AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0253980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0253980 MtrunA17_Chr2g0313941 90.022 451 45 0 1 451 1 451 0.0 834
Msa0253980 MtrunA17_Chr7g0259181 33.850 452 266 13 12 446 27 462 3.32e-64 214
Msa0253980 MtrunA17_Chr2g0314171 33.333 468 271 15 2 446 28 477 5.25e-57 195
Msa0253980 MtrunA17_Chr2g0319411 35.127 353 206 9 12 350 21 364 9.45e-52 179
Msa0253980 MtrunA17_Chr2g0319401 40.000 280 161 6 3 282 17 289 1.34e-50 175
Msa0253980 MtrunA17_Chr2g0319431 32.861 353 214 10 68 411 7 345 8.08e-49 171
Msa0253980 MtrunA17_Chr1g0156971 32.227 422 251 16 27 430 99 503 3.05e-41 154
Msa0253980 MtrunA17_Chr2g0314181 34.194 310 186 10 10 306 25 329 6.45e-34 130
Msa0253980 MtrunA17_Chr1g0212411 29.787 282 174 6 2 277 21 284 1.14e-32 126
Msa0253980 MtrunA17_Chr2g0311161 32.080 399 204 17 4 353 55 435 5.15e-32 127
Msa0253980 MtrunA17_Chr5g0394141 28.302 477 287 13 11 446 30 492 1.41e-31 126
Msa0253980 MtrunA17_Chr4g0014451 31.392 309 184 11 13 303 3 301 5.83e-28 113
Msa0253980 MtrunA17_Chr8g0335381 28.186 408 249 15 11 400 20 401 1.96e-27 114
Msa0253980 MtrunA17_Chr6g0458491 30.328 366 222 15 62 409 118 468 4.07e-27 113
Msa0253980 MtrunA17_Chr1g0212391 31.835 267 158 8 5 261 18 270 2.84e-26 108
Msa0253980 MtrunA17_Chr5g0394131 24.364 472 302 11 18 444 26 487 9.23e-26 109
Msa0253980 MtrunA17_Chr4g0041581 26.484 438 304 11 5 434 15 442 1.63e-25 108
Msa0253980 MtrunA17_Chr4g0041631 25.941 478 276 16 13 445 19 463 9.65e-25 106
Msa0253980 MtrunA17_Chr2g0319391 38.667 150 89 3 68 216 8 155 1.80e-23 96.3
Msa0253980 MtrunA17_Chr3g0096461 24.837 459 306 14 13 447 23 466 2.72e-21 96.3
Msa0253980 MtrunA17_Chr5g0438191 23.371 445 294 12 13 443 13 424 1.17e-20 94.0
Msa0253980 MtrunA17_Chr4g0041601 26.000 450 248 16 13 411 19 434 1.65e-20 94.0
Msa0253980 MtrunA17_Chr7g0231671 24.115 452 319 12 9 445 14 456 7.87e-20 92.0
Msa0253980 MtrunA17_Chr5g0416781 25.000 456 316 13 9 448 14 459 2.14e-19 90.5
Msa0253980 MtrunA17_Chr4g0041681 28.467 274 160 10 9 269 12 262 1.21e-18 86.7
Msa0253980 MtrunA17_Chr3g0083831 26.452 310 191 11 11 303 20 309 2.72e-18 85.5
Msa0253980 MtrunA17_Chr7g0222771 25.000 304 211 8 9 303 19 314 4.50e-18 85.1
Msa0253980 MtrunA17_Chr1g0150411 26.157 432 249 15 10 411 16 407 1.08e-17 85.1
Msa0253980 MtrunA17_Chr0c03g0490011 25.173 433 246 18 13 416 8 391 1.97e-17 84.0
Msa0253980 MtrunA17_Chr1g0212401 40.000 115 65 2 317 431 51 161 4.34e-16 75.9
Msa0253980 MtrunA17_Chr2g0326831 24.841 471 292 17 15 437 71 527 1.72e-15 78.6
Msa0253980 MtrunA17_Chr5g0395131 32.370 173 98 7 244 412 92 249 1.80e-15 76.6
Msa0253980 MtrunA17_Chr7g0222761 22.380 353 251 9 11 351 24 365 5.47e-15 76.6
Msa0253980 MtrunA17_Chr2g0314161 30.534 131 86 2 317 447 2 127 8.92e-15 70.9
Msa0253980 MtrunA17_Chr2g0278121 22.340 470 278 17 7 447 10 421 1.50e-14 75.5
Msa0253980 MtrunA17_Chr8g0363821 24.684 474 276 20 7 445 17 444 1.94e-14 75.1
Msa0253980 MtrunA17_Chr3g0136291 35.211 142 79 5 13 148 14 148 2.76e-14 73.6
Msa0253980 MtrunA17_Chr2g0319421 46.154 78 41 1 3 80 17 93 3.10e-14 69.3
Msa0253980 MtrunA17_Chr2g0303231 28.488 172 118 3 13 179 25 196 9.14e-14 72.8
Msa0253980 MtrunA17_Chr8g0362491 23.656 465 298 19 12 445 24 462 9.87e-14 73.2
Msa0253980 MtrunA17_Chr5g0395121 36.752 117 72 2 318 434 85 199 1.09e-13 70.1
Msa0253980 MtrunA17_Chr2g0325431 24.449 454 261 20 5 424 11 416 2.07e-13 72.0
Msa0253980 MtrunA17_Chr4g0014441 36.170 94 59 1 319 412 15 107 3.37e-13 66.6
Msa0253980 MtrunA17_Chr2g0314191 34.454 119 74 3 319 436 33 148 5.81e-13 67.0
Msa0253980 MtrunA17_Chr8g0362021 23.226 465 293 16 13 445 20 452 7.30e-13 70.1
Msa0253980 MtrunA17_Chr5g0395111 28.846 208 109 8 10 179 26 232 3.14e-12 66.2
Msa0253980 MtrunA17_Chr1g0151571 27.948 229 148 8 5 222 7 229 9.46e-12 66.6
Msa0253980 MtrunA17_Chr1g0150231 29.189 185 121 4 5 179 16 200 1.12e-11 66.6
Msa0253980 MtrunA17_Chr1g0154471 23.667 469 277 21 7 447 11 426 1.33e-11 66.2
Msa0253980 MtrunA17_Chr1g0148641 30.460 174 111 6 10 175 28 199 4.09e-11 64.7
Msa0253980 MtrunA17_Chr5g0438051 32.051 156 84 4 12 148 5 157 4.61e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0253980 AT3G14710.1 28.829 444 277 10 13 445 26 441 1.62e-39 148
Msa0253980 AT4G26340.1 25.893 448 286 13 13 445 2 418 1.96e-23 102
Msa0253980 AT4G10400.2 24.605 443 290 13 13 446 2 409 1.35e-20 94.0
Msa0253980 AT4G10400.3 24.605 443 290 13 13 446 2 409 1.35e-20 94.0
Msa0253980 AT4G10400.1 24.605 443 290 13 13 446 2 409 1.35e-20 94.0
Msa0253980 AT3G03030.1 25.231 432 284 14 13 411 2 427 4.09e-19 90.1
Msa0253980 AT5G22730.1 26.237 465 285 21 10 443 26 463 6.27e-19 89.4
Msa0253980 AT5G22730.3 26.237 465 285 21 10 443 26 463 6.27e-19 89.4
Msa0253980 AT3G59200.2 28.232 379 214 14 12 353 6 363 8.67e-19 88.2
Msa0253980 AT3G59200.1 25.376 465 297 14 12 437 6 459 2.03e-18 88.2
Msa0253980 AT3G03030.2 26.433 314 203 10 13 303 2 310 6.95e-18 85.1
Msa0253980 AT5G38590.2 24.368 435 287 12 13 435 2 406 7.73e-18 85.5
Msa0253980 AT4G26350.1 24.255 470 281 19 13 448 2 430 1.02e-17 85.5
Msa0253980 AT4G14096.2 28.177 362 223 14 10 353 5 347 2.40e-17 84.7
Msa0253980 AT4G14096.1 28.177 362 223 14 10 353 5 347 2.40e-17 84.7
Msa0253980 AT5G56560.2 23.820 445 291 14 15 445 7 417 3.24e-17 84.0
Msa0253980 AT2G42730.1 24.580 476 300 18 12 451 4 456 1.13e-16 82.4
Msa0253980 AT3G03040.1 24.283 453 292 17 13 432 2 436 1.67e-16 82.0
Msa0253980 AT5G56820.1 25.482 467 280 20 1 443 1 423 2.00e-16 81.6
Msa0253980 AT5G53840.1 24.359 468 275 20 10 443 15 437 4.10e-16 80.5
Msa0253980 AT1G16930.2 22.698 467 308 14 6 443 4 446 1.09e-15 79.3
Msa0253980 AT1G16930.1 22.698 467 308 14 6 443 4 446 1.09e-15 79.3
Msa0253980 AT1G16930.3 22.698 467 308 14 6 443 4 446 1.09e-15 79.3
Msa0253980 AT4G09920.1 30.108 186 119 4 13 194 2 180 1.20e-15 78.2
Msa0253980 AT4G09920.5 30.108 186 119 4 13 194 2 180 1.20e-15 78.2
Msa0253980 AT3G42770.1 26.338 467 263 23 15 444 1 423 1.29e-15 79.3
Msa0253980 AT4G09920.2 30.108 186 119 4 13 194 2 180 1.29e-15 77.4
Msa0253980 AT4G09920.4 30.108 186 119 4 13 194 2 180 1.29e-15 77.4
Msa0253980 AT4G09920.3 30.108 186 119 4 13 194 2 180 1.29e-15 77.4
Msa0253980 AT4G14103.3 25.905 359 242 12 10 353 5 354 1.48e-15 78.6
Msa0253980 AT4G14103.1 25.905 359 242 12 10 353 5 354 1.48e-15 78.6
Msa0253980 AT2G26030.3 23.419 427 277 16 13 411 4 408 2.05e-15 78.6
Msa0253980 AT2G26030.1 23.419 427 277 16 13 411 4 408 2.05e-15 78.6
Msa0253980 AT1G06630.9 27.513 378 230 18 1 356 10 365 2.13e-15 78.2
Msa0253980 AT2G26030.4 23.218 435 273 16 13 411 4 413 2.39e-15 78.2
Msa0253980 AT4G14103.2 31.604 212 138 6 10 217 5 213 2.60e-15 78.2
Msa0253980 AT2G29930.3 24.740 481 300 17 3 445 2 458 2.83e-15 78.2
Msa0253980 AT2G29930.1 24.740 481 300 17 3 445 2 458 2.83e-15 78.2
Msa0253980 AT5G56420.1 22.707 458 295 14 9 445 2 421 3.05e-15 77.8
Msa0253980 AT5G56420.2 22.707 458 295 14 9 445 2 421 3.05e-15 77.8
Msa0253980 AT5G56420.3 22.707 458 295 14 9 445 2 421 3.05e-15 77.8
Msa0253980 AT1G06630.2 27.513 378 230 18 1 356 1 356 3.09e-15 77.8
Msa0253980 AT1G06630.6 27.513 378 230 18 1 356 1 356 3.09e-15 77.8
Msa0253980 AT1G06630.4 27.513 378 230 18 1 356 1 356 3.09e-15 77.8
Msa0253980 AT1G06630.3 27.513 378 230 18 1 356 1 356 3.09e-15 77.8
Msa0253980 AT2G29910.3 29.911 224 139 7 9 227 1 211 3.31e-15 77.0
Msa0253980 AT2G29910.2 29.911 224 139 7 9 227 1 211 3.31e-15 77.0
Msa0253980 AT3G60040.5 25.694 432 280 14 1 404 218 636 4.71e-15 78.2
Msa0253980 AT2G29910.5 29.911 224 139 7 9 227 1 211 4.86e-15 76.6
Msa0253980 AT2G29910.7 29.911 224 139 7 9 227 1 211 4.86e-15 76.6
Msa0253980 AT2G29910.4 29.911 224 139 7 9 227 1 211 4.86e-15 76.6
Msa0253980 AT2G29910.1 29.911 224 139 7 9 227 1 211 4.86e-15 76.6
Msa0253980 AT3G60040.2 25.694 432 280 14 1 404 220 638 5.21e-15 77.8
Msa0253980 AT1G06630.1 27.513 378 230 18 1 356 1 356 5.53e-15 77.4
Msa0253980 AT2G29910.6 29.911 224 139 7 9 227 25 235 6.34e-15 76.6
Msa0253980 AT3G59240.1 25.874 429 280 15 12 411 7 426 6.69e-15 77.0
Msa0253980 AT3G60040.3 25.694 432 280 14 1 404 221 639 7.06e-15 77.8
Msa0253980 AT1G06630.5 27.078 373 230 17 1 353 1 351 7.44e-15 76.3
Msa0253980 AT1G06630.8 27.078 373 230 17 1 353 1 351 7.44e-15 76.3
Msa0253980 AT3G60040.4 26.437 435 273 17 1 404 1 419 8.91e-15 77.0
Msa0253980 AT4G27050.2 22.358 492 284 19 11 445 2 452 9.24e-15 76.6
Msa0253980 AT4G27050.3 22.358 492 284 19 11 445 2 452 9.24e-15 76.6
Msa0253980 AT4G27050.5 22.358 492 284 19 11 445 2 452 9.24e-15 76.6
Msa0253980 AT4G27050.4 22.358 492 284 19 11 445 2 452 9.24e-15 76.6
Msa0253980 AT4G27050.1 22.358 492 284 19 11 445 2 452 9.24e-15 76.6
Msa0253980 AT3G60040.1 25.694 432 280 14 1 404 220 638 9.53e-15 77.4
Msa0253980 AT4G13965.1 25.000 420 256 14 5 403 2 383 1.29e-14 75.9
Msa0253980 AT3G58930.3 24.330 485 298 18 13 445 2 469 1.73e-14 75.9
Msa0253980 AT3G58930.1 24.330 485 298 18 13 445 2 469 1.73e-14 75.9
Msa0253980 AT3G58930.5 24.330 485 298 18 13 445 2 469 1.73e-14 75.9
Msa0253980 AT3G58940.1 40.517 116 61 4 13 122 2 115 1.96e-14 75.9
Msa0253980 AT3G58940.2 40.517 116 61 4 13 122 2 115 1.96e-14 75.9
Msa0253980 AT3G59230.1 24.025 487 306 18 5 444 4 473 2.45e-14 75.5
Msa0253980 AT1G06630.7 32.597 181 113 6 1 173 1 180 5.13e-14 73.2
Msa0253980 AT4G00160.1 23.467 473 297 14 2 445 5 441 5.21e-14 74.3
Msa0253980 AT3G26922.1 26.840 231 157 5 13 240 14 235 5.64e-14 72.8
Msa0253980 AT3G26922.2 26.840 231 157 5 13 240 14 235 5.64e-14 72.8
Msa0253980 AT5G56380.2 23.414 457 308 16 13 446 2 439 7.04e-14 73.9
Msa0253980 AT5G56380.1 23.414 457 308 16 13 446 2 439 7.04e-14 73.9
Msa0253980 AT5G44490.2 22.199 473 303 16 5 443 9 450 7.90e-14 73.6
Msa0253980 AT5G44490.1 22.199 473 303 16 5 443 9 450 8.69e-14 73.6
Msa0253980 AT1G55030.2 25.359 418 258 17 13 412 19 400 9.65e-14 73.2
Msa0253980 AT3G59190.1 29.651 172 111 5 10 173 9 178 1.16e-13 72.8
Msa0253980 AT1G48400.1 28.319 226 151 7 12 230 9 230 1.21e-13 73.2
Msa0253980 AT1G55030.1 25.359 418 258 17 13 412 9 390 1.34e-13 72.8
Msa0253980 AT5G41630.1 30.387 181 109 6 10 175 9 187 1.45e-13 72.8
Msa0253980 AT1G48400.2 33.333 147 92 3 12 152 9 155 1.51e-13 72.8
Msa0253980 AT3G59190.2 29.050 179 117 5 3 173 2 178 2.37e-13 72.4
Msa0253980 AT3G58860.1 25.424 354 234 13 13 353 7 343 2.50e-13 72.0
Msa0253980 AT3G58900.4 25.366 410 258 17 13 385 2 400 2.85e-13 72.0
Msa0253980 AT5G56410.1 24.292 424 268 16 20 412 10 411 3.33e-13 72.0
Msa0253980 AT3G58880.1 25.205 365 241 15 13 357 3 355 3.38e-13 71.6
Msa0253980 AT3G50710.1 20.524 458 302 15 13 443 2 424 3.44e-13 71.6
Msa0253980 AT1G78840.1 23.991 446 308 15 12 443 4 432 4.07e-13 71.2
Msa0253980 AT1G78840.2 23.991 446 308 15 12 443 4 432 4.07e-13 71.2
Msa0253980 AT1G52650.1 24.821 419 269 16 13 400 2 405 5.55e-13 71.2
Msa0253980 AT3G49030.1 24.236 458 294 17 11 448 19 443 5.74e-13 70.9
Msa0253980 AT4G13960.2 24.537 432 268 16 13 407 2 412 6.27e-13 70.9
Msa0253980 AT4G13960.1 24.537 432 268 16 13 407 2 412 6.27e-13 70.9
Msa0253980 AT3G49150.1 33.140 172 106 6 10 175 13 181 7.90e-13 70.5
Msa0253980 AT3G52680.1 21.674 466 312 12 2 445 10 444 8.76e-13 70.5
Msa0253980 AT5G38392.1 32.886 149 89 4 13 152 2 148 1.68e-12 67.0
Msa0253980 AT1G58310.1 26.720 378 233 13 12 353 7 376 1.95e-12 69.7
Msa0253980 AT5G22610.1 25.974 462 267 21 13 444 18 434 3.04e-12 68.9
Msa0253980 AT3G59210.2 24.946 465 307 17 12 444 6 460 3.07e-12 68.9
Msa0253980 AT3G59210.1 24.946 465 307 17 12 444 6 460 3.07e-12 68.9
Msa0253980 AT3G59210.5 24.946 465 307 17 12 444 6 460 3.07e-12 68.9
Msa0253980 AT3G59210.4 24.946 465 307 17 12 444 6 460 3.07e-12 68.9
Msa0253980 AT3G59210.3 24.946 465 307 17 12 444 6 460 3.07e-12 68.9
Msa0253980 AT5G25860.1 25.466 483 286 22 1 445 1 447 3.29e-12 68.6
Msa0253980 AT5G60610.2 24.941 425 255 16 13 412 2 387 3.88e-12 68.2
Msa0253980 AT5G60610.1 24.941 425 255 16 13 412 2 387 3.88e-12 68.2
Msa0253980 AT1G69630.1 35.233 193 99 10 1 178 1 182 4.33e-12 68.2
Msa0253980 AT3G49040.1 30.180 222 126 8 13 221 17 222 4.95e-12 67.0
Msa0253980 AT5G22730.2 27.151 372 223 17 10 354 26 376 5.59e-12 67.8
Msa0253980 AT5G38590.1 26.636 214 146 4 13 223 2 207 9.83e-12 65.9
Msa0253980 AT3G58900.3 36.641 131 73 5 13 135 2 130 1.05e-11 66.2
Msa0253980 AT5G41830.2 30.387 181 101 7 1 158 1 179 1.19e-11 67.0
Msa0253980 AT1G78750.2 31.915 188 115 6 1 176 1 187 1.26e-11 67.0
Msa0253980 AT1G78750.1 31.915 188 115 6 1 176 1 187 1.26e-11 67.0
Msa0253980 AT3G49030.2 28.241 216 142 5 11 221 19 226 1.26e-11 66.6
Msa0253980 AT4G10410.1 30.636 173 106 4 27 197 1 161 1.29e-11 65.5
Msa0253980 AT3G58900.2 36.641 131 73 5 13 135 2 130 1.60e-11 65.9
Msa0253980 AT3G58900.1 36.641 131 73 5 13 135 2 130 1.60e-11 65.9
Msa0253980 AT1G80470.1 23.237 482 277 19 3 443 5 434 1.90e-11 66.2
Msa0253980 AT1G64540.1 27.326 344 192 15 12 346 4 298 1.98e-11 66.2
Msa0253980 AT1G64540.2 27.326 344 192 15 12 346 4 298 1.98e-11 66.2
Msa0253980 AT2G04230.1 30.526 190 122 6 1 183 1 187 3.99e-11 65.1
Msa0253980 AT5G22610.2 33.333 144 82 3 13 148 18 155 4.00e-11 65.5
Msa0253980 AT5G56560.1 28.502 207 140 4 15 220 7 206 6.30e-11 65.1
Msa0253980 AT1G66310.1 24.576 472 268 22 11 443 17 439 6.40e-11 64.7
Msa0253980 AT5G53640.1 30.435 138 90 1 11 148 20 151 7.02e-11 62.4
Msa0253980 AT5G56690.1 23.833 407 250 15 15 392 4 379 7.08e-11 64.3
Msa0253980 AT3G59000.2 27.273 231 155 7 13 235 2 227 7.78e-11 63.9
Msa0253980 AT3G58960.1 25.275 364 235 14 13 353 2 351 9.77e-11 63.9

Find 76 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTAGGTGCATGAAATTT+TGG 0.134431 2_2:-46494747 None:intergenic
TTCAAAGTATTTCAGTTTAA+AGG 0.139696 2_2:+46494003 Msa0253980:CDS
TTCAAGATCCTATTTGTTTC+TGG 0.143234 2_2:-46494469 None:intergenic
AATAGTGCGAGATATGATTT+TGG 0.275933 2_2:-46494595 None:intergenic
AAACAAGAGTGTTAAGAATA+GGG 0.284563 2_2:-46493499 None:intergenic
CAAGAAGATGGATTGATGTT+TGG 0.317460 2_2:+46492475 Msa0253980:CDS
ATCATGTAAATATGCCATTA+AGG 0.324990 2_2:+46493040 Msa0253980:CDS
AAACGAGTTGAAGAAATTAA+AGG 0.325615 2_2:+46494379 Msa0253980:three_prime_UTR
TGTTGTTGATGAAGATAAAA+AGG 0.327183 2_2:+46493163 Msa0253980:CDS
GCGAGATTCTAGCCCTAATA+AGG 0.330986 2_2:+46494403 Msa0253980:three_prime_UTR
TTCACCAATCTGCCAGTCTT+TGG 0.338505 2_2:+46493410 Msa0253980:CDS
GCGTCGACTATGAACCTTAA+TGG 0.342754 2_2:-46493054 None:intergenic
AAAACAAGAGTGTTAAGAAT+AGG 0.349193 2_2:-46493500 None:intergenic
AATGTGACATTAAAAGAAAA+TGG 0.362171 2_2:-46494708 None:intergenic
TTGTCAATCCAGAAACAAAT+AGG 0.368465 2_2:+46494461 Msa0253980:three_prime_UTR
TCTCCTACTGTTGTTTCCCT+TGG 0.376624 2_2:-46492360 None:intergenic
TTAAGCAAAGGGAGAAGCTT+AGG 0.380159 2_2:-46492620 None:intergenic
AAACTAATGTTCTGTGTTGT+TGG 0.384561 2_2:-46492960 None:intergenic
GAACGAGCACGATCTTTGTT+TGG 0.397360 2_2:+46494035 Msa0253980:CDS
TACATGATTCATTTGAATGA+TGG 0.398273 2_2:-46493025 None:intergenic
GCAAATCACATTGTACGTTA+AGG 0.402625 2_2:+46491551 Msa0253980:five_prime_UTR
TTCCTTGAACGTTTGCATAT+TGG 0.406253 2_2:+46494646 Msa0253980:three_prime_UTR
ATAGCATTGCAAAATGTAAG+AGG 0.408495 2_2:+46494307 Msa0253980:three_prime_UTR
GCTTCAAACACTTTGAGAAT+CGG 0.411946 2_2:-46492921 None:intergenic
CTTCAAACACTTTGAGAATC+GGG 0.419619 2_2:-46492920 None:intergenic
CCTTCCAAAGACTGGCAGAT+TGG 0.420705 2_2:-46493414 None:intergenic
TGTTGATTTGAAGAAAGTTA+AGG 0.423111 2_2:+46494134 Msa0253980:CDS
TGTTAAGAATAGGGGAATTG+TGG 0.424474 2_2:-46493490 None:intergenic
ACATGAAAGCATTCTTAGTC+AGG 0.433079 2_2:+46492404 Msa0253980:CDS
CTCAAAGTGTTTGAAGCTAG+AGG 0.446938 2_2:+46492927 Msa0253980:CDS
GGAAGGAAGGAAAACTTTAT+CGG 0.450001 2_2:-46492730 None:intergenic
GGATTTGCTTTATCTTAGAA+AGG 0.458843 2_2:+46492679 Msa0253980:CDS
TACCAATATGCAAACGTTCA+AGG 0.467526 2_2:-46494648 None:intergenic
TGAACGTTTGCATATTGGTA+TGG 0.468094 2_2:+46494651 Msa0253980:three_prime_UTR
GTTGGCAGATGCAGCAATCA+TGG 0.478397 2_2:+46494068 Msa0253980:CDS
GTGCCAACCGCGTCTACGAT+TGG 0.486647 2_2:-46492441 None:intergenic
TTCATGACTAGTTAAGCAAA+GGG 0.501671 2_2:-46492631 None:intergenic
ATGCATCTAAGTTAAGTGAA+TGG 0.503705 2_2:+46492658 Msa0253980:CDS
ATCGAAAACGTCTCAAGTAA+AGG 0.503819 2_2:-46492990 None:intergenic
CCCTCGTAAGAGAAATCTGT+TGG 0.503829 2_2:-46493077 None:intergenic
CCAACAGATTTCTCTTACGA+GGG 0.510326 2_2:+46493077 Msa0253980:CDS
ATTGCAGCTTAAAAGTGAAT+CGG 0.512067 2_2:-46492751 None:intergenic
AACAGAAGCATTACTAATTG+AGG 0.513131 2_2:-46493135 None:intergenic
TTGCAGTTGTTAGAACACTT+TGG 0.513678 2_2:-46494174 None:intergenic
AACTTATCTGCAACTAAATG+AGG 0.518407 2_2:+46493439 Msa0253980:CDS
TAAGTTAACCTTCCAAAGAC+TGG 0.524652 2_2:-46493422 None:intergenic
CTAGCGTCTTATCAAGAAGA+TGG 0.524776 2_2:+46492463 Msa0253980:CDS
AACAAGAGTGTTAAGAATAG+GGG 0.527875 2_2:-46493498 None:intergenic
CCAATCTGCCAGTCTTTGGA+AGG 0.536874 2_2:+46493414 Msa0253980:CDS
ATTCCAATCGTAGACGCGGT+TGG 0.544371 2_2:+46492438 Msa0253980:CDS
CCCAACAGATTTCTCTTACG+AGG 0.544682 2_2:+46493076 Msa0253980:CDS
TAGGATCTTGAACACACAGC+AGG 0.556086 2_2:+46494480 Msa0253980:three_prime_UTR
TGGCACCTCTACGAAGAAGT+TGG 0.558270 2_2:+46494558 Msa0253980:three_prime_UTR
ATTCATGACTAGTTAAGCAA+AGG 0.566919 2_2:-46492632 None:intergenic
GGAGATGATGATGATATCGC+CGG 0.568358 2_2:+46494089 Msa0253980:CDS
CTGCAACTAAATGAGGTCAC+TGG 0.573768 2_2:+46493446 Msa0253980:CDS
TTAAAAGTGAATCGGAAGGA+AGG 0.580749 2_2:-46492743 None:intergenic
TCAAAGTGTTTGAAGCTAGA+GGG 0.585679 2_2:+46492928 Msa0253980:CDS
CTACGATTGGAATGAATGAC+AGG 0.587451 2_2:-46492428 None:intergenic
CCTCGTAAGAGAAATCTGTT+GGG 0.591315 2_2:-46493076 None:intergenic
TTGTTTGGTAAAATTCGTGT+TGG 0.601366 2_2:+46494050 Msa0253980:CDS
AGATGTCTTTACTTCTGCAA+CGG 0.610724 2_2:+46493957 Msa0253980:CDS
TTGAAGCTAGAGGGTGCGAA+TGG 0.623897 2_2:+46492937 Msa0253980:CDS
TTGTTGAAGTCACAGTAGAG+TGG 0.626409 2_2:+46494525 Msa0253980:three_prime_UTR
CTTTCTTGAAAAGACATGAG+AGG 0.630559 2_2:-46494619 None:intergenic
GGAAACCAACTTCTTCGTAG+AGG 0.634240 2_2:-46494563 None:intergenic
CAGCTTAAAAGTGAATCGGA+AGG 0.637096 2_2:-46492747 None:intergenic
AGGATCTTGAACACACAGCA+GGG 0.639925 2_2:+46494481 Msa0253980:three_prime_UTR
AGTAGAGTGGCATTGCGACA+TGG 0.642468 2_2:+46494538 Msa0253980:three_prime_UTR
GGTAGTCATGGATTCACCAA+GGG 0.655137 2_2:+46492344 Msa0253980:exon
TCACCAAGGGAAACAACAGT+AGG 0.661012 2_2:+46492357 Msa0253980:CDS
TCTCAAACAAATCGATAACG+TGG 0.671900 2_2:+46493223 Msa0253980:CDS
ATTCATTCCAATCGTAGACG+CGG 0.688770 2_2:+46492434 Msa0253980:CDS
AAGATGTTCAAAACACGACA+CGG 0.690131 2_2:+46494227 Msa0253980:exon
AGGTAGTCATGGATTCACCA+AGG 0.701421 2_2:+46492343 Msa0253980:exon
AAGCTTGACAGAAAGCAGTG+AGG 0.745455 2_2:-46493982 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAATTATTATTCGATA+TGG + chr2_2:46492031-46492050 Msa0253980:intron 10.0%
!! ATATAATTATTATTCGATAT+GGG + chr2_2:46492032-46492051 Msa0253980:intron 10.0%
!! TCTTCTTTCAAAAAAAAAAA+AGG + chr2_2:46491585-46491604 Msa0253980:five_prime_UTR 15.0%
!! TTAAGATATTTATTTCCTAA+AGG + chr2_2:46491918-46491937 Msa0253980:intron 15.0%
!!! AAGTTAATTGTAAATTTGTT+AGG - chr2_2:46491953-46491972 None:intergenic 15.0%
!! AACAAATTTACAATTAACTT+TGG + chr2_2:46491953-46491972 Msa0253980:intron 15.0%
!! ATGAACAATAAATATAATTG+AGG - chr2_2:46492009-46492028 None:intergenic 15.0%
!! ATTAAATTTCTTTGAACAAA+AGG - chr2_2:46493552-46493571 None:intergenic 15.0%
!!! TTAGTAATTTTTCCTTATTA+GGG - chr2_2:46494418-46494437 None:intergenic 15.0%
!!! ATTAGTAATTTTTCCTTATT+AGG - chr2_2:46494419-46494438 None:intergenic 15.0%
!! ACAAAAAAATTCATTCTTCT+TGG - chr2_2:46491475-46491494 None:intergenic 20.0%
!!! TTTTATACAGGTTCATAATT+TGG + chr2_2:46491818-46491837 Msa0253980:intron 20.0%
!!! GTTTTACTTAATGTAAGTTT+AGG + chr2_2:46493518-46493537 Msa0253980:intron 20.0%
!!! AGTGTTTATTTTTTTGAAGA+AGG - chr2_2:46493648-46493667 None:intergenic 20.0%
!!! ATTAATTTGTTTATCCAGAA+AGG + chr2_2:46493847-46493866 Msa0253980:intron 20.0%
!!! TTAATTTGTTTATCCAGAAA+GGG + chr2_2:46493848-46493867 Msa0253980:intron 20.0%
!!! TTCAAAGTATTTCAGTTTAA+AGG + chr2_2:46494003-46494022 Msa0253980:CDS 20.0%
!! AATGTGACATTAAAAGAAAA+TGG - chr2_2:46494711-46494730 None:intergenic 20.0%
! ACTACCATTCAATATAAACT+CGG - chr2_2:46491672-46491691 None:intergenic 25.0%
! ATGAACCTGTATAAAAGTTA+CGG - chr2_2:46491814-46491833 None:intergenic 25.0%
!! TAGCTTTTTGATATCAAGTT+AGG - chr2_2:46491851-46491870 None:intergenic 25.0%
! GATATTTATTTCCTAAAGGA+TGG + chr2_2:46491922-46491941 Msa0253980:intron 25.0%
!! TTATGATCACACATTCTTTT+TGG + chr2_2:46492079-46492098 Msa0253980:intron 25.0%
! TAATATCAGTGAATAAATCC+TGG + chr2_2:46492124-46492143 Msa0253980:intron 25.0%
! TAAGAAGAAAAAGATGCAAA+AGG + chr2_2:46492542-46492561 Msa0253980:CDS 25.0%
! TTCAAAAACTTAGCATTTCT+GGG + chr2_2:46492844-46492863 Msa0253980:CDS 25.0%
!! AGTTATATCTTTTGAACAAG+TGG - chr2_2:46492892-46492911 None:intergenic 25.0%
! TACATGATTCATTTGAATGA+TGG - chr2_2:46493028-46493047 None:intergenic 25.0%
! ATCATGTAAATATGCCATTA+AGG + chr2_2:46493040-46493059 Msa0253980:CDS 25.0%
!! TGTTGTTGATGAAGATAAAA+AGG + chr2_2:46493163-46493182 Msa0253980:CDS 25.0%
! TGAAGATAAAAAGGATAGAA+TGG + chr2_2:46493172-46493191 Msa0253980:CDS 25.0%
!!! GCTAAAGTTATTGTTTTACA+AGG + chr2_2:46493250-46493269 Msa0253980:CDS 25.0%
!! TTTCTTTTACGATACATGAA+CGG + chr2_2:46493280-46493299 Msa0253980:intron 25.0%
!!! AAACAAGAGTGTTAAGAATA+GGG - chr2_2:46493502-46493521 None:intergenic 25.0%
!!! AAAACAAGAGTGTTAAGAAT+AGG - chr2_2:46493503-46493522 None:intergenic 25.0%
! AGTGTTTATACTAGTAGATA+AGG - chr2_2:46493618-46493637 None:intergenic 25.0%
! GAGTTTATGAAAACAACTTA+AGG - chr2_2:46493716-46493735 None:intergenic 25.0%
! ATAGCTTATATGAAATCAGT+TGG + chr2_2:46493762-46493781 Msa0253980:intron 25.0%
! AACATAACTGCTTATGTATA+AGG - chr2_2:46493816-46493835 None:intergenic 25.0%
! TCATGACACAAAAAAATTTC+AGG + chr2_2:46493915-46493934 Msa0253980:intron 25.0%
! CATGACACAAAAAAATTTCA+GGG + chr2_2:46493916-46493935 Msa0253980:intron 25.0%
!!! TGTTGATTTGAAGAAAGTTA+AGG + chr2_2:46494134-46494153 Msa0253980:CDS 25.0%
!! AAACGAGTTGAAGAAATTAA+AGG + chr2_2:46494379-46494398 Msa0253980:three_prime_UTR 25.0%
!!! ATATGATTTTGGTTTCTGTT+TGG - chr2_2:46494587-46494606 None:intergenic 25.0%
!!! GAATTTTTTTGTGAAGCTCT+AGG + chr2_2:46491483-46491502 Msa0253980:five_prime_UTR 30.0%
! AGGCTTATATTCATTTTGAG+AGG + chr2_2:46491503-46491522 Msa0253980:five_prime_UTR 30.0%
GAAACCGAGTTTATATTGAA+TGG + chr2_2:46491665-46491684 Msa0253980:intron 30.0%
TTAGAAGAGAAATTCAAGAG+TGG + chr2_2:46491713-46491732 Msa0253980:intron 30.0%
AGTTACGGCTTAAAATTTCT+GGG - chr2_2:46491799-46491818 None:intergenic 30.0%
AAGTTACGGCTTAAAATTTC+TGG - chr2_2:46491800-46491819 None:intergenic 30.0%
! TTAAGCCGTAACTTTTATAC+AGG + chr2_2:46491806-46491825 Msa0253980:intron 30.0%
!!! TTTTTGGTCTTAACAAGCTT+TGG + chr2_2:46492095-46492114 Msa0253980:intron 30.0%
!!! GATTTTGATGATAGTTTGCT+CGG + chr2_2:46492516-46492535 Msa0253980:CDS 30.0%
! TTCATGACTAGTTAAGCAAA+GGG - chr2_2:46492634-46492653 None:intergenic 30.0%
! ATTCATGACTAGTTAAGCAA+AGG - chr2_2:46492635-46492654 None:intergenic 30.0%
ATGCATCTAAGTTAAGTGAA+TGG + chr2_2:46492658-46492677 Msa0253980:CDS 30.0%
! GGATTTGCTTTATCTTAGAA+AGG + chr2_2:46492679-46492698 Msa0253980:CDS 30.0%
ATTGCAGCTTAAAAGTGAAT+CGG - chr2_2:46492754-46492773 None:intergenic 30.0%
!! TGCTAAGTTTTTGAAGGTTT+TGG - chr2_2:46492839-46492858 None:intergenic 30.0%
! CAGAAATGCTAAGTTTTTGA+AGG - chr2_2:46492845-46492864 None:intergenic 30.0%
CTTCAAAAACTTAGCATTTC+TGG + chr2_2:46492843-46492862 Msa0253980:CDS 30.0%
TCAAAAACTTAGCATTTCTG+GGG + chr2_2:46492845-46492864 Msa0253980:CDS 30.0%
AAACTAATGTTCTGTGTTGT+TGG - chr2_2:46492963-46492982 None:intergenic 30.0%
!! AACAGAAGCATTACTAATTG+AGG - chr2_2:46493138-46493157 None:intergenic 30.0%
! TAAATTTTTCCTTGTCCTAC+AGG + chr2_2:46493364-46493383 Msa0253980:intron 30.0%
AACTTATCTGCAACTAAATG+AGG + chr2_2:46493439-46493458 Msa0253980:CDS 30.0%
!! AACAAGAGTGTTAAGAATAG+GGG - chr2_2:46493501-46493520 None:intergenic 30.0%
!! GTTGTTTTCATAAACTCTCT+AGG + chr2_2:46493719-46493738 Msa0253980:intron 30.0%
TTGTTTGGTAAAATTCGTGT+TGG + chr2_2:46494050-46494069 Msa0253980:CDS 30.0%
ATAGCATTGCAAAATGTAAG+AGG + chr2_2:46494307-46494326 Msa0253980:three_prime_UTR 30.0%
TTGTCAATCCAGAAACAAAT+AGG + chr2_2:46494461-46494480 Msa0253980:three_prime_UTR 30.0%
TTCAAGATCCTATTTGTTTC+TGG - chr2_2:46494472-46494491 None:intergenic 30.0%
! AATAGTGCGAGATATGATTT+TGG - chr2_2:46494598-46494617 None:intergenic 30.0%
!! CTTTTTGTGTAGTTGATACT+TGG - chr2_2:46494688-46494707 None:intergenic 30.0%
GCAAATCACATTGTACGTTA+AGG + chr2_2:46491551-46491570 Msa0253980:five_prime_UTR 35.0%
GTTAGGAAATTCCATCCTTT+AGG - chr2_2:46491936-46491955 None:intergenic 35.0%
GTGCTTAAGTTATGGACTTA+TGG + chr2_2:46492238-46492257 Msa0253980:intron 35.0%
!! TGTCATTTGTTATGTGTACC+AGG + chr2_2:46492311-46492330 Msa0253980:intron 35.0%
!! ACATGAAAGCATTCTTAGTC+AGG + chr2_2:46492404-46492423 Msa0253980:CDS 35.0%
!! CAAGAAGATGGATTGATGTT+TGG + chr2_2:46492475-46492494 Msa0253980:CDS 35.0%
GGAAGGAAGGAAAACTTTAT+CGG - chr2_2:46492733-46492752 None:intergenic 35.0%
TTAAAAGTGAATCGGAAGGA+AGG - chr2_2:46492746-46492765 None:intergenic 35.0%
!! TTTTGGAGACAAACAGATAC+GGG - chr2_2:46492822-46492841 None:intergenic 35.0%
!!! GTTTTGGAGACAAACAGATA+CGG - chr2_2:46492823-46492842 None:intergenic 35.0%
! CTTCAAACACTTTGAGAATC+GGG - chr2_2:46492923-46492942 None:intergenic 35.0%
! GCTTCAAACACTTTGAGAAT+CGG - chr2_2:46492924-46492943 None:intergenic 35.0%
! TCAAAGTGTTTGAAGCTAGA+GGG + chr2_2:46492928-46492947 Msa0253980:CDS 35.0%
ATCGAAAACGTCTCAAGTAA+AGG - chr2_2:46492993-46493012 None:intergenic 35.0%
! AGACGTTTTCGATAGCAATA+TGG + chr2_2:46493000-46493019 Msa0253980:CDS 35.0%
TCTCAAACAAATCGATAACG+TGG + chr2_2:46493223-46493242 Msa0253980:CDS 35.0%
TAAGTTAACCTTCCAAAGAC+TGG - chr2_2:46493425-46493444 None:intergenic 35.0%
TGTTAAGAATAGGGGAATTG+TGG - chr2_2:46493493-46493512 None:intergenic 35.0%
!! GACTTTTTGAGAGAGCTTAT+AGG + chr2_2:46493673-46493692 Msa0253980:intron 35.0%
TATGTAACAAAGACCCTTTC+TGG - chr2_2:46493864-46493883 None:intergenic 35.0%
AGATGTCTTTACTTCTGCAA+CGG + chr2_2:46493957-46493976 Msa0253980:CDS 35.0%
TTGCAGTTGTTAGAACACTT+TGG - chr2_2:46494177-46494196 None:intergenic 35.0%
AAGATGTTCAAAACACGACA+CGG + chr2_2:46494227-46494246 Msa0253980:exon 35.0%
CTTTCTTGAAAAGACATGAG+AGG - chr2_2:46494622-46494641 None:intergenic 35.0%
!! CTCTCATGTCTTTTCAAGAA+AGG + chr2_2:46494620-46494639 Msa0253980:three_prime_UTR 35.0%
TTCCTTGAACGTTTGCATAT+TGG + chr2_2:46494646-46494665 Msa0253980:three_prime_UTR 35.0%
TACCAATATGCAAACGTTCA+AGG - chr2_2:46494651-46494670 None:intergenic 35.0%
TGAACGTTTGCATATTGGTA+TGG + chr2_2:46494651-46494670 Msa0253980:three_prime_UTR 35.0%
! GGTCTTAACAAGCTTTGGTT+AGG + chr2_2:46492100-46492119 Msa0253980:intron 40.0%
AAGTCCATAACTTAAGCACG+CGG - chr2_2:46492237-46492256 None:intergenic 40.0%
CTACGATTGGAATGAATGAC+AGG - chr2_2:46492431-46492450 None:intergenic 40.0%
ATTCATTCCAATCGTAGACG+CGG + chr2_2:46492434-46492453 Msa0253980:CDS 40.0%
CTAGCGTCTTATCAAGAAGA+TGG + chr2_2:46492463-46492482 Msa0253980:CDS 40.0%
TTAAGCAAAGGGAGAAGCTT+AGG - chr2_2:46492623-46492642 None:intergenic 40.0%
CAGCTTAAAAGTGAATCGGA+AGG - chr2_2:46492750-46492769 None:intergenic 40.0%
! CTCAAAGTGTTTGAAGCTAG+AGG + chr2_2:46492927-46492946 Msa0253980:CDS 40.0%
CCTCGTAAGAGAAATCTGTT+GGG - chr2_2:46493079-46493098 None:intergenic 40.0%
CCAACAGATTTCTCTTACGA+GGG + chr2_2:46493077-46493096 Msa0253980:CDS 40.0%
! TCCTTGTCCTACAGGTTTTA+AGG + chr2_2:46493372-46493391 Msa0253980:intron 40.0%
TACCATGCCTTAAAACCTGT+AGG - chr2_2:46493382-46493401 None:intergenic 40.0%
!! GTCGTGTTTTGAACATCTTC+AGG - chr2_2:46494226-46494245 None:intergenic 40.0%
TTGTTGAAGTCACAGTAGAG+TGG + chr2_2:46494525-46494544 Msa0253980:three_prime_UTR 40.0%
CTTTGAGCAATGCAAGCTTG+AGG + chr2_2:46492056-46492075 Msa0253980:intron 45.0%
ATCCTTGCTCGAGCAATCTT+TGG - chr2_2:46492150-46492169 None:intergenic 45.0%
AGAACCGCGTGCTTAAGTTA+TGG + chr2_2:46492230-46492249 Msa0253980:intron 45.0%
! TGTGTACCAGGTGCTTTTGT+AGG + chr2_2:46492323-46492342 Msa0253980:intron 45.0%
!! TGACTACCTACAAAAGCACC+TGG - chr2_2:46492332-46492351 None:intergenic 45.0%
! GGTGCTTTTGTAGGTAGTCA+TGG + chr2_2:46492332-46492351 Msa0253980:intron 45.0%
AGGTAGTCATGGATTCACCA+AGG + chr2_2:46492343-46492362 Msa0253980:exon 45.0%
GGTAGTCATGGATTCACCAA+GGG + chr2_2:46492344-46492363 Msa0253980:exon 45.0%
TCACCAAGGGAAACAACAGT+AGG + chr2_2:46492357-46492376 Msa0253980:CDS 45.0%
!! TCTCCTACTGTTGTTTCCCT+TGG - chr2_2:46492363-46492382 None:intergenic 45.0%
!! GCGTCGACTATGAACCTTAA+TGG - chr2_2:46493057-46493076 None:intergenic 45.0%
CCCAACAGATTTCTCTTACG+AGG + chr2_2:46493076-46493095 Msa0253980:CDS 45.0%
CCCTCGTAAGAGAAATCTGT+TGG - chr2_2:46493080-46493099 None:intergenic 45.0%
GCCTTAAAACCTGTAGGACA+AGG - chr2_2:46493376-46493395 None:intergenic 45.0%
!!! GTCCTACAGGTTTTAAGGCA+TGG + chr2_2:46493377-46493396 Msa0253980:intron 45.0%
TTCACCAATCTGCCAGTCTT+TGG + chr2_2:46493410-46493429 Msa0253980:CDS 45.0%
CTGCAACTAAATGAGGTCAC+TGG + chr2_2:46493446-46493465 Msa0253980:CDS 45.0%
AAGCTTGACAGAAAGCAGTG+AGG - chr2_2:46493985-46494004 None:intergenic 45.0%
GAACGAGCACGATCTTTGTT+TGG + chr2_2:46494035-46494054 Msa0253980:CDS 45.0%
! GGAGATGATGATGATATCGC+CGG + chr2_2:46494089-46494108 Msa0253980:CDS 45.0%
!!! TGATGATATCGCCGGCTTTT+TGG + chr2_2:46494097-46494116 Msa0253980:CDS 45.0%
GCGAGATTCTAGCCCTAATA+AGG + chr2_2:46494403-46494422 Msa0253980:three_prime_UTR 45.0%
TAGGATCTTGAACACACAGC+AGG + chr2_2:46494480-46494499 Msa0253980:three_prime_UTR 45.0%
AGGATCTTGAACACACAGCA+GGG + chr2_2:46494481-46494500 Msa0253980:three_prime_UTR 45.0%
GGAAACCAACTTCTTCGTAG+AGG - chr2_2:46494566-46494585 None:intergenic 45.0%
ATTCCAATCGTAGACGCGGT+TGG + chr2_2:46492438-46492457 Msa0253980:CDS 50.0%
! TTGAAGCTAGAGGGTGCGAA+TGG + chr2_2:46492937-46492956 Msa0253980:CDS 50.0%
CCTTCCAAAGACTGGCAGAT+TGG - chr2_2:46493417-46493436 None:intergenic 50.0%
CCAATCTGCCAGTCTTTGGA+AGG + chr2_2:46493414-46493433 Msa0253980:CDS 50.0%
GTTGGCAGATGCAGCAATCA+TGG + chr2_2:46494068-46494087 Msa0253980:CDS 50.0%
GCATATCGCAGCCAAAAAGC+CGG - chr2_2:46494111-46494130 None:intergenic 50.0%
AGTAGAGTGGCATTGCGACA+TGG + chr2_2:46494538-46494557 Msa0253980:three_prime_UTR 50.0%
TGGCACCTCTACGAAGAAGT+TGG + chr2_2:46494558-46494577 Msa0253980:three_prime_UTR 50.0%
TGCTCGAGCAATCTTTGGCC+AGG - chr2_2:46492145-46492164 None:intergenic 55.0%
GGCCAAAGATTGCTCGAGCA+AGG + chr2_2:46492145-46492164 Msa0253980:intron 55.0%
GTGCCAACCGCGTCTACGAT+TGG - chr2_2:46492444-46492463 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 46491454 46494756 46491454 ID=Msa0253980;Name=Msa0253980
chr2_2 mRNA 46491454 46494756 46491454 ID=Msa0253980-mRNA-1;Parent=Msa0253980;Name=Msa0253980-mRNA-1;_AED=0.09;_eAED=0.09;_QI=171|1|1|1|0.66|0.5|4|529|451
chr2_2 exon 46491454 46491606 46491454 ID=Msa0253980-mRNA-1:exon:14240;Parent=Msa0253980-mRNA-1
chr2_2 exon 46492333 46493271 46492333 ID=Msa0253980-mRNA-1:exon:14241;Parent=Msa0253980-mRNA-1
chr2_2 exon 46493386 46493529 46493386 ID=Msa0253980-mRNA-1:exon:14242;Parent=Msa0253980-mRNA-1
chr2_2 exon 46493937 46494756 46493937 ID=Msa0253980-mRNA-1:exon:14243;Parent=Msa0253980-mRNA-1
chr2_2 five_prime_UTR 46491454 46491606 46491454 ID=Msa0253980-mRNA-1:five_prime_utr;Parent=Msa0253980-mRNA-1
chr2_2 five_prime_UTR 46492333 46492350 46492333 ID=Msa0253980-mRNA-1:five_prime_utr;Parent=Msa0253980-mRNA-1
chr2_2 CDS 46492351 46493271 46492351 ID=Msa0253980-mRNA-1:cds;Parent=Msa0253980-mRNA-1
chr2_2 CDS 46493386 46493529 46493386 ID=Msa0253980-mRNA-1:cds;Parent=Msa0253980-mRNA-1
chr2_2 CDS 46493937 46494227 46493937 ID=Msa0253980-mRNA-1:cds;Parent=Msa0253980-mRNA-1
chr2_2 three_prime_UTR 46494228 46494756 46494228 ID=Msa0253980-mRNA-1:three_prime_utr;Parent=Msa0253980-mRNA-1
Gene Sequence

>Msa0253980

ATGGATTCACCAAGGGAAACAACAGTAGGAGAAAGAGATTTGATTAGCACATTACATGAAAGCATTCTTAGTCAGGTCCTGTCATTCATTCCAATCGTAGACGCGGTTGGCACTAGCGTCTTATCAAGAAGATGGATTGATGTTTGGAAATGCATAACAAATCTAGATTTTGATGATAGTTTGCTCGGTTCTAAGAAGAAAAAGATGCAAAAGGAACAATTTGTGAAATTTGTTGAAAAAGTGCTTCTTCAATTCACTAACTCAAGCATCCTAAGCTTCTCCCTTTGCTTAACTAGTCATGAATATGATGCATCTAAGTTAAGTGAATGGATTTGCTTTATCTTAGAAAGGAGAGTTCAAAAGCTTCGTGTTCAATATGCCGATAAAGTTTTCCTTCCTTCCGATTCACTTTTAAGCTGCAATTCTTTAGTCGAATTGACGCTTCAAATGAGATGTACTCTTAGTCTTCCCGTATCTGTTTGTCTCCAAAACCTTCAAAAACTTAGCATTTCTGGGGTTAAATTAGTGAGTGATTCTTCCACTTGTTCAAAAGATATAACTCTCAATTTCCCGATTCTCAAAGTGTTTGAAGCTAGAGGGTGCGAATGGCCAACAACACAGAACATTAGTTTACAAGTACCTTTACTTGAGACGTTTTCGATAGCAATATGGAACCATCATTCAAATGAATCATGTAAATATGCCATTAAGGTTCATAGTCGACGCCCAACAGATTTCTCTTACGAGGGTGATCTTGAACAAGACATCGTTCTATGTGATTCGTCCTCAATTAGTAATGCTTCTGTTGTGATTGTTGTTGATGAAGATAAAAAGGATAGAATGGAAAAACTTGAATTTCAAGCACGTAGTCTTCTCAAACAAATCGATAACGTGGAACAGCTAAAGTTATTGTTTTACAAGGTTTTAAGGCATGGTAAAGATATTTTCACCAATCTGCCAGTCTTTGGAAGGTTAACTTATCTGCAACTAAATGAGGTCACTGGTGAAGCTTTGTTGCAATTACTCCACAATTCCCCTATTCTTAACACTCTTGTTTTACTTAATGGAGTAGCTGATTTAGACAAAGATGTCTTTACTTCTGCAACGGTGCCTCACTGCTTTCTGTCAAGCTTCAAAGTATTTCAGTTTAAAGGATTTAATGCGAACGAGCACGATCTTTGTTTGGTAAAATTCGTGTTGGCAGATGCAGCAATCATGGAGATGATGATGATATCGCCGGCTTTTTGGCTGCGATATGCAAATGTTGATTTGAAGAAAGTTAAGGAGCAGATACTCTCATTACCAAAGTGTTCTAACAACTGCAAGATAGAATTTTCTGATATCAGTAGATCCTGA
Protein sequence

>Msa0253980

MDSPRETTVGERDLISTLHESILSQVLSFIPIVDAVGTSVLSRRWIDVWKCITNLDFDDSLLGSKKKKMQKEQFVKFVEKVLLQFTNSSILSFSLCLTSHEYDASKLSEWICFILERRVQKLRVQYADKVFLPSDSLLSCNSLVELTLQMRCTLSLPVSVCLQNLQKLSISGVKLVSDSSTCSKDITLNFPILKVFEARGCEWPTTQNISLQVPLLETFSIAIWNHHSNESCKYAIKVHSRRPTDFSYEGDLEQDIVLCDSSSISNASVVIVVDEDKKDRMEKLEFQARSLLKQIDNVEQLKLLFYKVLRHGKDIFTNLPVFGRLTYLQLNEVTGEALLQLLHNSPILNTLVLLNGVADLDKDVFTSATVPHCFLSSFKVFQFKGFNANEHDLCLVKFVLADAAIMEMMMISPAFWLRYANVDLKKVKEQILSLPKCSNNCKIEFSDISRS*