Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300420 | XP_003609194.1 | 97.586 | 290 | 7 | 0 | 1 | 290 | 1 | 290 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300420 | sp|Q0WP96|PGR_ARATH | 65.614 | 285 | 98 | 0 | 6 | 290 | 4 | 288 | 3.12e-130 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300420 | G7JU49 | 97.586 | 290 | 7 | 0 | 1 | 290 | 1 | 290 | 0.0 | 571 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0657710 | Msa1300420 | 0.802699 | 4.957214e-49 | -8.615850e-47 |
| Msa0722890 | Msa1300420 | 0.802719 | 4.908599e-49 | -8.615850e-47 |
| Msa0723090 | Msa1300420 | 0.818871 | 1.563258e-52 | -8.615850e-47 |
| Msa0134780 | Msa1300420 | 0.839284 | 1.737138e-57 | -8.615850e-47 |
| Msa0179700 | Msa1300420 | 0.801308 | 9.573161e-49 | -8.615850e-47 |
| Msa1246830 | Msa1300420 | 0.804020 | 2.639823e-49 | -8.615850e-47 |
| Msa1261160 | Msa1300420 | 0.859662 | 3.541621e-63 | -8.615850e-47 |
| Msa1283070 | Msa1300420 | 0.801905 | 7.221967e-49 | -8.615850e-47 |
| Msa1292660 | Msa1300420 | 0.809186 | 2.142938e-50 | -8.615850e-47 |
| Msa1300420 | Msa1306820 | 0.807803 | 4.229179e-50 | -8.615850e-47 |
| Msa1300420 | Msa1381030 | 0.827971 | 1.165104e-54 | -8.615850e-47 |
| Msa1300420 | Msa1407810 | 0.809817 | 1.568676e-50 | -8.615850e-47 |
| Msa1300420 | Msa1417370 | 0.825751 | 3.952450e-54 | -8.615850e-47 |
| Msa1300420 | Msa1433360 | 0.824907 | 6.257521e-54 | -8.615850e-47 |
| Msa1300420 | Msa1437780 | 0.811495 | 6.805636e-51 | -8.615850e-47 |
| Msa1300420 | Msa1440430 | 0.827873 | 1.230287e-54 | -8.615850e-47 |
| Msa0386540 | Msa1300420 | 0.813461 | 2.530006e-51 | -8.615850e-47 |
| Msa0457570 | Msa1300420 | 0.840441 | 8.680588e-58 | -8.615850e-47 |
| Msa1042300 | Msa1300420 | 0.801883 | 7.295521e-49 | -8.615850e-47 |
| Msa1068960 | Msa1300420 | 0.802527 | 5.378811e-49 | -8.615850e-47 |
| Msa0262750 | Msa1300420 | 0.804881 | 1.745812e-49 | -8.615850e-47 |
| Msa0318490 | Msa1300420 | 0.813262 | 2.798502e-51 | -8.615850e-47 |
| Msa1179290 | Msa1300420 | 0.806958 | 6.389120e-50 | -8.615850e-47 |
| Msa1214310 | Msa1300420 | 0.913498 | 5.739823e-84 | -8.615850e-47 |
| Msa0560060 | Msa1300420 | 0.804506 | 2.091002e-49 | -8.615850e-47 |
| Msa0567330 | Msa1300420 | 0.805353 | 1.390478e-49 | -8.615850e-47 |
| Msa0567570 | Msa1300420 | 0.808685 | 2.743305e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300420 | MtrunA17_Chr4g0062841 | 97.586 | 290 | 7 | 0 | 1 | 290 | 1 | 290 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300420 | AT5G19930.1 | 65.614 | 285 | 98 | 0 | 6 | 290 | 4 | 288 | 3.17e-131 | 374 |
| Msa1300420 | AT5G19930.2 | 65.614 | 285 | 98 | 0 | 6 | 290 | 4 | 288 | 3.17e-131 | 374 |
Find 100 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTCTGATTGTAGCTTTA+TGG | 0.071257 | 8_3:+61963167 | Msa1300420:CDS |
| ATCATTTCTGAAACCGAATT+TGG | 0.106749 | 8_3:+61961955 | Msa1300420:five_prime_UTR |
| AAAGAGGAGAATAATAATTT+TGG | 0.191848 | 8_3:+61961763 | Msa1300420:five_prime_UTR |
| TTTATATTTGTATCTTAAAA+AGG | 0.218807 | 8_3:-61964942 | None:intergenic |
| AAAATTATTATTCTCCTCTT+TGG | 0.231956 | 8_3:-61961761 | None:intergenic |
| TGTTCTGATTGTAGCTTTAT+GGG | 0.234865 | 8_3:+61963168 | Msa1300420:CDS |
| TCTTATTCTCGTTATAATAT+TGG | 0.236545 | 8_3:-61961823 | None:intergenic |
| GCTCTCATTGGTGGTGTTAT+TGG | 0.255394 | 8_3:+61963247 | Msa1300420:CDS |
| TTAATTCTTGTATCCATATC+TGG | 0.256445 | 8_3:+61964839 | Msa1300420:three_prime_UTR |
| CGTGTTCCTCGTTGCCTATT+CGG | 0.276192 | 8_3:+61961788 | Msa1300420:five_prime_UTR |
| TGTCCACCTTGTTTGAATTC+AGG | 0.279090 | 8_3:-61962329 | None:intergenic |
| AAAGGAGGAAGCCAAATAAA+AGG | 0.279137 | 8_3:+61964795 | Msa1300420:three_prime_UTR |
| AGCACTTCTGGTGCACTTGC+TGG | 0.299865 | 8_3:+61962084 | Msa1300420:CDS |
| GTGAGCTCTGAATGCGATTA+AGG | 0.301312 | 8_3:-61962046 | None:intergenic |
| CTTTCAAAGACTTGCTTGAT+AGG | 0.309268 | 8_3:-61964776 | None:intergenic |
| TTGAGTGAGTTTCCCAAATT+CGG | 0.341371 | 8_3:-61961968 | None:intergenic |
| GAGAATTCAAAATTTGTAAT+CGG | 0.352971 | 8_3:+61964733 | Msa1300420:three_prime_UTR |
| CCCTCTATGTTGTAGGTTGT+TGG | 0.355656 | 8_3:+61964547 | Msa1300420:intron |
| TCCTCGTTGCCTATTCGGTT+TGG | 0.372588 | 8_3:+61961793 | Msa1300420:five_prime_UTR |
| CGGATCCACTGAGAAATAGA+TGG | 0.376312 | 8_3:-61961997 | None:intergenic |
| CTCCATTGCAGCAGCAATAA+TGG | 0.378209 | 8_3:-61963270 | None:intergenic |
| GGCGCAACATTGCAATTTAG+TGG | 0.386948 | 8_3:+61964412 | Msa1300420:CDS |
| TTAATAACATGATGTGAGTT+TGG | 0.388697 | 8_3:-61961859 | None:intergenic |
| TCATTTCTGAAACCGAATTT+GGG | 0.394912 | 8_3:+61961956 | Msa1300420:five_prime_UTR |
| GGTTGCATTCCAAACCGAAT+AGG | 0.409105 | 8_3:-61961802 | None:intergenic |
| TGACGATGCATGGCATTGTT+AGG | 0.409749 | 8_3:+61964977 | Msa1300420:three_prime_UTR |
| AACAGAGGCAATGCCACTAT+TGG | 0.410928 | 8_3:-61963149 | None:intergenic |
| AAGTATCATTGACTCTCTAT+TGG | 0.411402 | 8_3:+61964390 | Msa1300420:CDS |
| AACAAGGTGGACAACGAAAC+TGG | 0.413804 | 8_3:+61962339 | Msa1300420:CDS |
| TAGAATTCTCAAGCAACTAT+TGG | 0.422184 | 8_3:+61964333 | Msa1300420:CDS |
| AAAGAGGTTATTCACCTTGA+AGG | 0.422918 | 8_3:-61963350 | None:intergenic |
| TAGAGCAGAATAATAAAGTA+TGG | 0.431621 | 8_3:+61961724 | None:intergenic |
| TGTAATCGGATGATAGAATA+GGG | 0.439571 | 8_3:+61964747 | Msa1300420:three_prime_UTR |
| GACACATGGTCTTCTGAGCT+TGG | 0.442992 | 8_3:+61963292 | Msa1300420:CDS |
| TTGTAATCGGATGATAGAAT+AGG | 0.443653 | 8_3:+61964746 | Msa1300420:three_prime_UTR |
| TTGTAGGTTGTTGGAAATCC+AGG | 0.453453 | 8_3:+61964556 | Msa1300420:intron |
| GATAGAACTAGAACCAGATA+TGG | 0.455391 | 8_3:-61964852 | None:intergenic |
| CCACTCCACCTCGTGGTAGT+TGG | 0.455444 | 8_3:+61961892 | Msa1300420:five_prime_UTR |
| AGTATCATTGACTCTCTATT+GGG | 0.459444 | 8_3:+61964391 | Msa1300420:CDS |
| GCCAAATAAAAGGGCAGCAT+AGG | 0.463670 | 8_3:+61964805 | Msa1300420:three_prime_UTR |
| ATTTGGGAAACTCACTCAAA+TGG | 0.468503 | 8_3:+61961972 | Msa1300420:exon |
| TTCTCAGTGGATCCGACCAT+TGG | 0.469540 | 8_3:+61962005 | Msa1300420:CDS |
| GCAGCTGGTGGAAGTGTCAT+TGG | 0.473800 | 8_3:+61964262 | Msa1300420:CDS |
| TCGTCTAATCACAACCTTCA+AGG | 0.476556 | 8_3:+61963336 | Msa1300420:CDS |
| GCTCTAATTACCGCTCTCAT+TGG | 0.488116 | 8_3:+61963235 | Msa1300420:CDS |
| GGACTTCTAGCAGCTGCAGC+TGG | 0.498554 | 8_3:+61964247 | Msa1300420:CDS |
| CCATTGGTTGCTGTCACTGT+TGG | 0.504140 | 8_3:+61962021 | Msa1300420:CDS |
| TACAAATATAAAACATGAAG+AGG | 0.505675 | 8_3:+61964953 | Msa1300420:three_prime_UTR |
| TAACATGATGTGAGTTTGGT+TGG | 0.516511 | 8_3:-61961855 | None:intergenic |
| ATACCCCTCACTACCGTGGC+AGG | 0.517394 | 8_3:+61964358 | Msa1300420:CDS |
| ATACAAGTTCTGGCCAATAG+TGG | 0.522110 | 8_3:+61963136 | Msa1300420:CDS |
| CCTGTGAGGAAGGGTACAAA+TGG | 0.528132 | 8_3:+61964208 | Msa1300420:CDS |
| CTAATTACCGCTCTCATTGG+TGG | 0.531975 | 8_3:+61963238 | Msa1300420:CDS |
| GGCCATTATTGCTGCTGCAA+TGG | 0.538240 | 8_3:+61963268 | Msa1300420:CDS |
| CAAAGATGTCACTCTAATGT+TGG | 0.539550 | 8_3:-61964905 | None:intergenic |
| CCAAATAAAAGGGCAGCATA+GGG | 0.544842 | 8_3:+61964806 | Msa1300420:three_prime_UTR |
| CCATTTGTACCCTTCCTCAC+AGG | 0.544901 | 8_3:-61964208 | None:intergenic |
| AAGGAGGAAGCCAAATAAAA+GGG | 0.546018 | 8_3:+61964796 | Msa1300420:three_prime_UTR |
| TCAAAGACTTGCTTGATAGG+AGG | 0.552779 | 8_3:-61964773 | None:intergenic |
| CTTCTAGCAGCTGCAGCTGG+TGG | 0.554176 | 8_3:+61964250 | Msa1300420:CDS |
| ATGAAGAGGATGACGATGCA+TGG | 0.569749 | 8_3:+61964967 | Msa1300420:three_prime_UTR |
| TACCACGAGGTGGAGTGGAA+TGG | 0.569946 | 8_3:-61961887 | None:intergenic |
| GCTTTATGGGTACTAACAGA+AGG | 0.570914 | 8_3:+61963181 | Msa1300420:CDS |
| ATAGTCCTGCCACGGTAGTG+AGG | 0.574585 | 8_3:-61964363 | None:intergenic |
| CTATCAAGCAAGTCTTTGAA+AGG | 0.585227 | 8_3:+61964777 | Msa1300420:three_prime_UTR |
| ACTACCGTGGCAGGACTATG+TGG | 0.586247 | 8_3:+61964367 | Msa1300420:CDS |
| ATGGGTACTAACAGAAGGGA+AGG | 0.594387 | 8_3:+61963186 | Msa1300420:CDS |
| TAGTCCTGCCACGGTAGTGA+GGG | 0.595711 | 8_3:-61964362 | None:intergenic |
| TAATCGCATTCAGAGCTCAC+AGG | 0.596274 | 8_3:+61962049 | Msa1300420:CDS |
| CCAACTACCACGAGGTGGAG+TGG | 0.600830 | 8_3:-61961892 | None:intergenic |
| TTGGAGTTCTCAGTAATGAT+CGG | 0.602360 | 8_3:+61963311 | Msa1300420:CDS |
| ATTCTGCTCTATTCGCCAGA+AGG | 0.615062 | 8_3:+61964435 | Msa1300420:CDS |
| GTGCATGAACTCTAAAGACT+CGG | 0.615281 | 8_3:+61963213 | Msa1300420:CDS |
| TCAAGCAAGTCTTTGAAAGG+AGG | 0.616780 | 8_3:+61964780 | Msa1300420:three_prime_UTR |
| CAAGTGCACCAGAAGTGCTG+AGG | 0.620284 | 8_3:-61962080 | None:intergenic |
| GGATCCACTGAGAAATAGAT+GGG | 0.623325 | 8_3:-61961996 | None:intergenic |
| AAGTGCACCAGAAGTGCTGA+GGG | 0.630378 | 8_3:-61962079 | None:intergenic |
| CTTTATGGGTACTAACAGAA+GGG | 0.631113 | 8_3:+61963182 | Msa1300420:CDS |
| AGCGACTGAAGTTAAAATTG+TGG | 0.631604 | 8_3:-61964653 | None:intergenic |
| ATTGATCCTGAATTCAAACA+AGG | 0.648969 | 8_3:+61962323 | Msa1300420:CDS |
| CAGTGACAGCAACCAATGGT+CGG | 0.652095 | 8_3:-61962017 | None:intergenic |
| CCAACAGTGACAGCAACCAA+TGG | 0.662526 | 8_3:-61962021 | None:intergenic |
| TCTACTTTCGAAATCTACAC+AGG | 0.665934 | 8_3:-61964877 | None:intergenic |
| AGTCCTGCCACGGTAGTGAG+GGG | 0.669040 | 8_3:-61964361 | None:intergenic |
| TTCCATTCCACTCCACCTCG+TGG | 0.671355 | 8_3:+61961885 | Msa1300420:five_prime_UTR |
| GATACAAGAATTAAATCACA+AGG | 0.675604 | 8_3:-61964830 | None:intergenic |
| ACTTCCACATAGTCCTGCCA+CGG | 0.681568 | 8_3:-61964371 | None:intergenic |
| AACAACCAACTACCACGAGG+TGG | 0.685328 | 8_3:-61961897 | None:intergenic |
| GATCCTGAATTCAAACAAGG+TGG | 0.686429 | 8_3:+61962326 | Msa1300420:CDS |
| AATAACACCACCAATGAGAG+CGG | 0.688307 | 8_3:-61963245 | None:intergenic |
| TAAAGCTACAATCAGAACAG+AGG | 0.688389 | 8_3:-61963164 | None:intergenic |
| AAAAGGGACAAGATACGAAG+CGG | 0.694625 | 8_3:+61962297 | Msa1300420:CDS |
| TCGAACAAACAAGACCAAAG+AGG | 0.695962 | 8_3:+61961747 | Msa1300420:five_prime_UTR |
| GGTCATACCCCTCACTACCG+TGG | 0.698974 | 8_3:+61964354 | Msa1300420:CDS |
| GTGAGGAAGGGTACAAATGG+TGG | 0.703389 | 8_3:+61964211 | Msa1300420:CDS |
| ATACAAGAATTAAATCACAA+GGG | 0.705522 | 8_3:-61964829 | None:intergenic |
| TGGACCCATCTATTTCTCAG+TGG | 0.712343 | 8_3:+61961992 | Msa1300420:CDS |
| GCTGCTGCAATGGAGACACA+TGG | 0.733987 | 8_3:+61963278 | Msa1300420:CDS |
| TCCAAACCGAATAGGCAACG+AGG | 0.761278 | 8_3:-61961794 | None:intergenic |
| AAGAACAACCAACTACCACG+AGG | 0.800597 | 8_3:-61961900 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATAATCAATATTAC+AGG | + | chr8_3:61962768-61962787 | Msa1300420:intron | 10.0% |
| !! | TTTATATTTGTATCTTAAAA+AGG | - | chr8_3:61964945-61964964 | None:intergenic | 10.0% |
| !!! | AAATCTTTTTTGTTGTTTAA+TGG | + | chr8_3:61962194-61962213 | Msa1300420:intron | 15.0% |
| !!! | TTCGAAATATAATTCTTTTT+TGG | + | chr8_3:61963656-61963675 | Msa1300420:intron | 15.0% |
| !! | AAAATTATTATTCTCCTCTT+TGG | - | chr8_3:61961764-61961783 | None:intergenic | 20.0% |
| !!! | AAAGAGGAGAATAATAATTT+TGG | + | chr8_3:61961763-61961782 | Msa1300420:five_prime_UTR | 20.0% |
| !! | TCTTATTCTCGTTATAATAT+TGG | - | chr8_3:61961826-61961845 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAGAGCAAAAAA+GGG | - | chr8_3:61962392-61962411 | None:intergenic | 20.0% |
| !! | TAAAAGAAAAAGAGCAAAAA+AGG | - | chr8_3:61962393-61962412 | None:intergenic | 20.0% |
| !!! | GAGTTTTTTTTACTATAAGA+TGG | + | chr8_3:61962579-61962598 | Msa1300420:intron | 20.0% |
| !!! | TTTTTTGAAAATTCAGTATC+CGG | - | chr8_3:61962697-61962716 | None:intergenic | 20.0% |
| !! | AACGCTAAAAATTCTAATTA+GGG | + | chr8_3:61962870-61962889 | Msa1300420:intron | 20.0% |
| !! | TACATAAAAAAGCTAAAACT+TGG | + | chr8_3:61962947-61962966 | Msa1300420:intron | 20.0% |
| !!! | TAATTGCAACAATTTTCTTT+TGG | + | chr8_3:61963000-61963019 | Msa1300420:intron | 20.0% |
| !! | CTAATTAGTAAATGCAAATT+AGG | - | chr8_3:61963415-61963434 | None:intergenic | 20.0% |
| !!! | CTAATTTGCATTTACTAATT+AGG | + | chr8_3:61963413-61963432 | Msa1300420:intron | 20.0% |
| !! | AAAACAAAATTGAGAATTTG+TGG | - | chr8_3:61963836-61963855 | None:intergenic | 20.0% |
| !!! | TATTAGTTTTTCACATAAAG+TGG | + | chr8_3:61963960-61963979 | Msa1300420:intron | 20.0% |
| !! | TACATTTGAACAAAATTCAA+TGG | + | chr8_3:61964497-61964516 | Msa1300420:intron | 20.0% |
| !! | GAGAATTCAAAATTTGTAAT+CGG | + | chr8_3:61964733-61964752 | Msa1300420:three_prime_UTR | 20.0% |
| !! | ATACAAGAATTAAATCACAA+GGG | - | chr8_3:61964832-61964851 | None:intergenic | 20.0% |
| !! | TACAAATATAAAACATGAAG+AGG | + | chr8_3:61964953-61964972 | Msa1300420:three_prime_UTR | 20.0% |
| ! | TTAATAACATGATGTGAGTT+TGG | - | chr8_3:61961862-61961881 | None:intergenic | 25.0% |
| !! | TCATTCAATCATTTTCAACA+AGG | + | chr8_3:61962225-61962244 | Msa1300420:intron | 25.0% |
| ! | AAAAAAGGGAACATAGAAAA+GGG | - | chr8_3:61962378-61962397 | None:intergenic | 25.0% |
| ! | TAGAATTGATTAAACTTGTG+CGG | + | chr8_3:61962501-61962520 | Msa1300420:intron | 25.0% |
| !! | TATAACTTGAGGTTAGATTT+TGG | + | chr8_3:61962557-61962576 | Msa1300420:intron | 25.0% |
| ! | TTGGATACATTTATGTAAGT+GGG | - | chr8_3:61962616-61962635 | None:intergenic | 25.0% |
| ! | ACATAAATGTATCCAACAAT+TGG | + | chr8_3:61962620-61962639 | Msa1300420:intron | 25.0% |
| !! | ATAAAACTAAGTTGAACGAA+TGG | - | chr8_3:61962753-61962772 | None:intergenic | 25.0% |
| ! | GAACGCTAAAAATTCTAATT+AGG | + | chr8_3:61962869-61962888 | Msa1300420:intron | 25.0% |
| !!! | ATGGTTTTTTTGTCACATTA+TGG | + | chr8_3:61963062-61963081 | Msa1300420:intron | 25.0% |
| ! | AAATGCAAATTAGGAATAGA+AGG | - | chr8_3:61963406-61963425 | None:intergenic | 25.0% |
| !!! | TTGATGTTCATTAATTTGCT+AGG | + | chr8_3:61963481-61963500 | Msa1300420:intron | 25.0% |
| ! | AATATTAATCAAAACATCCC+TGG | + | chr8_3:61963516-61963535 | Msa1300420:intron | 25.0% |
| !! | TCACAGCTTAAATATGTTTT+TGG | + | chr8_3:61963631-61963650 | Msa1300420:intron | 25.0% |
| ! | ATTTGTGGATCCTTTATTAA+GGG | - | chr8_3:61963821-61963840 | None:intergenic | 25.0% |
| ! | AATTTGTGGATCCTTTATTA+AGG | - | chr8_3:61963822-61963841 | None:intergenic | 25.0% |
| ! | AATTAAAAGAACAGAATGTG+AGG | - | chr8_3:61963913-61963932 | None:intergenic | 25.0% |
| ! | CTTATAAGTTATAACATCTG+TGG | + | chr8_3:61964078-61964097 | Msa1300420:intron | 25.0% |
| ! | GATACAAGAATTAAATCACA+AGG | - | chr8_3:61964833-61964852 | None:intergenic | 25.0% |
| ! | TTAATTCTTGTATCCATATC+TGG | + | chr8_3:61964839-61964858 | Msa1300420:three_prime_UTR | 25.0% |
| !! | ATCATTTCTGAAACCGAATT+TGG | + | chr8_3:61961955-61961974 | Msa1300420:five_prime_UTR | 30.0% |
| !! | TCATTTCTGAAACCGAATTT+GGG | + | chr8_3:61961956-61961975 | Msa1300420:five_prime_UTR | 30.0% |
| ! | TTCACGTTTTTGTTGGATTT+AGG | + | chr8_3:61962124-61962143 | Msa1300420:CDS | 30.0% |
| ! | ATCATTTTCAACAAGGTTTG+CGG | + | chr8_3:61962232-61962251 | Msa1300420:intron | 30.0% |
| ATTGATCCTGAATTCAAACA+AGG | + | chr8_3:61962323-61962342 | Msa1300420:CDS | 30.0% | |
| CAAAAAAGGGAACATAGAAA+AGG | - | chr8_3:61962379-61962398 | None:intergenic | 30.0% | |
| ATGTAGTATAACTCAAGACA+AGG | - | chr8_3:61962421-61962440 | None:intergenic | 30.0% | |
| CTACAATGGAATATAACTTG+AGG | + | chr8_3:61962546-61962565 | Msa1300420:intron | 30.0% | |
| GTTGGATACATTTATGTAAG+TGG | - | chr8_3:61962617-61962636 | None:intergenic | 30.0% | |
| !!! | TTTTTTGTCACATTATGGTG+AGG | + | chr8_3:61963067-61963086 | Msa1300420:intron | 30.0% |
| GGGAAATTTATACCAAATTC+AGG | - | chr8_3:61963100-61963119 | None:intergenic | 30.0% | |
| !!! | ATTTCCCTACTGTTTTTTTC+AGG | + | chr8_3:61963113-61963132 | Msa1300420:intron | 30.0% |
| GTATCCTGAAAAAAACAGTA+GGG | - | chr8_3:61963120-61963139 | None:intergenic | 30.0% | |
| TGTATCCTGAAAAAAACAGT+AGG | - | chr8_3:61963121-61963140 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAGGATACAAGTTC+TGG | + | chr8_3:61963126-61963145 | Msa1300420:intron | 30.0% |
| !! | TGTTCTGATTGTAGCTTTAT+GGG | + | chr8_3:61963168-61963187 | Msa1300420:CDS | 30.0% |
| ! | ATGTTGTTGCTTAAACAAAG+AGG | - | chr8_3:61963369-61963388 | None:intergenic | 30.0% |
| ! | TTTCGTAATTTGTGATTGTG+TGG | + | chr8_3:61963685-61963704 | Msa1300420:intron | 30.0% |
| ! | TTCGTAATTTGTGATTGTGT+GGG | + | chr8_3:61963686-61963705 | Msa1300420:intron | 30.0% |
| !! | GTTTTTAAGCTTAAACTGCT+CGG | + | chr8_3:61963851-61963870 | Msa1300420:intron | 30.0% |
| !! | TTTTTAAGCTTAAACTGCTC+GGG | + | chr8_3:61963852-61963871 | Msa1300420:intron | 30.0% |
| TATAACTTATAAGCCACTTG+TGG | - | chr8_3:61964071-61964090 | None:intergenic | 30.0% | |
| !!! | TTCTAGAACTTTTGACAATC+AGG | + | chr8_3:61964299-61964318 | Msa1300420:CDS | 30.0% |
| TAGAATTCTCAAGCAACTAT+TGG | + | chr8_3:61964333-61964352 | Msa1300420:CDS | 30.0% | |
| !! | AAGTATCATTGACTCTCTAT+TGG | + | chr8_3:61964390-61964409 | Msa1300420:CDS | 30.0% |
| !! | AGTATCATTGACTCTCTATT+GGG | + | chr8_3:61964391-61964410 | Msa1300420:CDS | 30.0% |
| GTGTATCAAAATTTACCTTC+TGG | - | chr8_3:61964453-61964472 | None:intergenic | 30.0% | |
| ! | GATACACCTTTTTCTCATAT+TGG | + | chr8_3:61964466-61964485 | Msa1300420:intron | 30.0% |
| GTAATGCCAATATGAGAAAA+AGG | - | chr8_3:61964475-61964494 | None:intergenic | 30.0% | |
| ! | GAGACCTGAAATCTTTTTAA+CGG | - | chr8_3:61964587-61964606 | None:intergenic | 30.0% |
| TTGTAATCGGATGATAGAAT+AGG | + | chr8_3:61964746-61964765 | Msa1300420:three_prime_UTR | 30.0% | |
| TGTAATCGGATGATAGAATA+GGG | + | chr8_3:61964747-61964766 | Msa1300420:three_prime_UTR | 30.0% | |
| TAACATGATGTGAGTTTGGT+TGG | - | chr8_3:61961858-61961877 | None:intergenic | 35.0% | |
| TTGAGTGAGTTTCCCAAATT+CGG | - | chr8_3:61961971-61961990 | None:intergenic | 35.0% | |
| ATTTGGGAAACTCACTCAAA+TGG | + | chr8_3:61961972-61961991 | Msa1300420:exon | 35.0% | |
| ! | ATGTCTCTTCACGTTTTTGT+TGG | + | chr8_3:61962117-61962136 | Msa1300420:CDS | 35.0% |
| ATTGATTAAACTTGTGCGGA+TGG | + | chr8_3:61962505-61962524 | Msa1300420:intron | 35.0% | |
| !! | ATACATCTCCACTTTTGCAT+AGG | + | chr8_3:61962847-61962866 | Msa1300420:intron | 35.0% |
| ! | TAATTAGGGTACTCTCTACA+GGG | + | chr8_3:61962884-61962903 | Msa1300420:intron | 35.0% |
| !! | AAGCCACATTTTAGTACTTG+TGG | + | chr8_3:61962918-61962937 | Msa1300420:intron | 35.0% |
| !! | AGCCACATTTTAGTACTTGT+GGG | + | chr8_3:61962919-61962938 | Msa1300420:intron | 35.0% |
| ATCCCACAAGTACTAAAATG+TGG | - | chr8_3:61962924-61962943 | None:intergenic | 35.0% | |
| !! | TTTGGTGTTCAGTTTGAGTT+TGG | + | chr8_3:61963018-61963037 | Msa1300420:intron | 35.0% |
| TAAAGCTACAATCAGAACAG+AGG | - | chr8_3:61963167-61963186 | None:intergenic | 35.0% | |
| ! | CTGTTCTGATTGTAGCTTTA+TGG | + | chr8_3:61963167-61963186 | Msa1300420:CDS | 35.0% |
| CTTTATGGGTACTAACAGAA+GGG | + | chr8_3:61963182-61963201 | Msa1300420:CDS | 35.0% | |
| TTGGAGTTCTCAGTAATGAT+CGG | + | chr8_3:61963311-61963330 | Msa1300420:CDS | 35.0% | |
| AAAGAGGTTATTCACCTTGA+AGG | - | chr8_3:61963353-61963372 | None:intergenic | 35.0% | |
| CACATTAGTTGAATGTTCCA+GGG | - | chr8_3:61963536-61963555 | None:intergenic | 35.0% | |
| ACACATTAGTTGAATGTTCC+AGG | - | chr8_3:61963537-61963556 | None:intergenic | 35.0% | |
| TTCTAAACTGCGAGTAATCT+TGG | + | chr8_3:61963567-61963586 | Msa1300420:intron | 35.0% | |
| TACATTGTCATGGAATGGAA+GGG | - | chr8_3:61963782-61963801 | None:intergenic | 35.0% | |
| TTACATTGTCATGGAATGGA+AGG | - | chr8_3:61963783-61963802 | None:intergenic | 35.0% | |
| GTTGTTACATTGTCATGGAA+TGG | - | chr8_3:61963787-61963806 | None:intergenic | 35.0% | |
| TTTATTAAGGGTTCGGATCA+GGG | - | chr8_3:61963809-61963828 | None:intergenic | 35.0% | |
| TGGATCCTTTATTAAGGGTT+CGG | - | chr8_3:61963816-61963835 | None:intergenic | 35.0% | |
| ! | TTTTAAGCTTAAACTGCTCG+GGG | + | chr8_3:61963853-61963872 | Msa1300420:intron | 35.0% |
| GAATGTGAGGAATCATTTGA+GGG | - | chr8_3:61963900-61963919 | None:intergenic | 35.0% | |
| AGAATGTGAGGAATCATTTG+AGG | - | chr8_3:61963901-61963920 | None:intergenic | 35.0% | |
| ! | TGATATTTTATCAGCCTGTG+AGG | + | chr8_3:61964194-61964213 | Msa1300420:intron | 35.0% |
| ! | AACTTTTGACAATCAGGTGT+GGG | + | chr8_3:61964305-61964324 | Msa1300420:CDS | 35.0% |
| AATTCATCCCTCTATGTTGT+AGG | + | chr8_3:61964540-61964559 | Msa1300420:intron | 35.0% | |
| ! | CCTGAAATCTTTTTAACGGT+TGG | - | chr8_3:61964583-61964602 | None:intergenic | 35.0% |
| CCAACCGTTAAAAAGATTTC+AGG | + | chr8_3:61964580-61964599 | Msa1300420:CDS | 35.0% | |
| AGCGACTGAAGTTAAAATTG+TGG | - | chr8_3:61964656-61964675 | None:intergenic | 35.0% | |
| ! | CTTTCAAAGACTTGCTTGAT+AGG | - | chr8_3:61964779-61964798 | None:intergenic | 35.0% |
| CTATCAAGCAAGTCTTTGAA+AGG | + | chr8_3:61964777-61964796 | Msa1300420:three_prime_UTR | 35.0% | |
| AAAGGAGGAAGCCAAATAAA+AGG | + | chr8_3:61964795-61964814 | Msa1300420:three_prime_UTR | 35.0% | |
| AAGGAGGAAGCCAAATAAAA+GGG | + | chr8_3:61964796-61964815 | Msa1300420:three_prime_UTR | 35.0% | |
| GATAGAACTAGAACCAGATA+TGG | - | chr8_3:61964855-61964874 | None:intergenic | 35.0% | |
| TCTACTTTCGAAATCTACAC+AGG | - | chr8_3:61964880-61964899 | None:intergenic | 35.0% | |
| CAAAGATGTCACTCTAATGT+TGG | - | chr8_3:61964908-61964927 | None:intergenic | 35.0% | |
| TCGAACAAACAAGACCAAAG+AGG | + | chr8_3:61961747-61961766 | Msa1300420:five_prime_UTR | 40.0% | |
| GGATCCACTGAGAAATAGAT+GGG | - | chr8_3:61961999-61962018 | None:intergenic | 40.0% | |
| AAAAATTCCCTCAGCACTTC+TGG | + | chr8_3:61962072-61962091 | Msa1300420:CDS | 40.0% | |
| TTCGTCTGCACTCACAAAAA+AGG | + | chr8_3:61962280-61962299 | Msa1300420:CDS | 40.0% | |
| TCGTCTGCACTCACAAAAAA+GGG | + | chr8_3:61962281-61962300 | Msa1300420:CDS | 40.0% | |
| AAAAGGGACAAGATACGAAG+CGG | + | chr8_3:61962297-61962316 | Msa1300420:CDS | 40.0% | |
| GATCCTGAATTCAAACAAGG+TGG | + | chr8_3:61962326-61962345 | Msa1300420:CDS | 40.0% | |
| ! | TGTCCACCTTGTTTGAATTC+AGG | - | chr8_3:61962332-61962351 | None:intergenic | 40.0% |
| TTAAACTTGTGCGGATGGAT+AGG | + | chr8_3:61962510-61962529 | Msa1300420:intron | 40.0% | |
| TAAACTTGTGCGGATGGATA+GGG | + | chr8_3:61962511-61962530 | Msa1300420:intron | 40.0% | |
| ! | GGTTGACTTTGTCTCTACAA+TGG | + | chr8_3:61962532-61962551 | Msa1300420:intron | 40.0% |
| ATCAATACAATCGTCCACCA+GGG | - | chr8_3:61962652-61962671 | None:intergenic | 40.0% | |
| ATCCTGAATTAGTCCGTTTG+TGG | + | chr8_3:61962670-61962689 | Msa1300420:intron | 40.0% | |
| TCCTGAATTAGTCCGTTTGT+GGG | + | chr8_3:61962671-61962690 | Msa1300420:intron | 40.0% | |
| ACGAATGGTGATCTTAGACT+TGG | - | chr8_3:61962738-61962757 | None:intergenic | 40.0% | |
| TTAGCGTTCCTATGCAAAAG+TGG | - | chr8_3:61962858-61962877 | None:intergenic | 40.0% | |
| ! | CTAATTAGGGTACTCTCTAC+AGG | + | chr8_3:61962883-61962902 | Msa1300420:intron | 40.0% |
| CTTGGATGCATTCTTTGACT+TGG | + | chr8_3:61962965-61962984 | Msa1300420:intron | 40.0% | |
| TGGCATCGCTAAATTGATTG+AGG | + | chr8_3:61963038-61963057 | Msa1300420:intron | 40.0% | |
| GGCATCGCTAAATTGATTGA+GGG | + | chr8_3:61963039-61963058 | Msa1300420:intron | 40.0% | |
| TCGCTAAATTGATTGAGGGA+TGG | + | chr8_3:61963043-61963062 | Msa1300420:intron | 40.0% | |
| TTTGTCACATTATGGTGAGG+CGG | + | chr8_3:61963070-61963089 | Msa1300420:intron | 40.0% | |
| ! | ATACAAGTTCTGGCCAATAG+TGG | + | chr8_3:61963136-61963155 | Msa1300420:CDS | 40.0% |
| GCTTTATGGGTACTAACAGA+AGG | + | chr8_3:61963181-61963200 | Msa1300420:CDS | 40.0% | |
| ! | GTGCATGAACTCTAAAGACT+CGG | + | chr8_3:61963213-61963232 | Msa1300420:CDS | 40.0% |
| AATAACACCACCAATGAGAG+CGG | - | chr8_3:61963248-61963267 | None:intergenic | 40.0% | |
| TCGTCTAATCACAACCTTCA+AGG | + | chr8_3:61963336-61963355 | Msa1300420:CDS | 40.0% | |
| TTCAGTTGTAGCAGATAGAG+TGG | + | chr8_3:61963458-61963477 | Msa1300420:intron | 40.0% | |
| AATTTGTGATTGTGTGGGTG+TGG | + | chr8_3:61963691-61963710 | Msa1300420:intron | 40.0% | |
| ATTTGTGATTGTGTGGGTGT+GGG | + | chr8_3:61963692-61963711 | Msa1300420:intron | 40.0% | |
| ACATTGTCATGGAATGGAAG+GGG | - | chr8_3:61963781-61963800 | None:intergenic | 40.0% | |
| TCAGGGTTGTTACATTGTCA+TGG | - | chr8_3:61963792-61963811 | None:intergenic | 40.0% | |
| CTTTATTAAGGGTTCGGATC+AGG | - | chr8_3:61963810-61963829 | None:intergenic | 40.0% | |
| CTGATCCGAACCCTTAATAA+AGG | + | chr8_3:61963808-61963827 | Msa1300420:intron | 40.0% | |
| TTTAAGCTTAAACTGCTCGG+GGG | + | chr8_3:61963854-61963873 | Msa1300420:intron | 40.0% | |
| AACTCTAGTCTCTAGCCAAT+AGG | - | chr8_3:61964018-61964037 | None:intergenic | 40.0% | |
| ! | ATTTTATCAGCCTGTGAGGA+AGG | + | chr8_3:61964198-61964217 | Msa1300420:intron | 40.0% |
| ! | TTTTATCAGCCTGTGAGGAA+GGG | + | chr8_3:61964199-61964218 | Msa1300420:intron | 40.0% |
| ! | AATGGTGGTGTGACAAAAAC+AGG | + | chr8_3:61964226-61964245 | Msa1300420:CDS | 40.0% |
| ! | GAACTTTTGACAATCAGGTG+TGG | + | chr8_3:61964304-61964323 | Msa1300420:CDS | 40.0% |
| CCAACAACCTACAACATAGA+GGG | - | chr8_3:61964550-61964569 | None:intergenic | 40.0% | |
| TCCAACAACCTACAACATAG+AGG | - | chr8_3:61964551-61964570 | None:intergenic | 40.0% | |
| TTGTAGGTTGTTGGAAATCC+AGG | + | chr8_3:61964556-61964575 | Msa1300420:intron | 40.0% | |
| !! | ATCTTTTTAACGGTTGGTCC+TGG | - | chr8_3:61964577-61964596 | None:intergenic | 40.0% |
| ! | TCAAAGACTTGCTTGATAGG+AGG | - | chr8_3:61964776-61964795 | None:intergenic | 40.0% |
| ! | TCAAGCAAGTCTTTGAAAGG+AGG | + | chr8_3:61964780-61964799 | Msa1300420:three_prime_UTR | 40.0% |
| CCAAATAAAAGGGCAGCATA+GGG | + | chr8_3:61964806-61964825 | Msa1300420:three_prime_UTR | 40.0% | |
| GGTTGCATTCCAAACCGAAT+AGG | - | chr8_3:61961805-61961824 | None:intergenic | 45.0% | |
| AAGAACAACCAACTACCACG+AGG | - | chr8_3:61961903-61961922 | None:intergenic | 45.0% | |
| ! | TGGACCCATCTATTTCTCAG+TGG | + | chr8_3:61961992-61962011 | Msa1300420:CDS | 45.0% |
| CGGATCCACTGAGAAATAGA+TGG | - | chr8_3:61962000-61962019 | None:intergenic | 45.0% | |
| !! | GTGAGCTCTGAATGCGATTA+AGG | - | chr8_3:61962049-61962068 | None:intergenic | 45.0% |
| TAATCGCATTCAGAGCTCAC+AGG | + | chr8_3:61962049-61962068 | Msa1300420:CDS | 45.0% | |
| AACAAGGTGGACAACGAAAC+TGG | + | chr8_3:61962339-61962358 | Msa1300420:CDS | 45.0% | |
| TCAATACAATCGTCCACCAG+GGG | - | chr8_3:61962651-61962670 | None:intergenic | 45.0% | |
| GATCAATACAATCGTCCACC+AGG | - | chr8_3:61962653-61962672 | None:intergenic | 45.0% | |
| AACAGAGGCAATGCCACTAT+TGG | - | chr8_3:61963152-61963171 | None:intergenic | 45.0% | |
| ATGGGTACTAACAGAAGGGA+AGG | + | chr8_3:61963186-61963205 | Msa1300420:CDS | 45.0% | |
| GCTCTAATTACCGCTCTCAT+TGG | + | chr8_3:61963235-61963254 | Msa1300420:CDS | 45.0% | |
| CTAATTACCGCTCTCATTGG+TGG | + | chr8_3:61963238-61963257 | Msa1300420:CDS | 45.0% | |
| !! | GCTCTCATTGGTGGTGTTAT+TGG | + | chr8_3:61963247-61963266 | Msa1300420:CDS | 45.0% |
| CTCCATTGCAGCAGCAATAA+TGG | - | chr8_3:61963273-61963292 | None:intergenic | 45.0% | |
| ATTGAAAGGGCTGGGTCATT+AGG | + | chr8_3:61963717-61963736 | Msa1300420:intron | 45.0% | |
| TTAAGCTTAAACTGCTCGGG+GGG | + | chr8_3:61963855-61963874 | Msa1300420:intron | 45.0% | |
| GGAATCATTTGAGGGAGGTT+AGG | - | chr8_3:61963892-61963911 | None:intergenic | 45.0% | |
| TGTGAGGAATCATTTGAGGG+AGG | - | chr8_3:61963897-61963916 | None:intergenic | 45.0% | |
| CGCGTAAGTCACATTCCTAT+TGG | + | chr8_3:61964000-61964019 | Msa1300420:intron | 45.0% | |
| ! | TGTGGCAGCATGGCATTTTA+AGG | - | chr8_3:61964053-61964072 | None:intergenic | 45.0% |
| GGCGCAACATTGCAATTTAG+TGG | + | chr8_3:61964412-61964431 | Msa1300420:CDS | 45.0% | |
| ATTCTGCTCTATTCGCCAGA+AGG | + | chr8_3:61964435-61964454 | Msa1300420:CDS | 45.0% | |
| CCCTCTATGTTGTAGGTTGT+TGG | + | chr8_3:61964547-61964566 | Msa1300420:intron | 45.0% | |
| GCCAAATAAAAGGGCAGCAT+AGG | + | chr8_3:61964805-61964824 | Msa1300420:three_prime_UTR | 45.0% | |
| ! | CCCTATGCTGCCCTTTTATT+TGG | - | chr8_3:61964809-61964828 | None:intergenic | 45.0% |
| ATGAAGAGGATGACGATGCA+TGG | + | chr8_3:61964967-61964986 | Msa1300420:three_prime_UTR | 45.0% | |
| TGACGATGCATGGCATTGTT+AGG | + | chr8_3:61964977-61964996 | Msa1300420:three_prime_UTR | 45.0% | |
| CGTGTTCCTCGTTGCCTATT+CGG | + | chr8_3:61961788-61961807 | Msa1300420:five_prime_UTR | 50.0% | |
| TCCTCGTTGCCTATTCGGTT+TGG | + | chr8_3:61961793-61961812 | Msa1300420:five_prime_UTR | 50.0% | |
| TCCAAACCGAATAGGCAACG+AGG | - | chr8_3:61961797-61961816 | None:intergenic | 50.0% | |
| AACAACCAACTACCACGAGG+TGG | - | chr8_3:61961900-61961919 | None:intergenic | 50.0% | |
| TTCTCAGTGGATCCGACCAT+TGG | + | chr8_3:61962005-61962024 | Msa1300420:CDS | 50.0% | |
| CAGTGACAGCAACCAATGGT+CGG | - | chr8_3:61962020-61962039 | None:intergenic | 50.0% | |
| CCAACAGTGACAGCAACCAA+TGG | - | chr8_3:61962024-61962043 | None:intergenic | 50.0% | |
| ! | CCATTGGTTGCTGTCACTGT+TGG | + | chr8_3:61962021-61962040 | Msa1300420:CDS | 50.0% |
| !! | AAGTGCACCAGAAGTGCTGA+GGG | - | chr8_3:61962082-61962101 | None:intergenic | 50.0% |
| AATACAATCGTCCACCAGGG+GGG | - | chr8_3:61962649-61962668 | None:intergenic | 50.0% | |
| CAATACAATCGTCCACCAGG+GGG | - | chr8_3:61962650-61962669 | None:intergenic | 50.0% | |
| !! | GCCCACAAACGGACTAATTC+AGG | - | chr8_3:61962675-61962694 | None:intergenic | 50.0% |
| GAATTAGTCCGTTTGTGGGC+CGG | + | chr8_3:61962675-61962694 | Msa1300420:intron | 50.0% | |
| TTCAGTATCCGGCCCACAAA+CGG | - | chr8_3:61962686-61962705 | None:intergenic | 50.0% | |
| TGAGGCGGTTGACCTGAATT+TGG | + | chr8_3:61963085-61963104 | Msa1300420:intron | 50.0% | |
| GGCCATTATTGCTGCTGCAA+TGG | + | chr8_3:61963268-61963287 | Msa1300420:CDS | 50.0% | |
| GACACATGGTCTTCTGAGCT+TGG | + | chr8_3:61963292-61963311 | Msa1300420:CDS | 50.0% | |
| TGTGGGTGTGGGACATTGAA+AGG | + | chr8_3:61963703-61963722 | Msa1300420:intron | 50.0% | |
| GTGGGTGTGGGACATTGAAA+GGG | + | chr8_3:61963704-61963723 | Msa1300420:intron | 50.0% | |
| TGTGGGACATTGAAAGGGCT+GGG | + | chr8_3:61963709-61963728 | Msa1300420:intron | 50.0% | |
| AAATGCCATGCTGCCACAAG+TGG | + | chr8_3:61964055-61964074 | Msa1300420:intron | 50.0% | |
| ATAAGCCACTTGTGGCAGCA+TGG | - | chr8_3:61964063-61964082 | None:intergenic | 50.0% | |
| CCATTTGTACCCTTCCTCAC+AGG | - | chr8_3:61964211-61964230 | None:intergenic | 50.0% | |
| ! | CCTGTGAGGAAGGGTACAAA+TGG | + | chr8_3:61964208-61964227 | Msa1300420:CDS | 50.0% |
| ! | GTGAGGAAGGGTACAAATGG+TGG | + | chr8_3:61964211-61964230 | Msa1300420:CDS | 50.0% |
| ACTTCCACATAGTCCTGCCA+CGG | - | chr8_3:61964374-61964393 | None:intergenic | 50.0% | |
| TTCCATTCCACTCCACCTCG+TGG | + | chr8_3:61961885-61961904 | Msa1300420:five_prime_UTR | 55.0% | |
| TACCACGAGGTGGAGTGGAA+TGG | - | chr8_3:61961890-61961909 | None:intergenic | 55.0% | |
| !! | CAAGTGCACCAGAAGTGCTG+AGG | - | chr8_3:61962083-61962102 | None:intergenic | 55.0% |
| AGCACTTCTGGTGCACTTGC+TGG | + | chr8_3:61962084-61962103 | Msa1300420:CDS | 55.0% | |
| ATACAATCGTCCACCAGGGG+GGG | - | chr8_3:61962648-61962667 | None:intergenic | 55.0% | |
| GCTGCTGCAATGGAGACACA+TGG | + | chr8_3:61963278-61963297 | Msa1300420:CDS | 55.0% | |
| GTGTGGGACATTGAAAGGGC+TGG | + | chr8_3:61963708-61963727 | Msa1300420:intron | 55.0% | |
| !! | GCAGCTGGTGGAAGTGTCAT+TGG | + | chr8_3:61964262-61964281 | Msa1300420:CDS | 55.0% |
| TAGTCCTGCCACGGTAGTGA+GGG | - | chr8_3:61964365-61964384 | None:intergenic | 55.0% | |
| ATAGTCCTGCCACGGTAGTG+AGG | - | chr8_3:61964366-61964385 | None:intergenic | 55.0% | |
| ACTACCGTGGCAGGACTATG+TGG | + | chr8_3:61964367-61964386 | Msa1300420:CDS | 55.0% | |
| CCAACTACCACGAGGTGGAG+TGG | - | chr8_3:61961895-61961914 | None:intergenic | 60.0% | |
| CCACTCCACCTCGTGGTAGT+TGG | + | chr8_3:61961892-61961911 | Msa1300420:five_prime_UTR | 60.0% | |
| TACAATCGTCCACCAGGGGG+GGG | - | chr8_3:61962647-61962666 | None:intergenic | 60.0% | |
| GGACTTCTAGCAGCTGCAGC+TGG | + | chr8_3:61964247-61964266 | Msa1300420:CDS | 60.0% | |
| CTTCTAGCAGCTGCAGCTGG+TGG | + | chr8_3:61964250-61964269 | Msa1300420:CDS | 60.0% | |
| GGTCATACCCCTCACTACCG+TGG | + | chr8_3:61964354-61964373 | Msa1300420:CDS | 60.0% | |
| ATACCCCTCACTACCGTGGC+AGG | + | chr8_3:61964358-61964377 | Msa1300420:CDS | 60.0% | |
| AGTCCTGCCACGGTAGTGAG+GGG | - | chr8_3:61964364-61964383 | None:intergenic | 60.0% | |
| CCAGGGGGGGGTCCAATTGT+TGG | - | chr8_3:61962635-61962654 | None:intergenic | 65.0% | |
| CCAACAATTGGACCCCCCCC+TGG | + | chr8_3:61962632-61962651 | Msa1300420:intron | 65.0% | |
| ACAATTGGACCCCCCCCTGG+TGG | + | chr8_3:61962635-61962654 | Msa1300420:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 61961729 | 61965011 | 61961729 | ID=Msa1300420;Name=Msa1300420 |
| chr8_3 | mRNA | 61961729 | 61965011 | 61961729 | ID=Msa1300420-mRNA-1;Parent=Msa1300420;Name=Msa1300420-mRNA-1;_AED=0.08;_eAED=0.08;_QI=262|1|1|1|1|1|5|318|290 |
| chr8_3 | exon | 61961729 | 61962145 | 61961729 | ID=Msa1300420-mRNA-1:exon:18343;Parent=Msa1300420-mRNA-1 |
| chr8_3 | exon | 61962247 | 61962360 | 61962247 | ID=Msa1300420-mRNA-1:exon:18344;Parent=Msa1300420-mRNA-1 |
| chr8_3 | exon | 61963135 | 61963357 | 61963135 | ID=Msa1300420-mRNA-1:exon:18345;Parent=Msa1300420-mRNA-1 |
| chr8_3 | exon | 61964208 | 61964456 | 61964208 | ID=Msa1300420-mRNA-1:exon:18346;Parent=Msa1300420-mRNA-1 |
| chr8_3 | exon | 61964562 | 61965011 | 61964562 | ID=Msa1300420-mRNA-1:exon:18347;Parent=Msa1300420-mRNA-1 |
| chr8_3 | five_prime_UTR | 61961729 | 61961990 | 61961729 | ID=Msa1300420-mRNA-1:five_prime_utr;Parent=Msa1300420-mRNA-1 |
| chr8_3 | CDS | 61961991 | 61962145 | 61961991 | ID=Msa1300420-mRNA-1:cds;Parent=Msa1300420-mRNA-1 |
| chr8_3 | CDS | 61962247 | 61962360 | 61962247 | ID=Msa1300420-mRNA-1:cds;Parent=Msa1300420-mRNA-1 |
| chr8_3 | CDS | 61963135 | 61963357 | 61963135 | ID=Msa1300420-mRNA-1:cds;Parent=Msa1300420-mRNA-1 |
| chr8_3 | CDS | 61964208 | 61964456 | 61964208 | ID=Msa1300420-mRNA-1:cds;Parent=Msa1300420-mRNA-1 |
| chr8_3 | CDS | 61964562 | 61964693 | 61964562 | ID=Msa1300420-mRNA-1:cds;Parent=Msa1300420-mRNA-1 |
| chr8_3 | three_prime_UTR | 61964694 | 61965011 | 61964694 | ID=Msa1300420-mRNA-1:three_prime_utr;Parent=Msa1300420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
