Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364670 | XP_013449251.1 | 92.347 | 392 | 29 | 1 | 1 | 391 | 1 | 392 | 0.0 | 669 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364670 | A0A072U258 | 92.347 | 392 | 29 | 1 | 1 | 391 | 1 | 392 | 0.0 | 669 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011720 | Msa1364670 | 0.812446 | 4.221656e-51 | -8.615850e-47 |
| Msa0060600 | Msa1364670 | 0.815382 | 9.512287e-52 | -8.615850e-47 |
| Msa0087110 | Msa1364670 | 0.825930 | 3.582270e-54 | -8.615850e-47 |
| Msa0105340 | Msa1364670 | 0.842625 | 2.306969e-58 | -8.615850e-47 |
| Msa0605230 | Msa1364670 | 0.808939 | 2.420321e-50 | -8.615850e-47 |
| Msa0617370 | Msa1364670 | 0.805644 | 1.208680e-49 | -8.615850e-47 |
| Msa0641450 | Msa1364670 | 0.820699 | 5.973983e-53 | -8.615850e-47 |
| Msa0656680 | Msa1364670 | 0.800768 | 1.234332e-48 | -8.615850e-47 |
| Msa0688550 | Msa1364670 | 0.804906 | 1.724778e-49 | -8.615850e-47 |
| Msa0726610 | Msa1364670 | 0.813935 | 1.989414e-51 | -8.615850e-47 |
| Msa0750380 | Msa1364670 | 0.807076 | 6.029882e-50 | -8.615850e-47 |
| Msa0130390 | Msa1364670 | 0.806501 | 7.978690e-50 | -8.615850e-47 |
| Msa0203640 | Msa1364670 | 0.802245 | 6.148530e-49 | -8.615850e-47 |
| Msa1252070 | Msa1364670 | 0.851152 | 1.069057e-60 | -8.615850e-47 |
| Msa1272130 | Msa1364670 | 0.812092 | 5.045863e-51 | -8.615850e-47 |
| Msa1292730 | Msa1364670 | 0.803023 | 4.247499e-49 | -8.615850e-47 |
| Msa1308480 | Msa1364670 | 0.803817 | 2.908599e-49 | -8.615850e-47 |
| Msa0449760 | Msa1364670 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
| Msa0980440 | Msa1364670 | 0.816160 | 6.380748e-52 | -8.615850e-47 |
| Msa1026720 | Msa1364670 | 0.802898 | 4.509855e-49 | -8.615850e-47 |
| Msa1056640 | Msa1364670 | 0.815181 | 1.054439e-51 | -8.615850e-47 |
| Msa1074610 | Msa1364670 | 0.971169 | 9.658978e-133 | -8.615850e-47 |
| Msa1208810 | Msa1364670 | 0.805871 | 1.082757e-49 | -8.615850e-47 |
| Msa0501470 | Msa1364670 | 0.802178 | 6.345283e-49 | -8.615850e-47 |
| Msa0514990 | Msa1364670 | 0.806026 | 1.004515e-49 | -8.615850e-47 |
| Msa0516310 | Msa1364670 | 0.817743 | 2.815157e-52 | -8.615850e-47 |
| Msa0540320 | Msa1364670 | 0.803760 | 2.988705e-49 | -8.615850e-47 |
| Msa0563140 | Msa1364670 | 0.802538 | 5.349830e-49 | -8.615850e-47 |
| Msa0853170 | Msa1364670 | 0.800920 | 1.149131e-48 | -8.615850e-47 |
| Msa0903730 | Msa1364670 | 0.817749 | 2.805850e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364670 | MtrunA17_Chr7g0245011 | 92.347 | 392 | 29 | 1 | 1 | 391 | 1 | 392 | 0.0 | 669 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364670 | AT2G38570.1 | 53.381 | 281 | 101 | 5 | 72 | 350 | 46 | 298 | 3.03e-80 | 249 |
| Msa1364670 | AT2G38570.2 | 53.275 | 229 | 78 | 4 | 72 | 298 | 46 | 247 | 3.12e-65 | 209 |
Find 121 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAGATCAAATTTGCTTTC+TGG | 0.156486 | tig0018182:+24130 | Msa1364670:CDS |
| GATGATAAAGTTGAGAAATT+TGG | 0.218043 | tig0018182:+23852 | Msa1364670:CDS |
| TACAATTTCAGCATCAATTC+AGG | 0.265802 | tig0018182:+27035 | Msa1364670:CDS |
| GGGATTTGTCTCACAGCTTT+GGG | 0.269763 | tig0018182:+23968 | Msa1364670:CDS |
| TATTCAATCTGCTCTTAGTT+TGG | 0.274965 | tig0018182:+23947 | Msa1364670:CDS |
| GACTCAAAGGAGAACAATTT+CGG | 0.276103 | tig0018182:+23657 | Msa1364670:CDS |
| GGGATAATAATGAAGATAAC+TGG | 0.295526 | tig0018182:+28849 | Msa1364670:CDS |
| TGGGATTTGTCTCACAGCTT+TGG | 0.298018 | tig0018182:+23967 | Msa1364670:CDS |
| CCACCGAGATTCCCACATTC+TGG | 0.319896 | tig0018182:-28727 | None:intergenic |
| ATCCATCATTCCATCAAGTT+TGG | 0.320274 | tig0018182:+27094 | Msa1364670:CDS |
| TCAGATCAAATTTGCTTTCT+GGG | 0.326145 | tig0018182:+24131 | Msa1364670:CDS |
| AAAAGGAAATTGGGTTGAAT+TGG | 0.329798 | tig0018182:-23503 | None:intergenic |
| AATTGGGTTGAATTGGGTTC+TGG | 0.336463 | tig0018182:-23496 | None:intergenic |
| ACTGTTGTTGCCACTGGTTT+TGG | 0.341241 | tig0018182:-23547 | None:intergenic |
| ATTCAATCTGCTCTTAGTTT+GGG | 0.344663 | tig0018182:+23948 | Msa1364670:CDS |
| TTGGAGAGTTTGGGTGAAAA+GGG | 0.344728 | tig0018182:-23528 | None:intergenic |
| ACTCAAAGGAGAACAATTTC+GGG | 0.344948 | tig0018182:+23658 | Msa1364670:CDS |
| TTATCCCACTCTCTTGGATT+GGG | 0.350574 | tig0018182:-28833 | None:intergenic |
| GGTGAGTACCTACTCTTTGA+TGG | 0.353137 | tig0018182:+27759 | Msa1364670:intron |
| TGGAGATTCTGCAGCTGAAA+TGG | 0.355326 | tig0018182:-23436 | None:intergenic |
| ATTATCCCACTCTCTTGGAT+TGG | 0.363237 | tig0018182:-28834 | None:intergenic |
| GGGAGAAGATGATTTGATTC+CGG | 0.369267 | tig0018182:+23782 | Msa1364670:CDS |
| GTTAGACCCATCAGTTTCAT+TGG | 0.370384 | tig0018182:-23700 | None:intergenic |
| GAACTTGAGATAGACTCATT+TGG | 0.377272 | tig0018182:+27068 | Msa1364670:CDS |
| CTCAAGGTCCAATGGAAATC+CGG | 0.384169 | tig0018182:+23587 | Msa1364670:CDS |
| TGGAAACAGTGCGAATGAAT+TGG | 0.385151 | tig0018182:+23761 | Msa1364670:CDS |
| AAAGGAAATTGGGTTGAATT+GGG | 0.386654 | tig0018182:-23502 | None:intergenic |
| TTTGGAGAGTTTGGGTGAAA+AGG | 0.391973 | tig0018182:-23529 | None:intergenic |
| TGGGGATGTTGTCCTTGTTC+CGG | 0.393964 | tig0018182:+24822 | Msa1364670:CDS |
| TCAAGGAGAAGGAAAGGTTT+TGG | 0.395585 | tig0018182:+28800 | Msa1364670:CDS |
| ACCTCTAATCTCACGGTCTT+CGG | 0.399588 | tig0018182:+28888 | Msa1364670:exon |
| TCATTATTATCCCACTCTCT+TGG | 0.419548 | tig0018182:-28839 | None:intergenic |
| AAACCACTTACCAAACTTGA+TGG | 0.422700 | tig0018182:-27104 | None:intergenic |
| GCCGAAGACCGTGAGATTAG+AGG | 0.429906 | tig0018182:-28889 | None:intergenic |
| GATTAGAAGGTCGAATTTGT+TGG | 0.433804 | tig0018182:+23908 | Msa1364670:CDS |
| ACGCCCTCTCTACGAAATAT+CGG | 0.437034 | tig0018182:+26903 | Msa1364670:CDS |
| TTACAACGAACTTCAATTTG+AGG | 0.440441 | tig0018182:+23635 | Msa1364670:CDS |
| AAACATATGGTCGTGTTTCA+AGG | 0.443146 | tig0018182:+28783 | Msa1364670:CDS |
| TTTCTTTGAAACTTATGAGC+AGG | 0.446077 | tig0018182:-28977 | None:intergenic |
| GACAACGAATATAATATGAT+TGG | 0.446758 | tig0018182:+24859 | Msa1364670:CDS |
| TTGATTCCGGTTCGTGGTGA+TGG | 0.450936 | tig0018182:+23795 | Msa1364670:CDS |
| CGAATATAATATGATTGGAT+TGG | 0.451497 | tig0018182:+24864 | Msa1364670:CDS |
| GGAAACAGTGCGAATGAATT+GGG | 0.451731 | tig0018182:+23762 | Msa1364670:CDS |
| GAGGTAAACAAGTGATTAGA+AGG | 0.458082 | tig0018182:+23895 | Msa1364670:CDS |
| CAATTTCGGGTTAGAGTTGG+AGG | 0.462719 | tig0018182:+23671 | Msa1364670:CDS |
| TCTGAACAATCTGAAACATA+TGG | 0.463194 | tig0018182:+28770 | Msa1364670:CDS |
| TTGTCTATTACACTTTCATC+CGG | 0.471680 | tig0018182:-24841 | None:intergenic |
| GAAAATGATGACAAGGAAAG+TGG | 0.472834 | tig0018182:+23741 | Msa1364670:CDS |
| GATGATTTGATTCCGGTTCG+TGG | 0.483272 | tig0018182:+23789 | Msa1364670:CDS |
| TGACCCCTTGATGGTGGACC+CGG | 0.486590 | tig0018182:-23606 | None:intergenic |
| TACCTACTCTTTGATGGTTG+AGG | 0.486657 | tig0018182:+27765 | Msa1364670:CDS |
| CCTTCTTGAGGATATCAGTC+AGG | 0.488547 | tig0018182:+24168 | Msa1364670:CDS |
| GGAAACACTGTTGTTGCCAC+TGG | 0.490360 | tig0018182:-23553 | None:intergenic |
| CCTTTATACTCCTAAAACTA+CGG | 0.492574 | tig0018182:+28911 | Msa1364670:three_prime_UTR |
| GAACAATTTCGGGTTAGAGT+TGG | 0.493761 | tig0018182:+23668 | Msa1364670:CDS |
| GATGGAGATGGAAATGATGA+TGG | 0.497036 | tig0018182:+23813 | Msa1364670:CDS |
| TACCAAACTTGATGGAATGA+TGG | 0.497581 | tig0018182:-27096 | None:intergenic |
| CCATCTCCATCACCACGAAC+CGG | 0.497998 | tig0018182:-23801 | None:intergenic |
| TTTCCGCAGCGTTGAGCTCA+AGG | 0.499300 | tig0018182:+23571 | Msa1364670:CDS |
| GATAAAGTTGAGAAATTTGG+TGG | 0.500262 | tig0018182:+23855 | Msa1364670:CDS |
| TGGTGGACCCGGATTTCCAT+TGG | 0.503994 | tig0018182:-23595 | None:intergenic |
| GGAGAGTTTGGGTGAAAAGG+GGG | 0.506597 | tig0018182:-23526 | None:intergenic |
| GAAATCCGGGTCCACCATCA+AGG | 0.507624 | tig0018182:+23601 | Msa1364670:CDS |
| AGAAACCCAATCCAAGAGAG+TGG | 0.508071 | tig0018182:+28828 | Msa1364670:CDS |
| AGATAACTGGGAGCTTCCTA+TGG | 0.511048 | tig0018182:+28862 | Msa1364670:CDS |
| TGGAGAGTTTGGGTGAAAAG+GGG | 0.511580 | tig0018182:-23527 | None:intergenic |
| ATCTTAACTCTTAGGTGCGT+GGG | 0.516746 | tig0018182:+27012 | Msa1364670:intron |
| CAACCAGAATGTGGGAATCT+CGG | 0.518447 | tig0018182:+28724 | Msa1364670:CDS |
| TAAAAGCTATGACCCCTTGA+TGG | 0.519756 | tig0018182:-23615 | None:intergenic |
| TTCTTTGAAACTTATGAGCA+GGG | 0.522786 | tig0018182:-28976 | None:intergenic |
| CGTGTTTCAAGGAGAAGGAA+AGG | 0.527816 | tig0018182:+28794 | Msa1364670:CDS |
| GTGGATGGTCTTGTTTGTAG+AGG | 0.529803 | tig0018182:+24108 | Msa1364670:intron |
| GGTTGTGTATGAATTGAGAA+AGG | 0.532074 | tig0018182:-23466 | None:intergenic |
| ATTTGTCTCACAGCTTTGGG+TGG | 0.536573 | tig0018182:+23971 | Msa1364670:CDS |
| ACGAATACAAAGGCTTTCCA+AGG | 0.540261 | tig0018182:+27840 | Msa1364670:CDS |
| CCGGTTCGTGGTGATGGAGA+TGG | 0.540807 | tig0018182:+23801 | Msa1364670:CDS |
| TACTCCTAAAACTACGGCAA+TGG | 0.542341 | tig0018182:+28917 | Msa1364670:three_prime_UTR |
| GTTGTGTATGAATTGAGAAA+GGG | 0.546079 | tig0018182:-23465 | None:intergenic |
| ATGGAGATGGAAATGATGAT+GGG | 0.546786 | tig0018182:+23814 | Msa1364670:CDS |
| TCAAGGTCCAATGGAAATCC+GGG | 0.547050 | tig0018182:+23588 | Msa1364670:CDS |
| TATGATTGGATTGGAGACTC+TGG | 0.549584 | tig0018182:+24873 | Msa1364670:CDS |
| CAGATCAAATTTGCTTTCTG+GGG | 0.549739 | tig0018182:+24132 | Msa1364670:CDS |
| TCTGCAGCTGAAATGGAAAG+TGG | 0.553612 | tig0018182:-23429 | None:intergenic |
| GAATTGAGAAAGGGGAACAA+TGG | 0.557447 | tig0018182:-23456 | None:intergenic |
| GAATTGGGTTCTGGTTGATG+AGG | 0.558412 | tig0018182:-23487 | None:intergenic |
| CTGAACACCAGGTGGTGCAG+AGG | 0.564287 | tig0018182:-23370 | None:intergenic |
| AATCTTAACTCTTAGGTGCG+TGG | 0.564319 | tig0018182:+27011 | Msa1364670:intron |
| GTGAGGGAGAGCTGAACACC+AGG | 0.569456 | tig0018182:-23381 | None:intergenic |
| GAGAAAATCAGTCATAGTGA+GGG | 0.573349 | tig0018182:-23397 | None:intergenic |
| AAATCCGGGTCCACCATCAA+GGG | 0.574141 | tig0018182:+23602 | Msa1364670:CDS |
| TTTCCGATATTTCGTAGAGA+GGG | 0.576370 | tig0018182:-26906 | None:intergenic |
| CGAGAAAATCAGTCATAGTG+AGG | 0.584420 | tig0018182:-23398 | None:intergenic |
| TAATCTACCTCTGCACCACC+TGG | 0.590233 | tig0018182:+23363 | Msa1364670:five_prime_UTR |
| ACTTCAATTTGAGGACTCAA+AGG | 0.590712 | tig0018182:+23644 | Msa1364670:CDS |
| TTACACTTTCATCCGGAACA+AGG | 0.590995 | tig0018182:-24834 | None:intergenic |
| TTGTGTATGAATTGAGAAAG+GGG | 0.591809 | tig0018182:-23464 | None:intergenic |
| CTTTCCGATATTTCGTAGAG+AGG | 0.593920 | tig0018182:-26907 | None:intergenic |
| ATGGTCGTGTTTCAAGGAGA+AGG | 0.594192 | tig0018182:+28789 | Msa1364670:CDS |
| CTGCAGCTGAAATGGAAAGT+GGG | 0.597668 | tig0018182:-23428 | None:intergenic |
| CCTGACTGATATCCTCAAGA+AGG | 0.599967 | tig0018182:-24168 | None:intergenic |
| GAAACCCAATCCAAGAGAGT+GGG | 0.603023 | tig0018182:+28829 | Msa1364670:CDS |
| ATGGATTACCTCTAATCTCA+CGG | 0.606618 | tig0018182:+28881 | Msa1364670:exon |
| GCGTTGAGCTCAAGGTCCAA+TGG | 0.606869 | tig0018182:+23579 | Msa1364670:CDS |
| GTTTGTCCAATGAAACTGAT+GGG | 0.608634 | tig0018182:+23694 | Msa1364670:CDS |
| CAGTAGAGTTTCATGCAGCA+AGG | 0.610896 | tig0018182:+23337 | Msa1364670:five_prime_UTR |
| GGATAATAATGAAGATAACT+GGG | 0.611995 | tig0018182:+28850 | Msa1364670:CDS |
| AAGCTATGACCCCTTGATGG+TGG | 0.616395 | tig0018182:-23612 | None:intergenic |
| GGTTTGTCCAATGAAACTGA+TGG | 0.617072 | tig0018182:+23693 | Msa1364670:CDS |
| CTGCAGCTTTACGAATACAA+AGG | 0.619054 | tig0018182:+27830 | Msa1364670:CDS |
| GGTAATTTGAGATTAAGAAG+AGG | 0.622155 | tig0018182:+23876 | Msa1364670:CDS |
| CTCTCTACGAAATATCGGAA+AGG | 0.625569 | tig0018182:+26908 | Msa1364670:CDS |
| AATTTCGGGTTAGAGTTGGA+GGG | 0.631424 | tig0018182:+23672 | Msa1364670:CDS |
| TGAGATTAGAGGTAATCCAT+AGG | 0.637566 | tig0018182:-28878 | None:intergenic |
| AATAGATGAAAATGATGACA+AGG | 0.640994 | tig0018182:+23734 | Msa1364670:CDS |
| CCCAAACTCTCCAAAACCAG+TGG | 0.665463 | tig0018182:+23537 | Msa1364670:CDS |
| AATCCGGGTCCACCATCAAG+GGG | 0.669027 | tig0018182:+23603 | Msa1364670:CDS |
| GGACCTTGAGCTCAACGCTG+CGG | 0.672455 | tig0018182:-23574 | None:intergenic |
| CCAGAATGTGGGAATCTCGG+TGG | 0.672871 | tig0018182:+28727 | Msa1364670:CDS |
| ATCCTCAACCATCAAAGAGT+AGG | 0.677244 | tig0018182:-27767 | None:intergenic |
| TGGAGATGGAAATGATGATG+GGG | 0.681181 | tig0018182:+23815 | Msa1364670:CDS |
| AGGGAGAGCTGAACACCAGG+TGG | 0.721047 | tig0018182:-23378 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTTTTTAATATGATTTA+TGG | + | tig0018182:24920-24939 | Msa1364670:intron | 10.0% |
| !!! | AACTTTTTAATATGATTTAT+GGG | + | tig0018182:24921-24940 | Msa1364670:intron | 10.0% |
| !! | TAAAAATTTCCATTTATTAA+AGG | - | tig0018182:27264-27283 | None:intergenic | 10.0% |
| !! | AATTATTTATCTATTTGTAA+CGG | - | tig0018182:28621-28640 | None:intergenic | 10.0% |
| !!! | ACAAATAGATAAATAATTTT+AGG | + | tig0018182:28623-28642 | Msa1364670:intron | 10.0% |
| !!! | TGTTTGTTTGTTTTTATAAT+TGG | + | tig0018182:24069-24088 | Msa1364670:intron | 15.0% |
| !!! | TTTATTTTATAGAAAACACT+AGG | + | tig0018182:25826-25845 | Msa1364670:intron | 15.0% |
| !! | ATTATACAAGAAATATTTGT+TGG | + | tig0018182:26440-26459 | Msa1364670:intron | 15.0% |
| !! | AAAATAGTACAATTCTAATA+TGG | + | tig0018182:27237-27256 | Msa1364670:intron | 15.0% |
| !!! | ATTTTCTATTAATCAATCAT+GGG | - | tig0018182:28089-28108 | None:intergenic | 15.0% |
| !! | ATTATTTATCTATTTGTAAC+GGG | - | tig0018182:28620-28639 | None:intergenic | 15.0% |
| !!! | TTTTTTCTAAAAAGAAATTG+AGG | - | tig0018182:28946-28965 | None:intergenic | 15.0% |
| !!! | TCTTTTTAGAAAAAATAGAA+CGG | + | tig0018182:28951-28970 | Msa1364670:three_prime_UTR | 15.0% |
| !!! | CTTTTATTTTGTTTGATATA+TGG | + | tig0018182:29065-29084 | Msa1364670:three_prime_UTR | 15.0% |
| !!! | TTGTTGAAGTTTTGTTTTTT+TGG | + | tig0018182:24033-24052 | Msa1364670:intron | 20.0% |
| !! | TTCAGTTTATATTACTCTTT+GGG | + | tig0018182:24264-24283 | Msa1364670:intron | 20.0% |
| !! | TTTGGATAAACAACTTAATT+AGG | + | tig0018182:24460-24479 | Msa1364670:intron | 20.0% |
| !!! | ATAAGCTATTTCTATAACAA+TGG | + | tig0018182:24522-24541 | Msa1364670:intron | 20.0% |
| !!! | AGTATTTTTTTTTCCTTAGT+AGG | + | tig0018182:25360-25379 | Msa1364670:intron | 20.0% |
| !! | AAATAAAGTAACAAAGAAAG+TGG | + | tig0018182:25540-25559 | Msa1364670:intron | 20.0% |
| !!! | TTTTATATCATTCTGTTCTT+GGG | - | tig0018182:25875-25894 | None:intergenic | 20.0% |
| !!! | ATTTTATATCATTCTGTTCT+TGG | - | tig0018182:25876-25895 | None:intergenic | 20.0% |
| !! | ATGAGTGTATTATTTACTAA+AGG | + | tig0018182:25894-25913 | Msa1364670:intron | 20.0% |
| !! | TATTAGTTAGTTATGTTCTA+AGG | - | tig0018182:26088-26107 | None:intergenic | 20.0% |
| !!! | GAAATTATGATTTTTTTTCC+TGG | + | tig0018182:26252-26271 | Msa1364670:intron | 20.0% |
| !! | TCATATGGATATAATTTAAC+TGG | - | tig0018182:26642-26661 | None:intergenic | 20.0% |
| !! | TGAAAAATCATATAAAGTAC+TGG | - | tig0018182:26722-26741 | None:intergenic | 20.0% |
| !!! | TCTTTTCAATTAATCATCAT+AGG | + | tig0018182:26761-26780 | Msa1364670:intron | 20.0% |
| !! | TTATGAAAATCTTAACTCTT+AGG | + | tig0018182:27004-27023 | Msa1364670:intron | 20.0% |
| !! | TAATATGGACCTTTAATAAA+TGG | + | tig0018182:27252-27271 | Msa1364670:intron | 20.0% |
| !! | AAAGCTAACTAATAGAAATT+AGG | + | tig0018182:27307-27326 | Msa1364670:intron | 20.0% |
| !! | AAGTTGAATTACTTCAAATT+TGG | - | tig0018182:27695-27714 | None:intergenic | 20.0% |
| !!! | TTTTAACAATATCTAGCTTT+TGG | - | tig0018182:28026-28045 | None:intergenic | 20.0% |
| !!! | CATTTTCTATTAATCAATCA+TGG | - | tig0018182:28090-28109 | None:intergenic | 20.0% |
| !! | TTAATCATATAAGCTGTAAT+TGG | + | tig0018182:28291-28310 | Msa1364670:intron | 20.0% |
| !! | ATGTTTATGCATGAAAATTT+AGG | + | tig0018182:28395-28414 | Msa1364670:intron | 20.0% |
| !!! | ATAATTTTAGGTTAGTGTTT+TGG | + | tig0018182:28635-28654 | Msa1364670:intron | 20.0% |
| !!! | TCAAAGAAAACACATTTTAT+TGG | + | tig0018182:28991-29010 | Msa1364670:three_prime_UTR | 20.0% |
| ! | AATAGATGAAAATGATGACA+AGG | + | tig0018182:23734-23753 | Msa1364670:CDS | 25.0% |
| ! | GATGATAAAGTTGAGAAATT+TGG | + | tig0018182:23852-23871 | Msa1364670:CDS | 25.0% |
| ! | GTTCAGTTTATATTACTCTT+TGG | + | tig0018182:24263-24282 | Msa1364670:intron | 25.0% |
| ! | AACCTGTTGATGTTAATTAT+AGG | + | tig0018182:24328-24347 | Msa1364670:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | tig0018182:24458-24477 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | tig0018182:24459-24478 | None:intergenic | 25.0% |
| ! | GACAACGAATATAATATGAT+TGG | + | tig0018182:24859-24878 | Msa1364670:CDS | 25.0% |
| ! | CGAATATAATATGATTGGAT+TGG | + | tig0018182:24864-24883 | Msa1364670:CDS | 25.0% |
| ! | AGTAGTTCATTCATATAGTT+TGG | + | tig0018182:24944-24963 | Msa1364670:intron | 25.0% |
| ! | CAATATTAAGTTTCCTTCTA+AGG | - | tig0018182:25077-25096 | None:intergenic | 25.0% |
| ! | TTAATATTGCTCATAGTATC+AGG | + | tig0018182:25088-25107 | Msa1364670:intron | 25.0% |
| ! | TAATATTGCTCATAGTATCA+GGG | + | tig0018182:25089-25108 | Msa1364670:intron | 25.0% |
| ! | TCACATAATTTACAAACCAT+GGG | - | tig0018182:25144-25163 | None:intergenic | 25.0% |
| ! | TTCACATAATTTACAAACCA+TGG | - | tig0018182:25145-25164 | None:intergenic | 25.0% |
| !! | TGAATAGAATTAGACTTGTT+TGG | + | tig0018182:25290-25309 | Msa1364670:intron | 25.0% |
| !! | GAATAGAATTAGACTTGTTT+GGG | + | tig0018182:25291-25310 | Msa1364670:intron | 25.0% |
| !! | AATAGAATTAGACTTGTTTG+GGG | + | tig0018182:25292-25311 | Msa1364670:intron | 25.0% |
| ! | GTCTTATCATAGATATCTTA+GGG | - | tig0018182:25327-25346 | None:intergenic | 25.0% |
| ! | AAAAATACTGTTGAGTATCA+GGG | - | tig0018182:25349-25368 | None:intergenic | 25.0% |
| ! | AAAAAATACTGTTGAGTATC+AGG | - | tig0018182:25350-25369 | None:intergenic | 25.0% |
| !! | TGCTGTTTATGGTTTATTTA+TGG | + | tig0018182:25633-25652 | Msa1364670:intron | 25.0% |
| !! | TCCATTTGAATATTTAAGAC+TGG | + | tig0018182:25723-25742 | Msa1364670:intron | 25.0% |
| ! | TCCAGTCTTAAATATTCAAA+TGG | - | tig0018182:25727-25746 | None:intergenic | 25.0% |
| ! | TGAATGATGGTTATATAGAA+AGG | - | tig0018182:26053-26072 | None:intergenic | 25.0% |
| ! | ATCACAAACAAAAGAAATGT+TGG | + | tig0018182:26494-26513 | Msa1364670:intron | 25.0% |
| ! | ATTGAAAAGAGTGAAAGAAA+TGG | - | tig0018182:26751-26770 | None:intergenic | 25.0% |
| ! | TTGTATAAATTTGAGAGAAG+TGG | - | tig0018182:26830-26849 | None:intergenic | 25.0% |
| !!! | TTAATTTGTTTGCATTTGCT+AGG | + | tig0018182:26863-26882 | Msa1364670:intron | 25.0% |
| !!! | AGGCTACTTTTGATAAAAAA+AGG | - | tig0018182:27397-27416 | None:intergenic | 25.0% |
| !!! | TCTGTCTTTTTTTTGTTTGT+TGG | - | tig0018182:27476-27495 | None:intergenic | 25.0% |
| !! | GTCACTGTTAAGATATTTTA+TGG | + | tig0018182:27506-27525 | Msa1364670:intron | 25.0% |
| ! | TGCAGAATATATTTGTTTCA+TGG | + | tig0018182:27662-27681 | Msa1364670:intron | 25.0% |
| ! | ACTTTAGGTCAAAAGTAAAA+TGG | + | tig0018182:27865-27884 | Msa1364670:intron | 25.0% |
| ! | AAAAAAATAATAGAAGCAGC+CGG | - | tig0018182:27912-27931 | None:intergenic | 25.0% |
| ! | ATTATTTCCAATTGTCATGA+TGG | + | tig0018182:28333-28352 | Msa1364670:intron | 25.0% |
| ! | GGATAATAATGAAGATAACT+GGG | + | tig0018182:28850-28869 | Msa1364670:CDS | 25.0% |
| TTGTGTATGAATTGAGAAAG+GGG | - | tig0018182:23467-23486 | None:intergenic | 30.0% | |
| GTTGTGTATGAATTGAGAAA+GGG | - | tig0018182:23468-23487 | None:intergenic | 30.0% | |
| !! | AAAGGAAATTGGGTTGAATT+GGG | - | tig0018182:23505-23524 | None:intergenic | 30.0% |
| !! | AAAAGGAAATTGGGTTGAAT+TGG | - | tig0018182:23506-23525 | None:intergenic | 30.0% |
| TTACAACGAACTTCAATTTG+AGG | + | tig0018182:23635-23654 | Msa1364670:CDS | 30.0% | |
| GATAAAGTTGAGAAATTTGG+TGG | + | tig0018182:23855-23874 | Msa1364670:CDS | 30.0% | |
| ! | GGTAATTTGAGATTAAGAAG+AGG | + | tig0018182:23876-23895 | Msa1364670:CDS | 30.0% |
| TATTCAATCTGCTCTTAGTT+TGG | + | tig0018182:23947-23966 | Msa1364670:CDS | 30.0% | |
| ATTCAATCTGCTCTTAGTTT+GGG | + | tig0018182:23948-23967 | Msa1364670:CDS | 30.0% | |
| ! | AAAGTGCTATTATCTTACAG+AGG | - | tig0018182:24003-24022 | None:intergenic | 30.0% |
| ! | TGGTTGAATTTCATTTTCAG+TGG | + | tig0018182:24089-24108 | Msa1364670:intron | 30.0% |
| ! | TGAATTTCATTTTCAGTGGA+TGG | + | tig0018182:24093-24112 | Msa1364670:intron | 30.0% |
| ! | TCAGATCAAATTTGCTTTCT+GGG | + | tig0018182:24131-24150 | Msa1364670:CDS | 30.0% |
| TTCAGAAAAATTCCTTCTTG+AGG | + | tig0018182:24156-24175 | Msa1364670:CDS | 30.0% | |
| ! | GGTATAACAAGTTTGGAATT+AGG | + | tig0018182:24189-24208 | Msa1364670:intron | 30.0% |
| GTAATCAAGGATAATCACTT+AGG | + | tig0018182:24300-24319 | Msa1364670:intron | 30.0% | |
| CACCTATAATTAACATCAAC+AGG | - | tig0018182:24333-24352 | None:intergenic | 30.0% | |
| AGAAGTAGAACATAATGCAT+TGG | - | tig0018182:24409-24428 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCATAAGCTATCA+TGG | + | tig0018182:24582-24601 | Msa1364670:intron | 30.0% |
| !! | GTCAAACCATTTTTATTACG+AGG | - | tig0018182:24759-24778 | None:intergenic | 30.0% |
| CGTAATAAAAATGGTTTGAC+AGG | + | tig0018182:24759-24778 | Msa1364670:intron | 30.0% | |
| TTGTCTATTACACTTTCATC+CGG | - | tig0018182:24844-24863 | None:intergenic | 30.0% | |
| ! | CTATTCAAGTAAAAGTGTGA+AGG | - | tig0018182:25277-25296 | None:intergenic | 30.0% |
| ! | GGTCTTATCATAGATATCTT+AGG | - | tig0018182:25328-25347 | None:intergenic | 30.0% |
| !!! | CGCTAGTTTTTCTAGTTTAA+AGG | - | tig0018182:25518-25537 | None:intergenic | 30.0% |
| ! | CATAACTGTAATTCCTTTTC+TGG | + | tig0018182:25563-25582 | Msa1364670:intron | 30.0% |
| ATAGCTATAAGTACCAGAAA+AGG | - | tig0018182:25579-25598 | None:intergenic | 30.0% | |
| GTACTTATAGCTATAACACT+TGG | + | tig0018182:25585-25604 | Msa1364670:intron | 30.0% | |
| TTTATAGAAAACACTAGGAG+TGG | + | tig0018182:25831-25850 | Msa1364670:intron | 30.0% | |
| ! | TTCATTTGACTTTCCTTGTT+AGG | + | tig0018182:26223-26242 | Msa1364670:intron | 30.0% |
| TAATTTCAAGCTACCTAACA+AGG | - | tig0018182:26239-26258 | None:intergenic | 30.0% | |
| ACAATTTACTGCAACTTCTT+TGG | - | tig0018182:26414-26433 | None:intergenic | 30.0% | |
| ! | AAGAAATATTTGTTGGCCAT+TGG | + | tig0018182:26447-26466 | Msa1364670:intron | 30.0% |
| !! | TTGTTTCTATACTTAGCCAA+TGG | - | tig0018182:26466-26485 | None:intergenic | 30.0% |
| ACAAACAAAAGAAATGTTGG+TGG | + | tig0018182:26497-26516 | Msa1364670:intron | 30.0% | |
| ! | GATAGTTGATTCAAGTACTT+AGG | + | tig0018182:26572-26591 | Msa1364670:intron | 30.0% |
| TCCATATGAAAATCAGAAAG+TGG | + | tig0018182:26653-26672 | Msa1364670:intron | 30.0% | |
| ! | ACCACTTTCTGATTTTCATA+TGG | - | tig0018182:26657-26676 | None:intergenic | 30.0% |
| !! | CATATAAAGTACTGGAAATC+TGG | - | tig0018182:26714-26733 | None:intergenic | 30.0% |
| GTAAATATCTGTACACAACA+TGG | - | tig0018182:26953-26972 | None:intergenic | 30.0% | |
| TGTTGTGTACAGATATTTAC+TGG | + | tig0018182:26953-26972 | Msa1364670:intron | 30.0% | |
| TACAATTTCAGCATCAATTC+AGG | + | tig0018182:27035-27054 | Msa1364670:CDS | 30.0% | |
| !! | GCAAGTTTTGTCAATGTAAT+TGG | + | tig0018182:27163-27182 | Msa1364670:intron | 30.0% |
| TAACAAACAGTGAGTTAACA+CGG | - | tig0018182:27433-27452 | None:intergenic | 30.0% | |
| ! | ATATTTTATGGCATCACAGT+TGG | + | tig0018182:27518-27537 | Msa1364670:intron | 30.0% |
| !!! | TTATCAGCTGTTTTTTAGCT+TGG | - | tig0018182:27983-28002 | None:intergenic | 30.0% |
| ACCAAATAAAAACATGGAGT+CGG | - | tig0018182:28455-28474 | None:intergenic | 30.0% | |
| TAGAGGACCAAATAAAAACA+TGG | - | tig0018182:28461-28480 | None:intergenic | 30.0% | |
| CCTCTAATTATATTCCTAGT+CGG | + | tig0018182:28475-28494 | Msa1364670:intron | 30.0% | |
| ! | AAGGAATGATTCTAGAAAGA+TGG | - | tig0018182:28532-28551 | None:intergenic | 30.0% |
| ATCATATTCCAGAATGAACA+GGG | - | tig0018182:28557-28576 | None:intergenic | 30.0% | |
| AATCATATTCCAGAATGAAC+AGG | - | tig0018182:28558-28577 | None:intergenic | 30.0% | |
| !! | GTTCATTCTGGAATATGATT+TGG | + | tig0018182:28558-28577 | Msa1364670:intron | 30.0% |
| ! | AATATGATTTGGAATTCAGC+AGG | + | tig0018182:28569-28588 | Msa1364670:intron | 30.0% |
| ! | ATATGATTTGGAATTCAGCA+GGG | + | tig0018182:28570-28589 | Msa1364670:intron | 30.0% |
| ! | TCTGAACAATCTGAAACATA+TGG | + | tig0018182:28770-28789 | Msa1364670:CDS | 30.0% |
| GGGATAATAATGAAGATAAC+TGG | + | tig0018182:28849-28868 | Msa1364670:CDS | 30.0% | |
| CCTTTATACTCCTAAAACTA+CGG | + | tig0018182:28911-28930 | Msa1364670:three_prime_UTR | 30.0% | |
| !! | TTCTTTGAAACTTATGAGCA+GGG | - | tig0018182:28979-28998 | None:intergenic | 30.0% |
| !! | TTTCTTTGAAACTTATGAGC+AGG | - | tig0018182:28980-28999 | None:intergenic | 30.0% |
| GAGAAAATCAGTCATAGTGA+GGG | - | tig0018182:23400-23419 | None:intergenic | 35.0% | |
| GGTTGTGTATGAATTGAGAA+AGG | - | tig0018182:23469-23488 | None:intergenic | 35.0% | |
| AAAAGGGGGAAAAGGAAATT+GGG | - | tig0018182:23515-23534 | None:intergenic | 35.0% | |
| ACTTCAATTTGAGGACTCAA+AGG | + | tig0018182:23644-23663 | Msa1364670:CDS | 35.0% | |
| GACTCAAAGGAGAACAATTT+CGG | + | tig0018182:23657-23676 | Msa1364670:CDS | 35.0% | |
| ACTCAAAGGAGAACAATTTC+GGG | + | tig0018182:23658-23677 | Msa1364670:CDS | 35.0% | |
| GTTTGTCCAATGAAACTGAT+GGG | + | tig0018182:23694-23713 | Msa1364670:CDS | 35.0% | |
| GAAAATGATGACAAGGAAAG+TGG | + | tig0018182:23741-23760 | Msa1364670:CDS | 35.0% | |
| ATGGAGATGGAAATGATGAT+GGG | + | tig0018182:23814-23833 | Msa1364670:CDS | 35.0% | |
| GAGGTAAACAAGTGATTAGA+AGG | + | tig0018182:23895-23914 | Msa1364670:CDS | 35.0% | |
| GATTAGAAGGTCGAATTTGT+TGG | + | tig0018182:23908-23927 | Msa1364670:CDS | 35.0% | |
| ! | GTCAGATCAAATTTGCTTTC+TGG | + | tig0018182:24130-24149 | Msa1364670:CDS | 35.0% |
| ! | CAGATCAAATTTGCTTTCTG+GGG | + | tig0018182:24132-24151 | Msa1364670:CDS | 35.0% |
| TCAGTCAGGTATAACAAGTT+TGG | + | tig0018182:24182-24201 | Msa1364670:intron | 35.0% | |
| ACCAATAATGTCTACATGCT+TGG | + | tig0018182:24241-24260 | Msa1364670:intron | 35.0% | |
| ACCAAGCATGTAGACATTAT+TGG | - | tig0018182:24245-24264 | None:intergenic | 35.0% | |
| !! | AGCTCTTTTGACTGTAATCA+AGG | + | tig0018182:24287-24306 | Msa1364670:intron | 35.0% |
| GCATTATGTTCTACTTCTGA+TGG | + | tig0018182:24411-24430 | Msa1364670:intron | 35.0% | |
| TCCAAACAAACATACTCTTG+TGG | + | tig0018182:24721-24740 | Msa1364670:intron | 35.0% | |
| GGAACTCCTCGTAATAAAAA+TGG | + | tig0018182:24750-24769 | Msa1364670:intron | 35.0% | |
| TTCATATAGTTTGGCAGAAG+AGG | + | tig0018182:24953-24972 | Msa1364670:intron | 35.0% | |
| TCATATAGTTTGGCAGAAGA+GGG | + | tig0018182:24954-24973 | Msa1364670:intron | 35.0% | |
| GAAGAAAATATGTGGGCATA+AGG | - | tig0018182:25122-25141 | None:intergenic | 35.0% | |
| ACCATGGGAAGAAAATATGT+GGG | - | tig0018182:25129-25148 | None:intergenic | 35.0% | |
| AACCATGGGAAGAAAATATG+TGG | - | tig0018182:25130-25149 | None:intergenic | 35.0% | |
| AGTGACATGATCCATTACAA+GGG | - | tig0018182:25197-25216 | None:intergenic | 35.0% | |
| ! | TCAAGTAAAAGTGTGAAGGT+AGG | - | tig0018182:25273-25292 | None:intergenic | 35.0% |
| TACTCTTACATTCCTACAGA+GGG | - | tig0018182:25456-25475 | None:intergenic | 35.0% | |
| TTACTCTTACATTCCTACAG+AGG | - | tig0018182:25457-25476 | None:intergenic | 35.0% | |
| CTAATTGTTCAAACAACGCA+AGG | - | tig0018182:25487-25506 | None:intergenic | 35.0% | |
| ! | ACATGATCTGATGCTGTTTA+TGG | + | tig0018182:25622-25641 | Msa1364670:intron | 35.0% |
| CATTAGTTATCCTATTCCTG+TGG | + | tig0018182:25793-25812 | Msa1364670:intron | 35.0% | |
| AATAAAATCCTATGTGCCAC+AGG | - | tig0018182:25812-25831 | None:intergenic | 35.0% | |
| TTTGCTCTTGGGATTATAAG+GGG | - | tig0018182:25946-25965 | None:intergenic | 35.0% | |
| CTTTGCTCTTGGGATTATAA+GGG | - | tig0018182:25947-25966 | None:intergenic | 35.0% | |
| ! | TCAGTTTTACAGTTGTGACT+AGG | - | tig0018182:25996-26015 | None:intergenic | 35.0% |
| TATAGAAAGGTAGTGACATG+AGG | - | tig0018182:26040-26059 | None:intergenic | 35.0% | |
| TCTTTGTGCAGTCAAATTGT+TGG | + | tig0018182:26129-26148 | Msa1364670:intron | 35.0% | |
| CTTTGTGCAGTCAAATTGTT+GGG | + | tig0018182:26130-26149 | Msa1364670:intron | 35.0% | |
| !!! | ATTTTTTTTCCTGGCGAAGA+GGG | + | tig0018182:26261-26280 | Msa1364670:intron | 35.0% |
| AACTCCATATGCCAGTTTAA+TGG | - | tig0018182:26287-26306 | None:intergenic | 35.0% | |
| GTCTCAGTCTTAATGTTGTA+AGG | + | tig0018182:26320-26339 | Msa1364670:intron | 35.0% | |
| GGCTAAGTATAGAAACAAGT+AGG | + | tig0018182:26468-26487 | Msa1364670:intron | 35.0% | |
| TGGAAATCTGGATAAAAGTG+TGG | - | tig0018182:26702-26721 | None:intergenic | 35.0% | |
| ! | TTTGTTTGCATTTGCTAGGT+TGG | + | tig0018182:26867-26886 | Msa1364670:intron | 35.0% |
| TTTCCGATATTTCGTAGAGA+GGG | - | tig0018182:26909-26928 | None:intergenic | 35.0% | |
| GAACTTGAGATAGACTCATT+TGG | + | tig0018182:27068-27087 | Msa1364670:CDS | 35.0% | |
| ATCCATCATTCCATCAAGTT+TGG | + | tig0018182:27094-27113 | Msa1364670:CDS | 35.0% | |
| TACCAAACTTGATGGAATGA+TGG | - | tig0018182:27099-27118 | None:intergenic | 35.0% | |
| ATTCCATCAAGTTTGGTAAG+TGG | + | tig0018182:27101-27120 | Msa1364670:intron | 35.0% | |
| AAACCACTTACCAAACTTGA+TGG | - | tig0018182:27107-27126 | None:intergenic | 35.0% | |
| ! | ATTAGGCGAAACTCCTATTT+TGG | + | tig0018182:27324-27343 | Msa1364670:intron | 35.0% |
| ACTCTCCATTTAATCCTTTG+CGG | + | tig0018182:27351-27370 | Msa1364670:intron | 35.0% | |
| TTCATCCGCAAAGGATTAAA+TGG | - | tig0018182:27359-27378 | None:intergenic | 35.0% | |
| ! | AAATTTGAAATGCTCGGTGA+GGG | - | tig0018182:27559-27578 | None:intergenic | 35.0% |
| ! | AAAATTTGAAATGCTCGGTG+AGG | - | tig0018182:27560-27579 | None:intergenic | 35.0% |
| ! | TCACCGAGCATTTCAAATTT+TGG | + | tig0018182:27559-27578 | Msa1364670:intron | 35.0% |
| ! | CACCGAGCATTTCAAATTTT+GGG | + | tig0018182:27560-27579 | Msa1364670:intron | 35.0% |
| ! | ACCGAGCATTTCAAATTTTG+GGG | + | tig0018182:27561-27580 | Msa1364670:intron | 35.0% |
| ! | ACCCCAAAATTTGAAATGCT+CGG | - | tig0018182:27565-27584 | None:intergenic | 35.0% |
| TAGTTGCAGCTGAAAAAACT+AGG | + | tig0018182:27626-27645 | Msa1364670:intron | 35.0% | |
| AGTTGCAGCTGAAAAAACTA+GGG | + | tig0018182:27627-27646 | Msa1364670:intron | 35.0% | |
| ! | CTTTTGACCTAAAGTTACCT+TGG | - | tig0018182:27860-27879 | None:intergenic | 35.0% |
| TGTGTATCCATCATGACAAT+TGG | - | tig0018182:28343-28362 | None:intergenic | 35.0% | |
| AAGCAGGGGAAATGAAAATA+AGG | - | tig0018182:28424-28443 | None:intergenic | 35.0% | |
| ! | ATTTTCATTTCCCCTGCTTA+TGG | + | tig0018182:28425-28444 | Msa1364670:intron | 35.0% |
| !! | ACCGACTCCATGTTTTTATT+TGG | + | tig0018182:28451-28470 | Msa1364670:intron | 35.0% |
| CCGACTAGGAATATAATTAG+AGG | - | tig0018182:28478-28497 | None:intergenic | 35.0% | |
| GAAAATGAACAAATCCGACT+AGG | - | tig0018182:28492-28511 | None:intergenic | 35.0% | |
| ! | ACTTCCAATTTTCTTTCACC+AGG | + | tig0018182:28691-28710 | Msa1364670:intron | 35.0% |
| ! | CTTCCAATTTTCTTTCACCA+GGG | + | tig0018182:28692-28711 | Msa1364670:intron | 35.0% |
| AAACATATGGTCGTGTTTCA+AGG | + | tig0018182:28783-28802 | Msa1364670:CDS | 35.0% | |
| TCATTATTATCCCACTCTCT+TGG | - | tig0018182:28842-28861 | None:intergenic | 35.0% | |
| TGAGATTAGAGGTAATCCAT+AGG | - | tig0018182:28881-28900 | None:intergenic | 35.0% | |
| ! | ATGGATTACCTCTAATCTCA+CGG | + | tig0018182:28881-28900 | Msa1364670:exon | 35.0% |
| !!! | CCGTAGTTTTAGGAGTATAA+AGG | - | tig0018182:28914-28933 | None:intergenic | 35.0% |
| CGAGAAAATCAGTCATAGTG+AGG | - | tig0018182:23401-23420 | None:intergenic | 40.0% | |
| GAATTGAGAAAGGGGAACAA+TGG | - | tig0018182:23459-23478 | None:intergenic | 40.0% | |
| !! | AATTGGGTTGAATTGGGTTC+TGG | - | tig0018182:23499-23518 | None:intergenic | 40.0% |
| GAAAAGGGGGAAAAGGAAAT+TGG | - | tig0018182:23516-23535 | None:intergenic | 40.0% | |
| TTGGAGAGTTTGGGTGAAAA+GGG | - | tig0018182:23531-23550 | None:intergenic | 40.0% | |
| TTTGGAGAGTTTGGGTGAAA+AGG | - | tig0018182:23532-23551 | None:intergenic | 40.0% | |
| TAAAAGCTATGACCCCTTGA+TGG | - | tig0018182:23618-23637 | None:intergenic | 40.0% | |
| !! | GAACAATTTCGGGTTAGAGT+TGG | + | tig0018182:23668-23687 | Msa1364670:CDS | 40.0% |
| !! | AATTTCGGGTTAGAGTTGGA+GGG | + | tig0018182:23672-23691 | Msa1364670:CDS | 40.0% |
| GGTTTGTCCAATGAAACTGA+TGG | + | tig0018182:23693-23712 | Msa1364670:CDS | 40.0% | |
| GTTAGACCCATCAGTTTCAT+TGG | - | tig0018182:23703-23722 | None:intergenic | 40.0% | |
| TGGAAACAGTGCGAATGAAT+TGG | + | tig0018182:23761-23780 | Msa1364670:CDS | 40.0% | |
| GGAAACAGTGCGAATGAATT+GGG | + | tig0018182:23762-23781 | Msa1364670:CDS | 40.0% | |
| GGGAGAAGATGATTTGATTC+CGG | + | tig0018182:23782-23801 | Msa1364670:CDS | 40.0% | |
| GATGGAGATGGAAATGATGA+TGG | + | tig0018182:23813-23832 | Msa1364670:CDS | 40.0% | |
| ! | TGGAGATGGAAATGATGATG+GGG | + | tig0018182:23815-23834 | Msa1364670:CDS | 40.0% |
| !! | ATTATAGGTGCTGTTTGCTG+TGG | + | tig0018182:24343-24362 | Msa1364670:intron | 40.0% |
| ! | GCCACAAGAGTATGTTTGTT+TGG | - | tig0018182:24725-24744 | None:intergenic | 40.0% |
| ! | TTTTCGCATGTTCCTTTGTC+AGG | + | tig0018182:24798-24817 | Msa1364670:intron | 40.0% |
| TTACACTTTCATCCGGAACA+AGG | - | tig0018182:24837-24856 | None:intergenic | 40.0% | |
| ! | TATGATTGGATTGGAGACTC+TGG | + | tig0018182:24873-24892 | Msa1364670:CDS | 40.0% |
| AAGAGTGATCATGCCTTAGA+AGG | + | tig0018182:25061-25080 | Msa1364670:intron | 40.0% | |
| GGTACAGTTGCAGATCATAT+CGG | - | tig0018182:25176-25195 | None:intergenic | 40.0% | |
| CAGTGACATGATCCATTACA+AGG | - | tig0018182:25198-25217 | None:intergenic | 40.0% | |
| !! | CTTGTAATGGATCATGTCAC+TGG | + | tig0018182:25196-25215 | Msa1364670:intron | 40.0% |
| GTTCGATAAAACTCCTACCA+TGG | - | tig0018182:25426-25445 | None:intergenic | 40.0% | |
| TAGCTATAACACTTGGTACC+TGG | + | tig0018182:25592-25611 | Msa1364670:intron | 40.0% | |
| TCAGATCATGTTACAGAACC+AGG | - | tig0018182:25613-25632 | None:intergenic | 40.0% | |
| !! | GAAAAAAGCATCCAGAAGAG+TGG | - | tig0018182:25682-25701 | None:intergenic | 40.0% |
| AGAAAACACTAGGAGTGGAT+AGG | + | tig0018182:25836-25855 | Msa1364670:intron | 40.0% | |
| TTGCTCTTGGGATTATAAGG+GGG | - | tig0018182:25945-25964 | None:intergenic | 40.0% | |
| GCTTTGCTCTTGGGATTATA+AGG | - | tig0018182:25948-25967 | None:intergenic | 40.0% | |
| ! | TGAGGAGGTTATCGAACTTT+TGG | - | tig0018182:26022-26041 | None:intergenic | 40.0% |
| TAACCATCATTCACGTGACA+CGG | + | tig0018182:26060-26079 | Msa1364670:intron | 40.0% | |
| GACTGCACAAAGAAGTTAGA+GGG | - | tig0018182:26122-26141 | None:intergenic | 40.0% | |
| TGACTGCACAAAGAAGTTAG+AGG | - | tig0018182:26123-26142 | None:intergenic | 40.0% | |
| GCAGTCAAATTGTTGGGTTT+AGG | + | tig0018182:26136-26155 | Msa1364670:intron | 40.0% | |
| ! | GAAGCACTCTAATTCCTGAT+AGG | - | tig0018182:26176-26195 | None:intergenic | 40.0% |
| !!! | GATTTTTTTTCCTGGCGAAG+AGG | + | tig0018182:26260-26279 | Msa1364670:intron | 40.0% |
| CATAACGACTCGCTAAAATC+TGG | - | tig0018182:26531-26550 | None:intergenic | 40.0% | |
| CATCATAGGAAGTAATTCCG+TGG | + | tig0018182:26775-26794 | Msa1364670:intron | 40.0% | |
| ! | AAGTAATTCCGTGGATTGTC+AGG | + | tig0018182:26784-26803 | Msa1364670:intron | 40.0% |
| CTTTCCGATATTTCGTAGAG+AGG | - | tig0018182:26910-26929 | None:intergenic | 40.0% | |
| CTCTCTACGAAATATCGGAA+AGG | + | tig0018182:26908-26927 | Msa1364670:CDS | 40.0% | |
| AATCTTAACTCTTAGGTGCG+TGG | + | tig0018182:27011-27030 | Msa1364670:intron | 40.0% | |
| ATCTTAACTCTTAGGTGCGT+GGG | + | tig0018182:27012-27031 | Msa1364670:intron | 40.0% | |
| GTATCCGATTCATGCATTGT+TGG | + | tig0018182:27192-27211 | Msa1364670:intron | 40.0% | |
| TCCTCCAACAATGCATGAAT+CGG | - | tig0018182:27199-27218 | None:intergenic | 40.0% | |
| TTCATGCATTGTTGGAGGAA+AGG | + | tig0018182:27200-27219 | Msa1364670:intron | 40.0% | |
| TCATGCATTGTTGGAGGAAA+GGG | + | tig0018182:27201-27220 | Msa1364670:intron | 40.0% | |
| TGTTGAGTGAGATTTAGCAG+TGG | - | tig0018182:27287-27306 | None:intergenic | 40.0% | |
| ATGGAGAGTGAGACCAAAAT+AGG | - | tig0018182:27340-27359 | None:intergenic | 40.0% | |
| TTGCAAAACTTCATCCGCAA+AGG | - | tig0018182:27368-27387 | None:intergenic | 40.0% | |
| ! | GCGGATGAAGTTTTGCAATT+TGG | + | tig0018182:27370-27389 | Msa1364670:intron | 40.0% |
| !! | AACACGGATGGATTGAATTG+AGG | - | tig0018182:27417-27436 | None:intergenic | 40.0% |
| AAACAGTGAGTTAACACGGA+TGG | - | tig0018182:27429-27448 | None:intergenic | 40.0% | |
| ! | TACCTACTCTTTGATGGTTG+AGG | + | tig0018182:27765-27784 | Msa1364670:CDS | 40.0% |
| ATCCTCAACCATCAAAGAGT+AGG | - | tig0018182:27770-27789 | None:intergenic | 40.0% | |
| CTGCAGCTTTACGAATACAA+AGG | + | tig0018182:27830-27849 | Msa1364670:CDS | 40.0% | |
| ACGAATACAAAGGCTTTCCA+AGG | + | tig0018182:27840-27859 | Msa1364670:CDS | 40.0% | |
| AGGCTTTCCAAGGTAACTTT+AGG | + | tig0018182:27850-27869 | Msa1364670:intron | 40.0% | |
| AAGTAAAATGGCCAAGTGAC+AGG | + | tig0018182:27877-27896 | Msa1364670:intron | 40.0% | |
| TGAATTCCTCTCTCCAGATT+AGG | + | tig0018182:27953-27972 | Msa1364670:intron | 40.0% | |
| ! | TTAGCTTGGTGAACCTAATC+TGG | - | tig0018182:27969-27988 | None:intergenic | 40.0% |
| ! | AGCTTGCTTGACAAAAGTAG+AGG | - | tig0018182:28265-28284 | None:intergenic | 40.0% |
| ! | TTCCTTTTCCCTGTTCATTC+TGG | + | tig0018182:28546-28565 | Msa1364670:intron | 40.0% |
| TTCCAGAATGAACAGGGAAA+AGG | - | tig0018182:28551-28570 | None:intergenic | 40.0% | |
| AAGCCCTGGTGAAAGAAAAT+TGG | - | tig0018182:28698-28717 | None:intergenic | 40.0% | |
| ! | TTTCTTTCACCAGGGCTTTT+TGG | + | tig0018182:28700-28719 | Msa1364670:intron | 40.0% |
| ! | TTCTTTCACCAGGGCTTTTT+GGG | + | tig0018182:28701-28720 | Msa1364670:intron | 40.0% |
| !! | TTTTTGGGCAACCAGAATGT+GGG | + | tig0018182:28716-28735 | Msa1364670:CDS | 40.0% |
| ! | TCAAGGAGAAGGAAAGGTTT+TGG | + | tig0018182:28800-28819 | Msa1364670:CDS | 40.0% |
| TTATCCCACTCTCTTGGATT+GGG | - | tig0018182:28836-28855 | None:intergenic | 40.0% | |
| ATTATCCCACTCTCTTGGAT+TGG | - | tig0018182:28837-28856 | None:intergenic | 40.0% | |
| TACTCCTAAAACTACGGCAA+TGG | + | tig0018182:28917-28936 | Msa1364670:three_prime_UTR | 40.0% | |
| CAGTAGAGTTTCATGCAGCA+AGG | + | tig0018182:23337-23356 | Msa1364670:five_prime_UTR | 45.0% | |
| CTGCAGCTGAAATGGAAAGT+GGG | - | tig0018182:23431-23450 | None:intergenic | 45.0% | |
| TCTGCAGCTGAAATGGAAAG+TGG | - | tig0018182:23432-23451 | None:intergenic | 45.0% | |
| TGGAGATTCTGCAGCTGAAA+TGG | - | tig0018182:23439-23458 | None:intergenic | 45.0% | |
| ! | GAATTGGGTTCTGGTTGATG+AGG | - | tig0018182:23490-23509 | None:intergenic | 45.0% |
| TTTGGGTGAAAAGGGGGAAA+AGG | - | tig0018182:23523-23542 | None:intergenic | 45.0% | |
| TGGAGAGTTTGGGTGAAAAG+GGG | - | tig0018182:23530-23549 | None:intergenic | 45.0% | |
| !!! | CCACTGGTTTTGGAGAGTTT+GGG | - | tig0018182:23540-23559 | None:intergenic | 45.0% |
| !!! | ACTGTTGTTGCCACTGGTTT+TGG | - | tig0018182:23550-23569 | None:intergenic | 45.0% |
| CTCAAGGTCCAATGGAAATC+CGG | + | tig0018182:23587-23606 | Msa1364670:CDS | 45.0% | |
| TCAAGGTCCAATGGAAATCC+GGG | + | tig0018182:23588-23607 | Msa1364670:CDS | 45.0% | |
| !! | CAATTTCGGGTTAGAGTTGG+AGG | + | tig0018182:23671-23690 | Msa1364670:CDS | 45.0% |
| ! | GATGATTTGATTCCGGTTCG+TGG | + | tig0018182:23789-23808 | Msa1364670:CDS | 45.0% |
| TGGGATTTGTCTCACAGCTT+TGG | + | tig0018182:23967-23986 | Msa1364670:CDS | 45.0% | |
| GGGATTTGTCTCACAGCTTT+GGG | + | tig0018182:23968-23987 | Msa1364670:CDS | 45.0% | |
| !! | ATTTGTCTCACAGCTTTGGG+TGG | + | tig0018182:23971-23990 | Msa1364670:CDS | 45.0% |
| !! | GTGGATGGTCTTGTTTGTAG+AGG | + | tig0018182:24108-24127 | Msa1364670:intron | 45.0% |
| CCTGACTGATATCCTCAAGA+AGG | - | tig0018182:24171-24190 | None:intergenic | 45.0% | |
| CCTTCTTGAGGATATCAGTC+AGG | + | tig0018182:24168-24187 | Msa1364670:CDS | 45.0% | |
| !! | TGCTGTTTGCTGTGGAAGTA+GGG | + | tig0018182:24351-24370 | Msa1364670:intron | 45.0% |
| ! | CAACTTGACTTGACCCTGTT+TGG | + | tig0018182:24442-24461 | Msa1364670:intron | 45.0% |
| AACATACTCTTGTGGCTGCA+TGG | + | tig0018182:24729-24748 | Msa1364670:intron | 45.0% | |
| GCATGTTCCTTTGTCAGGTT+GGG | + | tig0018182:24803-24822 | Msa1364670:intron | 45.0% | |
| ! | CATGTTCCTTTGTCAGGTTG+GGG | + | tig0018182:24804-24823 | Msa1364670:intron | 45.0% |
| ! | GCCCACATATTTTCTTCCCA+TGG | + | tig0018182:25125-25144 | Msa1364670:intron | 45.0% |
| CTGCAACTGTACCCTTGTAA+TGG | + | tig0018182:25183-25202 | Msa1364670:intron | 45.0% | |
| ATAAAACTCCTACCATGGCG+GGG | - | tig0018182:25421-25440 | None:intergenic | 45.0% | |
| GATAAAACTCCTACCATGGC+GGG | - | tig0018182:25422-25441 | None:intergenic | 45.0% | |
| CGATAAAACTCCTACCATGG+CGG | - | tig0018182:25423-25442 | None:intergenic | 45.0% | |
| !! | GGTAGGAGTTTTATCGAACC+TGG | + | tig0018182:25427-25446 | Msa1364670:intron | 45.0% |
| GAAAGTGATCTCCACTCTTC+TGG | + | tig0018182:25668-25687 | Msa1364670:intron | 45.0% | |
| ATCCTATTCCTGTGGCACAT+AGG | + | tig0018182:25801-25820 | Msa1364670:intron | 45.0% | |
| ATCCTATGTGCCACAGGAAT+AGG | - | tig0018182:25806-25825 | None:intergenic | 45.0% | |
| TCTGTAGGAGCTTTGCTCTT+GGG | - | tig0018182:25957-25976 | None:intergenic | 45.0% | |
| TACAGTTGTGACTAGGCAGA+GGG | - | tig0018182:25989-26008 | None:intergenic | 45.0% | |
| TTACAGTTGTGACTAGGCAG+AGG | - | tig0018182:25990-26009 | None:intergenic | 45.0% | |
| AGAAAGGTAGTGACATGAGG+AGG | - | tig0018182:26037-26056 | None:intergenic | 45.0% | |
| GTTGGGTTTAGGCCATTAGT+CGG | + | tig0018182:26147-26166 | Msa1364670:intron | 45.0% | |
| ! | CCTGATAGGATACCGACTAA+TGG | - | tig0018182:26162-26181 | None:intergenic | 45.0% |
| CCATTAGTCGGTATCCTATC+AGG | + | tig0018182:26159-26178 | Msa1364670:intron | 45.0% | |
| ! | ATTAGAGTGCTTCCTTACGC+TGG | + | tig0018182:26183-26202 | Msa1364670:intron | 45.0% |
| ! | TTAGAGTGCTTCCTTACGCT+GGG | + | tig0018182:26184-26203 | Msa1364670:intron | 45.0% |
| AGGGCCATTAAACTGGCATA+TGG | + | tig0018182:26280-26299 | Msa1364670:intron | 45.0% | |
| ! | GAGAAGTGGTAATGAAGCCA+AGG | - | tig0018182:26816-26835 | None:intergenic | 45.0% |
| ACGCCCTCTCTACGAAATAT+CGG | + | tig0018182:26903-26922 | Msa1364670:CDS | 45.0% | |
| TCCGATTCATGCATTGTTGG+AGG | + | tig0018182:27195-27214 | Msa1364670:intron | 45.0% | |
| CATGCATTGTTGGAGGAAAG+GGG | + | tig0018182:27202-27221 | Msa1364670:intron | 45.0% | |
| ATGCATTGTTGGAGGAAAGG+GGG | + | tig0018182:27203-27222 | Msa1364670:intron | 45.0% | |
| CTACAACTGCAGGTATGAAC+AGG | - | tig0018182:27609-27628 | None:intergenic | 45.0% | |
| GGTGAGTACCTACTCTTTGA+TGG | + | tig0018182:27759-27778 | Msa1364670:intron | 45.0% | |
| !! | CTTTTTGGGCAACCAGAATG+TGG | + | tig0018182:28715-28734 | Msa1364670:CDS | 45.0% |
| CAACCAGAATGTGGGAATCT+CGG | + | tig0018182:28724-28743 | Msa1364670:CDS | 45.0% | |
| ATGGTCGTGTTTCAAGGAGA+AGG | + | tig0018182:28789-28808 | Msa1364670:CDS | 45.0% | |
| CGTGTTTCAAGGAGAAGGAA+AGG | + | tig0018182:28794-28813 | Msa1364670:CDS | 45.0% | |
| AGAAACCCAATCCAAGAGAG+TGG | + | tig0018182:28828-28847 | Msa1364670:CDS | 45.0% | |
| GAAACCCAATCCAAGAGAGT+GGG | + | tig0018182:28829-28848 | Msa1364670:CDS | 45.0% | |
| AGATAACTGGGAGCTTCCTA+TGG | + | tig0018182:28862-28881 | Msa1364670:CDS | 45.0% | |
| ACCTCTAATCTCACGGTCTT+CGG | + | tig0018182:28888-28907 | Msa1364670:exon | 45.0% | |
| ! | GACTCCATTGCCGTAGTTTT+AGG | - | tig0018182:28924-28943 | None:intergenic | 45.0% |
| !!! | ATTTTCTATTTAATTATTTT+AGG | + | tig0018182:27738-27757 | Msa1364670:intron | 5.0% |
| TAATCTACCTCTGCACCACC+TGG | + | tig0018182:23363-23382 | Msa1364670:five_prime_UTR | 50.0% | |
| GGAGAGTTTGGGTGAAAAGG+GGG | - | tig0018182:23529-23548 | None:intergenic | 50.0% | |
| CCCAAACTCTCCAAAACCAG+TGG | + | tig0018182:23537-23556 | Msa1364670:CDS | 50.0% | |
| !!! | GCCACTGGTTTTGGAGAGTT+TGG | - | tig0018182:23541-23560 | None:intergenic | 50.0% |
| GGAAACACTGTTGTTGCCAC+TGG | - | tig0018182:23556-23575 | None:intergenic | 50.0% | |
| AAATCCGGGTCCACCATCAA+GGG | + | tig0018182:23602-23621 | Msa1364670:CDS | 50.0% | |
| AAGCTATGACCCCTTGATGG+TGG | - | tig0018182:23615-23634 | None:intergenic | 50.0% | |
| ! | TTGATTCCGGTTCGTGGTGA+TGG | + | tig0018182:23795-23814 | Msa1364670:CDS | 50.0% |
| !! | GTGCTGTTTGCTGTGGAAGT+AGG | + | tig0018182:24350-24369 | Msa1364670:intron | 50.0% |
| CGCATGTTCCTTTGTCAGGT+TGG | + | tig0018182:24802-24821 | Msa1364670:intron | 50.0% | |
| CAACATCCCCAACCTGACAA+AGG | - | tig0018182:24813-24832 | None:intergenic | 50.0% | |
| TGGGGATGTTGTCCTTGTTC+CGG | + | tig0018182:24822-24841 | Msa1364670:CDS | 50.0% | |
| TGCAGATCACGCTCCTACTA+AGG | - | tig0018182:25376-25395 | None:intergenic | 50.0% | |
| GGGGGAACTCTTGTGATCAA+TGG | - | tig0018182:25927-25946 | None:intergenic | 50.0% | |
| CTCTGTAGGAGCTTTGCTCT+TGG | - | tig0018182:25958-25977 | None:intergenic | 50.0% | |
| CAAGAGCAAAGCTCCTACAG+AGG | + | tig0018182:25956-25975 | Msa1364670:intron | 50.0% | |
| !! | AGAGGGTGTTCATCCTCTGT+AGG | - | tig0018182:25972-25991 | None:intergenic | 50.0% |
| !! | CATTCAAGTTGCCCAGCGTA+AGG | - | tig0018182:26198-26217 | None:intergenic | 50.0% |
| TACTCTAGACAGAGCCAGAG+AGG | + | tig0018182:26351-26370 | Msa1364670:intron | 50.0% | |
| ACTCTAGACAGAGCCAGAGA+GGG | + | tig0018182:26352-26371 | Msa1364670:intron | 50.0% | |
| GGTTGACACCTGACAATCCA+CGG | - | tig0018182:26795-26814 | None:intergenic | 50.0% | |
| GGATTGTCAGGTGTCAACCT+TGG | + | tig0018182:26796-26815 | Msa1364670:intron | 50.0% | |
| TGCATTGTTGGAGGAAAGGG+GGG | + | tig0018182:27204-27223 | Msa1364670:intron | 50.0% | |
| ! | TTGAAATGCTCGGTGAGGGA+TGG | - | tig0018182:27555-27574 | None:intergenic | 50.0% |
| TCAGCTGCAACTACAACTGC+AGG | - | tig0018182:27619-27638 | None:intergenic | 50.0% | |
| ! | GGCCAAGTGACAGGTTTTCT+CGG | + | tig0018182:27886-27905 | Msa1364670:intron | 50.0% |
| ! | AAGTGACAGGTTTTCTCGGC+CGG | + | tig0018182:27890-27909 | Msa1364670:intron | 50.0% |
| GGTGAACCTAATCTGGAGAG+AGG | - | tig0018182:27962-27981 | None:intergenic | 50.0% | |
| AGTCGGTATGCCATAAGCAG+GGG | - | tig0018182:28438-28457 | None:intergenic | 50.0% | |
| GAGTCGGTATGCCATAAGCA+GGG | - | tig0018182:28439-28458 | None:intergenic | 50.0% | |
| !! | GGAAAACTTGCTGAGCAGTG+TGG | + | tig0018182:28591-28610 | Msa1364670:intron | 50.0% |
| ! | TTTCCGCAGCGTTGAGCTCA+AGG | + | tig0018182:23571-23590 | Msa1364670:CDS | 55.0% |
| GCGTTGAGCTCAAGGTCCAA+TGG | + | tig0018182:23579-23598 | Msa1364670:CDS | 55.0% | |
| ! | TGGTGGACCCGGATTTCCAT+TGG | - | tig0018182:23598-23617 | None:intergenic | 55.0% |
| GAAATCCGGGTCCACCATCA+AGG | + | tig0018182:23601-23620 | Msa1364670:CDS | 55.0% | |
| AATCCGGGTCCACCATCAAG+GGG | + | tig0018182:23603-23622 | Msa1364670:CDS | 55.0% | |
| CCATCTCCATCACCACGAAC+CGG | - | tig0018182:23804-23823 | None:intergenic | 55.0% | |
| ! | AGTAGGAGCGTGATCTGCAG+TGG | + | tig0018182:25377-25396 | Msa1364670:intron | 55.0% |
| ! | GTAGGAGCGTGATCTGCAGT+GGG | + | tig0018182:25378-25397 | Msa1364670:intron | 55.0% |
| ! | CTCTTTTCTAGACCCCGCCA+TGG | + | tig0018182:25406-25425 | Msa1364670:intron | 55.0% |
| TTTCTAGACCCCGCCATGGT+AGG | + | tig0018182:25410-25429 | Msa1364670:intron | 55.0% | |
| CATTCCTACAGAGGGCAACC+AGG | - | tig0018182:25448-25467 | None:intergenic | 55.0% | |
| GAGCCGTGTCACGTGAATGA+TGG | - | tig0018182:26066-26085 | None:intergenic | 55.0% | |
| GTTTAATGGCCCTCTTCGCC+AGG | - | tig0018182:26273-26292 | None:intergenic | 55.0% | |
| GGCGAAGAGGGCCATTAAAC+TGG | + | tig0018182:26273-26292 | Msa1364670:intron | 55.0% | |
| GGCCGAGAAAACCTGTCACT+TGG | - | tig0018182:27891-27910 | None:intergenic | 55.0% | |
| GGAGTCGGTATGCCATAAGC+AGG | - | tig0018182:28440-28459 | None:intergenic | 55.0% | |
| TCTGGTTGCCCAAAAAGCCC+TGG | - | tig0018182:28712-28731 | None:intergenic | 55.0% | |
| CCACCGAGATTCCCACATTC+TGG | - | tig0018182:28730-28749 | None:intergenic | 55.0% | |
| CCAGAATGTGGGAATCTCGG+TGG | + | tig0018182:28727-28746 | Msa1364670:CDS | 55.0% | |
| GCCGAAGACCGTGAGATTAG+AGG | - | tig0018182:28892-28911 | None:intergenic | 55.0% | |
| CTGAACACCAGGTGGTGCAG+AGG | - | tig0018182:23373-23392 | None:intergenic | 60.0% | |
| AGGGAGAGCTGAACACCAGG+TGG | - | tig0018182:23381-23400 | None:intergenic | 60.0% | |
| GTGAGGGAGAGCTGAACACC+AGG | - | tig0018182:23384-23403 | None:intergenic | 60.0% | |
| GGACCTTGAGCTCAACGCTG+CGG | - | tig0018182:23577-23596 | None:intergenic | 60.0% | |
| !! | TGACCCCTTGATGGTGGACC+CGG | - | tig0018182:23609-23628 | None:intergenic | 60.0% |
| !! | CCGGTTCGTGGTGATGGAGA+TGG | + | tig0018182:23801-23820 | Msa1364670:CDS | 60.0% |
| CGAACCTGGTTGCCCTCTGT+AGG | + | tig0018182:25441-25460 | Msa1364670:intron | 60.0% | |
| ACAGAGCCAGAGAGGGCTAG+TGG | + | tig0018182:26359-26378 | Msa1364670:intron | 60.0% | |
| ! | GAGCCAGAGAGGGCTAGTGG+CGG | + | tig0018182:26362-26381 | Msa1364670:intron | 65.0% |
| ! | CAGAGAGGGCTAGTGGCGGA+GGG | + | tig0018182:26366-26385 | Msa1364670:intron | 65.0% |
| CCTCCGCCACTAGCCCTCTC+TGG | - | tig0018182:26368-26387 | None:intergenic | 70.0% | |
| ! | CCAGAGAGGGCTAGTGGCGG+AGG | + | tig0018182:26365-26384 | Msa1364670:intron | 70.0% |
| ! | AGAGGGCTAGTGGCGGAGGG+AGG | + | tig0018182:26369-26388 | Msa1364670:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018182 | gene | 23329 | 29138 | 23329 | ID=Msa1364670;Name=Msa1364670 |
| tig0018182 | mRNA | 23329 | 29138 | 23329 | ID=Msa1364670-mRNA-1;Parent=Msa1364670;Name=Msa1364670-mRNA-1;_AED=0.06;_eAED=0.06;_QI=76|1|1|1|1|1|7|243|391 |
| tig0018182 | exon | 23329 | 24004 | 23329 | ID=Msa1364670-mRNA-1:exon:14087;Parent=Msa1364670-mRNA-1 |
| tig0018182 | exon | 24109 | 24189 | 24109 | ID=Msa1364670-mRNA-1:exon:14088;Parent=Msa1364670-mRNA-1 |
| tig0018182 | exon | 24820 | 24894 | 24820 | ID=Msa1364670-mRNA-1:exon:14089;Parent=Msa1364670-mRNA-1 |
| tig0018182 | exon | 26885 | 26929 | 26885 | ID=Msa1364670-mRNA-1:exon:14090;Parent=Msa1364670-mRNA-1 |
| tig0018182 | exon | 27026 | 27115 | 27026 | ID=Msa1364670-mRNA-1:exon:14091;Parent=Msa1364670-mRNA-1 |
| tig0018182 | exon | 27760 | 27861 | 27760 | ID=Msa1364670-mRNA-1:exon:14092;Parent=Msa1364670-mRNA-1 |
| tig0018182 | exon | 28713 | 29138 | 28713 | ID=Msa1364670-mRNA-1:exon:14093;Parent=Msa1364670-mRNA-1 |
| tig0018182 | five_prime_UTR | 23329 | 23404 | 23329 | ID=Msa1364670-mRNA-1:five_prime_utr;Parent=Msa1364670-mRNA-1 |
| tig0018182 | CDS | 23405 | 24004 | 23405 | ID=Msa1364670-mRNA-1:cds;Parent=Msa1364670-mRNA-1 |
| tig0018182 | CDS | 24109 | 24189 | 24109 | ID=Msa1364670-mRNA-1:cds;Parent=Msa1364670-mRNA-1 |
| tig0018182 | CDS | 24820 | 24894 | 24820 | ID=Msa1364670-mRNA-1:cds;Parent=Msa1364670-mRNA-1 |
| tig0018182 | CDS | 26885 | 26929 | 26885 | ID=Msa1364670-mRNA-1:cds;Parent=Msa1364670-mRNA-1 |
| tig0018182 | CDS | 27026 | 27115 | 27026 | ID=Msa1364670-mRNA-1:cds;Parent=Msa1364670-mRNA-1 |
| tig0018182 | CDS | 27760 | 27861 | 27760 | ID=Msa1364670-mRNA-1:cds;Parent=Msa1364670-mRNA-1 |
| tig0018182 | CDS | 28713 | 28895 | 28713 | ID=Msa1364670-mRNA-1:cds;Parent=Msa1364670-mRNA-1 |
| tig0018182 | three_prime_UTR | 28896 | 29138 | 28896 | ID=Msa1364670-mRNA-1:three_prime_utr;Parent=Msa1364670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
