr4_2:54070507-54070526 None:intergenic 35.0%
ATGTCCAAAGAAGAAATCAG+CGG + chr4_2:54070513-54070532 Msa0607280:CDS 35.0%
CAGATAGGTTAATAGGTAAC+TGG + chr4_2:54070580-54070599 Msa0607280:CDS 35.0%
! AGTGGCGAAACTGTTTATTT+TGG + chr4_2:54070840-54070859 Msa0607280:CDS 35.0%
AAGTCCTTCTCAAAATGTGA+GGG - chr4_2:54070964-54070983 None:intergenic 35.0%
! GATTTCTTTTACGTGGACAA+GGG - chr4_2:54071186-54071205 None:intergenic 35.0%
! TCAGAAGGATTTCTTTTACG+TGG - chr4_2:54071193-54071212 None:intergenic 35.0%
CATCTTAGGAAATGATCAGA+AGG - chr4_2:54071208-54071227 None:intergenic 35.0%
AGTCAGAATTGATGCATCTT+AGG - chr4_2:54071222-54071241 None:intergenic 35.0%
TTCTGACTTTGACGTTGTAA+CGG + chr4_2:54071234-54071253 Msa0607280:CDS 35.0%
TCTTGCAAAAGATCCTAAGT+AGG - chr4_2:54071354-54071373 None:intergenic 35.0%
TCAATATCGTGTAAGACCTA+AGG - chr4_2:54071588-54071607 None:intergenic 35.0%
TGAACAAACACCTATTGACA+TGG + chr4_2:54071605-54071624 Msa0607280:intron 35.0%
!!! TCACTTTTTTCCCCCTTATT+AGG + chr4_2:54071639-54071658 Msa0607280:intron 35.0%
! TTTGGAACATCCTAATAAGG+GGG - chr4_2:54071652-54071671 None:intergenic 35.0%
ATGAAAGGATCTGCTGAATT+TGG - chr4_2:54071670-54071689 None:intergenic 35.0%
AGCAGATCCTTTCATGAATT+TGG + chr4_2:54071675-54071694 Msa0607280:CDS 35.0%
! TTTTCTGTCAGTATAGTAGC+CGG + chr4_2:54071876-54071895 Msa0607280:intron 35.0%
AATATTATGAAGGACCGACA+AGG - chr4_2:54071911-54071930 None:intergenic 35.0%
CTTGAAACTGAGATAAACCT+TGG + chr4_2:54071965-54071984 Msa0607280:CDS 35.0%
ATGACTTTCATGTCAATTGG+AGG + chr4_2:54072193-54072212 Msa0607280:CDS 35.0%
TATACTAGTGCTTATGGCAT+CGG - chr4_2:54072602-54072621 None:intergenic 35.0%
TTTCTCATGGGAATCATTAC+AGG + chr4_2:54073085-54073104 Msa0607280:CDS 35.0%
ATATATCAGTTACGGTGCAT+GGG + chr4_2:54073285-54073304 Msa0607280:CDS 35.0%
! TGTATGTTTAGTTCGACTCT+TGG - chr4_2:54073590-54073609 None:intergenic 35.0%
CCTAACAAATTCAGTTCTTC+CGG - chr4_2:54073623-54073642 None:intergenic 35.0%
!! CAAGTATGGACTTGTTACTA+GGG - chr4_2:54073669-54073688 None:intergenic 35.0%
!! TCAAGTATGGACTTGTTACT+AGG - chr4_2:54073670-54073689 None:intergenic 35.0%
TATGTTCCTAGAAGTCGATT+TGG + chr4_2:54073918-54073937 Msa0607280:intron 35.0%
! AAATCTCCAAATCGACTTCT+AGG - chr4_2:54073927-54073946 None:intergenic 35.0%
!! TCATACAAGAATGACTTGCT+TGG + chr4_2:54074234-54074253 Msa0607280:CDS 35.0%
! CATATTCTCCTGTCAGTTTT+GGG - chr4_2:54074290-54074309 None:intergenic 35.0%
! ACATATTCTCCTGTCAGTTT+TGG - chr4_2:54074291-54074310 None:intergenic 35.0%
TTGAATTAAGCCATTCCAAG+TGG + chr4_2:54074331-54074350 Msa0607280:CDS 35.0%
!! CTTTGTTGTTCTCAAGTTCA+AGG + chr4_2:54074404-54074423 Msa0607280:CDS 35.0%
! AAGCTGTTGTATGGTTCTTT+TGG - chr4_2:54074463-54074482 None:intergenic 35.0%
! TCTTTTCTCAAGCTGTTGTA+TGG - chr4_2:54074472-54074491 None:intergenic 35.0%
TTGAGAAAAGACCTTCTTTC+AGG + chr4_2:54074481-54074500 Msa0607280:CDS 35.0%
TGAGAAGATAGTGAATGAAG+GGG - chr4_2:54074543-54074562 None:intergenic 35.0%
CTTGAGAAGATAGTGAATGA+AGG - chr4_2:54074545-54074564 None:intergenic 35.0%
TCATTCACTATCTTCTCAAG+AGG + chr4_2:54074545-54074564 Msa0607280:CDS 35.0%
CATTCACTATCTTCTCAAGA+GGG + chr4_2:54074546-54074565 Msa0607280:CDS 35.0%
AAATGGAACATTTGTGTCCT+TGG + chr4_2:54074767-54074786 Msa0607280:three_prime_UTR 35.0%
CAACAACAAAGGATGCAACA+TGG + chr4_2:54067005-54067024 Msa0607280:CDS 40.0%
! AGTGATGAGGAAGCATATTG+TGG + chr4_2:54067033-54067052 Msa0607280:CDS 40.0%
ATAGAGGAAGCTTCTTAGCA+TGG + chr4_2:54067061-54067080 Msa0607280:CDS 40.0%
TAGAGGAAGCTTCTTAGCAT+GGG + chr4_2:54067062-54067081 Msa0607280:CDS 40.0%
GTTGGTCCTTTCCCAAAATT+TGG - chr4_2:54067108-54067127 None:intergenic 40.0%
TTGGGAAAGGACCAACTAAA+AGG + chr4_2:54067112-54067131 Msa0607280:CDS 40.0%
TGCAAGTGTATCAAGCAAAG+TGG - chr4_2:54067214-54067233 None:intergenic 40.0%
ACTTTGCTTGATACACTTGC+AGG + chr4_2:54067213-54067232 Msa0607280:CDS 40.0%
! TTGATAGTTTCTCGCTAAGG+TGG + chr4_2:54067413-54067432 Msa0607280:intron 40.0%
! TCCCTTTTGAGCTTTCTTTC+TGG + chr4_2:54067498-54067517 Msa0607280:intron 40.0%
CCCAGAAAGAAAGCTCAAAA+GGG - chr4_2:54067502-54067521 None:intergenic 40.0%
! CCCTTTTGAGCTTTCTTTCT+GGG + chr4_2:54067499-54067518 Msa0607280:intron 40.0%
TCCCAGAAAGAAAGCTCAAA+AGG - chr4_2:54067503-54067522 None:intergenic 40.0%
CAGACCAAGCCATTAAAACA+AGG - chr4_2:54067637-54067656 None:intergenic 40.0%
!!! TGTTTTAATGGCTTGGTCTG+TGG + chr4_2:54067637-54067656 Msa0607280:intron 40.0%
!! TTGACAGAATTGGTTCTGGA+TGG - chr4_2:54067711-54067730 None:intergenic 40.0%
! TGACTTGACAGAATTGGTTC+TGG - chr4_2:54067715-54067734 None:intergenic 40.0%
! GTATAGTGGAAAGGTCACTA+AGG - chr4_2:54067855-54067874 None:intergenic 40.0%
CTATATTAAAGGATGGAGGG+AGG - chr4_2:54068079-54068098 None:intergenic 40.0%
CTCCCTCCATCCTTTAATAT+AGG + chr4_2:54068077-54068096 Msa0607280:intron 40.0%
GGGAAATACACATCTTAGCA+TGG - chr4_2:54068705-54068724 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr4_2:54068813-54068832 Msa0607280:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr4_2:54068814-54068833 Msa0607280:intron 40.0%
CTATTCCTTATTACTCCCTC+CGG - chr4_2:54068832-54068851 None:intergenic 40.0%
GAGGGAGTAATAAGGAATAG+AGG + chr4_2:54068832-54068851 Msa0607280:intron 40.0%
GGGAGTAATAAGGAATAGAG+GGG + chr4_2:54068834-54068853 Msa0607280:intron 40.0%
TGTAGAGTTGGGTAACAAAG+TGG + chr4_2:54068876-54068895 Msa0607280:intron 40.0%
AATGGCAGCTGTCAAAGATT+TGG - chr4_2:54068936-54068955 None:intergenic 40.0%
AACTTACGGTGAAAAGGGAA+GGG - chr4_2:54069874-54069893 None:intergenic 40.0%
CTTACAACAAAACCATAGCC+TGG - chr4_2:54070321-54070340 None:intergenic 40.0%
! ACGCAAGAAGATGTGTTGTT+AGG + chr4_2:54070432-54070451 Msa0607280:CDS 40.0%
!! TAAGCCGCTGATTTCTTCTT+TGG - chr4_2:54070520-54070539 None:intergenic 40.0%
TTAACCTATCTGCACAGTCA+TGG - chr4_2:54070572-54070591 None:intergenic 40.0%
GACTGTGCAGATAGGTTAAT+AGG + chr4_2:54070573-54070592 Msa0607280:CDS 40.0%
ATAGGTAACTGGCATTTGAG+AGG + chr4_2:54070591-54070610 Msa0607280:CDS 40.0%
! TGGCATTTGAGAGGTATAAG+TGG + chr4_2:54070600-54070619 Msa0607280:CDS 40.0%
! CATTTGAGAGGTATAAGTGG+TGG + chr4_2:54070603-54070622 Msa0607280:CDS 40.0%
TTGCACTTGAGATTCTCACA+AGG + chr4_2:54070646-54070665 Msa0607280:CDS 40.0%
CTTAGAAATTGTGCTCGTGA+TGG + chr4_2:54070741-54070760 Msa0607280:CDS 40.0%
! GATCTTTTCTTGCTCTCTAG+TGG + chr4_2:54070822-54070841 Msa0607280:CDS 40.0%
TGAAGCTAAAATGGCAATCG+AGG + chr4_2:54070863-54070882 Msa0607280:CDS 40.0%
!! GATACCCTCACATTTTGAGA+AGG + chr4_2:54070957-54070976 Msa0607280:intron 40.0%
CAAGTCCTTCTCAAAATGTG+AGG - chr4_2:54070965-54070984 None:intergenic 40.0%
! GGATTTCTTTTACGTGGACA+AGG - chr4_2:54071187-54071206 None:intergenic 40.0%
GCTGTAGCCAAATTCATGAA+AGG - chr4_2:54071685-54071704 None:intergenic 40.0%
TTATCCTAAGGATTTCGGCT+TGG - chr4_2:54071853-54071872 None:intergenic 40.0%
AGCAACTCAAAACACTGACA+AGG + chr4_2:54072008-54072027 Msa0607280:CDS 40.0%
GTGAACATGTGTAGAGATGT+TGG + chr4_2:54072040-54072059 Msa0607280:CDS 40.0%
! GTAGAGATGTTGGTTACTAC+TGG + chr4_2:54072050-54072069 Msa0607280:CDS 40.0%
TCCTGATATAAATGCACCAC+AGG - chr4_2:54072170-54072189 None:intergenic 40.0%
! AGAACTTGTTTGAGTCTCTC+TGG + chr4_2:54072345-54072364 Msa0607280:intron 40.0%
! CTTATGGCATCGGATTTGTT+CGG - chr4_2:54072592-54072611 None:intergenic 40.0%
TCTTTCATCATTCCCGTTCT+TGG + chr4_2:54072910-54072929 Msa0607280:CDS 40.0%
AGAGCAATAGCAACCAAGAA+CGG - chr4_2:54072926-54072945 None:intergenic 40.0%
AACGCATAGTGAATGAATCC+TGG - chr4_2:54072989-54073008 None:intergenic 40.0%
AGTGATTGAGAGTCTCATGA+TGG + chr4_2:54073039-54073058 Msa0607280:CDS 40.0%
TGATGACCTCTGGATTCTTT+AGG + chr4_2:54073218-54073237 Msa0607280:CDS 40.0%
TAGCAACCTAAAGAATCCAG+AGG - chr4_2:54073227-54073246 None:intergenic 40.0%
CTGATCTTCCAAAACCTGTT+TGG + chr4_2:54073248-54073267 Msa0607280:CDS 40.0%
CATATATCAGTTACGGTGCA+TGG + chr4_2:54073284-54073303 Msa0607280:CDS 40.0%
TTCTCGTTGATACCAAGTGT+CGG + chr4_2:54073320-54073339 Msa0607280:intron 40.0%
! ATGTTTAGTTCGACTCTTGG+AGG - chr4_2:54073587-54073606 None:intergenic 40.0%
! CCGGAAGAACTGAATTTGTT+AGG + chr4_2:54073620-54073639 Msa0607280:intron 40.0%
!! TGACACATAAGCACTGATGT+TGG - chr4_2:54074153-54074172 None:intergenic 40.0%
ATTGAGATGGACACTAACAC+CGG - chr4_2:54074185-54074204 None:intergenic 40.0%
AATTAAGCCATTCCAAGTGG+TGG + chr4_2:54074334-54074353 Msa0607280:CDS 40.0%
ATTAAGCCATTCCAAGTGGT+GGG + chr4_2:54074335-54074354 Msa0607280:CDS 40.0%
TCCTCCTTCTCTTATGTTAC+AGG + chr4_2:54074373-54074392 Msa0607280:CDS 40.0%
TCCTGTAACATAAGAGAAGG+AGG - chr4_2:54074377-54074396 None:intergenic 40.0%
! GATGGCATTTTCCTGAAAGA+AGG - chr4_2:54074495-54074514 None:intergenic 40.0%
!! CATCAGGTTAGAGCTTTGTT+TGG + chr4_2:54074867-54074886 Msa0607280:three_prime_UTR 40.0%
ATGGAGATTGAAGCAGCAAG+TGG + chr4_2:54066979-54066998 Msa0607280:CDS 45.0%
GCAAGTGGTAGCAACAACAA+AGG + chr4_2:54066994-54067013 Msa0607280:CDS 45.0%
!! CTAAATGGTTTTGCTGAGCC+TGG + chr4_2:54067147-54067166 Msa0607280:CDS 45.0%
ATGGCTATTATGGGTCCTTC+TGG + chr4_2:54067177-54067196 Msa0607280:CDS 45.0%
ACTCTGGTGACACTAACCTA+AGG + chr4_2:54067609-54067628 Msa0607280:intron 45.0%
CTCTGGTGACACTAACCTAA+GGG + chr4_2:54067610-54067629 Msa0607280:intron 45.0%
CCATTAAAACAAGGGCCCTT+AGG - chr4_2:54067628-54067647 None:intergenic 45.0%
!!! CCTAAGGGCCCTTGTTTTAA+TGG + chr4_2:54067625-54067644 Msa0607280:intron 45.0%
!! TTTAATGGCTTGGTCTGTGG+TGG + chr4_2:54067640-54067659 Msa0607280:intron 45.0%
!! TTAATGGCTTGGTCTGTGGT+GGG + chr4_2:54067641-54067660 Msa0607280:intron 45.0%
! ATAAGGAATAGAGGGGTGCA+TGG + chr4_2:54068841-54068860 Msa0607280:intron 45.0%
AGAGTTGGGTAACAAAGTGG+CGG + chr4_2:54068879-54068898 Msa0607280:intron 45.0%
GGTGGTTGGAATTGTGAGAT+TGG + chr4_2:54069002-54069021 Msa0607280:intron 45.0%
TAATCCAGAGTTTGACAGCG+AGG - chr4_2:54069509-54069528 None:intergenic 45.0%
GGAAGGGAACACACAATTCA+TGG - chr4_2:54069858-54069877 None:intergenic 45.0%
CAACTTACGGTGAAAAGGGA+AGG - chr4_2:54069875-54069894 None:intergenic 45.0%
TTGAGATTCTCACAAGGCCT+CGG + chr4_2:54070652-54070671 Msa0607280:CDS 45.0%
TCATCAAGGAACAGTAACCG+AGG - chr4_2:54070672-54070691 None:intergenic 45.0%
TTCCTTGATGAACCGACTAG+TGG + chr4_2:54070681-54070700 Msa0607280:CDS 45.0%
! AACCACTAGTCGGTTCATCA+AGG - chr4_2:54070686-54070705 None:intergenic 45.0%
TGATGAACCGACTAGTGGTT+TGG + chr4_2:54070686-54070705 Msa0607280:CDS 45.0%
! GAAATTGTGCTCGTGATGGA+AGG + chr4_2:54070745-54070764 Msa0607280:CDS 45.0%
AGTGCAAAGACTTCACTGCT+AGG - chr4_2:54070795-54070814 None:intergenic 45.0%
!!! GTGCAGTTTTTTGCTGAAGC+CGG + chr4_2:54071157-54071176 Msa0607280:intron 45.0%
TTTACGTGGACAAGGGAAAC+CGG - chr4_2:54071179-54071198 None:intergenic 45.0%
GTTGTAACGGCTACACTGAA+GGG + chr4_2:54071247-54071266 Msa0607280:CDS 45.0%
CTACACTGAAGGGATCTCAA+AGG + chr4_2:54071257-54071276 Msa0607280:CDS 45.0%
TATGCCAAGCCGAAATCCTT+AGG + chr4_2:54071846-54071865 Msa0607280:intron 45.0%
! ATGTTGGTTACTACTGGCTG+AGG + chr4_2:54072056-54072075 Msa0607280:CDS 45.0%
GCCTGTGGTGCATTTATATC+AGG + chr4_2:54072166-54072185 Msa0607280:CDS 45.0%
GAGCAATAGCAACCAAGAAC+GGG - chr4_2:54072925-54072944 None:intergenic 45.0%
AACATGGTGAAATTCAGGCC+AGG + chr4_2:54072968-54072987 Msa0607280:CDS 45.0%
ATGGGAATCATTACAGGAGC+TGG + chr4_2:54073091-54073110 Msa0607280:CDS 45.0%
ACGCATGTGGATCATGTAGT+TGG - chr4_2:54073156-54073175 None:intergenic 45.0%
! GGAATCATGATGATGACCTC+TGG + chr4_2:54073208-54073227 Msa0607280:CDS 45.0%
GAAATTGGATAGCGCCAAAC+AGG - chr4_2:54073265-54073284 None:intergenic 45.0%
!! GTTGATACCAAGTGTCGGTT+TGG + chr4_2:54073325-54073344 Msa0607280:intron 45.0%
CACAAAACCAAACCGACACT+TGG - chr4_2:54073335-54073354 None:intergenic 45.0%
!!! CAAGTGTCGGTTTGGTTTTG+TGG + chr4_2:54073333-54073352 Msa0607280:intron 45.0%
TTATGTGTCAGTGTCGTGTC+CGG + chr4_2:54074163-54074182 Msa0607280:intron 45.0%
!!! CTGTCAGTTTTGGGTTACCT+GGG - chr4_2:54074281-54074300 None:intergenic 45.0%
TGCCATCTGTTACTACTTCC+AGG + chr4_2:54074508-54074527 Msa0607280:CDS 45.0%
CTCCTGGAAGTAGTAACAGA+TGG - chr4_2:54074513-54074532 None:intergenic 45.0%
CATCTGTTACTACTTCCAGG+AGG + chr4_2:54074511-54074530 Msa0607280:CDS 45.0%
TTGTTCTTCTAGGTGTGGAG+TGG - chr4_2:54074582-54074601 None:intergenic 45.0%
TGTGGTTGTTCTTCTAGGTG+TGG - chr4_2:54074587-54074606 None:intergenic 45.0%
AACCTGATGCTGATAAGGCT+AGG - chr4_2:54074856-54074875 None:intergenic 45.0%
GCTCTAACCTGATGCTGATA+AGG - chr4_2:54074861-54074880 None:intergenic 45.0%
CAACATGGACGAGAGTGATG+AGG + chr4_2:54067020-54067039 Msa0607280:CDS 50.0%
TGCTGAGCCTGGTAGAATCA+TGG + chr4_2:54067158-54067177 Msa0607280:CDS 50.0%
!! ATTATGGGTCCTTCTGGCTC+TGG + chr4_2:54067183-54067202 Msa0607280:CDS 50.0%
! GTGGATTTTCCAGAGCCAGA+AGG - chr4_2:54067195-54067214 None:intergenic 50.0%
!!! GGGCCCTTGTTTTAATGGCT+TGG + chr4_2:54067630-54067649 Msa0607280:intron 50.0%
!! TAATGGCTTGGTCTGTGGTG+GGG + chr4_2:54067642-54067661 Msa0607280:intron 50.0%
AGTGACCGGAGGGAGTAATA+AGG + chr4_2:54068824-54068843 Msa0607280:intron 50.0%
CTTACCTCGCTGTCAAACTC+TGG + chr4_2:54069502-54069521 Msa0607280:intron 50.0%
AAAAACCATGGTCCCCAGCA+CGG - chr4_2:54069971-54069990 None:intergenic 50.0%
GTCTCCATGACTGTGCAGAT+AGG + chr4_2:54070565-54070584 Msa0607280:CDS 50.0%
! GAGGTATAAGTGGTGGCGAA+AGG + chr4_2:54070610-54070629 Msa0607280:CDS 50.0%
GCACTGTCCAAACCACTAGT+CGG - chr4_2:54070696-54070715 None:intergenic 50.0%
CGTTGTAACGGCTACACTGA+AGG + chr4_2:54071246-54071265 Msa0607280:CDS 50.0%
ATGAAGGACCGACAAGGACA+CGG - chr4_2:54071905-54071924 None:intergenic 50.0%
ACCTTGGAAGCCAAGCTAGT+TGG + chr4_2:54071981-54072000 Msa0607280:CDS 50.0%
! ACCAACTAGCTTGGCTTCCA+AGG - chr4_2:54071985-54072004 None:intergenic 50.0%
TTGGAAGCCAAGCTAGTTGG+TGG + chr4_2:54071984-54072003 Msa0607280:CDS 50.0%
GTTGCTTCCACCAACTAGCT+TGG - chr4_2:54071994-54072013 None:intergenic 50.0%
CTACGGCTACACTTCCATCT+TGG + chr4_2:54072135-54072154 Msa0607280:CDS 50.0%
! TACACTTCCATCTTGGCTCG+TGG + chr4_2:54072142-54072161 Msa0607280:CDS 50.0%
! GGATAGCGCCAAACAGGTTT+TGG - chr4_2:54073259-54073278 None:intergenic 50.0%
GAGTTTGATCCACTACTCCC+AGG + chr4_2:54074261-54074280 Msa0607280:CDS 50.0%
! TTTGGGTTACCTGGGAGTAG+TGG - chr4_2:54074273-54074292 None:intergenic 50.0%
!!! CCTGTCAGTTTTGGGTTACC+TGG - chr4_2:54074282-54074301 None:intergenic 50.0%
CCAGGTAACCCAAAACTGAC+AGG + chr4_2:54074279-54074298 Msa0607280:CDS 50.0%
!! GTCCTAGCCTTATCAGCATC+AGG + chr4_2:54074851-54074870 Msa0607280:three_prime_UTR 50.0%
AAAACCATGGTCCCCAGCAC+GGG - chr4_2:54069970-54069989 None:intergenic 55.0%
TTACGGTGCATGGGCGATAC+AGG + chr4_2:54073294-54073313 Msa0607280:CDS 55.0%
CCAAGTCCCACCACTTGGAA+TGG - chr4_2:54074344-54074363 None:intergenic 55.0%
! CCATTCCAAGTGGTGGGACT+TGG + chr4_2:54074341-54074360 Msa0607280:CDS 55.0%
!! ATGAAGGGGTTGATGCCTCC+TGG - chr4_2:54074529-54074548 None:intergenic 55.0%
TAATGCCCTATGGCCCGTGC+TGG + chr4_2:54069954-54069973 Msa0607280:intron 60.0%
AATGCCCTATGGCCCGTGCT+GGG + chr4_2:54069955-54069974 Msa0607280:intron 60.0%
ACCGACAAGGACACGGACAC+CGG - chr4_2:54071898-54071917 None:intergenic 60.0%
ACAGGCACCACGAGCCAAGA+TGG - chr4_2:54072152-54072171 None:intergenic 60.0%
! ATCTTGGCTCGTGGTGCCTG+TGG + chr4_2:54072151-54072170 Msa0607280:CDS 60.0%
TGCTGCCAAGTCCCACCACT+TGG - chr4_2:54074349-54074368 None:intergenic 60.0%
ATGCCCTATGGCCCGTGCTG+GGG + chr4_2:54069956-54069975 Msa0607280:intron 65.0%
GCCGGTGTCCGTGTCCTTGT+CGG + chr4_2:54071894-54071913 Msa0607280:intron 65.0%
GGTCCCCAGCACGGGCCATA+GGG - chr4_2:54069962-54069981 None:intergenic 70.0%
TGGTCCCCAGCACGGGCCAT+AGG - chr4_2:54069963-54069982 None:intergenic 70.0%
ATGGCCCGTGCTGGGGACCA+TGG + chr4_2:54069963-54069982 Msa0607280:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 54066754 54074931 54066754 ID=Msa0607280;Name=Msa0607280
chr4_2 mRNA 54066754 54074931 54066754 ID=Msa0607280-mRNA-1;Parent=Msa0607280;Name=Msa0607280-mRNA-1;_AED=0.06;_eAED=0.06;_QI=225|1|1|1|1|1|9|338|693
chr4_2 exon 54066754 54067234 54066754 ID=Msa0607280-mRNA-1:exon:13444;Parent=Msa0607280-mRNA-1
chr4_2 exon 54070256 54070335 54070256 ID=Msa0607280-mRNA-1:exon:13445;Parent=Msa0607280-mRNA-1
chr4_2 exon 54070423 54070884 54070423 ID=Msa0607280-mRNA-1:exon:13446;Parent=Msa0607280-mRNA-1
chr4_2 exon 54071163 54071285 54071163 ID=Msa0607280-mRNA-1:exon:13447;Parent=Msa0607280-mRNA-1
chr4_2 exon 54071661 54071792 54071661 ID=Msa0607280-mRNA-1:exon:13448;Parent=Msa0607280-mRNA-1
chr4_2 exon 54071959 54072243 54071959 ID=Msa0607280-mRNA-1:exon:13449;Parent=Msa0607280-mRNA-1
chr4_2 exon 54072848 54073120 54072848 ID=Msa0607280-mRNA-1:exon:13450;Parent=Msa0607280-mRNA-1
chr4_2 exon 54073208 54073315 54073208 ID=Msa0607280-mRNA-1:exon:13451;Parent=Msa0607280-mRNA-1
chr4_2 exon 54074231 54074931 54074231 ID=Msa0607280-mRNA-1:exon:13452;Parent=Msa0607280-mRNA-1
chr4_2 five_prime_UTR 54066754 54066978 54066754 ID=Msa0607280-mRNA-1:five_prime_utr;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54066979 54067234 54066979 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54070256 54070335 54070256 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54070423 54070884 54070423 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54071163 54071285 54071163 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54071661 54071792 54071661 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54071959 54072243 54071959 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54072848 54073120 54072848 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54073208 54073315 54073208 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 CDS 54074231 54074593 54074231 ID=Msa0607280-mRNA-1:cds;Parent=Msa0607280-mRNA-1
chr4_2 three_prime_UTR 54074594 54074931 54074594 ID=Msa0607280-mRNA-1:three_prime_utr;Parent=Msa0607280-mRNA-1
Gene Sequence

>Msa0607280

ATGGAGATTGAAGCAGCAAGTGGTAGCAACAACAAAGGATGCAACATGGACGAGAGTGATGAGGAAGCATATTGTGGTCTTAATAGAGGAAGCTTCTTAGCATGGGAAGATCTAAGAGTTATGTTGCCAAATTTTGGGAAAGGACCAACTAAAAGGTTGCTTAATGGACTAAATGGTTTTGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACTTTGCTTGATACACTTGCAGGTAGACTTGCAAAAAATGTGGTAATGACAGGAAATGTTCTTCTCAATGGGAAGAAAAAAACTCCAGGCTATGGTTTTGTTGCATACGTAACGCAAGAAGATGTGTTGTTAGGAACTCTTACAGTGAAAGAAACGATAACATATTCAGCACATTTACGTCTTCCATCAACAATGTCCAAAGAAGAAATCAGCGGCTTAGTTGATGCAACAATCATTGAAATGGGTCTCCATGACTGTGCAGATAGGTTAATAGGTAACTGGCATTTGAGAGGTATAAGTGGTGGCGAAAGGAAAAGAACTAGCATTGCACTTGAGATTCTCACAAGGCCTCGGTTACTGTTCCTTGATGAACCGACTAGTGGTTTGGACAGTGCATCTGCATTTTTTGTTGTTCAAACTCTTAGAAATTGTGCTCGTGATGGAAGGACTGTTATTTCTTCTATTCATCAGCCTAGCAGTGAAGTCTTTGCACTTTTTGATGATCTTTTCTTGCTCTCTAGTGGCGAAACTGTTTATTTTGGTGAAGCTAAAATGGCAATCGAGTTTTTTGCTGAAGCCGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCATTTCCTAAGATGCATCAATTCTGACTTTGACGTTGTAACGGCTACACTGAAGGGATCTCAAAGGATTCCTGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCACAAATTAAGTCGATGCTAGTTGAGAGATTTAAGCGTTCAACGTATGCCAGAAGGGTAAAAGACAAGATTCAAGAACAATCAACCAATGAAGGGCTTGAAACTGAGATAAACCTTGGAAGCCAAGCTAGTTGGTGGAAGCAACTCAAAACACTGACAAGGAGATCATTTGTGAACATGTGTAGAGATGTTGGTTACTACTGGCTGAGGATTATGATCTATATCATTGTATCTATATGTGTTGGAACTATCTATTTTGATATTGGCTACGGCTACACTTCCATCTTGGCTCGTGGTGCCTGTGGTGCATTTATATCAGGATTTATGACTTTCATGTCAATTGGAGGCTTTCCATCTTTTATTGAAGAAATGAAGGTATTTTATAGAGAAAGAATGAATGGATATTATGGCGTAGCAGCATTTATTTTATCAAACTTTCTTTCATCATTCCCGTTCTTGGTTGCTATTGCTCTTACTTCTTGCACAATCACATATAACATGGTGAAATTCAGGCCAGGATTCATTCACTATGCGTTTTTCACTGTTAACATCTATGGATGCATCTCAGTGATTGAGAGTCTCATGATGGTTGTAGCTGCACTTGTTCCAAATTTTCTCATGGGAATCATTACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTTAGGTTGCTATCTGATCTTCCAAAACCTGTTTGGCGCTATCCAATTTCATATATCAGTTACGGTGCATGGGCGATACAGGGTTCATACAAGAATGACTTGCTTGGTCTTGAGTTTGATCCACTACTCCCAGGTAACCCAAAACTGACAGGAGAATATGTGATAACACACATGTTAGGGATTGAATTAAGCCATTCCAAGTGGTGGGACTTGGCAGCACTTTTCCTCCTTCTCTTATGTTACAGGATATTGTTCTTTGTTGTTCTCAAGTTCAAGGAAAGAGCATCACCATTATATAGAAAACTTACTGCCAAAAGAACCATACAACAGCTTGAGAAAAGACCTTCTTTCAGGAAAATGCCATCTGTTACTACTTCCAGGAGGCATCAACCCCTTCATTCACTATCTTCTCAAGAGGGTCTTGATTCTCCACTCCACACCTAG
Protein sequence

>Msa0607280

MEIEAASGSNNKGCNMDESDEEAYCGLNRGSFLAWEDLRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNVVMTGNVLLNGKKKTPGYGFVAYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEISGLVDATIIEMGLHDCADRLIGNWHLRGISGGERKRTSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNCARDGRTVISSIHQPSSEVFALFDDLFLLSSGETVYFGEAKMAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIPDVPNSADPFMNLATAQIKSMLVERFKRSTYARRVKDKIQEQSTNEGLETEINLGSQASWWKQLKTLTRRSFVNMCRDVGYYWLRIMIYIIVSICVGTIYFDIGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERMNGYYGVAAFILSNFLSSFPFLVAIALTSCTITYNMVKFRPGFIHYAFFTVNIYGCISVIESLMMVVAALVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFDPLLPGNPKLTGEYVITHMLGIELSHSKWWDLAALFLLLLCYRILFFVVLKFKERASPLYRKLTAKRTIQQLEKRPSFRKMPSVTTSRRHQPLHSLSSQEGLDSPLHT*