Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417370 | sp|O81643|VILI1_ARATH | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 3.23e-56 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417370 | A0A072V7S7 | 95.513 | 156 | 7 | 0 | 1 | 156 | 1 | 156 | 8.91e-100 | 317 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa1417370 | 0.848804 | 4.854147e-60 | -8.615850e-47 |
| Msa0017670 | Msa1417370 | 0.801225 | 9.953594e-49 | -8.615850e-47 |
| Msa0025160 | Msa1417370 | 0.860600 | 1.845145e-63 | -8.615850e-47 |
| Msa0027280 | Msa1417370 | 0.806679 | 7.318596e-50 | -8.615850e-47 |
| Msa0033220 | Msa1417370 | 0.823042 | 1.713966e-53 | -8.615850e-47 |
| Msa0034210 | Msa1417370 | 0.803983 | 2.686118e-49 | -8.615850e-47 |
| Msa0034700 | Msa1417370 | -0.809737 | 1.631852e-50 | -8.615850e-47 |
| Msa0035380 | Msa1417370 | 0.814903 | 1.215620e-51 | -8.615850e-47 |
| Msa0038530 | Msa1417370 | 0.815443 | 9.219853e-52 | -8.615850e-47 |
| Msa0042640 | Msa1417370 | 0.826642 | 2.425283e-54 | -8.615850e-47 |
| Msa0050660 | Msa1417370 | 0.846544 | 2.032378e-59 | -8.615850e-47 |
| Msa0050700 | Msa1417370 | 0.847484 | 1.123121e-59 | -8.615850e-47 |
| Msa0050790 | Msa1417370 | 0.839409 | 1.611832e-57 | -8.615850e-47 |
| Msa0067060 | Msa1417370 | 0.814807 | 1.276282e-51 | -8.615850e-47 |
| Msa0072520 | Msa1417370 | 0.848380 | 6.361641e-60 | -8.615850e-47 |
| Msa0077570 | Msa1417370 | -0.831454 | 1.654172e-55 | -8.615850e-47 |
| Msa0079880 | Msa1417370 | 0.824207 | 9.145529e-54 | -8.615850e-47 |
| Msa0080030 | Msa1417370 | 0.816379 | 5.700421e-52 | -8.615850e-47 |
| Msa0086250 | Msa1417370 | 0.810236 | 1.274317e-50 | -8.615850e-47 |
| Msa0094570 | Msa1417370 | 0.815283 | 1.000687e-51 | -8.615850e-47 |
| Msa0094790 | Msa1417370 | 0.825554 | 4.401131e-54 | -8.615850e-47 |
| Msa0102240 | Msa1417370 | 0.805014 | 1.637736e-49 | -8.615850e-47 |
| Msa0108880 | Msa1417370 | 0.801520 | 8.663868e-49 | -8.615850e-47 |
| Msa0113340 | Msa1417370 | 0.811530 | 6.686197e-51 | -8.615850e-47 |
| Msa1348170 | Msa1417370 | -0.826854 | 2.158568e-54 | -8.615850e-47 |
| Msa1356600 | Msa1417370 | -0.808568 | 2.904930e-50 | -8.615850e-47 |
| Msa1357070 | Msa1417370 | 0.808785 | 2.611232e-50 | -8.615850e-47 |
| Msa1362620 | Msa1417370 | 0.809886 | 1.515917e-50 | -8.615850e-47 |
| Msa1364410 | Msa1417370 | 0.827058 | 1.929705e-54 | -8.615850e-47 |
| Msa1364680 | Msa1417370 | 0.809400 | 1.927926e-50 | -8.615850e-47 |
| Msa1368750 | Msa1417370 | 0.804882 | 1.745203e-49 | -8.615850e-47 |
| Msa1372040 | Msa1417370 | 0.800525 | 1.383722e-48 | -8.615850e-47 |
| Msa1374790 | Msa1417370 | 0.808042 | 3.760825e-50 | -8.615850e-47 |
| Msa1381030 | Msa1417370 | 0.820592 | 6.321774e-53 | -8.615850e-47 |
| Msa1383310 | Msa1417370 | 0.815871 | 7.402048e-52 | -8.615850e-47 |
| Msa1384460 | Msa1417370 | 0.835048 | 2.105379e-56 | -8.615850e-47 |
| Msa1385260 | Msa1417370 | 0.805145 | 1.537716e-49 | -8.615850e-47 |
| Msa1387450 | Msa1417370 | -0.816883 | 4.395325e-52 | -8.615850e-47 |
| Msa1396240 | Msa1417370 | 0.821446 | 4.020091e-53 | -8.615850e-47 |
| Msa1406720 | Msa1417370 | 0.814228 | 1.713986e-51 | -8.615850e-47 |
| Msa1407810 | Msa1417370 | 0.807669 | 4.515064e-50 | -8.615850e-47 |
| Msa1407840 | Msa1417370 | 0.827001 | 1.990390e-54 | -8.615850e-47 |
| Msa1409410 | Msa1417370 | 0.840416 | 8.809524e-58 | -8.615850e-47 |
| Msa1410160 | Msa1417370 | 0.846208 | 2.508578e-59 | -8.615850e-47 |
| Msa1415540 | Msa1417370 | 0.823440 | 1.383287e-53 | -8.615850e-47 |
| Msa1417370 | Msa1417380 | 0.850172 | 2.016002e-60 | -8.615850e-47 |
| Msa1417370 | Msa1422860 | 0.810195 | 1.300301e-50 | -8.615850e-47 |
| Msa1417370 | Msa1433360 | 0.824474 | 7.915698e-54 | -8.615850e-47 |
| Msa1417370 | Msa1437780 | 0.807983 | 3.872446e-50 | -8.615850e-47 |
| Msa1417370 | Msa1437810 | 0.825122 | 5.567802e-54 | -8.615850e-47 |
| Msa1417370 | Msa1440430 | 0.816471 | 5.437585e-52 | -8.615850e-47 |
| Msa1417370 | Msa1440630 | 0.839606 | 1.433238e-57 | -8.615850e-47 |
| Msa1417370 | Msa1445530 | 0.802264 | 6.093160e-49 | -8.615850e-47 |
| Msa1417370 | Msa1450190 | 0.808051 | 3.744596e-50 | -8.615850e-47 |
| Msa1417370 | Msa1451820 | 0.807486 | 4.938460e-50 | -8.615850e-47 |
| Msa1417370 | Msa1452140 | 0.801938 | 7.110407e-49 | -8.615850e-47 |
| Msa1417370 | Msa1454500 | 0.803129 | 4.040051e-49 | -8.615850e-47 |
| Msa0607800 | Msa1417370 | 0.804706 | 1.899006e-49 | -8.615850e-47 |
| Msa0612520 | Msa1417370 | 0.822562 | 2.216138e-53 | -8.615850e-47 |
| Msa0616210 | Msa1417370 | 0.844371 | 7.879742e-59 | -8.615850e-47 |
| Msa0619710 | Msa1417370 | 0.869823 | 2.319259e-66 | -8.615850e-47 |
| Msa0620900 | Msa1417370 | 0.834391 | 3.079051e-56 | -8.615850e-47 |
| Msa0648040 | Msa1417370 | 0.801343 | 9.416318e-49 | -8.615850e-47 |
| Msa0655700 | Msa1417370 | 0.832789 | 7.737646e-56 | -8.615850e-47 |
| Msa0657710 | Msa1417370 | 0.838847 | 2.254671e-57 | -8.615850e-47 |
| Msa0657720 | Msa1417370 | 0.831855 | 1.317173e-55 | -8.615850e-47 |
| Msa0660090 | Msa1417370 | 0.834418 | 3.031516e-56 | -8.615850e-47 |
| Msa0666700 | Msa1417370 | 0.804291 | 2.318167e-49 | -8.615850e-47 |
| Msa0675330 | Msa1417370 | 0.812738 | 3.645839e-51 | -8.615850e-47 |
| Msa0687090 | Msa1417370 | 0.833566 | 4.955599e-56 | -8.615850e-47 |
| Msa0690740 | Msa1417370 | 0.800670 | 1.292701e-48 | -8.615850e-47 |
| Msa0695560 | Msa1417370 | 0.824369 | 8.379991e-54 | -8.615850e-47 |
| Msa0699540 | Msa1417370 | 0.844429 | 7.602511e-59 | -8.615850e-47 |
| Msa0702790 | Msa1417370 | 0.827523 | 1.492597e-54 | -8.615850e-47 |
| Msa0702800 | Msa1417370 | 0.825205 | 5.321515e-54 | -8.615850e-47 |
| Msa0706150 | Msa1417370 | 0.878651 | 2.362826e-69 | -8.615850e-47 |
| Msa0714520 | Msa1417370 | 0.805213 | 1.487882e-49 | -8.615850e-47 |
| Msa0716480 | Msa1417370 | 0.819649 | 1.039373e-52 | -8.615850e-47 |
| Msa0720410 | Msa1417370 | 0.825528 | 4.463082e-54 | -8.615850e-47 |
| Msa0722890 | Msa1417370 | 0.828072 | 1.101382e-54 | -8.615850e-47 |
| Msa0723090 | Msa1417370 | 0.847654 | 1.008681e-59 | -8.615850e-47 |
| Msa0725750 | Msa1417370 | 0.803789 | 2.948023e-49 | -8.615850e-47 |
| Msa0734250 | Msa1417370 | 0.819931 | 8.959735e-53 | -8.615850e-47 |
| Msa0738700 | Msa1417370 | 0.808375 | 3.194508e-50 | -8.615850e-47 |
| Msa0740710 | Msa1417370 | 0.805154 | 1.530890e-49 | -8.615850e-47 |
| Msa0745140 | Msa1417370 | 0.800263 | 1.564669e-48 | -8.615850e-47 |
| Msa0755930 | Msa1417370 | 0.800155 | 1.645720e-48 | -8.615850e-47 |
| Msa0760970 | Msa1417370 | 0.819691 | 1.016783e-52 | -8.615850e-47 |
| Msa0776640 | Msa1417370 | 0.802319 | 5.934848e-49 | -8.615850e-47 |
| Msa0778600 | Msa1417370 | 0.802885 | 4.536774e-49 | -8.615850e-47 |
| Msa0780910 | Msa1417370 | 0.803286 | 3.748560e-49 | -8.615850e-47 |
| Msa0792370 | Msa1417370 | 0.826340 | 2.863138e-54 | -8.615850e-47 |
| Msa0813160 | Msa1417370 | 0.804528 | 2.068626e-49 | -8.615850e-47 |
| Msa0828950 | Msa1417370 | 0.824182 | 9.269193e-54 | -8.615850e-47 |
| Msa0828960 | Msa1417370 | 0.831140 | 1.976174e-55 | -8.615850e-47 |
| Msa0837460 | Msa1417370 | 0.812509 | 4.090281e-51 | -8.615850e-47 |
| Msa0841590 | Msa1417370 | 0.825983 | 3.480300e-54 | -8.615850e-47 |
| Msa0121330 | Msa1417370 | 0.817148 | 3.831841e-52 | -8.615850e-47 |
| Msa0123070 | Msa1417370 | 0.802406 | 5.694918e-49 | -8.615850e-47 |
| Msa0129930 | Msa1417370 | -0.819165 | 1.339974e-52 | -8.615850e-47 |
| Msa0132700 | Msa1417370 | 0.835914 | 1.271195e-56 | -8.615850e-47 |
| Msa0140130 | Msa1417370 | 0.811981 | 5.334848e-51 | -8.615850e-47 |
| Msa0140380 | Msa1417370 | 0.800138 | 1.658932e-48 | -8.615850e-47 |
| Msa0141640 | Msa1417370 | 0.817366 | 3.423165e-52 | -8.615850e-47 |
| Msa0146650 | Msa1417370 | 0.839299 | 1.722078e-57 | -8.615850e-47 |
| Msa0161930 | Msa1417370 | 0.847304 | 1.258576e-59 | -8.615850e-47 |
| Msa0165640 | Msa1417370 | 0.809765 | 1.609252e-50 | -8.615850e-47 |
| Msa0176060 | Msa1417370 | 0.823429 | 1.391481e-53 | -8.615850e-47 |
| Msa0181880 | Msa1417370 | 0.820154 | 7.967703e-53 | -8.615850e-47 |
| Msa0200050 | Msa1417370 | 0.801396 | 9.185631e-49 | -8.615850e-47 |
| Msa0203080 | Msa1417370 | 0.825580 | 4.336971e-54 | -8.615850e-47 |
| Msa0221180 | Msa1417370 | 0.814350 | 1.611295e-51 | -8.615850e-47 |
| Msa0235290 | Msa1417370 | 0.800422 | 1.452132e-48 | -8.615850e-47 |
| Msa1228580 | Msa1417370 | 0.853728 | 1.972139e-61 | -8.615850e-47 |
| Msa1228630 | Msa1417370 | 0.829502 | 4.967528e-55 | -8.615850e-47 |
| Msa1242130 | Msa1417370 | 0.845859 | 3.122546e-59 | -8.615850e-47 |
| Msa1242160 | Msa1417370 | 0.805463 | 1.319133e-49 | -8.615850e-47 |
| Msa1250610 | Msa1417370 | 0.842738 | 2.152340e-58 | -8.615850e-47 |
| Msa1250660 | Msa1417370 | 0.803666 | 3.125795e-49 | -8.615850e-47 |
| Msa1254540 | Msa1417370 | 0.803645 | 3.158293e-49 | -8.615850e-47 |
| Msa1263780 | Msa1417370 | 0.815076 | 1.112862e-51 | -8.615850e-47 |
| Msa1265450 | Msa1417370 | 0.832557 | 8.830051e-56 | -8.615850e-47 |
| Msa1283930 | Msa1417370 | 0.808498 | 3.006454e-50 | -8.615850e-47 |
| Msa1283960 | Msa1417370 | 0.851625 | 7.857092e-61 | -8.615850e-47 |
| Msa1290380 | Msa1417370 | 0.827140 | 1.843566e-54 | -8.615850e-47 |
| Msa1290440 | Msa1417370 | 0.823458 | 1.370571e-53 | -8.615850e-47 |
| Msa1300420 | Msa1417370 | 0.825751 | 3.952450e-54 | -8.615850e-47 |
| Msa1300460 | Msa1417370 | 0.810942 | 8.969727e-51 | -8.615850e-47 |
| Msa1308850 | Msa1417370 | 0.864473 | 1.186078e-64 | -8.615850e-47 |
| Msa1322960 | Msa1417370 | 0.808729 | 2.684489e-50 | -8.615850e-47 |
| Msa1326640 | Msa1417370 | 0.840884 | 6.644961e-58 | -8.615850e-47 |
| Msa1326680 | Msa1417370 | 0.843080 | 1.745424e-58 | -8.615850e-47 |
| Msa1327800 | Msa1417370 | 0.840414 | 8.819719e-58 | -8.615850e-47 |
| Msa1341750 | Msa1417370 | 0.807225 | 5.609216e-50 | -8.615850e-47 |
| Msa1342810 | Msa1417370 | 0.804161 | 2.466783e-49 | -8.615850e-47 |
| Msa0365210 | Msa1417370 | 0.835570 | 1.554287e-56 | -8.615850e-47 |
| Msa0367690 | Msa1417370 | 0.808212 | 3.460754e-50 | -8.615850e-47 |
| Msa0375330 | Msa1417370 | -0.830582 | 2.707334e-55 | -8.615850e-47 |
| Msa0381730 | Msa1417370 | 0.814947 | 1.188575e-51 | -8.615850e-47 |
| Msa0383000 | Msa1417370 | 0.809035 | 2.308082e-50 | -8.615850e-47 |
| Msa0384870 | Msa1417370 | 0.830645 | 2.612902e-55 | -8.615850e-47 |
| Msa0394500 | Msa1417370 | 0.806558 | 7.761703e-50 | -8.615850e-47 |
| Msa0412790 | Msa1417370 | 0.800712 | 1.266968e-48 | -8.615850e-47 |
| Msa0415450 | Msa1417370 | 0.814044 | 1.882623e-51 | -8.615850e-47 |
| Msa0431200 | Msa1417370 | 0.815825 | 7.579106e-52 | -8.615850e-47 |
| Msa0432010 | Msa1417370 | 0.805162 | 1.524626e-49 | -8.615850e-47 |
| Msa0433150 | Msa1417370 | 0.806651 | 7.417926e-50 | -8.615850e-47 |
| Msa0435210 | Msa1417370 | 0.822562 | 2.216138e-53 | -8.615850e-47 |
| Msa0437620 | Msa1417370 | 0.827470 | 1.537359e-54 | -8.615850e-47 |
| Msa0455970 | Msa1417370 | 0.803211 | 3.883671e-49 | -8.615850e-47 |
| Msa0457560 | Msa1417370 | 0.860275 | 2.314677e-63 | -8.615850e-47 |
| Msa0457570 | Msa1417370 | 0.980322 | 5.947940e-150 | -8.615850e-47 |
| Msa0460070 | Msa1417370 | 0.816519 | 5.304032e-52 | -8.615850e-47 |
| Msa0466520 | Msa1417370 | 0.812863 | 3.422839e-51 | -8.615850e-47 |
| Msa0479320 | Msa1417370 | 0.839412 | 1.609197e-57 | -8.615850e-47 |
| Msa0481670 | Msa1417370 | 0.814284 | 1.665904e-51 | -8.615850e-47 |
| Msa0994720 | Msa1417370 | 0.805356 | 1.388954e-49 | -8.615850e-47 |
| Msa1002640 | Msa1417370 | 0.807139 | 5.847776e-50 | -8.615850e-47 |
| Msa1019420 | Msa1417370 | 0.808346 | 3.240741e-50 | -8.615850e-47 |
| Msa1021590 | Msa1417370 | 0.801512 | 8.696684e-49 | -8.615850e-47 |
| Msa1042160 | Msa1417370 | 0.806906 | 6.552922e-50 | -8.615850e-47 |
| Msa1042190 | Msa1417370 | 0.811241 | 7.723511e-51 | -8.615850e-47 |
| Msa1042300 | Msa1417370 | 0.825437 | 4.690839e-54 | -8.615850e-47 |
| Msa1044250 | Msa1417370 | 0.827537 | 1.480978e-54 | -8.615850e-47 |
| Msa1078820 | Msa1417370 | 0.847097 | 1.434420e-59 | -8.615850e-47 |
| Msa1078970 | Msa1417370 | 0.801575 | 8.439090e-49 | -8.615850e-47 |
| Msa1079640 | Msa1417370 | 0.811074 | 8.396575e-51 | -8.615850e-47 |
| Msa1081690 | Msa1417370 | 0.829109 | 6.187436e-55 | -8.615850e-47 |
| Msa1105640 | Msa1417370 | 0.804988 | 1.658506e-49 | -8.615850e-47 |
| Msa1106590 | Msa1417370 | 0.826013 | 3.423746e-54 | -8.615850e-47 |
| Msa0241750 | Msa1417370 | 0.806384 | 8.444579e-50 | -8.615850e-47 |
| Msa0262750 | Msa1417370 | 0.845706 | 3.434684e-59 | -8.615850e-47 |
| Msa0264230 | Msa1417370 | 0.807989 | 3.860823e-50 | -8.615850e-47 |
| Msa0284800 | Msa1417370 | 0.880716 | 4.365569e-70 | -8.615850e-47 |
| Msa0300470 | Msa1417370 | 0.831619 | 1.506394e-55 | -8.615850e-47 |
| Msa0302200 | Msa1417370 | 0.806923 | 6.497016e-50 | -8.615850e-47 |
| Msa0307670 | Msa1417370 | 0.821597 | 3.709241e-53 | -8.615850e-47 |
| Msa0313900 | Msa1417370 | 0.818038 | 2.414629e-52 | -8.615850e-47 |
| Msa0330520 | Msa1417370 | 0.856894 | 2.362190e-62 | -8.615850e-47 |
| Msa0337970 | Msa1417370 | 0.835351 | 1.764901e-56 | -8.615850e-47 |
| Msa0339530 | Msa1417370 | 0.805254 | 1.459048e-49 | -8.615850e-47 |
| Msa0347530 | Msa1417370 | 0.809923 | 1.488546e-50 | -8.615850e-47 |
| Msa0347780 | Msa1417370 | 0.819778 | 9.712150e-53 | -8.615850e-47 |
| Msa1123970 | Msa1417370 | 0.848974 | 4.353586e-60 | -8.615850e-47 |
| Msa1125250 | Msa1417370 | 0.835098 | 2.045157e-56 | -8.615850e-47 |
| Msa1127970 | Msa1417370 | 0.815360 | 9.622046e-52 | -8.615850e-47 |
| Msa1130780 | Msa1417370 | 0.829425 | 5.184798e-55 | -8.615850e-47 |
| Msa1149910 | Msa1417370 | 0.828960 | 6.724260e-55 | -8.615850e-47 |
| Msa1154320 | Msa1417370 | 0.829630 | 4.622753e-55 | -8.615850e-47 |
| Msa1166190 | Msa1417370 | 0.840672 | 7.551202e-58 | -8.615850e-47 |
| Msa1166290 | Msa1417370 | 0.841591 | 4.329223e-58 | -8.615850e-47 |
| Msa1167470 | Msa1417370 | 0.811122 | 8.199041e-51 | -8.615850e-47 |
| Msa1169650 | Msa1417370 | 0.846719 | 1.820517e-59 | -8.615850e-47 |
| Msa1184890 | Msa1417370 | 0.802419 | 5.661040e-49 | -8.615850e-47 |
| Msa1192560 | Msa1417370 | 0.827921 | 1.197657e-54 | -8.615850e-47 |
| Msa1192590 | Msa1417370 | 0.822562 | 2.216938e-53 | -8.615850e-47 |
| Msa1194240 | Msa1417370 | 0.838625 | 2.573399e-57 | -8.615850e-47 |
| Msa1205110 | Msa1417370 | 0.818654 | 1.751162e-52 | -8.615850e-47 |
| Msa1214310 | Msa1417370 | 0.819010 | 1.453268e-52 | -8.615850e-47 |
| Msa1221120 | Msa1417370 | 0.833126 | 6.380168e-56 | -8.615850e-47 |
| Msa0486460 | Msa1417370 | 0.812736 | 3.649591e-51 | -8.615850e-47 |
| Msa0504720 | Msa1417370 | 0.810287 | 1.242724e-50 | -8.615850e-47 |
| Msa0513080 | Msa1417370 | 0.801909 | 7.207609e-49 | -8.615850e-47 |
| Msa0513970 | Msa1417370 | 0.847521 | 1.097414e-59 | -8.615850e-47 |
| Msa0520260 | Msa1417370 | 0.820600 | 6.297462e-53 | -8.615850e-47 |
| Msa0520870 | Msa1417370 | 0.800593 | 1.340241e-48 | -8.615850e-47 |
| Msa0521320 | Msa1417370 | 0.814084 | 1.844463e-51 | -8.615850e-47 |
| Msa0521830 | Msa1417370 | 0.822676 | 2.085881e-53 | -8.615850e-47 |
| Msa0528570 | Msa1417370 | 0.821109 | 4.808558e-53 | -8.615850e-47 |
| Msa0531960 | Msa1417370 | 0.809616 | 1.732927e-50 | -8.615850e-47 |
| Msa0541300 | Msa1417370 | 0.820562 | 6.423136e-53 | -8.615850e-47 |
| Msa0541310 | Msa1417370 | 0.819949 | 8.878209e-53 | -8.615850e-47 |
| Msa0550050 | Msa1417370 | 0.809037 | 2.306407e-50 | -8.615850e-47 |
| Msa0562350 | Msa1417370 | 0.825931 | 3.580479e-54 | -8.615850e-47 |
| Msa0566280 | Msa1417370 | 0.809143 | 2.188937e-50 | -8.615850e-47 |
| Msa0567570 | Msa1417370 | 0.805310 | 1.420118e-49 | -8.615850e-47 |
| Msa0570010 | Msa1417370 | 0.876354 | 1.493117e-68 | -8.615850e-47 |
| Msa0580810 | Msa1417370 | 0.807377 | 5.208634e-50 | -8.615850e-47 |
| Msa0585020 | Msa1417370 | 0.809982 | 1.445785e-50 | -8.615850e-47 |
| Msa0597270 | Msa1417370 | 0.809762 | 1.611625e-50 | -8.615850e-47 |
| Msa0859290 | Msa1417370 | 0.816540 | 5.245502e-52 | -8.615850e-47 |
| Msa0865420 | Msa1417370 | 0.807896 | 4.040154e-50 | -8.615850e-47 |
| Msa0866530 | Msa1417370 | 0.817353 | 3.446962e-52 | -8.615850e-47 |
| Msa0903590 | Msa1417370 | -0.800430 | 1.446601e-48 | -8.615850e-47 |
| Msa0909260 | Msa1417370 | 0.811446 | 6.973707e-51 | -8.615850e-47 |
| Msa0921590 | Msa1417370 | 0.810336 | 1.212799e-50 | -8.615850e-47 |
| Msa0935740 | Msa1417370 | 0.826026 | 3.399979e-54 | -8.615850e-47 |
| Msa0956350 | Msa1417370 | 0.807696 | 4.456447e-50 | -8.615850e-47 |
| Msa0972740 | Msa1417370 | 0.817597 | 3.037124e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417370 | MtrunA17_Chr3g0104551 | 95.513 | 156 | 7 | 0 | 1 | 156 | 1 | 156 | 2.04e-102 | 318 |
| Msa1417370 | MtrunA17_Chr3g0111621 | 72.932 | 133 | 28 | 2 | 160 | 285 | 2 | 133 | 4.89e-55 | 174 |
| Msa1417370 | MtrunA17_Chr8g0336641 | 72.932 | 133 | 28 | 2 | 160 | 285 | 2 | 133 | 4.89e-55 | 174 |
| Msa1417370 | MtrunA17_Chr4g0011951 | 72.180 | 133 | 29 | 2 | 160 | 285 | 2 | 133 | 4.89e-55 | 174 |
| Msa1417370 | MtrunA17_Chr1g0149321 | 72.932 | 133 | 28 | 2 | 160 | 285 | 2 | 133 | 4.89e-55 | 174 |
| Msa1417370 | MtrunA17_Chr5g0427451 | 72.932 | 133 | 28 | 2 | 160 | 285 | 2 | 133 | 7.80e-55 | 174 |
| Msa1417370 | MtrunA17_Chr5g0434041 | 75.188 | 133 | 25 | 2 | 160 | 285 | 2 | 133 | 3.88e-54 | 172 |
| Msa1417370 | MtrunA17_Chr3g0089801 | 74.436 | 133 | 26 | 2 | 160 | 285 | 2 | 133 | 8.03e-54 | 171 |
| Msa1417370 | MtrunA17_Chr3g0084951 | 69.925 | 133 | 32 | 2 | 160 | 285 | 2 | 133 | 4.86e-48 | 156 |
| Msa1417370 | MtrunA17_Chr1g0207591 | 69.925 | 133 | 32 | 2 | 160 | 285 | 2 | 133 | 4.86e-48 | 156 |
| Msa1417370 | MtrunA17_Chr4g0004731 | 69.173 | 133 | 33 | 2 | 160 | 285 | 2 | 133 | 5.25e-47 | 154 |
| Msa1417370 | MtrunA17_Chr1g0175371 | 77.119 | 118 | 19 | 2 | 175 | 285 | 1 | 117 | 1.71e-45 | 149 |
| Msa1417370 | MtrunA17_Chr3g0128191 | 76.271 | 118 | 20 | 2 | 175 | 285 | 1 | 117 | 8.36e-45 | 147 |
| Msa1417370 | MtrunA17_Chr1g0207621 | 76.271 | 118 | 20 | 2 | 175 | 285 | 1 | 117 | 8.92e-45 | 147 |
| Msa1417370 | MtrunA17_Chr3g0105531 | 81.633 | 98 | 18 | 0 | 188 | 285 | 14 | 111 | 6.52e-44 | 145 |
| Msa1417370 | MtrunA17_Chr2g0298121 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 1.43e-43 | 158 |
| Msa1417370 | MtrunA17_Chr1g0173371 | 48.026 | 152 | 78 | 1 | 6 | 156 | 6 | 157 | 1.43e-39 | 147 |
| Msa1417370 | MtrunA17_Chr7g0257461 | 47.771 | 157 | 81 | 1 | 1 | 156 | 1 | 157 | 5.35e-39 | 145 |
| Msa1417370 | MtrunA17_Chr7g0257461 | 29.752 | 121 | 82 | 1 | 4 | 124 | 381 | 498 | 2.00e-11 | 64.3 |
| Msa1417370 | MtrunA17_Chr7g0244351 | 86.207 | 87 | 12 | 0 | 188 | 274 | 14 | 100 | 2.49e-36 | 125 |
| Msa1417370 | MtrunA17_Chr2g0289261 | 69.231 | 104 | 24 | 2 | 175 | 271 | 1 | 103 | 3.72e-36 | 125 |
| Msa1417370 | MtrunA17_Chr3g0099681 | 64.493 | 138 | 35 | 3 | 161 | 285 | 3 | 139 | 8.58e-36 | 125 |
| Msa1417370 | MtrunA17_Chr6g0469641 | 72.115 | 104 | 21 | 2 | 175 | 271 | 1 | 103 | 7.62e-28 | 103 |
| Msa1417370 | MtrunA17_Chr2g0314341 | 71.277 | 94 | 19 | 2 | 188 | 274 | 14 | 106 | 4.77e-27 | 102 |
| Msa1417370 | MtrunA17_Chr2g0294211 | 71.277 | 94 | 19 | 2 | 188 | 274 | 14 | 106 | 4.77e-27 | 102 |
| Msa1417370 | MtrunA17_Chr3g0105061 | 71.277 | 94 | 19 | 2 | 188 | 274 | 14 | 106 | 4.77e-27 | 102 |
| Msa1417370 | MtrunA17_Chr6g0449671 | 71.277 | 94 | 19 | 2 | 188 | 274 | 14 | 106 | 4.77e-27 | 102 |
| Msa1417370 | MtrunA17_Chr4g0063441 | 69.663 | 89 | 19 | 2 | 190 | 271 | 16 | 103 | 6.17e-26 | 99.0 |
| Msa1417370 | MtrunA17_Chr3g0134251 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 8.47e-26 | 98.6 |
| Msa1417370 | MtrunA17_Chr3g0128261 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 8.47e-26 | 98.6 |
| Msa1417370 | MtrunA17_Chr3g0127191 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 8.47e-26 | 98.6 |
| Msa1417370 | MtrunA17_Chr2g0305811 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 8.47e-26 | 98.6 |
| Msa1417370 | MtrunA17_Chr1g0184921 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 1.02e-25 | 98.6 |
| Msa1417370 | MtrunA17_Chr4g0072061 | 52.128 | 94 | 44 | 1 | 57 | 149 | 6 | 99 | 2.01e-25 | 103 |
| Msa1417370 | MtrunA17_Chr4g0003171 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 2.19e-25 | 97.8 |
| Msa1417370 | MtrunA17_Chr6g0456441 | 71.429 | 91 | 18 | 2 | 188 | 271 | 14 | 103 | 2.33e-25 | 97.4 |
| Msa1417370 | MtrunA17_Chr3g0095701 | 70.330 | 91 | 19 | 2 | 188 | 271 | 14 | 103 | 3.20e-25 | 97.1 |
| Msa1417370 | MtrunA17_Chr4g0043361 | 52.846 | 123 | 44 | 3 | 176 | 285 | 4 | 125 | 1.56e-19 | 82.4 |
| Msa1417370 | MtrunA17_Chr1g0170191 | 74.194 | 62 | 10 | 1 | 160 | 215 | 2 | 63 | 3.97e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417370 | AT2G29890.4 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 2.78e-57 | 197 |
| Msa1417370 | AT2G29890.3 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 2.87e-57 | 197 |
| Msa1417370 | AT2G29890.2 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 3.25e-57 | 197 |
| Msa1417370 | AT2G29890.1 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 3.28e-57 | 197 |
| Msa1417370 | AT2G29890.5 | 57.051 | 156 | 67 | 0 | 1 | 156 | 1 | 156 | 3.28e-57 | 197 |
| Msa1417370 | AT4G30160.2 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 2.11e-43 | 158 |
| Msa1417370 | AT4G30160.3 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 2.22e-43 | 158 |
| Msa1417370 | AT4G30160.4 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 2.22e-43 | 158 |
| Msa1417370 | AT4G30160.1 | 48.408 | 157 | 80 | 1 | 1 | 156 | 1 | 157 | 2.22e-43 | 158 |
| Msa1417370 | AT2G41740.2 | 50.980 | 153 | 74 | 1 | 5 | 156 | 3 | 155 | 8.47e-42 | 154 |
| Msa1417370 | AT2G41740.1 | 50.980 | 153 | 74 | 1 | 5 | 156 | 3 | 155 | 8.47e-42 | 154 |
| Msa1417370 | AT3G57410.4 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa1417370 | AT3G57410.1 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa1417370 | AT3G57410.9 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa1417370 | AT3G57410.5 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa1417370 | AT3G57410.3 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa1417370 | AT3G57410.2 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa1417370 | AT3G57410.7 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa1417370 | AT3G57410.8 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 3.52e-41 | 152 |
| Msa1417370 | AT3G57410.10 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 5.29e-41 | 150 |
| Msa1417370 | AT3G57410.6 | 51.634 | 153 | 73 | 1 | 5 | 156 | 5 | 157 | 6.30e-41 | 151 |
| Msa1417370 | AT5G57320.2 | 46.497 | 157 | 83 | 1 | 1 | 156 | 1 | 157 | 1.32e-39 | 147 |
| Msa1417370 | AT5G57320.1 | 46.497 | 157 | 83 | 1 | 1 | 156 | 1 | 157 | 1.32e-39 | 147 |
| Msa1417370 | AT2G10975.1 | 44.915 | 118 | 45 | 2 | 174 | 285 | 28 | 131 | 1.28e-15 | 72.4 |
| Msa1417370 | AT3G29645.1 | 47.312 | 93 | 48 | 1 | 193 | 285 | 45 | 136 | 3.30e-14 | 68.6 |
Find 83 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATAGGCATTGGCTTTA+TGG | 0.089873 | tig0024470:-50027 | None:intergenic |
| CTCATTATGACATTCATTAT+TGG | 0.159008 | tig0024470:+50566 | Msa1417370:CDS |
| GAATGTTCAATTTACTTTAA+AGG | 0.213530 | tig0024470:+50950 | Msa1417370:CDS |
| ATAGAAACTTCTGTGATTCT+TGG | 0.247886 | tig0024470:-50806 | None:intergenic |
| GAATGGTCATTTATATTTGA+TGG | 0.284489 | tig0024470:-48828 | None:intergenic |
| CCACGTTATGGTAGTCAAAT+AGG | 0.299743 | tig0024470:+50999 | Msa1417370:CDS |
| AAAAGAGTTGTTGGAAAAGT+TGG | 0.329591 | tig0024470:+51313 | Msa1417370:CDS |
| TTAGCTGCCTCCCTACCTAT+TGG | 0.330747 | tig0024470:-51092 | None:intergenic |
| TCCAAGTCTTTATTGATAAT+AGG | 0.343729 | tig0024470:-50041 | None:intergenic |
| GATCGTGCAGCGTTCAATAT+AGG | 0.353176 | tig0024470:+50772 | Msa1417370:CDS |
| CAGAACTATGTATGCACTTC+CGG | 0.355721 | tig0024470:-50424 | None:intergenic |
| CCGGTCATCGAGATGCTCTT+CGG | 0.370153 | tig0024470:-51288 | None:intergenic |
| TTCTCAGTGGATTGGAAGTC+TGG | 0.374280 | tig0024470:+50343 | Msa1417370:intron |
| TATGACATTCATTATTGGTT+GGG | 0.378347 | tig0024470:+50571 | Msa1417370:CDS |
| AGAGTTCATCTTGGTGCAAC+AGG | 0.385758 | tig0024470:+51220 | Msa1417370:CDS |
| TGAAGTAAACACTCCTTCAA+TGG | 0.402679 | tig0024470:-50853 | None:intergenic |
| TGCTGCTGCCTTGGAGGAGG+TGG | 0.404578 | tig0024470:+51142 | Msa1417370:CDS |
| CAAGGATGCTGCTGCCTTGG+AGG | 0.418485 | tig0024470:+51136 | Msa1417370:CDS |
| CTCCGTGATCAACCACGTTA+TGG | 0.423789 | tig0024470:+50987 | Msa1417370:CDS |
| CTTGAGTTGGATGCAGCCTT+AGG | 0.425710 | tig0024470:+50750 | Msa1417370:CDS |
| AAGCAAGGATGCTGCTGCCT+TGG | 0.426063 | tig0024470:+51133 | Msa1417370:CDS |
| TGCCTTGGAGGAGGTGGAAA+AGG | 0.440778 | tig0024470:+51148 | Msa1417370:CDS |
| GGATCTAGTGCTCGTCCAAT+AGG | 0.443830 | tig0024470:+51077 | Msa1417370:CDS |
| AATTTACTTTAAAGGAAGAA+TGG | 0.457064 | tig0024470:+50958 | Msa1417370:CDS |
| ACTTTATATTCTCAGTGGAT+TGG | 0.458509 | tig0024470:+50335 | Msa1417370:intron |
| ATCGTGCAGCGTTCAATATA+GGG | 0.463628 | tig0024470:+50773 | Msa1417370:CDS |
| CAAGTGTTGCTTTGAGTTGG+TGG | 0.464162 | tig0024470:+49993 | Msa1417370:five_prime_UTR |
| AGTCAAATAGGAGGAAATGT+TGG | 0.466610 | tig0024470:+51011 | Msa1417370:CDS |
| GGATGCTGCTGCCTTGGAGG+AGG | 0.471304 | tig0024470:+51139 | Msa1417370:CDS |
| CCTTGTTTAATACCCATTGA+AGG | 0.471785 | tig0024470:+50840 | Msa1417370:CDS |
| GAAGTAAACACTCCTTCAAT+GGG | 0.472686 | tig0024470:-50852 | None:intergenic |
| TACTATGTGGCAAATGTGAA+TGG | 0.475240 | tig0024470:+48857 | Msa1417370:five_prime_UTR |
| ACAATTGAAAGAGTTCATCT+TGG | 0.477117 | tig0024470:+51211 | Msa1417370:CDS |
| TTATGACATTCATTATTGGT+TGG | 0.487003 | tig0024470:+50570 | Msa1417370:CDS |
| AGTCAGCCTGTACACATGTA+AGG | 0.489217 | tig0024470:+50905 | Msa1417370:CDS |
| TCAAAGCAAGGGAATTTGAA+TGG | 0.490607 | tig0024470:+50873 | Msa1417370:CDS |
| ATAGGAGGAAATGTTGGGTC+AGG | 0.490770 | tig0024470:+51017 | Msa1417370:CDS |
| GCTCCTGCAGTTTGAAATGC+AGG | 0.491293 | tig0024470:-50065 | None:intergenic |
| ACCATTCTTGCTTTACTATG+TGG | 0.492980 | tig0024470:+48844 | Msa1417370:five_prime_UTR |
| GCCACATAGTAAAGCAAGAA+TGG | 0.494650 | tig0024470:-48845 | None:intergenic |
| GTTGGGAAATGACACAAAGA+AGG | 0.494738 | tig0024470:+50588 | Msa1417370:CDS |
| CGAAGGTCTGACTCTGACAC+TGG | 0.501618 | tig0024470:-50390 | None:intergenic |
| GTCAAATAGGAGGAAATGTT+GGG | 0.507942 | tig0024470:+51012 | Msa1417370:CDS |
| TTGAACGCTGCACGATCCTA+AGG | 0.510999 | tig0024470:-50766 | None:intergenic |
| TTTGCAGGTGGATTCAAGCT+TGG | 0.511419 | tig0024470:+50713 | Msa1417370:intron |
| GATCCTGCATTTCAAACTGC+AGG | 0.511602 | tig0024470:+50062 | Msa1417370:CDS |
| CCTTCAATGGGTATTAAACA+AGG | 0.525933 | tig0024470:-50840 | None:intergenic |
| GCCTATTATCAATAAAGACT+TGG | 0.530965 | tig0024470:+50040 | Msa1417370:CDS |
| CTGACACTGGCACCAACTGT+TGG | 0.535317 | tig0024470:-50377 | None:intergenic |
| CCGAAGAGCATCTCGATGAC+CGG | 0.535989 | tig0024470:+51288 | Msa1417370:CDS |
| TCTTTATTGATAATAGGCAT+TGG | 0.537651 | tig0024470:-50035 | None:intergenic |
| AATCAAGTGTTGCTTTGAGT+TGG | 0.541137 | tig0024470:+49990 | Msa1417370:five_prime_UTR |
| GGTTGAATTCAAAGAAATCA+AGG | 0.543930 | tig0024470:+51175 | Msa1417370:CDS |
| GACCTTCGAAAATTCTATGC+CGG | 0.549137 | tig0024470:+50405 | Msa1417370:CDS |
| CTAGTGCTCGTCCAATAGGT+AGG | 0.553012 | tig0024470:+51081 | Msa1417370:CDS |
| TACATGTGTACAGGCTGACT+TGG | 0.553621 | tig0024470:-50902 | None:intergenic |
| GTTCAATATAGGGAAATTCA+AGG | 0.553914 | tig0024470:+50783 | Msa1417370:CDS |
| GGTCTCCCTTACATGTGTAC+AGG | 0.555899 | tig0024470:-50911 | None:intergenic |
| ATCAGACAAAGCACTTGAGT+TGG | 0.566926 | tig0024470:+50737 | Msa1417370:CDS |
| GGAGTGTTTACTTCAAAGCA+AGG | 0.574599 | tig0024470:+50861 | Msa1417370:CDS |
| TACCATAACGTGGTTGATCA+CGG | 0.578164 | tig0024470:-50989 | None:intergenic |
| TGGAGGAGGTGGAAAAGGAG+TGG | 0.580098 | tig0024470:+51153 | Msa1417370:CDS |
| GGTTCAACAGAAAACTGAGA+AGG | 0.585022 | tig0024470:-48948 | None:intergenic |
| CAATAATGAATGTCATAATG+AGG | 0.586659 | tig0024470:-50565 | None:intergenic |
| ACTATGTGGCAAATGTGAAT+GGG | 0.589039 | tig0024470:+48858 | Msa1417370:five_prime_UTR |
| AATGTTGGGTCAGGAAGTAG+TGG | 0.595306 | tig0024470:+51026 | Msa1417370:CDS |
| CATTCTTCCCACATGCAACA+TGG | 0.607764 | tig0024470:-50932 | None:intergenic |
| TAGTGCTCGTCCAATAGGTA+GGG | 0.609095 | tig0024470:+51082 | Msa1417370:CDS |
| GTCAGCCTGTACACATGTAA+GGG | 0.612700 | tig0024470:+50906 | Msa1417370:CDS |
| AAAACTAAGAACAAGAGTGA+TGG | 0.613289 | tig0024470:-48920 | None:intergenic |
| AATGAATGTCATAATGAGGA+GGG | 0.613936 | tig0024470:-50561 | None:intergenic |
| TAATGAATGTCATAATGAGG+AGG | 0.621615 | tig0024470:-50562 | None:intergenic |
| AGATCTCACGAGGACTCTGT+AGG | 0.621974 | tig0024470:+51056 | Msa1417370:CDS |
| GGAGGAGGTGGAAAAGGAGT+GGG | 0.622268 | tig0024470:+51154 | Msa1417370:CDS |
| TGCTCGTCCAATAGGTAGGG+AGG | 0.627205 | tig0024470:+51085 | Msa1417370:CDS |
| GACAAAGAAAGAACAAAACA+TGG | 0.629176 | tig0024470:-48890 | None:intergenic |
| CGTTATGGTAGTCAAATAGG+AGG | 0.629909 | tig0024470:+51002 | Msa1417370:CDS |
| CCTATTTGACTACCATAACG+TGG | 0.638091 | tig0024470:-50999 | None:intergenic |
| GAGTGTTTACTTCAAAGCAA+GGG | 0.638785 | tig0024470:+50862 | Msa1417370:CDS |
| AAGGGAGACCATGTTGCATG+TGG | 0.654396 | tig0024470:+50924 | Msa1417370:CDS |
| GTGTATTGAAAACCAACAGT+TGG | 0.696651 | tig0024470:+50365 | Msa1417370:CDS |
| AGGGAGACCATGTTGCATGT+GGG | 0.725483 | tig0024470:+50925 | Msa1417370:CDS |
| TGGATCTAAGAGATCTCACG+AGG | 0.728051 | tig0024470:+51046 | Msa1417370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTCTATAATTATTAC+CGG | + | tig0024470:49786-49805 | Msa1417370:intron | 15.0% |
| !! | TATAGTAAATATATCAATGT+AGG | - | tig0024470:49915-49934 | None:intergenic | 15.0% |
| !! | ATTTACTATATTAAAACTTC+TGG | + | tig0024470:49925-49944 | Msa1417370:intron | 15.0% |
| !! | ATAGATGAAAAAAAGTCAAA+GGG | - | tig0024470:49024-49043 | None:intergenic | 20.0% |
| !!! | AGAAAAAATTCTGAAAATTG+AGG | + | tig0024470:49160-49179 | Msa1417370:intron | 20.0% |
| !! | TTTCAAAGAAAATCATTGTA+AGG | - | tig0024470:50101-50120 | None:intergenic | 20.0% |
| !!! | CCAGAAATTTTAAATACTAA+GGG | - | tig0024470:50241-50260 | None:intergenic | 20.0% |
| !!! | ACCAGAAATTTTAAATACTA+AGG | - | tig0024470:50242-50261 | None:intergenic | 20.0% |
| !! | GAATGTTCAATTTACTTTAA+AGG | + | tig0024470:50950-50969 | Msa1417370:CDS | 20.0% |
| !!! | AATTTACTTTAAAGGAAGAA+TGG | + | tig0024470:50958-50977 | Msa1417370:CDS | 20.0% |
| ! | GAATGGTCATTTATATTTGA+TGG | - | tig0024470:48831-48850 | None:intergenic | 25.0% |
| ! | TGATTATATGATCTCATATC+TGG | + | tig0024470:48977-48996 | Msa1417370:intron | 25.0% |
| ! | GATAGATGAAAAAAAGTCAA+AGG | - | tig0024470:49025-49044 | None:intergenic | 25.0% |
| ! | AAAAGTGATGATCTCAAATT+TGG | - | tig0024470:49088-49107 | None:intergenic | 25.0% |
| !! | GATGTTTGAAATTTGATGTA+TGG | + | tig0024470:49257-49276 | Msa1417370:intron | 25.0% |
| !! | ATAAACAATTGTTTTCACCT+AGG | - | tig0024470:49347-49366 | None:intergenic | 25.0% |
| !! | TCTTTATTGATAATAGGCAT+TGG | - | tig0024470:50038-50057 | None:intergenic | 25.0% |
| !! | TCCAAGTCTTTATTGATAAT+AGG | - | tig0024470:50044-50063 | None:intergenic | 25.0% |
| ! | AGAAAATCATTGTAAGGATA+CGG | - | tig0024470:50095-50114 | None:intergenic | 25.0% |
| !! | CCCTTAGTATTTAAAATTTC+TGG | + | tig0024470:50238-50257 | Msa1417370:intron | 25.0% |
| ! | ACTTAACTTTATATTCTCAG+TGG | + | tig0024470:50330-50349 | Msa1417370:intron | 25.0% |
| ! | CAATAATGAATGTCATAATG+AGG | - | tig0024470:50568-50587 | None:intergenic | 25.0% |
| ! | CTCATTATGACATTCATTAT+TGG | + | tig0024470:50566-50585 | Msa1417370:CDS | 25.0% |
| ! | TTATGACATTCATTATTGGT+TGG | + | tig0024470:50570-50589 | Msa1417370:CDS | 25.0% |
| !! | TATGACATTCATTATTGGTT+GGG | + | tig0024470:50571-50590 | Msa1417370:CDS | 25.0% |
| !! | AGAAGGTTTGTATTATTTCT+TGG | + | tig0024470:50605-50624 | Msa1417370:intron | 25.0% |
| ! | AAAAGGTAAAAAGAAAAGCA+AGG | + | tig0024470:51118-51137 | Msa1417370:CDS | 25.0% |
| GACAAAGAAAGAACAAAACA+TGG | - | tig0024470:48893-48912 | None:intergenic | 30.0% | |
| AAAACTAAGAACAAGAGTGA+TGG | - | tig0024470:48923-48942 | None:intergenic | 30.0% | |
| GAGATCATATAATCATACCT+TGG | - | tig0024470:48972-48991 | None:intergenic | 30.0% | |
| !! | ATCATCACTTTTCTTGACTT+TGG | + | tig0024470:49096-49115 | Msa1417370:intron | 30.0% |
| !! | GGATTGTGTTTTTATGTCTT+AGG | + | tig0024470:49117-49136 | Msa1417370:intron | 30.0% |
| !!! | TCTTAGGCTAGTTTTTGTTT+TGG | + | tig0024470:49133-49152 | Msa1417370:intron | 30.0% |
| TTCAAACATCTACATCTACT+GGG | - | tig0024470:49247-49266 | None:intergenic | 30.0% | |
| TTTCAAACATCTACATCTAC+TGG | - | tig0024470:49248-49267 | None:intergenic | 30.0% | |
| TTATCAAGCTGAATTGATGT+TGG | + | tig0024470:49320-49339 | Msa1417370:intron | 30.0% | |
| TATCAAGCTGAATTGATGTT+GGG | + | tig0024470:49321-49340 | Msa1417370:intron | 30.0% | |
| GAACAAGTTTCTTATTACCA+TGG | - | tig0024470:49417-49436 | None:intergenic | 30.0% | |
| GACTTATTTGCATAGAACTA+TGG | + | tig0024470:49471-49490 | Msa1417370:intron | 30.0% | |
| ! | TTTAGTATTTTACAGTCGAG+TGG | + | tig0024470:49494-49513 | Msa1417370:intron | 30.0% |
| TCTATAATTATTACCGGTGT+CGG | + | tig0024470:49792-49811 | Msa1417370:intron | 30.0% | |
| CTATGCAAATAATCTCAAAC+AGG | - | tig0024470:49882-49901 | None:intergenic | 30.0% | |
| GCCTATTATCAATAAAGACT+TGG | + | tig0024470:50040-50059 | Msa1417370:CDS | 30.0% | |
| AATTGCCTTACAATTTGTGT+CGG | + | tig0024470:50119-50138 | Msa1417370:intron | 30.0% | |
| AGACATTCATTCAATCGAAA+AGG | - | tig0024470:50170-50189 | None:intergenic | 30.0% | |
| ACTTTATATTCTCAGTGGAT+TGG | + | tig0024470:50335-50354 | Msa1417370:intron | 30.0% | |
| TGACATTTCATAGGTTTAAG+AGG | - | tig0024470:50486-50505 | None:intergenic | 30.0% | |
| ! | TCGAACATTTTACATGTTCT+CGG | + | tig0024470:50512-50531 | Msa1417370:intron | 30.0% |
| AATGAATGTCATAATGAGGA+GGG | - | tig0024470:50564-50583 | None:intergenic | 30.0% | |
| TAATGAATGTCATAATGAGG+AGG | - | tig0024470:50565-50584 | None:intergenic | 30.0% | |
| GTTCAATATAGGGAAATTCA+AGG | + | tig0024470:50783-50802 | Msa1417370:CDS | 30.0% | |
| ATAGAAACTTCTGTGATTCT+TGG | - | tig0024470:50809-50828 | None:intergenic | 30.0% | |
| GGTTGAATTCAAAGAAATCA+AGG | + | tig0024470:51175-51194 | Msa1417370:CDS | 30.0% | |
| ACAATTGAAAGAGTTCATCT+TGG | + | tig0024470:51211-51230 | Msa1417370:CDS | 30.0% | |
| !!! | TTTCCAACAACTCTTTTTTC+CGG | - | tig0024470:51310-51329 | None:intergenic | 30.0% |
| AAAAGAGTTGTTGGAAAAGT+TGG | + | tig0024470:51313-51332 | Msa1417370:CDS | 30.0% | |
| ACCATTCTTGCTTTACTATG+TGG | + | tig0024470:48844-48863 | Msa1417370:five_prime_UTR | 35.0% | |
| TACTATGTGGCAAATGTGAA+TGG | + | tig0024470:48857-48876 | Msa1417370:five_prime_UTR | 35.0% | |
| ACTATGTGGCAAATGTGAAT+GGG | + | tig0024470:48858-48877 | Msa1417370:five_prime_UTR | 35.0% | |
| ! | GTTTTCTGAGTCAACAGTTT+AGG | + | tig0024470:49186-49205 | Msa1417370:intron | 35.0% |
| ATTATGCTGCTCAAGTAACT+AGG | - | tig0024470:49393-49412 | None:intergenic | 35.0% | |
| AATCCAGGATTAAGATATGC+AGG | - | tig0024470:49963-49982 | None:intergenic | 35.0% | |
| ACTTGATTATTCTGCAATCC+AGG | - | tig0024470:49978-49997 | None:intergenic | 35.0% | |
| !! | AATCAAGTGTTGCTTTGAGT+TGG | + | tig0024470:49990-50009 | Msa1417370:five_prime_UTR | 35.0% |
| !! | GATAATAGGCATTGGCTTTA+TGG | - | tig0024470:50030-50049 | None:intergenic | 35.0% |
| ! | GACCTAATGCAAGTTGAATT+AGG | - | tig0024470:50145-50164 | None:intergenic | 35.0% |
| GTGTATTGAAAACCAACAGT+TGG | + | tig0024470:50365-50384 | Msa1417370:CDS | 35.0% | |
| ATAGGTTTAAGAGGATCAAC+AGG | - | tig0024470:50477-50496 | None:intergenic | 35.0% | |
| CGAGATCAATGACATTTCAT+AGG | - | tig0024470:50495-50514 | None:intergenic | 35.0% | |
| ! | TTTTACATGTTCTCGGAAAC+AGG | + | tig0024470:50519-50538 | Msa1417370:intron | 35.0% |
| TTGGTTTACTATCTTGCTTG+TGG | + | tig0024470:50624-50643 | Msa1417370:intron | 35.0% | |
| ! | GTGCTGATCATGATCTTTAA+TGG | - | tig0024470:50673-50692 | None:intergenic | 35.0% |
| CCTTCAATGGGTATTAAACA+AGG | - | tig0024470:50843-50862 | None:intergenic | 35.0% | |
| ! | CCTTGTTTAATACCCATTGA+AGG | + | tig0024470:50840-50859 | Msa1417370:CDS | 35.0% |
| GAAGTAAACACTCCTTCAAT+GGG | - | tig0024470:50855-50874 | None:intergenic | 35.0% | |
| TGAAGTAAACACTCCTTCAA+TGG | - | tig0024470:50856-50875 | None:intergenic | 35.0% | |
| GAGTGTTTACTTCAAAGCAA+GGG | + | tig0024470:50862-50881 | Msa1417370:CDS | 35.0% | |
| TCAAAGCAAGGGAATTTGAA+TGG | + | tig0024470:50873-50892 | Msa1417370:CDS | 35.0% | |
| AGTCAAATAGGAGGAAATGT+TGG | + | tig0024470:51011-51030 | Msa1417370:CDS | 35.0% | |
| GTCAAATAGGAGGAAATGTT+GGG | + | tig0024470:51012-51031 | Msa1417370:CDS | 35.0% | |
| GCCACATAGTAAAGCAAGAA+TGG | - | tig0024470:48848-48867 | None:intergenic | 40.0% | |
| GGTTCAACAGAAAACTGAGA+AGG | - | tig0024470:48951-48970 | None:intergenic | 40.0% | |
| ! | CTCAGTTTTCTGTTGAACCA+AGG | + | tig0024470:48952-48971 | Msa1417370:five_prime_UTR | 40.0% |
| ! | CAACAGTTTAGGTTTCTTGC+TGG | + | tig0024470:49197-49216 | Msa1417370:intron | 40.0% |
| TCTACATCTACTGGGAAAGT+GGG | - | tig0024470:49239-49258 | None:intergenic | 40.0% | |
| ATCTACATCTACTGGGAAAG+TGG | - | tig0024470:49240-49259 | None:intergenic | 40.0% | |
| !! | GAAGAGTGTTGCAATTCACA+TGG | + | tig0024470:49293-49312 | Msa1417370:intron | 40.0% |
| CTTCTAATTGAAGACGTGTC+TGG | - | tig0024470:49681-49700 | None:intergenic | 40.0% | |
| !! | AAGTGTCGATGCTATAGAGA+CGG | + | tig0024470:49698-49717 | Msa1417370:intron | 40.0% |
| TGTCAACGTGTATTGTACAC+CGG | - | tig0024470:49746-49765 | None:intergenic | 40.0% | |
| GTGTTAGTGTCTATGAGACA+TGG | - | tig0024470:49839-49858 | None:intergenic | 40.0% | |
| TAGCCTGCATATCTTAATCC+TGG | + | tig0024470:49957-49976 | Msa1417370:intron | 40.0% | |
| TTAGGCCGACACAAATTGTA+AGG | - | tig0024470:50127-50146 | None:intergenic | 40.0% | |
| GGCCTAATTCAACTTGCATT+AGG | + | tig0024470:50140-50159 | Msa1417370:intron | 40.0% | |
| GACCTTCGAAAATTCTATGC+CGG | + | tig0024470:50405-50424 | Msa1417370:CDS | 40.0% | |
| ! | TTCCGGCATAGAATTTTCGA+AGG | - | tig0024470:50410-50429 | None:intergenic | 40.0% |
| CAGAACTATGTATGCACTTC+CGG | - | tig0024470:50427-50446 | None:intergenic | 40.0% | |
| !!! | TAATGAGGAGGGCCATTTTT+GGG | - | tig0024470:50553-50572 | None:intergenic | 40.0% |
| !! | ATAATGAGGAGGGCCATTTT+TGG | - | tig0024470:50554-50573 | None:intergenic | 40.0% |
| GTTGGGAAATGACACAAAGA+AGG | + | tig0024470:50588-50607 | Msa1417370:CDS | 40.0% | |
| ! | TCATGATCAGCACTTTTCAC+CGG | + | tig0024470:50680-50699 | Msa1417370:intron | 40.0% |
| ACCTGCAAATACATAACTCC+CGG | - | tig0024470:50702-50721 | None:intergenic | 40.0% | |
| ! | ATCAGACAAAGCACTTGAGT+TGG | + | tig0024470:50737-50756 | Msa1417370:CDS | 40.0% |
| ATCGTGCAGCGTTCAATATA+GGG | + | tig0024470:50773-50792 | Msa1417370:CDS | 40.0% | |
| ! | GGAGTGTTTACTTCAAAGCA+AGG | + | tig0024470:50861-50880 | Msa1417370:CDS | 40.0% |
| TACCATAACGTGGTTGATCA+CGG | - | tig0024470:50992-51011 | None:intergenic | 40.0% | |
| CCTATTTGACTACCATAACG+TGG | - | tig0024470:51002-51021 | None:intergenic | 40.0% | |
| CCACGTTATGGTAGTCAAAT+AGG | + | tig0024470:50999-51018 | Msa1417370:CDS | 40.0% | |
| CGTTATGGTAGTCAAATAGG+AGG | + | tig0024470:51002-51021 | Msa1417370:CDS | 40.0% | |
| AGGGAGGCAGCTAAAAAAAA+AGG | + | tig0024470:51101-51120 | Msa1417370:CDS | 40.0% | |
| TGACCGGAAAAAAGAGTTGT+TGG | + | tig0024470:51304-51323 | Msa1417370:CDS | 40.0% | |
| GCTGCTCAAGTAACTAGGAA+GGG | - | tig0024470:49388-49407 | None:intergenic | 45.0% | |
| TGCTGCTCAAGTAACTAGGA+AGG | - | tig0024470:49389-49408 | None:intergenic | 45.0% | |
| ACTTGAGCAGCATAATGCCA+TGG | + | tig0024470:49397-49416 | Msa1417370:intron | 45.0% | |
| TGTGTGTGTCAGTGCTTCAT+AGG | - | tig0024470:49561-49580 | None:intergenic | 45.0% | |
| TGTCAGTGTCGTGTTAGTGT+CGG | + | tig0024470:49635-49654 | Msa1417370:intron | 45.0% | |
| TGTCGGACATTGACACATGT+TGG | + | tig0024470:49652-49671 | Msa1417370:intron | 45.0% | |
| CTTCTGACTGAAGTTGTGTC+CGG | + | tig0024470:49724-49743 | Msa1417370:intron | 45.0% | |
| TGTCTATGAGACATGGACAC+CGG | - | tig0024470:49832-49851 | None:intergenic | 45.0% | |
| !! | CAAGTGTTGCTTTGAGTTGG+TGG | + | tig0024470:49993-50012 | Msa1417370:five_prime_UTR | 45.0% |
| GATCCTGCATTTCAAACTGC+AGG | + | tig0024470:50062-50081 | Msa1417370:CDS | 45.0% | |
| !! | TTCTCAGTGGATTGGAAGTC+TGG | + | tig0024470:50343-50362 | Msa1417370:intron | 45.0% |
| TACATGTTCTCGGAAACAGG+CGG | + | tig0024470:50522-50541 | Msa1417370:intron | 45.0% | |
| ! | CAGGCGGTTTTTCCCAAAAA+TGG | + | tig0024470:50538-50557 | Msa1417370:intron | 45.0% |
| ! | CATGATCAGCACTTTTCACC+GGG | + | tig0024470:50681-50700 | Msa1417370:intron | 45.0% |
| ACCGGGAGTTATGTATTTGC+AGG | + | tig0024470:50698-50717 | Msa1417370:intron | 45.0% | |
| GGGAGTTATGTATTTGCAGG+TGG | + | tig0024470:50701-50720 | Msa1417370:intron | 45.0% | |
| ! | TTTGCAGGTGGATTCAAGCT+TGG | + | tig0024470:50713-50732 | Msa1417370:intron | 45.0% |
| GATCGTGCAGCGTTCAATAT+AGG | + | tig0024470:50772-50791 | Msa1417370:CDS | 45.0% | |
| TACATGTGTACAGGCTGACT+TGG | - | tig0024470:50905-50924 | None:intergenic | 45.0% | |
| AGTCAGCCTGTACACATGTA+AGG | + | tig0024470:50905-50924 | Msa1417370:CDS | 45.0% | |
| GTCAGCCTGTACACATGTAA+GGG | + | tig0024470:50906-50925 | Msa1417370:CDS | 45.0% | |
| CATTCTTCCCACATGCAACA+TGG | - | tig0024470:50935-50954 | None:intergenic | 45.0% | |
| ATAGGAGGAAATGTTGGGTC+AGG | + | tig0024470:51017-51036 | Msa1417370:CDS | 45.0% | |
| AATGTTGGGTCAGGAAGTAG+TGG | + | tig0024470:51026-51045 | Msa1417370:CDS | 45.0% | |
| TGGATCTAAGAGATCTCACG+AGG | + | tig0024470:51046-51065 | Msa1417370:CDS | 45.0% | |
| TAGTGCTCGTCCAATAGGTA+GGG | + | tig0024470:51082-51101 | Msa1417370:CDS | 45.0% | |
| ! | AGAGTTCATCTTGGTGCAAC+AGG | + | tig0024470:51220-51239 | Msa1417370:CDS | 45.0% |
| GCTGAATTGATGTTGGGCCT+AGG | + | tig0024470:49327-49346 | Msa1417370:intron | 50.0% | |
| ! | ACCGATTCCAATCCGTAGCA+CGG | + | tig0024470:49532-49551 | Msa1417370:intron | 50.0% |
| !! | TCCGTGCTACGGATTGGAAT+CGG | - | tig0024470:49536-49555 | None:intergenic | 50.0% |
| CTTCATAGGTGTCCGTGCTA+CGG | - | tig0024470:49547-49566 | None:intergenic | 50.0% | |
| TGACACACACACATCGACGA+TGG | + | tig0024470:49570-49589 | Msa1417370:intron | 50.0% | |
| ! | GCTCCTGCAGTTTGAAATGC+AGG | - | tig0024470:50068-50087 | None:intergenic | 50.0% |
| !! | CTTGAGTTGGATGCAGCCTT+AGG | + | tig0024470:50750-50769 | Msa1417370:CDS | 50.0% |
| TTGAACGCTGCACGATCCTA+AGG | - | tig0024470:50769-50788 | None:intergenic | 50.0% | |
| GGTCTCCCTTACATGTGTAC+AGG | - | tig0024470:50914-50933 | None:intergenic | 50.0% | |
| AAGGGAGACCATGTTGCATG+TGG | + | tig0024470:50924-50943 | Msa1417370:CDS | 50.0% | |
| AGGGAGACCATGTTGCATGT+GGG | + | tig0024470:50925-50944 | Msa1417370:CDS | 50.0% | |
| CTCCGTGATCAACCACGTTA+TGG | + | tig0024470:50987-51006 | Msa1417370:CDS | 50.0% | |
| AGATCTCACGAGGACTCTGT+AGG | + | tig0024470:51056-51075 | Msa1417370:CDS | 50.0% | |
| GGATCTAGTGCTCGTCCAAT+AGG | + | tig0024470:51077-51096 | Msa1417370:CDS | 50.0% | |
| CTAGTGCTCGTCCAATAGGT+AGG | + | tig0024470:51081-51100 | Msa1417370:CDS | 50.0% | |
| TTAGCTGCCTCCCTACCTAT+TGG | - | tig0024470:51095-51114 | None:intergenic | 50.0% | |
| TAGGTGTCCGTGCTACGGAT+TGG | - | tig0024470:49542-49561 | None:intergenic | 55.0% | |
| CTGACACTGGCACCAACTGT+TGG | - | tig0024470:50380-50399 | None:intergenic | 55.0% | |
| CGAAGGTCTGACTCTGACAC+TGG | - | tig0024470:50393-50412 | None:intergenic | 55.0% | |
| TGCTCGTCCAATAGGTAGGG+AGG | + | tig0024470:51085-51104 | Msa1417370:CDS | 55.0% | |
| AAGCAAGGATGCTGCTGCCT+TGG | + | tig0024470:51133-51152 | Msa1417370:CDS | 55.0% | |
| TGCCTTGGAGGAGGTGGAAA+AGG | + | tig0024470:51148-51167 | Msa1417370:CDS | 55.0% | |
| ! | CTCCTTTTCCACCTCCTCCA+AGG | - | tig0024470:51153-51172 | None:intergenic | 55.0% |
| TGGAGGAGGTGGAAAAGGAG+TGG | + | tig0024470:51153-51172 | Msa1417370:CDS | 55.0% | |
| GGAGGAGGTGGAAAAGGAGT+GGG | + | tig0024470:51154-51173 | Msa1417370:CDS | 55.0% | |
| CCGGTCATCGAGATGCTCTT+CGG | - | tig0024470:51291-51310 | None:intergenic | 55.0% | |
| !! | CCGAAGAGCATCTCGATGAC+CGG | + | tig0024470:51288-51307 | Msa1417370:CDS | 55.0% |
| CACGACAAACACGCCGACAC+CGG | - | tig0024470:49808-49827 | None:intergenic | 60.0% | |
| GTCGGCGTGTTTGTCGTGTC+CGG | + | tig0024470:49810-49829 | Msa1417370:intron | 60.0% | |
| CAAGGATGCTGCTGCCTTGG+AGG | + | tig0024470:51136-51155 | Msa1417370:CDS | 60.0% | |
| GGATGCTGCTGCCTTGGAGG+AGG | + | tig0024470:51139-51158 | Msa1417370:CDS | 65.0% | |
| TGCTGCTGCCTTGGAGGAGG+TGG | + | tig0024470:51142-51161 | Msa1417370:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024470 | gene | 48814 | 51352 | 48814 | ID=Msa1417370;Name=Msa1417370 |
| tig0024470 | mRNA | 48814 | 51352 | 48814 | ID=Msa1417370-mRNA-1;Parent=Msa1417370;Name=Msa1417370-mRNA-1;_AED=0.63;_eAED=0.63;_QI=219|1|0.8|1|0.75|0.6|5|0|285 |
| tig0024470 | exon | 48814 | 48973 | 48814 | ID=Msa1417370-mRNA-1:exon:23378;Parent=Msa1417370-mRNA-1 |
| tig0024470 | exon | 49979 | 50093 | 49979 | ID=Msa1417370-mRNA-1:exon:23379;Parent=Msa1417370-mRNA-1 |
| tig0024470 | exon | 50350 | 50449 | 50350 | ID=Msa1417370-mRNA-1:exon:23380;Parent=Msa1417370-mRNA-1 |
| tig0024470 | exon | 50541 | 50609 | 50541 | ID=Msa1417370-mRNA-1:exon:23381;Parent=Msa1417370-mRNA-1 |
| tig0024470 | exon | 50720 | 51352 | 50720 | ID=Msa1417370-mRNA-1:exon:23382;Parent=Msa1417370-mRNA-1 |
| tig0024470 | five_prime_UTR | 48814 | 48973 | 48814 | ID=Msa1417370-mRNA-1:five_prime_utr;Parent=Msa1417370-mRNA-1 |
| tig0024470 | five_prime_UTR | 49979 | 50037 | 49979 | ID=Msa1417370-mRNA-1:five_prime_utr;Parent=Msa1417370-mRNA-1 |
| tig0024470 | CDS | 50038 | 50093 | 50038 | ID=Msa1417370-mRNA-1:cds;Parent=Msa1417370-mRNA-1 |
| tig0024470 | CDS | 50350 | 50449 | 50350 | ID=Msa1417370-mRNA-1:cds;Parent=Msa1417370-mRNA-1 |
| tig0024470 | CDS | 50541 | 50609 | 50541 | ID=Msa1417370-mRNA-1:cds;Parent=Msa1417370-mRNA-1 |
| tig0024470 | CDS | 50720 | 51352 | 50720 | ID=Msa1417370-mRNA-1:cds;Parent=Msa1417370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
