Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214310 | XP_003609194.1 | 97.931 | 290 | 6 | 0 | 83 | 372 | 1 | 290 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214310 | sp|Q0WP96|PGR_ARATH | 65.965 | 285 | 97 | 0 | 88 | 372 | 4 | 288 | 1.79e-130 | 378 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214310 | G7JU49 | 97.931 | 290 | 6 | 0 | 83 | 372 | 1 | 290 | 0.0 | 574 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033220 | Msa1214310 | 0.815918 | 7.226755e-52 | -8.615850e-47 |
| Msa0079880 | Msa1214310 | 0.803349 | 3.637157e-49 | -8.615850e-47 |
| Msa0657710 | Msa1214310 | 0.826628 | 2.443411e-54 | -8.615850e-47 |
| Msa0657720 | Msa1214310 | 0.813471 | 2.516965e-51 | -8.615850e-47 |
| Msa0702790 | Msa1214310 | 0.808142 | 3.582163e-50 | -8.615850e-47 |
| Msa0702800 | Msa1214310 | 0.815188 | 1.050853e-51 | -8.615850e-47 |
| Msa0722890 | Msa1214310 | 0.838857 | 2.240917e-57 | -8.615850e-47 |
| Msa0723090 | Msa1214310 | 0.850613 | 1.515948e-60 | -8.615850e-47 |
| Msa0731590 | Msa1214310 | 0.805324 | 1.410257e-49 | -8.615850e-47 |
| Msa0771790 | Msa1214310 | 0.824528 | 7.689187e-54 | -8.615850e-47 |
| Msa0828950 | Msa1214310 | 0.807631 | 4.599560e-50 | -8.615850e-47 |
| Msa0828960 | Msa1214310 | 0.822283 | 2.573673e-53 | -8.615850e-47 |
| Msa0134780 | Msa1214310 | 0.842024 | 3.327345e-58 | -8.615850e-47 |
| Msa0134880 | Msa1214310 | 0.808479 | 3.035380e-50 | -8.615850e-47 |
| Msa0179700 | Msa1214310 | 0.819955 | 8.848244e-53 | -8.615850e-47 |
| Msa0365210 | Msa1214310 | 0.817325 | 3.495789e-52 | -8.615850e-47 |
| Msa0457570 | Msa1214310 | 0.825191 | 5.362621e-54 | -8.615850e-47 |
| Msa1044250 | Msa1214310 | 0.811686 | 6.183135e-51 | -8.615850e-47 |
| Msa1068960 | Msa1214310 | 0.805325 | 1.409753e-49 | -8.615850e-47 |
| Msa1106590 | Msa1214310 | 0.825413 | 4.751188e-54 | -8.615850e-47 |
| Msa0284800 | Msa1214310 | 0.821520 | 3.865620e-53 | -8.615850e-47 |
| Msa0313900 | Msa1214310 | 0.804972 | 1.671415e-49 | -8.615850e-47 |
| Msa0330520 | Msa1214310 | 0.810843 | 9.420250e-51 | -8.615850e-47 |
| Msa1149910 | Msa1214310 | 0.818390 | 2.009409e-52 | -8.615850e-47 |
| Msa1160520 | Msa1214310 | 0.813116 | 3.012427e-51 | -8.615850e-47 |
| Msa1179290 | Msa1214310 | 0.807537 | 4.816031e-50 | -8.615850e-47 |
| Msa1214310 | Msa1261160 | 0.894259 | 2.916462e-75 | -8.615850e-47 |
| Msa1214310 | Msa1300420 | 0.913498 | 5.739823e-84 | -8.615850e-47 |
| Msa1214310 | Msa1407810 | 0.807641 | 4.578075e-50 | -8.615850e-47 |
| Msa1214310 | Msa1417370 | 0.819010 | 1.453268e-52 | -8.615850e-47 |
| Msa1214310 | Msa1433360 | 0.833583 | 4.908082e-56 | -8.615850e-47 |
| Msa1214310 | Msa1437780 | 0.807435 | 5.061198e-50 | -8.615850e-47 |
| Msa0560060 | Msa1214310 | 0.802937 | 4.425134e-49 | -8.615850e-47 |
| Msa0567330 | Msa1214310 | 0.803996 | 2.670240e-49 | -8.615850e-47 |
| Msa0567570 | Msa1214310 | 0.800729 | 1.257343e-48 | -8.615850e-47 |
| Msa0843240 | Msa1214310 | 0.801674 | 8.054578e-49 | -8.615850e-47 |
| Msa0848910 | Msa1214310 | 0.807593 | 4.685950e-50 | -8.615850e-47 |
| Msa0876930 | Msa1214310 | 0.812486 | 4.137857e-51 | -8.615850e-47 |
| Msa0876940 | Msa1214310 | 0.824855 | 6.436541e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214310 | MtrunA17_Chr4g0062841 | 97.931 | 290 | 6 | 0 | 83 | 372 | 1 | 290 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214310 | AT5G19930.1 | 65.965 | 285 | 97 | 0 | 88 | 372 | 4 | 288 | 1.82e-131 | 378 |
| Msa1214310 | AT5G19930.2 | 65.965 | 285 | 97 | 0 | 88 | 372 | 4 | 288 | 1.82e-131 | 378 |
Find 100 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTCTGATTGTAGCTTTA+TGG | 0.071257 | 8_1:-74823304 | Msa1214310:CDS |
| AAAGAGAAGAATAATAATTT+TGG | 0.190946 | 8_1:-74824707 | Msa1214310:CDS |
| TTTGAGTGAGTTTCCGAAAT+TGG | 0.205361 | 8_1:+74824503 | None:intergenic |
| TTTATATTTGTATCTTAAAA+AGG | 0.218807 | 8_1:+74821529 | None:intergenic |
| AAAATTATTATTCTTCTCTT+TGG | 0.231956 | 8_1:+74824709 | None:intergenic |
| TGTTCTGATTGTAGCTTTAT+GGG | 0.234865 | 8_1:-74823303 | Msa1214310:CDS |
| TCTTATTCTCGTTATAATAT+TGG | 0.236545 | 8_1:+74824647 | None:intergenic |
| GCTCTCATTGGTGGTGTTAT+TGG | 0.255394 | 8_1:-74823224 | Msa1214310:CDS |
| TTAATTCTTGTATCCATATC+TGG | 0.256445 | 8_1:-74821632 | Msa1214310:three_prime_UTR |
| CGTGTTCCTCGTTGCCTATT+CGG | 0.276192 | 8_1:-74824682 | Msa1214310:CDS |
| TGTCCACCTTGTTTGAATTC+AGG | 0.279090 | 8_1:+74824147 | None:intergenic |
| AAAGGAGGAAGCCAAATAAA+AGG | 0.279137 | 8_1:-74821676 | Msa1214310:three_prime_UTR |
| AGCACTTCTGGTGCACTTGC+TGG | 0.299865 | 8_1:-74824388 | Msa1214310:CDS |
| GTGAGCTCTGAATGCGATTA+AGG | 0.301312 | 8_1:+74824426 | None:intergenic |
| CTTTCAAAGACTTGCTTGAT+AGG | 0.309268 | 8_1:+74821695 | None:intergenic |
| GAGAATTCAAAATTTGTAAT+CGG | 0.352971 | 8_1:-74821738 | Msa1214310:three_prime_UTR |
| CCCTCTATGTTGTAGGTTGT+TGG | 0.355656 | 8_1:-74821924 | Msa1214310:intron |
| TCATTTCTGAAACCCAATTT+CGG | 0.364843 | 8_1:-74824516 | Msa1214310:CDS |
| TCCTCGTTGCCTATTCGGTT+TGG | 0.372588 | 8_1:-74824677 | Msa1214310:CDS |
| CGGATCCACTGAGAAATAGA+TGG | 0.376312 | 8_1:+74824475 | None:intergenic |
| CTCCATTGCAGCAGCAATAA+TGG | 0.378209 | 8_1:+74823201 | None:intergenic |
| TTGAGTGAGTTTCCGAAATT+GGG | 0.382190 | 8_1:+74824504 | None:intergenic |
| GGCGCAACATTGCAATTTAG+TGG | 0.386948 | 8_1:-74822059 | Msa1214310:CDS |
| TTAATAACATGATGTGAGTT+TGG | 0.388697 | 8_1:+74824616 | None:intergenic |
| GGTTGCATTCCAAACCGAAT+AGG | 0.409105 | 8_1:+74824668 | None:intergenic |
| TGACGATGCATGGCATTGTT+AGG | 0.409749 | 8_1:-74821494 | Msa1214310:three_prime_UTR |
| AACAGAGGCAATGCCACTAT+TGG | 0.410928 | 8_1:+74823322 | None:intergenic |
| AAGTATCATTGACTCTCTAT+TGG | 0.411402 | 8_1:-74822081 | Msa1214310:CDS |
| AACAAGGTGGACAACGAAAC+TGG | 0.413804 | 8_1:-74824137 | Msa1214310:intron |
| TAGAATTCTCAAGCAACTAT+TGG | 0.422184 | 8_1:-74822138 | Msa1214310:CDS |
| AAAGAGGTTATTCACCTTGA+AGG | 0.422918 | 8_1:+74823121 | None:intergenic |
| TAGAGCAGAATAATAAAGTA+TGG | 0.431621 | 8_1:-74824746 | None:intergenic |
| TGTAATCGGATGATAGAATA+GGG | 0.439571 | 8_1:-74821724 | Msa1214310:three_prime_UTR |
| GACACATGGTCTTCTGAGCT+TGG | 0.442992 | 8_1:-74823179 | Msa1214310:CDS |
| TTGTAATCGGATGATAGAAT+AGG | 0.443653 | 8_1:-74821725 | Msa1214310:three_prime_UTR |
| TTGTAGGTTGTTGGAAATCC+AGG | 0.453453 | 8_1:-74821915 | Msa1214310:intron |
| GATAGAACTAGAACCAGATA+TGG | 0.455391 | 8_1:+74821619 | None:intergenic |
| CCACTCCACCTCGTGGTAGT+TGG | 0.455444 | 8_1:-74824583 | Msa1214310:CDS |
| AGTATCATTGACTCTCTATT+GGG | 0.459444 | 8_1:-74822080 | Msa1214310:CDS |
| GCCAAATAAAAGGGCAGCAT+AGG | 0.463670 | 8_1:-74821666 | Msa1214310:three_prime_UTR |
| ATTTCGGAAACTCACTCAAA+TGG | 0.468503 | 8_1:-74824500 | Msa1214310:CDS |
| TTCTCAGTGGATCCGACCAT+TGG | 0.469540 | 8_1:-74824467 | Msa1214310:CDS |
| GCAGCTGGTGGAAGTGTCAT+TGG | 0.473800 | 8_1:-74822209 | Msa1214310:CDS |
| TCGTCTAATCACAACCTTCA+AGG | 0.476556 | 8_1:-74823135 | Msa1214310:intron |
| GCTCTAATTACCGCTCTCAT+TGG | 0.488116 | 8_1:-74823236 | Msa1214310:CDS |
| GGACTTCTAGCAGCTGCAGC+TGG | 0.498554 | 8_1:-74822224 | Msa1214310:CDS |
| CCATTGGTTGCTGTCACTGT+TGG | 0.504140 | 8_1:-74824451 | Msa1214310:CDS |
| TACAAATATAAAACATGAAG+AGG | 0.505675 | 8_1:-74821518 | Msa1214310:three_prime_UTR |
| TAACATGATGTGAGTTTGGT+TGG | 0.516511 | 8_1:+74824620 | None:intergenic |
| ATACCCCTCACTACCGTGGC+AGG | 0.517394 | 8_1:-74822113 | Msa1214310:CDS |
| ATACAAGTTCTGGCCAATAG+TGG | 0.522110 | 8_1:-74823335 | Msa1214310:CDS |
| CCTGTGAGGAAGGGTACAAA+TGG | 0.528132 | 8_1:-74822263 | Msa1214310:CDS |
| CTAATTACCGCTCTCATTGG+TGG | 0.531975 | 8_1:-74823233 | Msa1214310:CDS |
| GGCCATTATTGCTGCTGCAA+TGG | 0.538240 | 8_1:-74823203 | Msa1214310:CDS |
| CAAAGATGTCACTCTAATGT+TGG | 0.539550 | 8_1:+74821566 | None:intergenic |
| CCAAATAAAAGGGCAGCATA+GGG | 0.544842 | 8_1:-74821665 | Msa1214310:three_prime_UTR |
| CCATTTGTACCCTTCCTCAC+AGG | 0.544901 | 8_1:+74822263 | None:intergenic |
| AAGGAGGAAGCCAAATAAAA+GGG | 0.546018 | 8_1:-74821675 | Msa1214310:three_prime_UTR |
| TCAAAGACTTGCTTGATAGG+AGG | 0.552779 | 8_1:+74821698 | None:intergenic |
| CTTCTAGCAGCTGCAGCTGG+TGG | 0.554176 | 8_1:-74822221 | Msa1214310:CDS |
| ATGAAGAGGATGACGATGCA+TGG | 0.569749 | 8_1:-74821504 | Msa1214310:three_prime_UTR |
| TACCACGAGGTGGAGTGGAA+TGG | 0.569946 | 8_1:+74824588 | None:intergenic |
| GCTTTATGGGTACTAACAGA+AGG | 0.570914 | 8_1:-74823290 | Msa1214310:CDS |
| ATAGTCCTGCCACGGTAGTG+AGG | 0.574585 | 8_1:+74822108 | None:intergenic |
| CTATCAAGCAAGTCTTTGAA+AGG | 0.585227 | 8_1:-74821694 | Msa1214310:three_prime_UTR |
| ACTACCGTGGCAGGACTATG+TGG | 0.586247 | 8_1:-74822104 | Msa1214310:CDS |
| TTGGAGTTCTCAGTAATGAT+CGG | 0.586787 | 8_1:-74823160 | Msa1214310:CDS |
| ATGGGTACTAACAGAAGGGA+AGG | 0.594387 | 8_1:-74823285 | Msa1214310:CDS |
| TAGTCCTGCCACGGTAGTGA+GGG | 0.595711 | 8_1:+74822109 | None:intergenic |
| TAATCGCATTCAGAGCTCAC+AGG | 0.596274 | 8_1:-74824423 | Msa1214310:CDS |
| CCAACTACCACGAGGTGGAG+TGG | 0.600830 | 8_1:+74824583 | None:intergenic |
| ATTCTGCTCTATTCGCCAGA+AGG | 0.615062 | 8_1:-74822036 | Msa1214310:intron |
| GTGCATGAACTCTAAAGACT+CGG | 0.615281 | 8_1:-74823258 | Msa1214310:CDS |
| TCAAGCAAGTCTTTGAAAGG+AGG | 0.616780 | 8_1:-74821691 | Msa1214310:three_prime_UTR |
| CAAGTGCACCAGAAGTGCTG+AGG | 0.620284 | 8_1:+74824392 | None:intergenic |
| GGATCCACTGAGAAATAGAT+GGG | 0.623325 | 8_1:+74824476 | None:intergenic |
| AAGTGCACCAGAAGTGCTGA+GGG | 0.630378 | 8_1:+74824393 | None:intergenic |
| CTTTATGGGTACTAACAGAA+GGG | 0.631113 | 8_1:-74823289 | Msa1214310:CDS |
| AGCGACTGAAGTTAAAATTG+TGG | 0.631604 | 8_1:+74821818 | None:intergenic |
| TTGAAGGTTGTGATTAGACG+AGG | 0.644573 | 8_1:+74823137 | None:intergenic |
| ATTGATCCTGAATTCAAACA+AGG | 0.648969 | 8_1:-74824153 | Msa1214310:CDS |
| CAGTGACAGCAACCAATGGT+CGG | 0.652095 | 8_1:+74824455 | None:intergenic |
| CCAACAGTGACAGCAACCAA+TGG | 0.662526 | 8_1:+74824451 | None:intergenic |
| TCTACTTTCGAAATCTACAC+AGG | 0.665934 | 8_1:+74821594 | None:intergenic |
| AGTCCTGCCACGGTAGTGAG+GGG | 0.669040 | 8_1:+74822110 | None:intergenic |
| TTCCATTCCACTCCACCTCG+TGG | 0.671355 | 8_1:-74824590 | Msa1214310:CDS |
| GATACAAGAATTAAATCACA+AGG | 0.675604 | 8_1:+74821641 | None:intergenic |
| ACTTCCACATAGTCCTGCCA+CGG | 0.681568 | 8_1:+74822100 | None:intergenic |
| AACAACCAACTACCACGAGG+TGG | 0.685328 | 8_1:+74824578 | None:intergenic |
| GATCCTGAATTCAAACAAGG+TGG | 0.686429 | 8_1:-74824150 | Msa1214310:CDS |
| AATAACACCACCAATGAGAG+CGG | 0.688307 | 8_1:+74823226 | None:intergenic |
| TAAAGCTACAATCAGAACAG+AGG | 0.688389 | 8_1:+74823307 | None:intergenic |
| AAAAGGGACAAGATACGAAG+CGG | 0.694625 | 8_1:-74824179 | Msa1214310:CDS |
| GGTCATACCCCTCACTACCG+TGG | 0.698974 | 8_1:-74822117 | Msa1214310:CDS |
| GTGAGGAAGGGTACAAATGG+TGG | 0.703389 | 8_1:-74822260 | Msa1214310:CDS |
| ATACAAGAATTAAATCACAA+GGG | 0.705522 | 8_1:+74821642 | None:intergenic |
| TGGACCCATCTATTTCTCAG+TGG | 0.712343 | 8_1:-74824480 | Msa1214310:CDS |
| GCTGCTGCAATGGAGACACA+TGG | 0.733987 | 8_1:-74823193 | Msa1214310:CDS |
| TCCAAACCGAATAGGCAACG+AGG | 0.761278 | 8_1:+74824676 | None:intergenic |
| AAGAACAACCAACTACCACG+AGG | 0.800597 | 8_1:+74824575 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATAATCAATATTAC+AGG | - | chr8_1:74822509-74822528 | Msa1214310:intron | 10.0% |
| !! | TTTATATTTGTATCTTAAAA+AGG | + | chr8_1:74824684-74824703 | None:intergenic | 10.0% |
| !! | AAAATTATTATTCTTCTCTT+TGG | + | chr8_1:74821504-74821523 | None:intergenic | 15.0% |
| !!! | AAAGAGAAGAATAATAATTT+TGG | - | chr8_1:74821503-74821522 | Msa1214310:three_prime_UTR | 15.0% |
| !!! | AAATCTTTTTTGTTGTTTAA+TGG | - | chr8_1:74821932-74821951 | Msa1214310:intron | 15.0% |
| !!! | TTCGAAATATAATTCTTTTT+TGG | - | chr8_1:74823395-74823414 | Msa1214310:intron | 15.0% |
| !! | TCTTATTCTCGTTATAATAT+TGG | + | chr8_1:74821566-74821585 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAGAGCAAAAAA+GGG | + | chr8_1:74822126-74822145 | None:intergenic | 20.0% |
| !! | TAAAAGAAAAAGAGCAAAAA+AGG | + | chr8_1:74822127-74822146 | None:intergenic | 20.0% |
| !!! | GAGTTTTTTTTACTATAAGA+TGG | - | chr8_1:74822316-74822335 | Msa1214310:intron | 20.0% |
| !!! | TTTTTTGAAAATTCAGTATC+CGG | + | chr8_1:74822438-74822457 | None:intergenic | 20.0% |
| !! | AACGCTAAAAATTCTAATTA+GGG | - | chr8_1:74822609-74822628 | Msa1214310:intron | 20.0% |
| !! | TACATAAAAAAGCTAAAACT+TGG | - | chr8_1:74822686-74822705 | Msa1214310:intron | 20.0% |
| !!! | TAATTGCAACAATTTTCTTT+TGG | - | chr8_1:74822739-74822758 | Msa1214310:intron | 20.0% |
| !! | CTAATTAGTAAATGCAAATT+AGG | + | chr8_1:74823154-74823173 | None:intergenic | 20.0% |
| !!! | CTAATTTGCATTTACTAATT+AGG | - | chr8_1:74823152-74823171 | Msa1214310:CDS | 20.0% |
| !! | AAAACAAAATTGAGAATTTG+TGG | + | chr8_1:74823575-74823594 | None:intergenic | 20.0% |
| !!! | TATTAGTTTTTCACATAAAG+TGG | - | chr8_1:74823699-74823718 | Msa1214310:intron | 20.0% |
| !! | TACATTTGAACAAAATTCAA+TGG | - | chr8_1:74824236-74824255 | Msa1214310:intron | 20.0% |
| !! | GAGAATTCAAAATTTGTAAT+CGG | - | chr8_1:74824472-74824491 | Msa1214310:CDS | 20.0% |
| !! | ATACAAGAATTAAATCACAA+GGG | + | chr8_1:74824571-74824590 | None:intergenic | 20.0% |
| !! | TACAAATATAAAACATGAAG+AGG | - | chr8_1:74824692-74824711 | Msa1214310:CDS | 20.0% |
| ! | TTAATAACATGATGTGAGTT+TGG | + | chr8_1:74821597-74821616 | None:intergenic | 25.0% |
| !! | TCATTCATTCATTTTCAACA+AGG | - | chr8_1:74821959-74821978 | Msa1214310:intron | 25.0% |
| ! | AAAAAAGGGAACATAGAAAA+GGG | + | chr8_1:74822112-74822131 | None:intergenic | 25.0% |
| ! | TAGAATTGATTAAACTTGTG+CGG | - | chr8_1:74822238-74822257 | Msa1214310:CDS | 25.0% |
| !! | TATAACTTGAGGTTAGATTT+TGG | - | chr8_1:74822294-74822313 | Msa1214310:intron | 25.0% |
| ! | TTGGATACATTTATGTAAGT+GGG | + | chr8_1:74822353-74822372 | None:intergenic | 25.0% |
| ! | ACATAAATGTATCCAACAAT+TGG | - | chr8_1:74822357-74822376 | Msa1214310:intron | 25.0% |
| !! | ATAAAACTAAGTTGAACGAA+TGG | + | chr8_1:74822494-74822513 | None:intergenic | 25.0% |
| ! | GAACGCTAAAAATTCTAATT+AGG | - | chr8_1:74822608-74822627 | Msa1214310:intron | 25.0% |
| !!! | ATGGTTTTTTTGTCACATTA+TGG | - | chr8_1:74822801-74822820 | Msa1214310:intron | 25.0% |
| ! | AAATGCAAATTAGGAATAGA+AGG | + | chr8_1:74823145-74823164 | None:intergenic | 25.0% |
| !!! | TTGATGTTCATTAATTTGCT+AGG | - | chr8_1:74823220-74823239 | Msa1214310:CDS | 25.0% |
| ! | AATATTAATCAAAACATCCC+TGG | - | chr8_1:74823255-74823274 | Msa1214310:CDS | 25.0% |
| !! | TCACAGCTTAAATATGTTTT+TGG | - | chr8_1:74823370-74823389 | Msa1214310:intron | 25.0% |
| ! | ATTTGTGGATCCTTTATTAA+GGG | + | chr8_1:74823560-74823579 | None:intergenic | 25.0% |
| ! | AATTTGTGGATCCTTTATTA+AGG | + | chr8_1:74823561-74823580 | None:intergenic | 25.0% |
| ! | AATTAAAAGAACAGAATGTG+AGG | + | chr8_1:74823652-74823671 | None:intergenic | 25.0% |
| ! | CTTATAAGTTATAACATCTG+TGG | - | chr8_1:74823817-74823836 | Msa1214310:intron | 25.0% |
| ! | GATACAAGAATTAAATCACA+AGG | + | chr8_1:74824572-74824591 | None:intergenic | 25.0% |
| ! | TTAATTCTTGTATCCATATC+TGG | - | chr8_1:74824578-74824597 | Msa1214310:CDS | 25.0% |
| !! | TCATTTCTGAAACCCAATTT+CGG | - | chr8_1:74821694-74821713 | Msa1214310:three_prime_UTR | 30.0% |
| ! | TTCACGTTTTTGTTGGATTT+AGG | - | chr8_1:74821862-74821881 | Msa1214310:CDS | 30.0% |
| ! | TTCATTTTCAACAAGGTTTG+CGG | - | chr8_1:74821966-74821985 | Msa1214310:intron | 30.0% |
| ATTGATCCTGAATTCAAACA+AGG | - | chr8_1:74822057-74822076 | Msa1214310:CDS | 30.0% | |
| CAAAAAAGGGAACATAGAAA+AGG | + | chr8_1:74822113-74822132 | None:intergenic | 30.0% | |
| TAGTAGTATAACTCAAGACA+AGG | + | chr8_1:74822155-74822174 | None:intergenic | 30.0% | |
| CTACAATGGAATATAACTTG+AGG | - | chr8_1:74822283-74822302 | Msa1214310:intron | 30.0% | |
| GTTGGATACATTTATGTAAG+TGG | + | chr8_1:74822354-74822373 | None:intergenic | 30.0% | |
| !!! | TTTTTTGTCACATTATGGTG+AGG | - | chr8_1:74822806-74822825 | Msa1214310:intron | 30.0% |
| GGGAAATTTATACCAAATTC+AGG | + | chr8_1:74822839-74822858 | None:intergenic | 30.0% | |
| !!! | ATTTCCCTACTGTTTTTTTC+AGG | - | chr8_1:74822852-74822871 | Msa1214310:intron | 30.0% |
| GTATCCTGAAAAAAACAGTA+GGG | + | chr8_1:74822859-74822878 | None:intergenic | 30.0% | |
| TGTATCCTGAAAAAAACAGT+AGG | + | chr8_1:74822860-74822879 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAGGATACAAGTTC+TGG | - | chr8_1:74822865-74822884 | Msa1214310:intron | 30.0% |
| !! | TGTTCTGATTGTAGCTTTAT+GGG | - | chr8_1:74822907-74822926 | Msa1214310:intron | 30.0% |
| ! | ATGTTGTTGCTTAAACAAAG+AGG | + | chr8_1:74823108-74823127 | None:intergenic | 30.0% |
| ! | TTTCGTAATTTGTGATTGTG+TGG | - | chr8_1:74823424-74823443 | Msa1214310:intron | 30.0% |
| ! | TTCGTAATTTGTGATTGTGT+GGG | - | chr8_1:74823425-74823444 | Msa1214310:intron | 30.0% |
| !! | GTTTTTAAGCTTAAACTGCT+CGG | - | chr8_1:74823590-74823609 | Msa1214310:intron | 30.0% |
| !! | TTTTTAAGCTTAAACTGCTC+GGG | - | chr8_1:74823591-74823610 | Msa1214310:intron | 30.0% |
| TATAACTTATAAGCCACTTG+TGG | + | chr8_1:74823810-74823829 | None:intergenic | 30.0% | |
| !!! | TTCTAGAACTTTTGACAATC+AGG | - | chr8_1:74824038-74824057 | Msa1214310:intron | 30.0% |
| TAGAATTCTCAAGCAACTAT+TGG | - | chr8_1:74824072-74824091 | Msa1214310:intron | 30.0% | |
| !! | AAGTATCATTGACTCTCTAT+TGG | - | chr8_1:74824129-74824148 | Msa1214310:intron | 30.0% |
| !! | AGTATCATTGACTCTCTATT+GGG | - | chr8_1:74824130-74824149 | Msa1214310:intron | 30.0% |
| GTGTATCAAAATTTACCTTC+TGG | + | chr8_1:74824192-74824211 | None:intergenic | 30.0% | |
| ! | GATACACCTTTTTCTCATAT+TGG | - | chr8_1:74824205-74824224 | Msa1214310:CDS | 30.0% |
| GTAATGCCAATATGAGAAAA+AGG | + | chr8_1:74824214-74824233 | None:intergenic | 30.0% | |
| ! | GAGACCTGAAATCTTTTTAA+CGG | + | chr8_1:74824326-74824345 | None:intergenic | 30.0% |
| TTGTAATCGGATGATAGAAT+AGG | - | chr8_1:74824485-74824504 | Msa1214310:CDS | 30.0% | |
| TGTAATCGGATGATAGAATA+GGG | - | chr8_1:74824486-74824505 | Msa1214310:CDS | 30.0% | |
| TAACATGATGTGAGTTTGGT+TGG | + | chr8_1:74821593-74821612 | None:intergenic | 35.0% | |
| TTGAGTGAGTTTCCGAAATT+GGG | + | chr8_1:74821709-74821728 | None:intergenic | 35.0% | |
| TTTGAGTGAGTTTCCGAAAT+TGG | + | chr8_1:74821710-74821729 | None:intergenic | 35.0% | |
| ATTTCGGAAACTCACTCAAA+TGG | - | chr8_1:74821710-74821729 | Msa1214310:three_prime_UTR | 35.0% | |
| ! | ATGTCTCTTCACGTTTTTGT+TGG | - | chr8_1:74821855-74821874 | Msa1214310:CDS | 35.0% |
| ATTGATTAAACTTGTGCGGA+TGG | - | chr8_1:74822242-74822261 | Msa1214310:CDS | 35.0% | |
| !! | ATACATCTCCACTTTTGCAT+AGG | - | chr8_1:74822586-74822605 | Msa1214310:intron | 35.0% |
| ! | TAATTAGGGTACTCTCTACA+GGG | - | chr8_1:74822623-74822642 | Msa1214310:intron | 35.0% |
| !! | AAGCCACATTTTAGTACTTG+TGG | - | chr8_1:74822657-74822676 | Msa1214310:intron | 35.0% |
| !! | AGCCACATTTTAGTACTTGT+GGG | - | chr8_1:74822658-74822677 | Msa1214310:intron | 35.0% |
| ATCCCACAAGTACTAAAATG+TGG | + | chr8_1:74822663-74822682 | None:intergenic | 35.0% | |
| !! | TTTGGTGTTCAGTTTGAGTT+TGG | - | chr8_1:74822757-74822776 | Msa1214310:intron | 35.0% |
| TAAAGCTACAATCAGAACAG+AGG | + | chr8_1:74822906-74822925 | None:intergenic | 35.0% | |
| ! | CTGTTCTGATTGTAGCTTTA+TGG | - | chr8_1:74822906-74822925 | Msa1214310:intron | 35.0% |
| CTTTATGGGTACTAACAGAA+GGG | - | chr8_1:74822921-74822940 | Msa1214310:intron | 35.0% | |
| TTGGAGTTCTCAGTAATGAT+CGG | - | chr8_1:74823050-74823069 | Msa1214310:intron | 35.0% | |
| AAAGAGGTTATTCACCTTGA+AGG | + | chr8_1:74823092-74823111 | None:intergenic | 35.0% | |
| CACATTAGTTGAATGTTCCA+GGG | + | chr8_1:74823275-74823294 | None:intergenic | 35.0% | |
| ACACATTAGTTGAATGTTCC+AGG | + | chr8_1:74823276-74823295 | None:intergenic | 35.0% | |
| TTCTAAACTGCGAGTAATCT+TGG | - | chr8_1:74823306-74823325 | Msa1214310:CDS | 35.0% | |
| TACATTGTCATGGAATGGAA+GGG | + | chr8_1:74823521-74823540 | None:intergenic | 35.0% | |
| TTACATTGTCATGGAATGGA+AGG | + | chr8_1:74823522-74823541 | None:intergenic | 35.0% | |
| GTTGTTACATTGTCATGGAA+TGG | + | chr8_1:74823526-74823545 | None:intergenic | 35.0% | |
| TTTATTAAGGGTTCGGATCA+GGG | + | chr8_1:74823548-74823567 | None:intergenic | 35.0% | |
| TGGATCCTTTATTAAGGGTT+CGG | + | chr8_1:74823555-74823574 | None:intergenic | 35.0% | |
| ! | TTTTAAGCTTAAACTGCTCG+GGG | - | chr8_1:74823592-74823611 | Msa1214310:intron | 35.0% |
| GAATGTGAGGAATCATTTGA+GGG | + | chr8_1:74823639-74823658 | None:intergenic | 35.0% | |
| AGAATGTGAGGAATCATTTG+AGG | + | chr8_1:74823640-74823659 | None:intergenic | 35.0% | |
| ! | TGATATTTTATCAGCCTGTG+AGG | - | chr8_1:74823933-74823952 | Msa1214310:intron | 35.0% |
| ! | AACTTTTGACAATCAGGTGT+GGG | - | chr8_1:74824044-74824063 | Msa1214310:intron | 35.0% |
| AATTCATCCCTCTATGTTGT+AGG | - | chr8_1:74824279-74824298 | Msa1214310:intron | 35.0% | |
| ! | CCTGAAATCTTTTTAACGGT+TGG | + | chr8_1:74824322-74824341 | None:intergenic | 35.0% |
| CCAACCGTTAAAAAGATTTC+AGG | - | chr8_1:74824319-74824338 | Msa1214310:intron | 35.0% | |
| AGCGACTGAAGTTAAAATTG+TGG | + | chr8_1:74824395-74824414 | None:intergenic | 35.0% | |
| ! | CTTTCAAAGACTTGCTTGAT+AGG | + | chr8_1:74824518-74824537 | None:intergenic | 35.0% |
| CTATCAAGCAAGTCTTTGAA+AGG | - | chr8_1:74824516-74824535 | Msa1214310:CDS | 35.0% | |
| AAAGGAGGAAGCCAAATAAA+AGG | - | chr8_1:74824534-74824553 | Msa1214310:CDS | 35.0% | |
| AAGGAGGAAGCCAAATAAAA+GGG | - | chr8_1:74824535-74824554 | Msa1214310:CDS | 35.0% | |
| GATAGAACTAGAACCAGATA+TGG | + | chr8_1:74824594-74824613 | None:intergenic | 35.0% | |
| TCTACTTTCGAAATCTACAC+AGG | + | chr8_1:74824619-74824638 | None:intergenic | 35.0% | |
| CAAAGATGTCACTCTAATGT+TGG | + | chr8_1:74824647-74824666 | None:intergenic | 35.0% | |
| GGATCCACTGAGAAATAGAT+GGG | + | chr8_1:74821737-74821756 | None:intergenic | 40.0% | |
| AAAAATTCCCTCAGCACTTC+TGG | - | chr8_1:74821810-74821829 | Msa1214310:CDS | 40.0% | |
| TTCGTCTGCACTCACAAAAA+AGG | - | chr8_1:74822014-74822033 | Msa1214310:intron | 40.0% | |
| TCGTCTGCACTCACAAAAAA+GGG | - | chr8_1:74822015-74822034 | Msa1214310:intron | 40.0% | |
| AAAAGGGACAAGATACGAAG+CGG | - | chr8_1:74822031-74822050 | Msa1214310:intron | 40.0% | |
| GATCCTGAATTCAAACAAGG+TGG | - | chr8_1:74822060-74822079 | Msa1214310:CDS | 40.0% | |
| ! | TGTCCACCTTGTTTGAATTC+AGG | + | chr8_1:74822066-74822085 | None:intergenic | 40.0% |
| TTAAACTTGTGCGGATGGAT+AGG | - | chr8_1:74822247-74822266 | Msa1214310:CDS | 40.0% | |
| TAAACTTGTGCGGATGGATA+GGG | - | chr8_1:74822248-74822267 | Msa1214310:CDS | 40.0% | |
| ! | GGTTGACTTTGTCTCTACAA+TGG | - | chr8_1:74822269-74822288 | Msa1214310:intron | 40.0% |
| ATCCTGAATTAGTCCGTTTG+TGG | - | chr8_1:74822411-74822430 | Msa1214310:intron | 40.0% | |
| TCCTGAATTAGTCCGTTTGT+GGG | - | chr8_1:74822412-74822431 | Msa1214310:intron | 40.0% | |
| ACGAATGGTGATCTTAGACT+TGG | + | chr8_1:74822479-74822498 | None:intergenic | 40.0% | |
| TTAGCGTTCCTATGCAAAAG+TGG | + | chr8_1:74822597-74822616 | None:intergenic | 40.0% | |
| ! | CTAATTAGGGTACTCTCTAC+AGG | - | chr8_1:74822622-74822641 | Msa1214310:intron | 40.0% |
| CTTGGATGCATTCTTTGACT+TGG | - | chr8_1:74822704-74822723 | Msa1214310:intron | 40.0% | |
| TGGCATCGCTAAATTGATTG+AGG | - | chr8_1:74822777-74822796 | Msa1214310:intron | 40.0% | |
| GGCATCGCTAAATTGATTGA+GGG | - | chr8_1:74822778-74822797 | Msa1214310:intron | 40.0% | |
| TCGCTAAATTGATTGAGGGA+TGG | - | chr8_1:74822782-74822801 | Msa1214310:intron | 40.0% | |
| TTTGTCACATTATGGTGAGG+CGG | - | chr8_1:74822809-74822828 | Msa1214310:intron | 40.0% | |
| ! | ATACAAGTTCTGGCCAATAG+TGG | - | chr8_1:74822875-74822894 | Msa1214310:intron | 40.0% |
| GCTTTATGGGTACTAACAGA+AGG | - | chr8_1:74822920-74822939 | Msa1214310:intron | 40.0% | |
| ! | GTGCATGAACTCTAAAGACT+CGG | - | chr8_1:74822952-74822971 | Msa1214310:intron | 40.0% |
| AATAACACCACCAATGAGAG+CGG | + | chr8_1:74822987-74823006 | None:intergenic | 40.0% | |
| TTGAAGGTTGTGATTAGACG+AGG | + | chr8_1:74823076-74823095 | None:intergenic | 40.0% | |
| TCGTCTAATCACAACCTTCA+AGG | - | chr8_1:74823075-74823094 | Msa1214310:intron | 40.0% | |
| TTCAGTTGTAGCAGATAGAG+TGG | - | chr8_1:74823197-74823216 | Msa1214310:CDS | 40.0% | |
| AATTTGTGATTGTGTGGGTG+TGG | - | chr8_1:74823430-74823449 | Msa1214310:intron | 40.0% | |
| ATTTGTGATTGTGTGGGTGT+GGG | - | chr8_1:74823431-74823450 | Msa1214310:intron | 40.0% | |
| ACATTGTCATGGAATGGAAG+GGG | + | chr8_1:74823520-74823539 | None:intergenic | 40.0% | |
| TCAGGGTTGTTACATTGTCA+TGG | + | chr8_1:74823531-74823550 | None:intergenic | 40.0% | |
| CTTTATTAAGGGTTCGGATC+AGG | + | chr8_1:74823549-74823568 | None:intergenic | 40.0% | |
| CTGATCCGAACCCTTAATAA+AGG | - | chr8_1:74823547-74823566 | Msa1214310:intron | 40.0% | |
| TTTAAGCTTAAACTGCTCGG+GGG | - | chr8_1:74823593-74823612 | Msa1214310:intron | 40.0% | |
| AACTCTAGTCTCTAGCCAAT+AGG | + | chr8_1:74823757-74823776 | None:intergenic | 40.0% | |
| ! | ATTTTATCAGCCTGTGAGGA+AGG | - | chr8_1:74823937-74823956 | Msa1214310:intron | 40.0% |
| ! | TTTTATCAGCCTGTGAGGAA+GGG | - | chr8_1:74823938-74823957 | Msa1214310:intron | 40.0% |
| ! | AATGGTGGTGTGACAAAAAC+AGG | - | chr8_1:74823965-74823984 | Msa1214310:intron | 40.0% |
| ! | GAACTTTTGACAATCAGGTG+TGG | - | chr8_1:74824043-74824062 | Msa1214310:intron | 40.0% |
| CCAACAACCTACAACATAGA+GGG | + | chr8_1:74824289-74824308 | None:intergenic | 40.0% | |
| TCCAACAACCTACAACATAG+AGG | + | chr8_1:74824290-74824309 | None:intergenic | 40.0% | |
| TTGTAGGTTGTTGGAAATCC+AGG | - | chr8_1:74824295-74824314 | Msa1214310:intron | 40.0% | |
| !! | ATCTTTTTAACGGTTGGTCC+TGG | + | chr8_1:74824316-74824335 | None:intergenic | 40.0% |
| ! | TCAAAGACTTGCTTGATAGG+AGG | + | chr8_1:74824515-74824534 | None:intergenic | 40.0% |
| ! | TCAAGCAAGTCTTTGAAAGG+AGG | - | chr8_1:74824519-74824538 | Msa1214310:CDS | 40.0% |
| CCAAATAAAAGGGCAGCATA+GGG | - | chr8_1:74824545-74824564 | Msa1214310:CDS | 40.0% | |
| GGTTGCATTCCAAACCGAAT+AGG | + | chr8_1:74821545-74821564 | None:intergenic | 45.0% | |
| AAGAACAACCAACTACCACG+AGG | + | chr8_1:74821638-74821657 | None:intergenic | 45.0% | |
| ! | TGGACCCATCTATTTCTCAG+TGG | - | chr8_1:74821730-74821749 | Msa1214310:three_prime_UTR | 45.0% |
| CGGATCCACTGAGAAATAGA+TGG | + | chr8_1:74821738-74821757 | None:intergenic | 45.0% | |
| !! | GTGAGCTCTGAATGCGATTA+AGG | + | chr8_1:74821787-74821806 | None:intergenic | 45.0% |
| TAATCGCATTCAGAGCTCAC+AGG | - | chr8_1:74821787-74821806 | Msa1214310:exon | 45.0% | |
| AACAAGGTGGACAACGAAAC+TGG | - | chr8_1:74822073-74822092 | Msa1214310:CDS | 45.0% | |
| TCAATACAATCGTCCACCAG+CGG | + | chr8_1:74822392-74822411 | None:intergenic | 45.0% | |
| AACAGAGGCAATGCCACTAT+TGG | + | chr8_1:74822891-74822910 | None:intergenic | 45.0% | |
| ATGGGTACTAACAGAAGGGA+AGG | - | chr8_1:74822925-74822944 | Msa1214310:intron | 45.0% | |
| GCTCTAATTACCGCTCTCAT+TGG | - | chr8_1:74822974-74822993 | Msa1214310:intron | 45.0% | |
| CTAATTACCGCTCTCATTGG+TGG | - | chr8_1:74822977-74822996 | Msa1214310:intron | 45.0% | |
| !! | GCTCTCATTGGTGGTGTTAT+TGG | - | chr8_1:74822986-74823005 | Msa1214310:intron | 45.0% |
| CTCCATTGCAGCAGCAATAA+TGG | + | chr8_1:74823012-74823031 | None:intergenic | 45.0% | |
| ATTGAAAGGGCTGGGTCATT+AGG | - | chr8_1:74823456-74823475 | Msa1214310:intron | 45.0% | |
| TTAAGCTTAAACTGCTCGGG+GGG | - | chr8_1:74823594-74823613 | Msa1214310:intron | 45.0% | |
| GGAATCATTTGAGGGAGGTT+AGG | + | chr8_1:74823631-74823650 | None:intergenic | 45.0% | |
| TGTGAGGAATCATTTGAGGG+AGG | + | chr8_1:74823636-74823655 | None:intergenic | 45.0% | |
| CGCGTAAGTCACATTCCTAT+TGG | - | chr8_1:74823739-74823758 | Msa1214310:intron | 45.0% | |
| ! | TGTGGCAGCATGGCATTTTA+AGG | + | chr8_1:74823792-74823811 | None:intergenic | 45.0% |
| GGCGCAACATTGCAATTTAG+TGG | - | chr8_1:74824151-74824170 | Msa1214310:CDS | 45.0% | |
| ATTCTGCTCTATTCGCCAGA+AGG | - | chr8_1:74824174-74824193 | Msa1214310:CDS | 45.0% | |
| CCCTCTATGTTGTAGGTTGT+TGG | - | chr8_1:74824286-74824305 | Msa1214310:intron | 45.0% | |
| GCCAAATAAAAGGGCAGCAT+AGG | - | chr8_1:74824544-74824563 | Msa1214310:CDS | 45.0% | |
| ! | CCCTATGCTGCCCTTTTATT+TGG | + | chr8_1:74824548-74824567 | None:intergenic | 45.0% |
| ATGAAGAGGATGACGATGCA+TGG | - | chr8_1:74824706-74824725 | Msa1214310:CDS | 45.0% | |
| TGACGATGCATGGCATTGTT+AGG | - | chr8_1:74824716-74824735 | Msa1214310:CDS | 45.0% | |
| CGTGTTCCTCGTTGCCTATT+CGG | - | chr8_1:74821528-74821547 | Msa1214310:three_prime_UTR | 50.0% | |
| TCCTCGTTGCCTATTCGGTT+TGG | - | chr8_1:74821533-74821552 | Msa1214310:three_prime_UTR | 50.0% | |
| TCCAAACCGAATAGGCAACG+AGG | + | chr8_1:74821537-74821556 | None:intergenic | 50.0% | |
| AACAACCAACTACCACGAGG+TGG | + | chr8_1:74821635-74821654 | None:intergenic | 50.0% | |
| TTCTCAGTGGATCCGACCAT+TGG | - | chr8_1:74821743-74821762 | Msa1214310:three_prime_UTR | 50.0% | |
| CAGTGACAGCAACCAATGGT+CGG | + | chr8_1:74821758-74821777 | None:intergenic | 50.0% | |
| CCAACAGTGACAGCAACCAA+TGG | + | chr8_1:74821762-74821781 | None:intergenic | 50.0% | |
| ! | CCATTGGTTGCTGTCACTGT+TGG | - | chr8_1:74821759-74821778 | Msa1214310:three_prime_UTR | 50.0% |
| !! | AAGTGCACCAGAAGTGCTGA+GGG | + | chr8_1:74821820-74821839 | None:intergenic | 50.0% |
| AATACAATCGTCCACCAGCG+GGG | + | chr8_1:74822390-74822409 | None:intergenic | 50.0% | |
| CAATACAATCGTCCACCAGC+GGG | + | chr8_1:74822391-74822410 | None:intergenic | 50.0% | |
| !! | GCCCACAAACGGACTAATTC+AGG | + | chr8_1:74822416-74822435 | None:intergenic | 50.0% |
| GAATTAGTCCGTTTGTGGGC+CGG | - | chr8_1:74822416-74822435 | Msa1214310:intron | 50.0% | |
| TTCAGTATCCGGCCCACAAA+CGG | + | chr8_1:74822427-74822446 | None:intergenic | 50.0% | |
| TGAGGCGGTTGACCTGAATT+TGG | - | chr8_1:74822824-74822843 | Msa1214310:intron | 50.0% | |
| GGCCATTATTGCTGCTGCAA+TGG | - | chr8_1:74823007-74823026 | Msa1214310:intron | 50.0% | |
| GACACATGGTCTTCTGAGCT+TGG | - | chr8_1:74823031-74823050 | Msa1214310:intron | 50.0% | |
| TGTGGGTGTGGGACATTGAA+AGG | - | chr8_1:74823442-74823461 | Msa1214310:intron | 50.0% | |
| GTGGGTGTGGGACATTGAAA+GGG | - | chr8_1:74823443-74823462 | Msa1214310:intron | 50.0% | |
| TGTGGGACATTGAAAGGGCT+GGG | - | chr8_1:74823448-74823467 | Msa1214310:intron | 50.0% | |
| AAATGCCATGCTGCCACAAG+TGG | - | chr8_1:74823794-74823813 | Msa1214310:intron | 50.0% | |
| ATAAGCCACTTGTGGCAGCA+TGG | + | chr8_1:74823802-74823821 | None:intergenic | 50.0% | |
| CCATTTGTACCCTTCCTCAC+AGG | + | chr8_1:74823950-74823969 | None:intergenic | 50.0% | |
| ! | CCTGTGAGGAAGGGTACAAA+TGG | - | chr8_1:74823947-74823966 | Msa1214310:intron | 50.0% |
| ! | GTGAGGAAGGGTACAAATGG+TGG | - | chr8_1:74823950-74823969 | Msa1214310:intron | 50.0% |
| ACTTCCACATAGTCCTGCCA+CGG | + | chr8_1:74824113-74824132 | None:intergenic | 50.0% | |
| TTCCATTCCACTCCACCTCG+TGG | - | chr8_1:74821620-74821639 | Msa1214310:three_prime_UTR | 55.0% | |
| TACCACGAGGTGGAGTGGAA+TGG | + | chr8_1:74821625-74821644 | None:intergenic | 55.0% | |
| !! | CAAGTGCACCAGAAGTGCTG+AGG | + | chr8_1:74821821-74821840 | None:intergenic | 55.0% |
| AGCACTTCTGGTGCACTTGC+TGG | - | chr8_1:74821822-74821841 | Msa1214310:CDS | 55.0% | |
| ATACAATCGTCCACCAGCGG+GGG | + | chr8_1:74822389-74822408 | None:intergenic | 55.0% | |
| GCTGCTGCAATGGAGACACA+TGG | - | chr8_1:74823017-74823036 | Msa1214310:intron | 55.0% | |
| GTGTGGGACATTGAAAGGGC+TGG | - | chr8_1:74823447-74823466 | Msa1214310:intron | 55.0% | |
| !! | GCAGCTGGTGGAAGTGTCAT+TGG | - | chr8_1:74824001-74824020 | Msa1214310:intron | 55.0% |
| TAGTCCTGCCACGGTAGTGA+GGG | + | chr8_1:74824104-74824123 | None:intergenic | 55.0% | |
| ATAGTCCTGCCACGGTAGTG+AGG | + | chr8_1:74824105-74824124 | None:intergenic | 55.0% | |
| ACTACCGTGGCAGGACTATG+TGG | - | chr8_1:74824106-74824125 | Msa1214310:intron | 55.0% | |
| CCAACTACCACGAGGTGGAG+TGG | + | chr8_1:74821630-74821649 | None:intergenic | 60.0% | |
| CCACTCCACCTCGTGGTAGT+TGG | - | chr8_1:74821627-74821646 | Msa1214310:three_prime_UTR | 60.0% | |
| TACAATCGTCCACCAGCGGG+GGG | + | chr8_1:74822388-74822407 | None:intergenic | 60.0% | |
| GGACTTCTAGCAGCTGCAGC+TGG | - | chr8_1:74823986-74824005 | Msa1214310:intron | 60.0% | |
| CTTCTAGCAGCTGCAGCTGG+TGG | - | chr8_1:74823989-74824008 | Msa1214310:intron | 60.0% | |
| GGTCATACCCCTCACTACCG+TGG | - | chr8_1:74824093-74824112 | Msa1214310:intron | 60.0% | |
| ATACCCCTCACTACCGTGGC+AGG | - | chr8_1:74824097-74824116 | Msa1214310:intron | 60.0% | |
| AGTCCTGCCACGGTAGTGAG+GGG | + | chr8_1:74824103-74824122 | None:intergenic | 60.0% | |
| ACAATCGTCCACCAGCGGGG+GGG | + | chr8_1:74822387-74822406 | None:intergenic | 65.0% | |
| CGGGGGGGGGGTCCAATTGT+TGG | + | chr8_1:74822372-74822391 | None:intergenic | 70.0% | |
| AATCGTCCACCAGCGGGGGG+GGG | + | chr8_1:74822385-74822404 | None:intergenic | 70.0% | |
| CAATCGTCCACCAGCGGGGG+GGG | + | chr8_1:74822386-74822405 | None:intergenic | 70.0% | |
| CAATTGGACCCCCCCCCCGC+TGG | - | chr8_1:74822373-74822392 | Msa1214310:intron | 75.0% | |
| ATCGTCCACCAGCGGGGGGG+GGG | + | chr8_1:74822384-74822403 | None:intergenic | 75.0% | |
| ! | TTGGACCCCCCCCCCGCTGG+TGG | - | chr8_1:74822376-74822395 | Msa1214310:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 74821469 | 74824763 | 74821469 | ID=Msa1214310;Name=Msa1214310 |
| chr8_1 | mRNA | 74821469 | 74824763 | 74821469 | ID=Msa1214310-mRNA-1;Parent=Msa1214310;Name=Msa1214310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=14|1|1|1|1|1|5|331|372 |
| chr8_1 | exon | 74821469 | 74821931 | 74821469 | ID=Msa1214310-mRNA-1:exon:25692;Parent=Msa1214310-mRNA-1 |
| chr8_1 | exon | 74822037 | 74822285 | 74822037 | ID=Msa1214310-mRNA-1:exon:25691;Parent=Msa1214310-mRNA-1 |
| chr8_1 | exon | 74823136 | 74823358 | 74823136 | ID=Msa1214310-mRNA-1:exon:25690;Parent=Msa1214310-mRNA-1 |
| chr8_1 | exon | 74824138 | 74824251 | 74824138 | ID=Msa1214310-mRNA-1:exon:25689;Parent=Msa1214310-mRNA-1 |
| chr8_1 | exon | 74824349 | 74824763 | 74824349 | ID=Msa1214310-mRNA-1:exon:25688;Parent=Msa1214310-mRNA-1 |
| chr8_1 | five_prime_UTR | 74824750 | 74824763 | 74824750 | ID=Msa1214310-mRNA-1:five_prime_utr;Parent=Msa1214310-mRNA-1 |
| chr8_1 | CDS | 74824349 | 74824749 | 74824349 | ID=Msa1214310-mRNA-1:cds;Parent=Msa1214310-mRNA-1 |
| chr8_1 | CDS | 74824138 | 74824251 | 74824138 | ID=Msa1214310-mRNA-1:cds;Parent=Msa1214310-mRNA-1 |
| chr8_1 | CDS | 74823136 | 74823358 | 74823136 | ID=Msa1214310-mRNA-1:cds;Parent=Msa1214310-mRNA-1 |
| chr8_1 | CDS | 74822037 | 74822285 | 74822037 | ID=Msa1214310-mRNA-1:cds;Parent=Msa1214310-mRNA-1 |
| chr8_1 | CDS | 74821800 | 74821931 | 74821800 | ID=Msa1214310-mRNA-1:cds;Parent=Msa1214310-mRNA-1 |
| chr8_1 | three_prime_UTR | 74821469 | 74821799 | 74821469 | ID=Msa1214310-mRNA-1:three_prime_utr;Parent=Msa1214310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
