AlfalfaGEDB | Msa1043250

M. sativa cultivar zhongmu-4 / Msa1043250

KEGG: K07556
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0008150 GO:0009987 GO:0016043 GO:0016604 GO:0016607 GO:0022607 GO:0031974 GO:0031981 GO:0034622 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043461 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0065003 GO:0070013 GO:0070071 GO:0071840
PFAM: PF07542.14

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1043250	XP_013443378.1	94.301	193	11	0	1	193	1	193	6.95e-130	379

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1043250	A0A072TKN2	94.301	193	11	0	1	193	1	193	3.32e-130	379

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0007440	Msa1043250	-0.828970	6.687198e-55	-8.615850e-47
Msa0010490	Msa1043250	-0.820867	5.466264e-53	-8.615850e-47
Msa0010500	Msa1043250	-0.825194	5.354047e-54	-8.615850e-47
Msa0015140	Msa1043250	-0.806584	7.662881e-50	-8.615850e-47
Msa0032470	Msa1043250	-0.847846	8.928658e-60	-8.615850e-47
Msa0033110	Msa1043250	-0.801198	1.008016e-48	-8.615850e-47
Msa0043980	Msa1043250	-0.808541	2.944013e-50	-8.615850e-47
Msa0072420	Msa1043250	-0.803476	3.423989e-49	-8.615850e-47
Msa0079070	Msa1043250	-0.819292	1.253970e-52	-8.615850e-47
Msa0083280	Msa1043250	-0.835054	2.097687e-56	-8.615850e-47
Msa0084380	Msa1043250	-0.808077	3.697917e-50	-8.615850e-47
Msa0086420	Msa1043250	-0.830783	2.417501e-55	-8.615850e-47
Msa0087800	Msa1043250	-0.848573	5.623816e-60	-8.615850e-47
Msa0089820	Msa1043250	-0.813958	1.966371e-51	-8.615850e-47
Msa0090550	Msa1043250	-0.805523	1.280908e-49	-8.615850e-47
Msa0103790	Msa1043250	-0.805769	1.137539e-49	-8.615850e-47
Msa0104230	Msa1043250	-0.805603	1.232738e-49	-8.615850e-47
Msa0104240	Msa1043250	-0.806371	8.498967e-50	-8.615850e-47
Msa0114060	Msa1043250	-0.807927	3.980317e-50	-8.615850e-47
Msa0610130	Msa1043250	-0.814056	1.870756e-51	-8.615850e-47
Msa0610180	Msa1043250	-0.802644	5.087637e-49	-8.615850e-47
Msa0617640	Msa1043250	-0.804085	2.558146e-49	-8.615850e-47
Msa0625700	Msa1043250	-0.806778	6.973221e-50	-8.615850e-47
Msa0649350	Msa1043250	-0.810254	1.262728e-50	-8.615850e-47
Msa0661190	Msa1043250	0.818239	2.174524e-52	-8.615850e-47
Msa0682680	Msa1043250	-0.808705	2.716239e-50	-8.615850e-47
Msa0703910	Msa1043250	-0.803729	3.033532e-49	-8.615850e-47
Msa0711100	Msa1043250	-0.800460	1.426524e-48	-8.615850e-47
Msa0740510	Msa1043250	-0.805502	1.294210e-49	-8.615850e-47
Msa0741440	Msa1043250	-0.837005	6.708648e-57	-8.615850e-47
Msa0742750	Msa1043250	-0.846665	1.883274e-59	-8.615850e-47
Msa0753990	Msa1043250	0.809589	1.756047e-50	-8.615850e-47
Msa0801730	Msa1043250	-0.802574	5.260393e-49	-8.615850e-47
Msa0807070	Msa1043250	0.830948	2.202458e-55	-8.615850e-47
Msa0820770	Msa1043250	-0.809558	1.783581e-50	-8.615850e-47
Msa0822500	Msa1043250	-0.826174	3.136026e-54	-8.615850e-47
Msa0827350	Msa1043250	0.812623	3.862471e-51	-8.615850e-47
Msa0832150	Msa1043250	-0.805847	1.095668e-49	-8.615850e-47
Msa0137480	Msa1043250	-0.802555	5.307222e-49	-8.615850e-47
Msa0137710	Msa1043250	0.809493	1.841163e-50	-8.615850e-47
Msa0138020	Msa1043250	-0.813823	2.105610e-51	-8.615850e-47
Msa0140500	Msa1043250	0.832014	1.203829e-55	-8.615850e-47
Msa0148080	Msa1043250	-0.820244	7.598772e-53	-8.615850e-47
Msa0150230	Msa1043250	-0.806697	7.252051e-50	-8.615850e-47
Msa0156700	Msa1043250	-0.830740	2.476625e-55	-8.615850e-47
Msa0167980	Msa1043250	-0.822645	2.120883e-53	-8.615850e-47
Msa0170570	Msa1043250	-0.801460	8.910072e-49	-8.615850e-47
Msa0175540	Msa1043250	-0.845413	4.125890e-59	-8.615850e-47
Msa0178510	Msa1043250	-0.803990	2.677634e-49	-8.615850e-47
Msa0180510	Msa1043250	0.804134	2.498822e-49	-8.615850e-47
Msa0207040	Msa1043250	0.805413	1.351399e-49	-8.615850e-47
Msa0207670	Msa1043250	-0.818884	1.552846e-52	-8.615850e-47
Msa0209500	Msa1043250	-0.815958	7.079369e-52	-8.615850e-47
Msa0236510	Msa1043250	0.818516	1.881914e-52	-8.615850e-47
Msa0380100	Msa1043250	-0.802180	6.341193e-49	-8.615850e-47
Msa0381610	Msa1043250	0.816352	5.779706e-52	-8.615850e-47
Msa0383800	Msa1043250	-0.802852	4.609531e-49	-8.615850e-47
Msa0385490	Msa1043250	-0.803722	3.043176e-49	-8.615850e-47
Msa0385500	Msa1043250	-0.801295	9.629875e-49	-8.615850e-47
Msa0389610	Msa1043250	0.845254	4.553715e-59	-8.615850e-47
Msa0394470	Msa1043250	-0.814173	1.762945e-51	-8.615850e-47
Msa0417330	Msa1043250	-0.805133	1.546394e-49	-8.615850e-47
Msa0422180	Msa1043250	-0.812391	4.340297e-51	-8.615850e-47
Msa0468320	Msa1043250	-0.815541	8.768380e-52	-8.615850e-47
Msa0479970	Msa1043250	-0.809353	1.972850e-50	-8.615850e-47
Msa0980540	Msa1043250	-0.802696	4.963299e-49	-8.615850e-47
Msa0980880	Msa1043250	-0.806983	6.309894e-50	-8.615850e-47
Msa0994390	Msa1043250	-0.801691	7.990478e-49	-8.615850e-47
Msa1001390	Msa1043250	-0.821283	4.383682e-53	-8.615850e-47
Msa1006910	Msa1043250	0.828496	8.704977e-55	-8.615850e-47
Msa1011090	Msa1043250	-0.807468	4.980890e-50	-8.615850e-47
Msa1025080	Msa1043250	-0.818149	2.278908e-52	-8.615850e-47
Msa1033410	Msa1043250	0.802910	4.482915e-49	-8.615850e-47
Msa1034150	Msa1043250	-0.812050	5.152244e-51	-8.615850e-47
Msa1043250	Msa1058170	-0.815207	1.040269e-51	-8.615850e-47
Msa1043250	Msa1063420	-0.803530	3.336685e-49	-8.615850e-47
Msa1043250	Msa1064160	0.850344	1.804665e-60	-8.615850e-47
Msa1043250	Msa1064250	-0.805546	1.266958e-49	-8.615850e-47
Msa1043250	Msa1080330	0.841972	3.435017e-58	-8.615850e-47
Msa1043250	Msa1081790	0.831103	2.017807e-55	-8.615850e-47
Msa1043250	Msa1089320	-0.809933	1.481154e-50	-8.615850e-47
Msa1043250	Msa1100130	0.802387	5.746311e-49	-8.615850e-47
Msa1043250	Msa1102790	-0.804901	1.728965e-49	-8.615850e-47
Msa1043250	Msa1109090	-0.805488	1.302909e-49	-8.615850e-47
Msa1043250	Msa1111870	-0.809089	2.248216e-50	-8.615850e-47
Msa1043250	Msa1143020	-0.809511	1.825183e-50	-8.615850e-47
Msa1043250	Msa1152920	-0.804411	2.188201e-49	-8.615850e-47
Msa1043250	Msa1156150	0.841534	4.483317e-58	-8.615850e-47
Msa1043250	Msa1166090	0.814274	1.674572e-51	-8.615850e-47
Msa1043250	Msa1168580	-0.808297	3.319274e-50	-8.615850e-47
Msa1043250	Msa1175200	-0.804745	1.863852e-49	-8.615850e-47
Msa1043250	Msa1176720	-0.808432	3.105989e-50	-8.615850e-47
Msa1043250	Msa1178060	-0.807418	5.104969e-50	-8.615850e-47
Msa1043250	Msa1188600	0.801598	8.350063e-49	-8.615850e-47
Msa1043250	Msa1191050	0.830710	2.519218e-55	-8.615850e-47
Msa1043250	Msa1191890	0.816757	4.691860e-52	-8.615850e-47
Msa1043250	Msa1207310	-0.827145	1.839350e-54	-8.615850e-47
Msa1043250	Msa1207470	0.807168	5.765582e-50	-8.615850e-47
Msa1043250	Msa1242580	0.832949	7.057279e-56	-8.615850e-47
Msa1043250	Msa1244720	0.854878	9.179425e-62	-8.615850e-47
Msa1043250	Msa1246360	-0.805832	1.103408e-49	-8.615850e-47
Msa1043250	Msa1270660	-0.805843	1.097463e-49	-8.615850e-47
Msa1043250	Msa1295330	-0.800865	1.179473e-48	-8.615850e-47
Msa1043250	Msa1305810	-0.834224	3.391707e-56	-8.615850e-47
Msa1043250	Msa1307180	-0.828360	9.388533e-55	-8.615850e-47
Msa1043250	Msa1308870	-0.805593	1.238754e-49	-8.615850e-47
Msa1043250	Msa1316360	-0.819453	1.152245e-52	-8.615850e-47
Msa1043250	Msa1316440	-0.811152	8.076454e-51	-8.615850e-47
Msa1043250	Msa1325860	0.813855	2.072240e-51	-8.615850e-47
Msa1043250	Msa1325990	-0.801618	8.272458e-49	-8.615850e-47
Msa1043250	Msa1331320	-0.813913	2.012201e-51	-8.615850e-47
Msa1043250	Msa1331350	-0.816327	5.855187e-52	-8.615850e-47
Msa1043250	Msa1332040	0.812056	5.135985e-51	-8.615850e-47
Msa1043250	Msa1340460	0.803775	2.967722e-49	-8.615850e-47
Msa1043250	Msa1346840	-0.844186	8.833904e-59	-8.615850e-47
Msa1043250	Msa1360980	-0.801852	7.404258e-49	-8.615850e-47
Msa1043250	Msa1364210	-0.810573	1.077999e-50	-8.615850e-47
Msa1043250	Msa1372150	-0.806771	6.996127e-50	-8.615850e-47
Msa1043250	Msa1382790	-0.816467	5.448230e-52	-8.615850e-47
Msa1043250	Msa1394380	-0.801185	1.014595e-48	-8.615850e-47
Msa1043250	Msa1396400	0.816438	5.530192e-52	-8.615850e-47
Msa1043250	Msa1401990	-0.848971	4.361523e-60	-8.615850e-47
Msa1043250	Msa1404300	-0.855495	6.072163e-62	-8.615850e-47
Msa1043250	Msa1406110	0.834808	2.418854e-56	-8.615850e-47
Msa1043250	Msa1407190	-0.843868	1.075284e-58	-8.615850e-47
Msa1043250	Msa1411100	-0.804668	1.934091e-49	-8.615850e-47
Msa1043250	Msa1416370	-0.818078	2.365214e-52	-8.615850e-47
Msa1043250	Msa1419690	-0.806755	7.050553e-50	-8.615850e-47
Msa1043250	Msa1432130	-0.823876	1.093643e-53	-8.615850e-47
Msa1043250	Msa1437270	-0.811748	5.995522e-51	-8.615850e-47
Msa1043250	Msa1445390	0.829425	5.183844e-55	-8.615850e-47
Msa1043250	Msa1449340	0.847712	9.725215e-60	-8.615850e-47
Msa1043250	Msa1457620	-0.803623	3.191352e-49	-8.615850e-47
Msa1043250	Msa1463900	-0.818846	1.583846e-52	-8.615850e-47
Msa1043250	Msa1465610	0.803084	4.126981e-49	-8.615850e-47
Msa0241140	Msa1043250	-0.804794	1.820344e-49	-8.615850e-47
Msa0257520	Msa1043250	-0.812103	5.016892e-51	-8.615850e-47
Msa0305410	Msa1043250	-0.813356	2.667958e-51	-8.615850e-47
Msa0318680	Msa1043250	-0.806653	7.409166e-50	-8.615850e-47
Msa0347750	Msa1043250	-0.816316	5.889470e-52	-8.615850e-47
Msa0349700	Msa1043250	-0.805073	1.591627e-49	-8.615850e-47
Msa0485490	Msa1043250	-0.813338	2.691860e-51	-8.615850e-47
Msa0510930	Msa1043250	-0.806560	7.751551e-50	-8.615850e-47
Msa0518440	Msa1043250	-0.824138	9.493170e-54	-8.615850e-47
Msa0521270	Msa1043250	-0.803624	3.189433e-49	-8.615850e-47
Msa0528020	Msa1043250	0.800743	1.249185e-48	-8.615850e-47
Msa0528610	Msa1043250	0.837064	6.479035e-57	-8.615850e-47
Msa0531020	Msa1043250	-0.800866	1.178665e-48	-8.615850e-47
Msa0532980	Msa1043250	-0.804459	2.138259e-49	-8.615850e-47
Msa0544840	Msa1043250	-0.859795	3.230574e-63	-8.615850e-47
Msa0547160	Msa1043250	-0.814900	1.217187e-51	-8.615850e-47
Msa0549780	Msa1043250	-0.822308	2.539424e-53	-8.615850e-47
Msa0564130	Msa1043250	-0.811958	5.395510e-51	-8.615850e-47
Msa0580180	Msa1043250	-0.808691	2.734818e-50	-8.615850e-47
Msa0847900	Msa1043250	-0.821234	4.500381e-53	-8.615850e-47
Msa0861090	Msa1043250	-0.811343	7.339763e-51	-8.615850e-47
Msa0867520	Msa1043250	0.817673	2.918296e-52	-8.615850e-47
Msa0877710	Msa1043250	-0.802517	5.403274e-49	-8.615850e-47
Msa0894710	Msa1043250	-0.805614	1.226132e-49	-8.615850e-47
Msa0928130	Msa1043250	-0.808725	2.689018e-50	-8.615850e-47
Msa0942550	Msa1043250	0.824131	9.532036e-54	-8.615850e-47
Msa0942560	Msa1043250	0.804178	2.446594e-49	-8.615850e-47
Msa0944200	Msa1043250	-0.806794	6.917891e-50	-8.615850e-47
Msa0946280	Msa1043250	0.850994	1.184758e-60	-8.615850e-47
Msa0969810	Msa1043250	-0.810116	1.352740e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1043250	MtrunA17_Chr7g0230121	94.301	193	11	0	1	193	1	193	6.39e-134	379

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1043250	AT5G40660.1	72.549	153	41	1	44	195	47	199	1.35e-76	233

Find 70 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCAAATGCTCAATAATTT+TGG	0.051463	7_2:+1294395	None:intergenic
GAGAGGGTGGATGGAAATTT+AGG	0.165187	7_2:+1297140	None:intergenic
AAAAGTGATATTGATGGTTT+TGG	0.219731	7_2:-1294090	Msa1043250:three_prime_UTR
CACCGGAGTGTCCGGCGTTT+TGG	0.294846	7_2:-1297113	Msa1043250:CDS
TCGCCGCAGTCGGTGATTTC+AGG	0.324473	7_2:+1297021	None:intergenic
AGAGGGTGGATGGAAATTTA+GGG	0.345923	7_2:+1297141	None:intergenic
ATTTAGAAAAGTGATATTGA+TGG	0.393470	7_2:-1294096	Msa1043250:three_prime_UTR
CTCCGCGGCGGCGGCCGACG+AGG	0.401254	7_2:-1297090	Msa1043250:CDS
TTATCATTGTAGCAAATAGA+TGG	0.410965	7_2:-1294489	Msa1043250:intron
TGCTTGCACTGCCTTGGAAA+GGG	0.418660	7_2:-1294433	Msa1043250:CDS
TTTATGACGGGATCGATTGT+AGG	0.424513	7_2:-1296960	Msa1043250:CDS
GAGACTTGCTTGCACTGCCT+TGG	0.428917	7_2:-1294439	Msa1043250:CDS
TTTGTTCTTCAAAAGAAAGA+AGG	0.431518	7_2:+1297206	None:intergenic
TACTCAGCATGTATTTCGTC+AGG	0.447353	7_2:+1294236	None:intergenic
TACTGAACTTGAAGGGTGCT+GGG	0.449816	7_2:-1294213	Msa1043250:three_prime_UTR
CGGGATCGATTGTAGGGAAA+AGG	0.450926	7_2:-1296953	Msa1043250:CDS
CTCATAAGAGGCATTGTAAA+GGG	0.454432	7_2:+1294459	None:intergenic
TAACGCTATTGCTGCTGAAT+GGG	0.455806	7_2:-1296808	Msa1043250:CDS
GAGGAGGAGGAGGATAGTTT+GGG	0.460511	7_2:+1297277	None:intergenic
CTCCTCGTCGGCCGCCGCCG+CGG	0.460829	7_2:+1297088	None:intergenic
ATACTGAACTTGAAGGGTGC+TGG	0.465590	7_2:-1294214	Msa1043250:three_prime_UTR
CGCAAGCTTGGTCCATGGTA+TGG	0.470955	7_2:-1294319	Msa1043250:CDS
CTAACGCTATTGCTGCTGAA+TGG	0.471281	7_2:-1296809	Msa1043250:CDS
AGCTTAAGCGGTCTCTTAGC+AGG	0.471890	7_2:+1296849	None:intergenic
TGGGGTCATAGGCTTGCCTA+TGG	0.478017	7_2:-1294070	Msa1043250:three_prime_UTR
TAAATAGTTTCCATTGCCAT+AGG	0.492793	7_2:+1294054	None:intergenic
TCTCAGCTCACCGGAGTGTC+CGG	0.498918	7_2:-1297121	Msa1043250:CDS
CTTGCGAGTTCACTGTCATC+AGG	0.500821	7_2:+1294336	None:intergenic
GATCCCGTCATAAAAGAAAT+CGG	0.504982	7_2:+1296969	None:intergenic
TTGCTTGCACTGCCTTGGAA+AGG	0.505924	7_2:-1294434	Msa1043250:CDS
GACACTCCGGTGAGCTGAGA+GGG	0.508697	7_2:+1297124	None:intergenic
CGGTGAGCTGAGAGGGTGGA+TGG	0.511775	7_2:+1297131	None:intergenic
TGACAGTGAACTCGCAAGCT+TGG	0.523425	7_2:-1294331	Msa1043250:CDS
TTATGACGGGATCGATTGTA+GGG	0.523541	7_2:-1296959	Msa1043250:CDS
CATAGGCTTGCCTATGGCAA+TGG	0.530946	7_2:-1294064	Msa1043250:three_prime_UTR
TCTCATAAGAGGCATTGTAA+AGG	0.532856	7_2:+1294458	None:intergenic
CCGCCGCGGAGCCAAAACGC+CGG	0.535070	7_2:+1297102	None:intergenic
GTGCAAGCAAGTCTCATAAG+AGG	0.536748	7_2:+1294447	None:intergenic
TTGTTCTTCAAAAGAAAGAA+GGG	0.537004	7_2:+1297207	None:intergenic
AAGTTCTACAGTTCTGACCT+TGG	0.539163	7_2:-1294032	None:intergenic
GCTGAGTATACTGAACTTGA+AGG	0.547232	7_2:-1294221	Msa1043250:three_prime_UTR
GATGATAAGAATGTGAAAGA+AGG	0.550170	7_2:+1297232	None:intergenic
AGTTTACGCCTCGCCGCAGT+CGG	0.550895	7_2:+1297011	None:intergenic
AAGACAAGAGAAGCGGATGA+TGG	0.554937	7_2:-1296915	Msa1043250:CDS
AGCCAAAACGCCGGACACTC+CGG	0.558989	7_2:+1297111	None:intergenic
CATCCACCCTCTCAGCTCAC+CGG	0.562033	7_2:-1297130	Msa1043250:CDS
ATCATCTTTCACATTCTCAT+CGG	0.566012	7_2:-1297060	Msa1043250:CDS
ATCTTTCACATTCTCATCGG+AGG	0.570107	7_2:-1297057	Msa1043250:CDS
AAGCGGATGATGGTAATGGT+TGG	0.574002	7_2:-1296905	Msa1043250:CDS
AGAGAAGCGGATGATGGTAA+TGG	0.574159	7_2:-1296909	Msa1043250:CDS
GCGTTAGCAAGAGCAACAGT+AGG	0.579760	7_2:+1296825	None:intergenic
TGGAAAGGGTTCCTGTGACA+AGG	0.585069	7_2:-1294419	Msa1043250:CDS
CCGCAGTCGGTGATTTCAGG+TGG	0.590652	7_2:+1297024	None:intergenic
TGTATTTCGTCAGGCAATCA+CGG	0.600681	7_2:+1294245	None:intergenic
AGAAGTGAAGACAAGAGAAG+CGG	0.606025	7_2:-1296922	Msa1043250:CDS
GAGGCGTAAACTGTCGTCGT+CGG	0.606857	7_2:-1297000	Msa1043250:CDS
GAACTCGCAAGCTTGGTCCA+TGG	0.609025	7_2:-1294324	Msa1043250:CDS
ACTCCGGTGAGCTGAGAGGG+TGG	0.611094	7_2:+1297127	None:intergenic
TGTCACAGGAACCCTTTCCA+AGG	0.620314	7_2:+1294422	None:intergenic
ACTGAACTTGAAGGGTGCTG+GGG	0.623115	7_2:-1294212	Msa1043250:three_prime_UTR
ATTGAGATCAGAGATCTGAA+AGG	0.626900	7_2:+1294276	None:intergenic
TTCTTCAAAAGAAAGAAGGG+AGG	0.631937	7_2:+1297210	None:intergenic
GCAACAGTAGGAAGCTTAAG+CGG	0.640307	7_2:+1296837	None:intergenic
GTTCACTGTCATCAGGAGCA+CGG	0.645009	7_2:+1294343	None:intergenic
CTGAGTATACTGAACTTGAA+GGG	0.654558	7_2:-1294220	Msa1043250:three_prime_UTR
GGACACTCCGGTGAGCTGAG+AGG	0.655400	7_2:+1297123	None:intergenic
CCACCTGAAATCACCGACTG+CGG	0.657677	7_2:-1297024	Msa1043250:CDS
CAATAACTAACACCATACCA+TGG	0.661611	7_2:+1294307	None:intergenic
AGATGATGACTGCTCCTCGT+CGG	0.687316	7_2:+1297076	None:intergenic
TGAAATCACCGACTGCGGCG+AGG	0.688123	7_2:-1297019	Msa1043250:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTTATTTTTTTTTTTCATT+AGG	-	chr7_2:1294623-1294642	Msa1043250:intron	10.0%
!!	TAAAAATTAAAAATTTGTGA+AGG	+	chr7_2:1296636-1296655	None:intergenic	10.0%
!!	AGAACAGTAAATAAATTATA+TGG	+	chr7_2:1295645-1295664	None:intergenic	15.0%
!!	TAGCACATTAAATAAATATA+TGG	+	chr7_2:1295674-1295693	None:intergenic	15.0%
!!!	TATGAATTTTTAAATTTGGT+AGG	-	chr7_2:1295784-1295803	Msa1043250:intron	15.0%
!!!	ACTTTATATTCTGTTTTATA+TGG	-	chr7_2:1296747-1296766	Msa1043250:intron	15.0%
!!!	ACTTTTAACATATCAATTTT+AGG	-	chr7_2:1297172-1297191	Msa1043250:CDS	15.0%
!!!	TTTCTTTTGAAGAACAAAAA+TGG	-	chr7_2:1294114-1294133	Msa1043250:three_prime_UTR	20.0%
!!!	AAAGATTTTCAGTAATCAAT+TGG	+	chr7_2:1295393-1295412	None:intergenic	20.0%
!!	TAAATAATTAACGTGATAGA+GGG	+	chr7_2:1295514-1295533	None:intergenic	20.0%
!!	ATAAATAATTAACGTGATAG+AGG	+	chr7_2:1295515-1295534	None:intergenic	20.0%
!!	TGGTTGAATATAAAATAAAG+TGG	+	chr7_2:1295592-1295611	None:intergenic	20.0%
!!	CATTAAATAAATATATGGTG+TGG	+	chr7_2:1295669-1295688	None:intergenic	20.0%
!!	TCAAATAAGTTAATCAAAAG+AGG	-	chr7_2:1296185-1296204	Msa1043250:intron	20.0%
!!	AAGTTATGATCAAATACAAT+CGG	-	chr7_2:1296527-1296546	Msa1043250:intron	20.0%
!!!	GTGAAGGTTTTAATAAAAAA+TGG	+	chr7_2:1296620-1296639	None:intergenic	20.0%
!!	AAATTATTCTTGATGAATTG+AGG	-	chr7_2:1296660-1296679	Msa1043250:intron	20.0%
!!	TGTCATTGGAAATATTTAAA+AGG	-	chr7_2:1296712-1296731	Msa1043250:intron	20.0%
!!!	TATTCTGTTTTATATGGTTA+TGG	-	chr7_2:1296753-1296772	Msa1043250:intron	20.0%
!!!	ATCAAATGCTCAATAATTTT+GGG	+	chr7_2:1296922-1296941	None:intergenic	20.0%
!!!	TTAACATATCAATTTTAGGA+TGG	-	chr7_2:1297176-1297195	Msa1043250:CDS	20.0%
!!	ATTTAGAAAAGTGATATTGA+TGG	-	chr7_2:1297219-1297238	Msa1043250:five_prime_UTR	20.0%
!	TTGTTCTTCAAAAGAAAGAA+GGG	+	chr7_2:1294111-1294130	None:intergenic	25.0%
!	TTTGTTCTTCAAAAGAAAGA+AGG	+	chr7_2:1294112-1294131	None:intergenic	25.0%
!	AGGTTAGTGTAAATGAAATT+TGG	-	chr7_2:1294643-1294662	Msa1043250:intron	25.0%
!	CACAAGATAAAATAGTAGTA+AGG	-	chr7_2:1294982-1295001	Msa1043250:intron	25.0%
!!!	GTTTTTTTTTGCGAACATAA+AGG	-	chr7_2:1295309-1295328	Msa1043250:intron	25.0%
!!!	TTATTGATAGTGGCTTTTAT+TGG	+	chr7_2:1295416-1295435	None:intergenic	25.0%
!	AAAAGCCACTATCAATAATT+AGG	-	chr7_2:1295418-1295437	Msa1043250:intron	25.0%
!	AAAGCCACTATCAATAATTA+GGG	-	chr7_2:1295419-1295438	Msa1043250:intron	25.0%
!	ATTTCCCTAATTATTGATAG+TGG	+	chr7_2:1295426-1295445	None:intergenic	25.0%
!!	GTTTCTGTTATAGTTTTTCT+AGG	+	chr7_2:1295923-1295942	None:intergenic	25.0%
!	AGATATAGAGATTAATGAGT+TGG	-	chr7_2:1295952-1295971	Msa1043250:intron	25.0%
!	TAAAGCTAATTGAAAAGTCA+AGG	-	chr7_2:1296460-1296479	Msa1043250:intron	25.0%
!	CATCAAAAACATTATTGTCT+TGG	-	chr7_2:1296576-1296595	Msa1043250:intron	25.0%
!	AGGATTGTAAGCTAATATTT+AGG	-	chr7_2:1296680-1296699	Msa1043250:intron	25.0%
!	ATATTTCCAATGACAGTTAA+GGG	+	chr7_2:1296707-1296726	None:intergenic	25.0%
!	AATATTTCCAATGACAGTTA+AGG	+	chr7_2:1296708-1296727	None:intergenic	25.0%
!	TTATCATTGTAGCAAATAGA+TGG	-	chr7_2:1296826-1296845	Msa1043250:CDS	25.0%
!!	CATCAAATGCTCAATAATTT+TGG	+	chr7_2:1296923-1296942	None:intergenic	25.0%
!!!	AAAAGTGATATTGATGGTTT+TGG	-	chr7_2:1297225-1297244	Msa1043250:five_prime_UTR	25.0%
!!!	AAAGTGATATTGATGGTTTT+GGG	-	chr7_2:1297226-1297245	Msa1043250:five_prime_UTR	25.0%
	GAAAGAAGGAAAGAAAAATG+AGG	+	chr7_2:1294072-1294091	None:intergenic	30.0%
	GATGATAAGAATGTGAAAGA+AGG	+	chr7_2:1294086-1294105	None:intergenic	30.0%
	ATCATCTTTCACATTCTCAT+CGG	-	chr7_2:1294255-1294274	Msa1043250:CDS	30.0%
!	ATGCTTTACCAAAACTTGTT+TGG	+	chr7_2:1294844-1294863	None:intergenic	30.0%
	TGCTTATTATATGAGCTGTT+AGG	-	chr7_2:1294944-1294963	Msa1043250:intron	30.0%
!!	AAAAACGTTTTGGATGAATC+CGG	+	chr7_2:1295295-1295314	None:intergenic	30.0%
!	GTTCGCAAAAAAAAACGTTT+TGG	+	chr7_2:1295305-1295324	None:intergenic	30.0%
!	ACTCTTCTAATTCTCTGAAA+CGG	-	chr7_2:1295349-1295368	Msa1043250:intron	30.0%
	TATAAGTATGGGAATTGCAT+TGG	+	chr7_2:1295481-1295500	None:intergenic	30.0%
	GAATTGAGTGCTATAAGTAT+GGG	+	chr7_2:1295492-1295511	None:intergenic	30.0%
	AAGTGGCTATGAAATAATGA+AGG	+	chr7_2:1295575-1295594	None:intergenic	30.0%
!	TAATGAGTTGGACTGAATTA+TGG	-	chr7_2:1295964-1295983	Msa1043250:intron	30.0%
!	AAGTCTTATGTCACTAAGTA+GGG	+	chr7_2:1296013-1296032	None:intergenic	30.0%
	TATTTGATCATAACTTTCCG+TGG	+	chr7_2:1296523-1296542	None:intergenic	30.0%
	TTATATGGTTATGGTTGCAT+AGG	-	chr7_2:1296762-1296781	Msa1043250:intron	30.0%
!!	AAGTGATATTGATGGTTTTG+GGG	-	chr7_2:1297227-1297246	Msa1043250:five_prime_UTR	30.0%
	TAAATAGTTTCCATTGCCAT+AGG	+	chr7_2:1297264-1297283	None:intergenic	30.0%
	AGAAGGAAAGAAAAATGAGG+AGG	+	chr7_2:1294069-1294088	None:intergenic	35.0%
	TTCTTCAAAAGAAAGAAGGG+AGG	+	chr7_2:1294108-1294127	None:intergenic	35.0%
!!!	GATGCCGATTTCTTTTATGA+CGG	-	chr7_2:1294342-1294361	Msa1043250:CDS	35.0%
!!!	ATGCCGATTTCTTTTATGAC+GGG	-	chr7_2:1294343-1294362	Msa1043250:CDS	35.0%
	GATCCCGTCATAAAAGAAAT+CGG	+	chr7_2:1294349-1294368	None:intergenic	35.0%
	CTGAATGGGATTATCAAGTA+TGG	-	chr7_2:1294521-1294540	Msa1043250:intron	35.0%
	TTGATTCATCTGTGCTTCAT+TGG	-	chr7_2:1294550-1294569	Msa1043250:intron	35.0%
	TGATTCATCTGTGCTTCATT+GGG	-	chr7_2:1294551-1294570	Msa1043250:intron	35.0%
!	CATAGATGCCAAACAAGTTT+TGG	-	chr7_2:1294833-1294852	Msa1043250:intron	35.0%
	GCATAGCTCATTTACCTATA+TGG	-	chr7_2:1294860-1294879	Msa1043250:intron	35.0%
!!	ACCTATATGGTGTTGCATTA+AGG	-	chr7_2:1294873-1294892	Msa1043250:intron	35.0%
	AAGGAGAGTAGATTAGATGA+AGG	-	chr7_2:1295001-1295020	Msa1043250:intron	35.0%
	ATGAAGGATAGTCATATCCA+AGG	-	chr7_2:1295017-1295036	Msa1043250:intron	35.0%
!!	AACGATTCTGCGTTTTTCAA+CGG	+	chr7_2:1295154-1295173	None:intergenic	35.0%
	ATCGTTTGTATCGTTCGATT+CGG	-	chr7_2:1295168-1295187	Msa1043250:intron	35.0%
!	AGATTTGAGATCCAGAAATC+CGG	-	chr7_2:1295197-1295216	Msa1043250:intron	35.0%
	TTAGTAAGTGAAACGCAAAC+CGG	+	chr7_2:1295244-1295263	None:intergenic	35.0%
!	CTTACTAAAGACCAGGTTTT+CGG	-	chr7_2:1295256-1295275	Msa1043250:intron	35.0%
!	TTACTAAAGACCAGGTTTTC+GGG	-	chr7_2:1295257-1295276	Msa1043250:intron	35.0%
!!	AAAACGTTTTGGATGAATCC+GGG	+	chr7_2:1295294-1295313	None:intergenic	35.0%
	TCCAATACACCCATAAATCA+TGG	-	chr7_2:1295448-1295467	Msa1043250:intron	35.0%
	TCCATGATTTATGGGTGTAT+TGG	+	chr7_2:1295452-1295471	None:intergenic	35.0%
	GGTAAGGTTCCATGATTTAT+GGG	+	chr7_2:1295460-1295479	None:intergenic	35.0%
	TGGTAAGGTTCCATGATTTA+TGG	+	chr7_2:1295461-1295480	None:intergenic	35.0%
	GGAATTGAGTGCTATAAGTA+TGG	+	chr7_2:1295493-1295512	None:intergenic	35.0%
	TTGTAGTCTGCAGAACTAAT+GGG	+	chr7_2:1295551-1295570	None:intergenic	35.0%
	ATTGTAGTCTGCAGAACTAA+TGG	+	chr7_2:1295552-1295571	None:intergenic	35.0%
	AGAACAGAACAAAGGGAAAA+TGG	+	chr7_2:1295612-1295631	None:intergenic	35.0%
	GTGTTTGAGAACAGAACAAA+GGG	+	chr7_2:1295619-1295638	None:intergenic	35.0%
	TGTGTTTGAGAACAGAACAA+AGG	+	chr7_2:1295620-1295639	None:intergenic	35.0%
	TACCTTGGTCATATCACTAA+AGG	-	chr7_2:1295887-1295906	Msa1043250:intron	35.0%
!	CAAGTCTTATGTCACTAAGT+AGG	+	chr7_2:1296014-1296033	None:intergenic	35.0%
	CTACTTAGTGACATAAGACT+TGG	-	chr7_2:1296012-1296031	Msa1043250:intron	35.0%
	GACTTTAGTACCTACTACTT+AGG	+	chr7_2:1296212-1296231	None:intergenic	35.0%
	TACTAAAGTCCTTCATCATG+TGG	-	chr7_2:1296222-1296241	Msa1043250:intron	35.0%
	AAAATCCTACCACATGATGA+AGG	+	chr7_2:1296234-1296253	None:intergenic	35.0%
	GGGAAAATATATGTTGAGTG+AGG	-	chr7_2:1296274-1296293	Msa1043250:intron	35.0%
!!	CTCATAAGAGGCATTGTAAA+GGG	+	chr7_2:1296859-1296878	None:intergenic	35.0%
!!	TCTCATAAGAGGCATTGTAA+AGG	+	chr7_2:1296860-1296879	None:intergenic	35.0%
	CAATAACTAACACCATACCA+TGG	+	chr7_2:1297011-1297030	None:intergenic	35.0%
	ATTGAGATCAGAGATCTGAA+AGG	+	chr7_2:1297042-1297061	None:intergenic	35.0%
	CTGAGTATACTGAACTTGAA+GGG	-	chr7_2:1297095-1297114	Msa1043250:CDS	35.0%
	AAAGAAAAATGAGGAGGAGG+AGG	+	chr7_2:1294063-1294082	None:intergenic	40.0%
	AGGAAAGAAAAATGAGGAGG+AGG	+	chr7_2:1294066-1294085	None:intergenic	40.0%
	AGAGGGTGGATGGAAATTTA+GGG	+	chr7_2:1294177-1294196	None:intergenic	40.0%
	ATCTTTCACATTCTCATCGG+AGG	-	chr7_2:1294258-1294277	Msa1043250:CDS	40.0%
!	TTTATGACGGGATCGATTGT+AGG	-	chr7_2:1294355-1294374	Msa1043250:CDS	40.0%
!	TTATGACGGGATCGATTGTA+GGG	-	chr7_2:1294356-1294375	Msa1043250:CDS	40.0%
	AGAAGTGAAGACAAGAGAAG+CGG	-	chr7_2:1294393-1294412	Msa1043250:CDS	40.0%
	TAACGCTATTGCTGCTGAAT+GGG	-	chr7_2:1294507-1294526	Msa1043250:intron	40.0%
	GCCTTAATGCAACACCATAT+AGG	+	chr7_2:1294877-1294896	None:intergenic	40.0%
	TTGTTTGTCCAACTCCAAAC+AGG	+	chr7_2:1294899-1294918	None:intergenic	40.0%
!	GATTTGAGATCCAGAAATCC+GGG	-	chr7_2:1295198-1295217	Msa1043250:intron	40.0%
	TAGTAAGTGAAACGCAAACC+GGG	+	chr7_2:1295243-1295262	None:intergenic	40.0%
	CGTTTCACTTACTAAAGACC+AGG	-	chr7_2:1295249-1295268	Msa1043250:intron	40.0%
!	GTATGGGAATTGCATTGGTA+AGG	+	chr7_2:1295476-1295495	None:intergenic	40.0%
	TGTAGTCTGCAGAACTAATG+GGG	+	chr7_2:1295550-1295569	None:intergenic	40.0%
	TCGAGATCCTAAGTAAGATC+GGG	+	chr7_2:1295860-1295879	None:intergenic	40.0%
	CTCGAGATCCTAAGTAAGAT+CGG	+	chr7_2:1295861-1295880	None:intergenic	40.0%
	TGCCTTTAGTGATATGACCA+AGG	+	chr7_2:1295892-1295911	None:intergenic	40.0%
	ACTAAGTAGGGTCAGTTACA+TGG	+	chr7_2:1296001-1296020	None:intergenic	40.0%
	CAAAAGAGGTCCTAAGTAGT+AGG	-	chr7_2:1296199-1296218	Msa1043250:intron	40.0%
	AAAGTCCTTCATCATGTGGT+AGG	-	chr7_2:1296226-1296245	Msa1043250:intron	40.0%
!	TTTTCCCATACACATAGCCA+GGG	+	chr7_2:1296261-1296280	None:intergenic	40.0%
!	ATTTTCCCATACACATAGCC+AGG	+	chr7_2:1296262-1296281	None:intergenic	40.0%
	AATAAATCCAAGTTGCCTCG+AGG	-	chr7_2:1296312-1296331	Msa1043250:intron	40.0%
	ATAAATCCAAGTTGCCTCGA+GGG	-	chr7_2:1296313-1296332	Msa1043250:intron	40.0%
!!	TCTTGGCATATTTGCTGTTG+CGG	-	chr7_2:1296593-1296612	Msa1043250:intron	40.0%
	TTAGGTCCCTTAACTGTCAT+TGG	-	chr7_2:1296698-1296717	Msa1043250:intron	40.0%
!!	ATAATTTTGGGCCTTGTCAC+AGG	+	chr7_2:1296910-1296929	None:intergenic	40.0%
	TGTATTTCGTCAGGCAATCA+CGG	+	chr7_2:1297073-1297092	None:intergenic	40.0%
	TACTCAGCATGTATTTCGTC+AGG	+	chr7_2:1297082-1297101	None:intergenic	40.0%
	GCTGAGTATACTGAACTTGA+AGG	-	chr7_2:1297094-1297113	Msa1043250:CDS	40.0%
!!!	ATTGATGGTTTTGGGGTCAT+AGG	-	chr7_2:1297234-1297253	Msa1043250:five_prime_UTR	40.0%
	GAGAGGGTGGATGGAAATTT+AGG	+	chr7_2:1294178-1294197	None:intergenic	45.0%
	AAGACAAGAGAAGCGGATGA+TGG	-	chr7_2:1294400-1294419	Msa1043250:CDS	45.0%
!	AGAGAAGCGGATGATGGTAA+TGG	-	chr7_2:1294406-1294425	Msa1043250:CDS	45.0%
!!	AAGCGGATGATGGTAATGGT+TGG	-	chr7_2:1294410-1294429	Msa1043250:CDS	45.0%
	GCAACAGTAGGAAGCTTAAG+CGG	+	chr7_2:1294481-1294500	None:intergenic	45.0%
	CTAACGCTATTGCTGCTGAA+TGG	-	chr7_2:1294506-1294525	Msa1043250:intron	45.0%
	AATATCCGTGCTTCACGGTT+TGG	+	chr7_2:1294687-1294706	None:intergenic	45.0%
	GTGTCAATATCCGTGCTTCA+CGG	+	chr7_2:1294692-1294711	None:intergenic	45.0%
	TGAAGCACGGATATTGACAC+CGG	-	chr7_2:1294692-1294711	Msa1043250:intron	45.0%
	GCACAGACACTCCTCAAATT+AGG	+	chr7_2:1294811-1294830	None:intergenic	45.0%
	GTGTTGCATTAAGGCCTGTT+TGG	-	chr7_2:1294882-1294901	Msa1043250:intron	45.0%
!	CATTAAGGCCTGTTTGGAGT+TGG	-	chr7_2:1294888-1294907	Msa1043250:intron	45.0%
	AAGTCGTCGGAATCGGAAAT+TGG	-	chr7_2:1295110-1295129	Msa1043250:intron	45.0%
!!!	TAAAGACCAGGTTTTCGGGT+CGG	-	chr7_2:1295261-1295280	Msa1043250:intron	45.0%
	GTAGTCTGCAGAACTAATGG+GGG	+	chr7_2:1295549-1295568	None:intergenic	45.0%
	TGAATCGGAGGATCGTAACA+CGG	+	chr7_2:1295820-1295839	None:intergenic	45.0%
	GATCCTAAGTAAGATCGGGT+AGG	+	chr7_2:1295856-1295875	None:intergenic	45.0%
	GATCTCGAGTTTGTCTACCT+TGG	-	chr7_2:1295872-1295891	Msa1043250:intron	45.0%
!	GTGGTAGGATTTTCTATCCC+TGG	-	chr7_2:1296241-1296260	Msa1043250:intron	45.0%
	TCTATCCCTGGCTATGTGTA+TGG	-	chr7_2:1296253-1296272	Msa1043250:intron	45.0%
	CTATCCCTGGCTATGTGTAT+GGG	-	chr7_2:1296254-1296273	Msa1043250:intron	45.0%
	TAAATCCAAGTTGCCTCGAG+GGG	-	chr7_2:1296314-1296333	Msa1043250:intron	45.0%
	AGTTGCATGTGGGGATACTT+TGG	-	chr7_2:1296347-1296366	Msa1043250:intron	45.0%
	GCATTGAAACCTCACTACCA+CGG	-	chr7_2:1296503-1296522	Msa1043250:intron	45.0%
!	CATAACTTTCCGTGGTAGTG+AGG	+	chr7_2:1296515-1296534	None:intergenic	45.0%
	GTGCAAGCAAGTCTCATAAG+AGG	+	chr7_2:1296871-1296890	None:intergenic	45.0%
!	ATACTGAACTTGAAGGGTGC+TGG	-	chr7_2:1297101-1297120	Msa1043250:CDS	45.0%
!!	TACTGAACTTGAAGGGTGCT+GGG	-	chr7_2:1297102-1297121	Msa1043250:CDS	45.0%
!!!	TATATATGAATTTTTAAATT+TGG	-	chr7_2:1295780-1295799	Msa1043250:intron	5.0%
	GAGGAGGAGGAGGATAGTTT+GGG	+	chr7_2:1294041-1294060	None:intergenic	50.0%
	GAAAAATGAGGAGGAGGAGG+AGG	+	chr7_2:1294060-1294079	None:intergenic	50.0%
	AGATGATGACTGCTCCTCGT+CGG	+	chr7_2:1294242-1294261	None:intergenic	50.0%
	CGGGATCGATTGTAGGGAAA+AGG	-	chr7_2:1294362-1294381	Msa1043250:CDS	50.0%
	AGCTTAAGCGGTCTCTTAGC+AGG	+	chr7_2:1294469-1294488	None:intergenic	50.0%
	GCGTTAGCAAGAGCAACAGT+AGG	+	chr7_2:1294493-1294512	None:intergenic	50.0%
	GAATGCCAAACCGTGAAGCA+CGG	-	chr7_2:1294679-1294698	Msa1043250:intron	50.0%
	TCCTCAAATTAGGCGTGTCC+CGG	+	chr7_2:1294801-1294820	None:intergenic	50.0%
	GATCGCGAGTTTGTCTACCT+TGG	+	chr7_2:1295037-1295056	None:intergenic	50.0%
	AAACTCGCGATCCAACTCGT+AGG	-	chr7_2:1295045-1295064	Msa1043250:intron	50.0%
	GGGAGGTGAGATCGTAAACT+CGG	+	chr7_2:1295076-1295095	None:intergenic	50.0%
	TTCCGATTCCGACGACTTTC+CGG	+	chr7_2:1295108-1295127	None:intergenic	50.0%
	TCGTCGGAATCGGAAATTGG+TGG	-	chr7_2:1295113-1295132	Msa1043250:intron	50.0%
!	GAATCGGAAATTGGTGGTCG+CGG	-	chr7_2:1295119-1295138	Msa1043250:intron	50.0%
!!!	AAAGACCAGGTTTTCGGGTC+GGG	-	chr7_2:1295262-1295281	Msa1043250:intron	50.0%
	TCCTCCGATTCACGATCTCA+TGG	-	chr7_2:1295828-1295847	Msa1043250:intron	50.0%
	CCTCCGATTCACGATCTCAT+GGG	-	chr7_2:1295829-1295848	Msa1043250:intron	50.0%
	GGACCCATGAGATCGTGAAT+CGG	+	chr7_2:1295835-1295854	None:intergenic	50.0%
	GGTCCTACCCGATCTTACTT+AGG	-	chr7_2:1295850-1295869	Msa1043250:intron	50.0%
	TTAGCGTCGCAGTTGCATGT+GGG	-	chr7_2:1296337-1296356	Msa1043250:intron	50.0%
!	ACAATCGGTTCAGCTGCAGT+TGG	-	chr7_2:1296542-1296561	Msa1043250:intron	50.0%
!	CAATCGGTTCAGCTGCAGTT+GGG	-	chr7_2:1296543-1296562	Msa1043250:intron	50.0%
!	AATCGGTTCAGCTGCAGTTG+GGG	-	chr7_2:1296544-1296563	Msa1043250:intron	50.0%
	TTGCTTGCACTGCCTTGGAA+AGG	-	chr7_2:1296881-1296900	Msa1043250:CDS	50.0%
	TGCTTGCACTGCCTTGGAAA+GGG	-	chr7_2:1296882-1296901	Msa1043250:CDS	50.0%
	TGTCACAGGAACCCTTTCCA+AGG	+	chr7_2:1296896-1296915	None:intergenic	50.0%
	TGGAAAGGGTTCCTGTGACA+AGG	-	chr7_2:1296896-1296915	Msa1043250:CDS	50.0%
	GTTCACTGTCATCAGGAGCA+CGG	+	chr7_2:1296975-1296994	None:intergenic	50.0%
	CTTGCGAGTTCACTGTCATC+AGG	+	chr7_2:1296982-1297001	None:intergenic	50.0%
	TGACAGTGAACTCGCAAGCT+TGG	-	chr7_2:1296984-1297003	Msa1043250:CDS	50.0%
!!	ACTGAACTTGAAGGGTGCTG+GGG	-	chr7_2:1297103-1297122	Msa1043250:CDS	50.0%
	CATAGGCTTGCCTATGGCAA+TGG	-	chr7_2:1297251-1297270	Msa1043250:five_prime_UTR	50.0%
	GGAGGAGGAGGAGGATAGTT+TGG	+	chr7_2:1294042-1294061	None:intergenic	55.0%
	AAATGAGGAGGAGGAGGAGG+AGG	+	chr7_2:1294057-1294076	None:intergenic	55.0%
!	CCACCTGAAATCACCGACTG+CGG	-	chr7_2:1294291-1294310	Msa1043250:CDS	55.0%
	GAGGCGTAAACTGTCGTCGT+CGG	-	chr7_2:1294315-1294334	Msa1043250:CDS	55.0%
	CGGATATTGACACCGGACAC+TGG	-	chr7_2:1294699-1294718	Msa1043250:intron	55.0%
	TGTGTCAGCATGCCAGTGTC+CGG	+	chr7_2:1294714-1294733	None:intergenic	55.0%
	AAGTGTCACGTGTCCGACAC+CGG	-	chr7_2:1294779-1294798	Msa1043250:intron	55.0%
	AATTAGGCGTGTCCCGGTGT+CGG	+	chr7_2:1294795-1294814	None:intergenic	55.0%
	ACCGGGACACGCCTAATTTG+AGG	-	chr7_2:1294797-1294816	Msa1043250:intron	55.0%
	ACTCGGACGATCCTACGAGT+TGG	+	chr7_2:1295059-1295078	None:intergenic	55.0%
	ATTCCGACGACTTTCCGGCA+CGG	+	chr7_2:1295103-1295122	None:intergenic	55.0%
	TGCCGGAAAGTCGTCGGAAT+CGG	-	chr7_2:1295103-1295122	Msa1043250:intron	55.0%
!	GGAAATTGGTGGTCGCGGTT+TGG	-	chr7_2:1295124-1295143	Msa1043250:intron	55.0%
	GATCCAGAAATCCGGGTTCG+CGG	-	chr7_2:1295205-1295224	Msa1043250:intron	55.0%
	ATCCAGAAATCCGGGTTCGC+GGG	-	chr7_2:1295206-1295225	Msa1043250:intron	55.0%
	CCCATGAGATCGTGAATCGG+AGG	+	chr7_2:1295832-1295851	None:intergenic	55.0%
	GTTAGCGTCGCAGTTGCATG+TGG	-	chr7_2:1296336-1296355	Msa1043250:intron	55.0%
	TAGCGTCGCAGTTGCATGTG+GGG	-	chr7_2:1296338-1296357	Msa1043250:intron	55.0%
!	GAGACTTGCTTGCACTGCCT+TGG	-	chr7_2:1296876-1296895	Msa1043250:CDS	55.0%
	GAACTCGCAAGCTTGGTCCA+TGG	-	chr7_2:1296991-1297010	Msa1043250:CDS	55.0%
	CGCAAGCTTGGTCCATGGTA+TGG	-	chr7_2:1296996-1297015	Msa1043250:CDS	55.0%
	TGGGGTCATAGGCTTGCCTA+TGG	-	chr7_2:1297245-1297264	Msa1043250:five_prime_UTR	55.0%
	CATCCACCCTCTCAGCTCAC+CGG	-	chr7_2:1294185-1294204	Msa1043250:three_prime_UTR	60.0%
	GACACTCCGGTGAGCTGAGA+GGG	+	chr7_2:1294194-1294213	None:intergenic	60.0%
!	TCTCAGCTCACCGGAGTGTC+CGG	-	chr7_2:1294194-1294213	Msa1043250:three_prime_UTR	60.0%
	AGCCAAAACGCCGGACACTC+CGG	+	chr7_2:1294207-1294226	None:intergenic	60.0%
	CCGCAGTCGGTGATTTCAGG+TGG	+	chr7_2:1294294-1294313	None:intergenic	60.0%
	TCGCCGCAGTCGGTGATTTC+AGG	+	chr7_2:1294297-1294316	None:intergenic	60.0%
!	TGAAATCACCGACTGCGGCG+AGG	-	chr7_2:1294296-1294315	Msa1043250:CDS	60.0%
	AGTTTACGCCTCGCCGCAGT+CGG	+	chr7_2:1294307-1294326	None:intergenic	60.0%
	AGTGTCACGTGTCCGACACC+GGG	-	chr7_2:1294780-1294799	Msa1043250:intron	60.0%
	ACGACTTTCCGGCACGGCAA+GGG	+	chr7_2:1295097-1295116	None:intergenic	60.0%
	TTGCCGTGCCGGAAAGTCGT+CGG	-	chr7_2:1295097-1295116	Msa1043250:intron	60.0%
	AGAAATCCGGGTTCGCGGGT+CGG	-	chr7_2:1295210-1295229	Msa1043250:intron	60.0%
	CAAGACCCGACCCGAAAACC+TGG	+	chr7_2:1295270-1295289	None:intergenic	60.0%
!	TTTCGGGTCGGGTCTTGACC+CGG	-	chr7_2:1295273-1295292	Msa1043250:intron	60.0%
	GCTAACCCCTCGAGGCAACT+TGG	+	chr7_2:1296322-1296341	None:intergenic	60.0%
	AGCTGCAGTTGGGGTCGCAA+AGG	-	chr7_2:1296553-1296572	Msa1043250:intron	60.0%
	TGAGGAGGAGGAGGAGGAGG+AGG	+	chr7_2:1294054-1294073	None:intergenic	65.0%
	CGGTGAGCTGAGAGGGTGGA+TGG	+	chr7_2:1294187-1294206	None:intergenic	65.0%
	ACTCCGGTGAGCTGAGAGGG+TGG	+	chr7_2:1294191-1294210	None:intergenic	65.0%
	GGACACTCCGGTGAGCTGAG+AGG	+	chr7_2:1294195-1294214	None:intergenic	65.0%
!!	CACCGGAGTGTCCGGCGTTT+TGG	-	chr7_2:1294202-1294221	Msa1043250:three_prime_UTR	65.0%
!!!	TGTCCGGCGTTTTGGCTCCG+CGG	-	chr7_2:1294210-1294229	Msa1043250:three_prime_UTR	65.0%
	CGACTTTCCGGCACGGCAAG+GGG	+	chr7_2:1295096-1295115	None:intergenic	65.0%
	GACGACTTTCCGGCACGGCA+AGG	+	chr7_2:1295098-1295117	None:intergenic	65.0%
	GACCCGCGAACCCGGATTTC+TGG	+	chr7_2:1295211-1295230	None:intergenic	65.0%
	ACTGCGACGCTAACCCCTCG+AGG	+	chr7_2:1296330-1296349	None:intergenic	65.0%
	GGAGGAGGAGGAGGAGGAGG+AGG	+	chr7_2:1294048-1294067	None:intergenic	70.0%
	CTCACCTCCCCTTGCCGTGC+CGG	-	chr7_2:1295086-1295105	Msa1043250:intron	70.0%
	CTTTCCGGCACGGCAAGGGG+AGG	+	chr7_2:1295093-1295112	None:intergenic	70.0%
	CGAGAACCGACCCGCGAACC+CGG	+	chr7_2:1295219-1295238	None:intergenic	70.0%
!	TCGCGGGTCGGTTCTCGACC+CGG	-	chr7_2:1295222-1295241	Msa1043250:intron	70.0%
	CCGCCGCGGAGCCAAAACGC+CGG	+	chr7_2:1294216-1294235	None:intergenic	75.0%
!!!	CCGGCGTTTTGGCTCCGCGG+CGG	-	chr7_2:1294213-1294232	Msa1043250:three_prime_UTR	75.0%
!!!	GCGTTTTGGCTCCGCGGCGG+CGG	-	chr7_2:1294216-1294235	Msa1043250:three_prime_UTR	75.0%
!	CTCCTCGTCGGCCGCCGCCG+CGG	+	chr7_2:1294230-1294249	None:intergenic	85.0%
!	CTCCGCGGCGGCGGCCGACG+AGG	-	chr7_2:1294225-1294244	Msa1043250:three_prime_UTR	90.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	1294033	1297304	1294033	ID=Msa1043250;Name=Msa1043250
chr7_2	mRNA	1294033	1297304	1294033	ID=Msa1043250-mRNA-1;Parent=Msa1043250;Name=Msa1043250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=100\|1\|1\|1\|1\|1\|2\|221\|216
chr7_2	exon	1294033	1294499	1294033	ID=Msa1043250-mRNA-1:exon:228;Parent=Msa1043250-mRNA-1
chr7_2	exon	1296800	1297304	1296800	ID=Msa1043250-mRNA-1:exon:227;Parent=Msa1043250-mRNA-1
chr7_2	five_prime_UTR	1297205	1297304	1297205	ID=Msa1043250-mRNA-1:five_prime_utr;Parent=Msa1043250-mRNA-1
chr7_2	CDS	1296800	1297204	1296800	ID=Msa1043250-mRNA-1:cds;Parent=Msa1043250-mRNA-1
chr7_2	CDS	1294254	1294499	1294254	ID=Msa1043250-mRNA-1:cds;Parent=Msa1043250-mRNA-1
chr7_2	three_prime_UTR	1294033	1294253	1294033	ID=Msa1043250-mRNA-1:three_prime_utr;Parent=Msa1043250-mRNA-1

Gene Sequence

>Msa1043250

ATGGCTCACTCATTAATAAAAAATTCAATCAAATCAATAAACCCTAAATTTCCATCCACCCTCTCAGCTCACCGGAGTGTCCGGCGTTTTGGCTCCGCGGCGGCGGCCGACGAGGAGCAGTCATCATCTTTCACATTCTCATCGGAGGCAGACAACATCCACCTGAAATCACCGACTGCGGCGAGGCGTAAACTGTCGTCGTCGGTGACGATGCCGATTTCTTTTATGACGGGATCGATTGTAGGGAAAAGGTTTTACAAAGAAGTGAAGACAAGAGAAGCGGATGATGGTAATGGTTGGACTGTGATGCTTGATTATAGAACGCTTAAGACTCCTGCTAAGAGACCGCTTAAGCTTCCTACTGTTGCTCTTGCTAACGCTATTGCTGCTGAATGGGATTATCAACAAATAGATGGCATAAGACCCTTTACAATGCCTCTTATGAGACTTGCTTGCACTGCCTTGGAAAGGGTTCCTGTGACAAGGCCCAAAATTATTGAGCATTTGATGAAGAAATTTAATCAAGATTTAGTATTTTGCCGTGCTCCTGATGACAGTGAACTCGCAAGCTTGGTCCATGGTATGGTGTTAGTTATTGTGATATTTCCTTTCAGATCTCTGATCTCAATTAATAACACCGTGATTGCCTGA

Protein sequence

>Msa1043250

MAHSLIKNSIKSINPKFPSTLSAHRSVRRFGSAAAADEEQSSSFTFSSEADNIHLKSPTAARRKLSSSVTMPISFMTGSIVGKRFYKEVKTREADDGNGWTVMLDYRTLKTPAKRPLKLPTVALANAIAAEWDYQQIDGIRPFTMPLMRLACTALERVPVTRPKIIEHLMKKFNQDLVFCRAPDDSELASLVHGMVLVIVIFPFRSLISINNTVIA*