AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0605230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0605230 MtrunA17_Chr4g0034441 98.884 448 5 0 1 448 1 448 0.0 927
Msa0605230 MtrunA17_Chr4g0034461 86.928 306 39 1 1 306 1 305 0.0 558
Msa0605230 MtrunA17_Chr4g0034471 91.176 136 12 0 313 448 1 136 2.27e-87 263
Msa0605230 MtrunA17_Chr1g0197471 77.536 138 31 0 112 249 92 229 1.17e-69 221
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0605230 AT4G34350.1 77.124 459 89 3 5 448 8 465 0.0 746

Find 122 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGACTTTGAAGGAAAA+TGG 0.141165 4_2:+50985177 Msa0605230:CDS
ATTCTTGGTGGTGAATTTAA+TGG 0.163592 4_2:+50986367 Msa0605230:CDS
CATCATAGACCAATCTATTT+AGG 0.217939 4_2:+50987866 Msa0605230:three_prime_UTR
ATTTAAATTTGCCCTTTCTA+AGG 0.245365 4_2:+50986504 Msa0605230:CDS
AACGCGGAATTCCTTCTTAC+TGG 0.255913 4_2:+50987096 Msa0605230:CDS
TTGTATGCTATTCTGTTTCC+TGG 0.263735 4_2:-50987143 None:intergenic
AGATTCTTACGGAAGAGTTT+TGG 0.268289 4_2:-50984214 None:intergenic
CCACAACCCAACTGTTAATA+AGG 0.284593 4_2:+50985344 Msa0605230:CDS
GATGTTACACCAATCCTTAA+TGG 0.325134 4_2:-50987328 None:intergenic
TTCTACCAAAGGGTCCATTA+AGG 0.329049 4_2:+50987314 Msa0605230:CDS
GTAGTCATACTGCCTGCTTT+TGG 0.349326 4_2:+50985902 Msa0605230:CDS
CAGGATGAACTTGAAATTAC+AGG 0.353442 4_2:+50987732 Msa0605230:three_prime_UTR
TTCATCAGGAAATTGTTTCC+TGG 0.355179 4_2:-50985295 None:intergenic
AGGACTATGATGCGTAAATA+TGG 0.365077 4_2:+50986725 Msa0605230:CDS
TATGTTTGCGACTATATTCT+TGG 0.365313 4_2:+50986352 Msa0605230:CDS
TCAAGGTGTTTGATTTGAAA+AGG 0.366046 4_2:+50987647 Msa0605230:CDS
CCTTGTGACCAAAGCCTTTG+CGG 0.366949 4_2:-50984258 None:intergenic
TGTTTCTTCCCTTCTCCAAT+TGG 0.369463 4_2:-50985854 None:intergenic
AATTATAACCGCAAAGGCTT+TGG 0.372584 4_2:+50984250 Msa0605230:CDS
AAATGCCTCTCTGGTTGAAC+TGG 0.377526 4_2:-50986392 None:intergenic
TCGAATGATAGTACCATTAC+TGG 0.397402 4_2:-50987944 None:intergenic
TTATTAAATGTATAAATAAC+AGG 0.399628 4_2:+50987713 Msa0605230:three_prime_UTR
TTATGTTAGTTGTTGGTGGC+TGG 0.411202 4_2:+50987033 Msa0605230:CDS
GTTCCTCGGCTATCTCTTGT+AGG 0.412759 4_2:-50987076 None:intergenic
CAAGCTGGTGGAGAAAGATA+TGG 0.419899 4_2:+50987007 Msa0605230:CDS
TTAAGACTTTGAAGGAAAAT+GGG 0.420831 4_2:+50985178 Msa0605230:CDS
CAAGGTGTTTGATTTGAAAA+GGG 0.423274 4_2:+50987648 Msa0605230:CDS
TGGGTTGTGGATAATTTCAT+TGG 0.423611 4_2:-50985331 None:intergenic
CATTCGAATATAATGAAAAC+AGG 0.423645 4_2:+50987960 Msa0605230:three_prime_UTR
CCTTATTAACAGTTGGGTTG+TGG 0.426777 4_2:-50985344 None:intergenic
CGGAGAAGAGTTTGCGGCAG+CGG 0.442341 4_2:-50984162 None:intergenic
AATATACCTTATTAACAGTT+GGG 0.443511 4_2:-50985350 None:intergenic
GAATATACCTTATTAACAGT+TGG 0.443926 4_2:-50985351 None:intergenic
GACTATACCTCGATAATTCA+TGG 0.447725 4_2:+50986148 Msa0605230:CDS
ATGGATGATCCTAAATAGAT+TGG 0.450213 4_2:-50987875 None:intergenic
CCAATCCTTAATGGACCCTT+TGG 0.452397 4_2:-50987319 None:intergenic
GTGATGCTAGCCGAATCCTT+TGG 0.452734 4_2:+50985228 Msa0605230:CDS
GCAAGAGAAAATACCTTGTC+AGG 0.454180 4_2:-50987364 None:intergenic
CACTTCTTGTGAGATTCTTA+CGG 0.455809 4_2:-50984225 None:intergenic
ATTGACAGCGAGCAAAGAAT+TGG 0.462963 4_2:+50987119 Msa0605230:CDS
TTCAAATTGCTTATGAAGCC+AGG 0.465315 4_2:+50985277 Msa0605230:CDS
CAGTTGCTACGGTTTCCTCA+TGG 0.466058 4_2:-50986180 None:intergenic
GATCTTATGTTAGTTGTTGG+TGG 0.473078 4_2:+50987029 Msa0605230:CDS
TTTAAATTTGCCCTTTCTAA+GGG 0.475566 4_2:+50986505 Msa0605230:CDS
ATGGATCTTATGTTAGTTGT+TGG 0.478899 4_2:+50987026 Msa0605230:CDS
GAAGTGCAGAATATTCCAAT+TGG 0.482048 4_2:+50985839 Msa0605230:CDS
CACAATTTGTGATGCTACTC+AGG 0.482457 4_2:+50986784 Msa0605230:CDS
CCAACAAAATCCAAAGGATT+CGG 0.483780 4_2:-50985238 None:intergenic
TTAAGGATTGGTGTAACATC+TGG 0.487090 4_2:+50987331 Msa0605230:CDS
TGACATCATTAAGACTTTGA+AGG 0.488498 4_2:+50985170 Msa0605230:CDS
AACTTGCCCGTGGGTTTCAA+AGG 0.489241 4_2:+50985982 Msa0605230:CDS
AAAATGGGTTTGAGTATACA+TGG 0.492239 4_2:+50985193 Msa0605230:CDS
AGAAGGAATTCCGCGTTCCT+CGG 0.495852 4_2:-50987090 None:intergenic
CAGAATATTCCAATTGGAGA+AGG 0.503145 4_2:+50985845 Msa0605230:CDS
TCAACTGCGGCTCCAAAAGC+AGG 0.503912 4_2:-50985914 None:intergenic
GACAGTGACCTGGTAAAACT+TGG 0.507138 4_2:+50986538 Msa0605230:CDS
CTTTCAGCATGGTGAGCTTG+TGG 0.510724 4_2:+50987279 Msa0605230:intron
AAATAGAGAACACGAGTTTG+CGG 0.512910 4_2:+50983989 None:intergenic
AGCAAAAGATGCAGTTGCTA+CGG 0.513891 4_2:-50986191 None:intergenic
AAAGAAAACTTTCTACCAAA+GGG 0.517497 4_2:+50987304 Msa0605230:CDS
AGTTGCTACGGTTTCCTCAT+GGG 0.518159 4_2:-50986179 None:intergenic
AGAAGGGAAGAAACAATTTG+AGG 0.519363 4_2:+50985862 Msa0605230:CDS
GAGTTTGCGGCAGCGGAAAG+TGG 0.522532 4_2:-50984155 None:intergenic
GATGCAGCGGCTAGAGGAGA+TGG 0.525080 4_2:+50985817 Msa0605230:intron
CCGCAAAGGCTTTGGTCACA+AGG 0.525512 4_2:+50984258 Msa0605230:CDS
GAAAGAAAACTTTCTACCAA+AGG 0.530120 4_2:+50987303 Msa0605230:CDS
TCATCCATGTATTTGTACTC+TGG 0.531351 4_2:+50987890 Msa0605230:three_prime_UTR
GGAACGTCGATACGAGTGGC+GGG 0.534181 4_2:-50984124 None:intergenic
CAGCGGAAAGTGGACGGAGA+AGG 0.537276 4_2:-50984145 None:intergenic
CGTGGAAGATGCTCTTATCA+AGG 0.542913 4_2:+50987630 Msa0605230:CDS
CTGGATCAAAGCCCTTAGAA+AGG 0.544154 4_2:-50986516 None:intergenic
CTGTCAGGACAAAGACAAAC+GGG 0.544738 4_2:-50984060 None:intergenic
ATGTCTCTATTGACCAGTAA+TGG 0.544999 4_2:+50987931 Msa0605230:three_prime_UTR
AGAAAATACCTTGTCAGGTG+TGG 0.545193 4_2:-50987359 None:intergenic
TGGATCAAAGCCCTTAGAAA+GGG 0.549420 4_2:-50986515 None:intergenic
CCAAAGGGTCCATTAAGGAT+TGG 0.551091 4_2:+50987319 Msa0605230:CDS
AATCGGCATCGGCGGAGCAA+CGG 0.555055 4_2:-50984186 None:intergenic
ACTGTCAGGACAAAGACAAA+CGG 0.556263 4_2:-50984061 None:intergenic
ACAATTTGAGGTTGTTAACA+AGG 0.556630 4_2:+50985874 Msa0605230:CDS
ATTCATTTAATATAACATTG+AGG 0.557891 4_2:-50987791 None:intergenic
AGCGAGCAAAGAATTGGTCC+AGG 0.563565 4_2:+50987125 Msa0605230:CDS
AACGGACGGAGAAGAGTTTG+CGG 0.566321 4_2:-50984168 None:intergenic
GAGCCATCGAAGATACTGTC+AGG 0.566524 4_2:-50984075 None:intergenic
ACAAGATGCTATTTACAAGC+TGG 0.568463 4_2:+50986992 Msa0605230:CDS
TGGGTCGAAATCGGCATCGG+CGG 0.571545 4_2:-50984194 None:intergenic
AAATCAGACAACAATGCTCA+AGG 0.577136 4_2:+50986567 Msa0605230:CDS
GGCATCGGCGGAGCAACGGA+CGG 0.579168 4_2:-50984182 None:intergenic
TGTCCTGACAGTATCTTCGA+TGG 0.580121 4_2:+50984072 Msa0605230:exon
ATGATTGATGCAGCGGCTAG+AGG 0.580973 4_2:+50985811 Msa0605230:intron
TCGCTGTCAATCCAGTAAGA+AGG 0.582364 4_2:-50987107 None:intergenic
TTGCGGCAGCGGAAAGTGGA+CGG 0.584275 4_2:-50984151 None:intergenic
AAATGGGTTTGAGTATACAT+GGG 0.586456 4_2:+50985194 Msa0605230:CDS
GTTTGCGACTATATTCTTGG+TGG 0.588117 4_2:+50986355 Msa0605230:CDS
CGTTGATACAACTTGCCCGT+GGG 0.588283 4_2:+50985973 Msa0605230:CDS
ATAGATACCTTTGAAACCCA+CGG 0.589835 4_2:-50985989 None:intergenic
GTATTTGTACTCTGGCTGCA+AGG 0.604813 4_2:+50987898 Msa0605230:three_prime_UTR
CTTTGATCCAGACAGTGACC+TGG 0.605562 4_2:+50986528 Msa0605230:CDS
TGGTGCATCCACACCTGACA+AGG 0.608493 4_2:+50987351 Msa0605230:CDS
AGTGAGAATTATAACCGCAA+AGG 0.609945 4_2:+50984244 Msa0605230:CDS
CAAGAGATAGCCGAGGAACG+CGG 0.611703 4_2:+50987080 Msa0605230:CDS
AGATGCTATTTACAAGCTGG+TGG 0.615477 4_2:+50986995 Msa0605230:CDS
CAATTTGAGGTTGTTAACAA+GGG 0.615513 4_2:+50985875 Msa0605230:CDS
TCGTTGATACAACTTGCCCG+TGG 0.618282 4_2:+50985972 Msa0605230:CDS
TACGAGTGGCGGGGAGACGT+AGG 0.619291 4_2:-50984114 None:intergenic
AATCAGACAACAATGCTCAA+GGG 0.621380 4_2:+50986568 Msa0605230:CDS
AGAATATTCCAATTGGAGAA+GGG 0.622085 4_2:+50985846 Msa0605230:CDS
TAGATACCTTTGAAACCCAC+GGG 0.624793 4_2:-50985988 None:intergenic
GCAGCCAGAGTACAAATACA+TGG 0.624985 4_2:-50987894 None:intergenic
AAGGGAGAGACTGAAGAGAT+CGG 0.626047 4_2:+50986586 Msa0605230:CDS
TATGATGCGTAAATATGGCG+TGG 0.636939 4_2:+50986730 Msa0605230:CDS
ATATTTACCATGAATTATCG+AGG 0.639141 4_2:-50986155 None:intergenic
GAACGTCGATACGAGTGGCG+GGG 0.640638 4_2:-50984123 None:intergenic
TTATAGGCAGACTAGTGGAG+AGG 0.648372 4_2:+50986705 Msa0605230:intron
TAGATTGGTCTATGATGACA+AGG 0.652639 4_2:-50987860 None:intergenic
CATTACAACTCGTGTAACGT+AGG 0.654962 4_2:+50987677 Msa0605230:exon
TCATGGTAAATATGCCCATG+AGG 0.657612 4_2:+50986165 Msa0605230:CDS
AGGAACGTCGATACGAGTGG+CGG 0.665289 4_2:-50984125 None:intergenic
AGAAGGAACGTCGATACGAG+TGG 0.668091 4_2:-50984128 None:intergenic
AATGGGTTTGAGTATACATG+GGG 0.674771 4_2:+50985195 Msa0605230:CDS
TGGATCCAGTTCAACCAGAG+AGG 0.678385 4_2:+50986387 Msa0605230:CDS
GGTCAACATCTCGTCAACTG+CGG 0.691748 4_2:-50985927 None:intergenic
ACACCTACAAGAGATAGCCG+AGG 0.737129 4_2:+50987073 Msa0605230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATGTAAAATAAATA+TGG + chr4_2:50985583-50985602 Msa0605230:intron 10.0%
!! AAAAGATGTAAAATAAATAT+GGG + chr4_2:50985584-50985603 Msa0605230:intron 10.0%
!! GAAATTTAAATAAACTATAT+GGG - chr4_2:50987520-50987539 None:intergenic 10.0%
!! TGAAATTTAAATAAACTATA+TGG - chr4_2:50987521-50987540 None:intergenic 10.0%
!! TTATTAAATGTATAAATAAC+AGG + chr4_2:50987713-50987732 Msa0605230:three_prime_UTR 10.0%
!! TAAAATAAATATGGGTATAT+TGG + chr4_2:50985592-50985611 Msa0605230:intron 15.0%
!! ATACATAATTGTGAAAAATA+TGG + chr4_2:50986219-50986238 Msa0605230:CDS 15.0%
!!! CAACTTTTTTATTAGAATAA+TGG - chr4_2:50986949-50986968 None:intergenic 15.0%
!! ATTCATTTAATATAACATTG+AGG - chr4_2:50987794-50987813 None:intergenic 15.0%
!! AATCTATCAGAAAAACTTAT+GGG - chr4_2:50984931-50984950 None:intergenic 20.0%
!! TAATCTATCAGAAAAACTTA+TGG - chr4_2:50984932-50984951 None:intergenic 20.0%
!!! AAGTCTTATTCAAATAAAGT+TGG - chr4_2:50984983-50985002 None:intergenic 20.0%
!! AATTTCCTGATGAAAAAATT+TGG + chr4_2:50985304-50985323 Msa0605230:CDS 20.0%
!! AATATACCTTATTAACAGTT+GGG - chr4_2:50985353-50985372 None:intergenic 20.0%
!! ACTTAACAATTGAAAAATTC+AGG - chr4_2:50985398-50985417 None:intergenic 20.0%
!!! TATGTTGTTGATCATTTTAT+AGG + chr4_2:50986689-50986708 Msa0605230:intron 20.0%
!!! TGTGAATCTATAAAAACTTT+TGG + chr4_2:50987393-50987412 Msa0605230:intron 20.0%
!! AGCATTAAAAAAACTTAGAT+TGG - chr4_2:50987581-50987600 None:intergenic 20.0%
!!! TTTGTTGTTCAATTGATTTG+TGG + chr4_2:50984671-50984690 Msa0605230:intron 25.0%
! ACGTTGAATTTCTTTAGATA+TGG + chr4_2:50984736-50984755 Msa0605230:intron 25.0%
!! ATTAAGACTTTGAAGGAAAA+TGG + chr4_2:50985177-50985196 Msa0605230:CDS 25.0%
!! TTAAGACTTTGAAGGAAAAT+GGG + chr4_2:50985178-50985197 Msa0605230:CDS 25.0%
!!! GTAATCCAAATTTTTTCATC+AGG - chr4_2:50985312-50985331 None:intergenic 25.0%
! GAATATACCTTATTAACAGT+TGG - chr4_2:50985354-50985373 None:intergenic 25.0%
! TGAAAAATTCAGGAAATTGA+AGG - chr4_2:50985388-50985407 None:intergenic 25.0%
!! TAATGTAGTGGAAAATTCAA+AGG + chr4_2:50985627-50985646 Msa0605230:intron 25.0%
!! AATGTAGTGGAAAATTCAAA+GGG + chr4_2:50985628-50985647 Msa0605230:intron 25.0%
!! ACAAAGAAATTTTCTCAAGA+AGG + chr4_2:50985667-50985686 Msa0605230:intron 25.0%
! CAATTGATCATGTAAAAAGA+CGG - chr4_2:50985773-50985792 None:intergenic 25.0%
!!! TTCTTCGATGAATTGTTTTA+AGG + chr4_2:50986093-50986112 Msa0605230:intron 25.0%
! ATATTTACCATGAATTATCG+AGG - chr4_2:50986158-50986177 None:intergenic 25.0%
!! ACAACAATATCTTCAAGTTA+AGG - chr4_2:50986297-50986316 None:intergenic 25.0%
! CAAATAATCACAACATTGAA+GGG - chr4_2:50986467-50986486 None:intergenic 25.0%
! TCAAATAATCACAACATTGA+AGG - chr4_2:50986468-50986487 None:intergenic 25.0%
! ATTTAAATTTGCCCTTTCTA+AGG + chr4_2:50986504-50986523 Msa0605230:CDS 25.0%
! TTTAAATTTGCCCTTTCTAA+GGG + chr4_2:50986505-50986524 Msa0605230:CDS 25.0%
! CTTGATGTTATTGCTTATTT+GGG + chr4_2:50986826-50986845 Msa0605230:intron 25.0%
! AAAGAAAACTTTCTACCAAA+GGG + chr4_2:50987304-50987323 Msa0605230:CDS 25.0%
!! TTTTTATAGATTCACAAGCA+AGG - chr4_2:50987389-50987408 None:intergenic 25.0%
! TTACAAAAAACTAACAAGAG+TGG - chr4_2:50987423-50987442 None:intergenic 25.0%
!! TGTGTAATGAAATATGCTTT+TGG + chr4_2:50987465-50987484 Msa0605230:intron 25.0%
! TATTATCAGCAAAAACTGAA+TGG - chr4_2:50987557-50987576 None:intergenic 25.0%
!!! TAATGCTTATTTTGCATCAT+TGG + chr4_2:50987594-50987613 Msa0605230:intron 25.0%
! CATTCGAATATAATGAAAAC+AGG + chr4_2:50987960-50987979 Msa0605230:three_prime_UTR 25.0%
!!! TTAGCGAAATTGTTTTGACT+TGG - chr4_2:50984355-50984374 None:intergenic 30.0%
TTCGCTAATTGAGTTTCTTA+TGG + chr4_2:50984367-50984386 Msa0605230:intron 30.0%
TCGCTAATTGAGTTTCTTAT+GGG + chr4_2:50984368-50984387 Msa0605230:intron 30.0%
GAAAGTAACACACTTTATGA+TGG - chr4_2:50984449-50984468 None:intergenic 30.0%
!! AAAGTGTGTTACTTTCTAGT+TGG + chr4_2:50984453-50984472 Msa0605230:intron 30.0%
!! AAGTGTGTTACTTTCTAGTT+GGG + chr4_2:50984454-50984473 Msa0605230:intron 30.0%
! TCAGAGACATTTGAGATTAA+AGG + chr4_2:50984484-50984503 Msa0605230:intron 30.0%
AATAAGTGCTTCATAGAGTT+TGG + chr4_2:50984617-50984636 Msa0605230:intron 30.0%
ACATACGATGAGAAATTTGA+TGG + chr4_2:50984641-50984660 Msa0605230:intron 30.0%
! GCTTATTTGAGTTTATCTAG+TGG + chr4_2:50984805-50984824 Msa0605230:intron 30.0%
! TGACTTATTTGAGTTTATCG+TGG - chr4_2:50984857-50984876 None:intergenic 30.0%
AAATAAGTCAATCCAAACAG+AGG + chr4_2:50984867-50984886 Msa0605230:intron 30.0%
! CTTCTGCTAACGTTTTTATT+GGG - chr4_2:50984901-50984920 None:intergenic 30.0%
TCATATAAGTGCTTCTGTAT+AGG - chr4_2:50985032-50985051 None:intergenic 30.0%
ATGCTAAACAAGCTTAATTG+AGG + chr4_2:50985061-50985080 Msa0605230:intron 30.0%
TAATGAACTAAGGTCTTCTT+TGG - chr4_2:50985094-50985113 None:intergenic 30.0%
TGACATCATTAAGACTTTGA+AGG + chr4_2:50985170-50985189 Msa0605230:CDS 30.0%
! AAAATGGGTTTGAGTATACA+TGG + chr4_2:50985193-50985212 Msa0605230:CDS 30.0%
! AAATGGGTTTGAGTATACAT+GGG + chr4_2:50985194-50985213 Msa0605230:CDS 30.0%
ATAAGTTTATCCATCAAGAG+AGG + chr4_2:50985516-50985535 Msa0605230:intron 30.0%
TAAGTTTATCCATCAAGAGA+GGG + chr4_2:50985517-50985536 Msa0605230:intron 30.0%
AAATATGGGTATATTGGTAG+AGG + chr4_2:50985598-50985617 Msa0605230:intron 30.0%
TAGAGGAACAATTAATGTAG+TGG + chr4_2:50985615-50985634 Msa0605230:intron 30.0%
! ATGTAGTGGAAAATTCAAAG+GGG + chr4_2:50985629-50985648 Msa0605230:intron 30.0%
TCAAAGGGGATCTTATAAAA+AGG + chr4_2:50985643-50985662 Msa0605230:intron 30.0%
CAAAGGGGATCTTATAAAAA+GGG + chr4_2:50985644-50985663 Msa0605230:intron 30.0%
TCAAGAAGGTCTTACATTTA+GGG + chr4_2:50985681-50985700 Msa0605230:intron 30.0%
ATCAAGTTCAAAACAACTGT+TGG - chr4_2:50985720-50985739 None:intergenic 30.0%
AGAATATTCCAATTGGAGAA+GGG + chr4_2:50985846-50985865 Msa0605230:CDS 30.0%
! ACAATTTGAGGTTGTTAACA+AGG + chr4_2:50985874-50985893 Msa0605230:CDS 30.0%
! CAATTTGAGGTTGTTAACAA+GGG + chr4_2:50985875-50985894 Msa0605230:CDS 30.0%
! TTGAACATTTTTCTCACTCA+AGG - chr4_2:50985951-50985970 None:intergenic 30.0%
!!! CGATGAATTGTTTTAAGGTA+TGG + chr4_2:50986098-50986117 Msa0605230:intron 30.0%
AATTGTGAAAAATATGGCAG+AGG + chr4_2:50986225-50986244 Msa0605230:CDS 30.0%
GCATAATTGAAAATTCATCC+AGG + chr4_2:50986324-50986343 Msa0605230:intron 30.0%
TATGTTTGCGACTATATTCT+TGG + chr4_2:50986352-50986371 Msa0605230:CDS 30.0%
!! ATTCTTGGTGGTGAATTTAA+TGG + chr4_2:50986367-50986386 Msa0605230:CDS 30.0%
!!! TTTTTTTTGCTGTGGAGTTA+AGG + chr4_2:50986614-50986633 Msa0605230:intron 30.0%
!!! TTTTTTTGCTGTGGAGTTAA+GGG + chr4_2:50986615-50986634 Msa0605230:intron 30.0%
CCAAATAAGCAATAACATCA+AGG - chr4_2:50986828-50986847 None:intergenic 30.0%
CCTTGATGTTATTGCTTATT+TGG + chr4_2:50986825-50986844 Msa0605230:intron 30.0%
! AATATGTTTTTCTGTCGCAA+TGG + chr4_2:50986911-50986930 Msa0605230:intron 30.0%
TAGAATAATGGCATACAGAA+TGG - chr4_2:50986937-50986956 None:intergenic 30.0%
GTTGAATTGAATTTCCTTTC+AGG + chr4_2:50986965-50986984 Msa0605230:intron 30.0%
ATGGATCTTATGTTAGTTGT+TGG + chr4_2:50987026-50987045 Msa0605230:CDS 30.0%
ATGTTTACTGTATCAGATCT+TGG - chr4_2:50987204-50987223 None:intergenic 30.0%
! TATCTTTTCATCTTTCAGCA+TGG + chr4_2:50987268-50987287 Msa0605230:intron 30.0%
GAAAGAAAACTTTCTACCAA+AGG + chr4_2:50987303-50987322 Msa0605230:CDS 30.0%
AAAAAACTAACAAGAGTGGA+AGG - chr4_2:50987419-50987438 None:intergenic 30.0%
!! TCAAGGTGTTTGATTTGAAA+AGG + chr4_2:50987647-50987666 Msa0605230:CDS 30.0%
!! CAAGGTGTTTGATTTGAAAA+GGG + chr4_2:50987648-50987667 Msa0605230:CDS 30.0%
!!! CTTCTAAATGTTGCTTTTTG+TGG + chr4_2:50987815-50987834 Msa0605230:three_prime_UTR 30.0%
CATCATAGACCAATCTATTT+AGG + chr4_2:50987866-50987885 Msa0605230:three_prime_UTR 30.0%
ATGGATGATCCTAAATAGAT+TGG - chr4_2:50987878-50987897 None:intergenic 30.0%
! GATTCTTACGGAAGAGTTTT+GGG - chr4_2:50984216-50984235 None:intergenic 35.0%
! AGATTCTTACGGAAGAGTTT+TGG - chr4_2:50984217-50984236 None:intergenic 35.0%
CACTTCTTGTGAGATTCTTA+CGG - chr4_2:50984228-50984247 None:intergenic 35.0%
AGTGAGAATTATAACCGCAA+AGG + chr4_2:50984244-50984263 Msa0605230:CDS 35.0%
AATTATAACCGCAAAGGCTT+TGG + chr4_2:50984250-50984269 Msa0605230:CDS 35.0%
!! GTTCAATTGATTTGTGGAGA+TGG + chr4_2:50984677-50984696 Msa0605230:intron 35.0%
! TGAGATTTTATGCCTCTGTT+TGG + chr4_2:50984778-50984797 Msa0605230:intron 35.0%
! TTTTATGCCTCTGTTTGGAT+TGG + chr4_2:50984783-50984802 Msa0605230:intron 35.0%
AAATAAGCCAATCCAAACAG+AGG - chr4_2:50984793-50984812 None:intergenic 35.0%
! GCTTCTGCTAACGTTTTTAT+TGG - chr4_2:50984902-50984921 None:intergenic 35.0%
CACACACTCATAATGAACTA+AGG - chr4_2:50985104-50985123 None:intergenic 35.0%
!! TGTGCACTTTTTGTGATTTC+AGG + chr4_2:50985147-50985166 Msa0605230:intron 35.0%
! AATGGGTTTGAGTATACATG+GGG + chr4_2:50985195-50985214 Msa0605230:CDS 35.0%
CCAACAAAATCCAAAGGATT+CGG - chr4_2:50985241-50985260 None:intergenic 35.0%
! CGAATCCTTTGGATTTTGTT+GGG + chr4_2:50985239-50985258 Msa0605230:CDS 35.0%
! GAATCCTTTGGATTTTGTTG+GGG + chr4_2:50985240-50985259 Msa0605230:CDS 35.0%
! AATCCTTTGGATTTTGTTGG+GGG + chr4_2:50985241-50985260 Msa0605230:CDS 35.0%
TTCAAATTGCTTATGAAGCC+AGG + chr4_2:50985277-50985296 Msa0605230:CDS 35.0%
TTCATCAGGAAATTGTTTCC+TGG - chr4_2:50985298-50985317 None:intergenic 35.0%
TGGGTTGTGGATAATTTCAT+TGG - chr4_2:50985334-50985353 None:intergenic 35.0%
TATACTCCGTCCCTAAATAT+AGG + chr4_2:50985418-50985437 Msa0605230:intron 35.0%
CTAAGAGGGTCCTATATTTA+GGG - chr4_2:50985431-50985450 None:intergenic 35.0%
ACTAAGAGGGTCCTATATTT+AGG - chr4_2:50985432-50985451 None:intergenic 35.0%
TTCCCATGATTTGACTAAGA+GGG - chr4_2:50985445-50985464 None:intergenic 35.0%
ATTCCCATGATTTGACTAAG+AGG - chr4_2:50985446-50985465 None:intergenic 35.0%
AAATTAACTCCCTCTCTTGA+TGG - chr4_2:50985529-50985548 None:intergenic 35.0%
CTCAAGAAGGTCTTACATTT+AGG + chr4_2:50985680-50985699 Msa0605230:intron 35.0%
TCATGTAAAAAGACGGTATG+TGG - chr4_2:50985766-50985785 None:intergenic 35.0%
GAAGTGCAGAATATTCCAAT+TGG + chr4_2:50985839-50985858 Msa0605230:CDS 35.0%
CAGAATATTCCAATTGGAGA+AGG + chr4_2:50985845-50985864 Msa0605230:CDS 35.0%
AGAAGGGAAGAAACAATTTG+AGG + chr4_2:50985862-50985881 Msa0605230:CDS 35.0%
!! ATAGATACCTTTGAAACCCA+CGG - chr4_2:50985992-50986011 None:intergenic 35.0%
! GTTGTCGAAAAGCACAAAAA+AGG + chr4_2:50986124-50986143 Msa0605230:CDS 35.0%
GACTATACCTCGATAATTCA+TGG + chr4_2:50986148-50986167 Msa0605230:CDS 35.0%
TTGTTCTTAGTTGCTGATAG+TGG + chr4_2:50986249-50986268 Msa0605230:intron 35.0%
AAATCAGACAACAATGCTCA+AGG + chr4_2:50986567-50986586 Msa0605230:CDS 35.0%
AATCAGACAACAATGCTCAA+GGG + chr4_2:50986568-50986587 Msa0605230:CDS 35.0%
!!! CGGTTAGATTTTTTTTGCTG+TGG + chr4_2:50986606-50986625 Msa0605230:intron 35.0%
! TCATTTTATAGGCAGACTAG+TGG + chr4_2:50986700-50986719 Msa0605230:intron 35.0%
AGGACTATGATGCGTAAATA+TGG + chr4_2:50986725-50986744 Msa0605230:CDS 35.0%
! ACAAGATGCTATTTACAAGC+TGG + chr4_2:50986992-50987011 Msa0605230:CDS 35.0%
GATCTTATGTTAGTTGTTGG+TGG + chr4_2:50987029-50987048 Msa0605230:CDS 35.0%
TTGTATGCTATTCTGTTTCC+TGG - chr4_2:50987146-50987165 None:intergenic 35.0%
GATGTTACACCAATCCTTAA+TGG - chr4_2:50987331-50987350 None:intergenic 35.0%
! TTAAGGATTGGTGTAACATC+TGG + chr4_2:50987331-50987350 Msa0605230:CDS 35.0%
CAGGATGAACTTGAAATTAC+AGG + chr4_2:50987732-50987751 Msa0605230:three_prime_UTR 35.0%
!! TAGATTGGTCTATGATGACA+AGG - chr4_2:50987863-50987882 None:intergenic 35.0%
TCATCCATGTATTTGTACTC+TGG + chr4_2:50987890-50987909 Msa0605230:three_prime_UTR 35.0%
ATGTCTCTATTGACCAGTAA+TGG + chr4_2:50987931-50987950 Msa0605230:three_prime_UTR 35.0%
TCGAATGATAGTACCATTAC+TGG - chr4_2:50987947-50987966 None:intergenic 35.0%
ACTGTCAGGACAAAGACAAA+CGG - chr4_2:50984064-50984083 None:intergenic 40.0%
!!! GAAGAGTTTTGGGTCGAAAT+CGG - chr4_2:50984206-50984225 None:intergenic 40.0%
TACATGCATCAGTGTCATGT+TGG - chr4_2:50984534-50984553 None:intergenic 40.0%
! CCGAATCCTTTGGATTTTGT+TGG + chr4_2:50985238-50985257 Msa0605230:CDS 40.0%
! ATCCTTTGGATTTTGTTGGG+GGG + chr4_2:50985242-50985261 Msa0605230:CDS 40.0%
! CCTTATTAACAGTTGGGTTG+TGG - chr4_2:50985347-50985366 None:intergenic 40.0%
CCACAACCCAACTGTTAATA+AGG + chr4_2:50985344-50985363 Msa0605230:CDS 40.0%
TTCAGGAAATTGAAGGCGAT+AGG - chr4_2:50985381-50985400 None:intergenic 40.0%
GACCCTCTTAGTCAAATCAT+GGG + chr4_2:50985440-50985459 Msa0605230:intron 40.0%
ACGGTATGTGGAAGAAAACA+AGG - chr4_2:50985754-50985773 None:intergenic 40.0%
TGTTTCTTCCCTTCTCCAAT+TGG - chr4_2:50985857-50985876 None:intergenic 40.0%
!! TAGATACCTTTGAAACCCAC+GGG - chr4_2:50985991-50986010 None:intergenic 40.0%
TCATGGTAAATATGCCCATG+AGG + chr4_2:50986165-50986184 Msa0605230:CDS 40.0%
AGCAAAAGATGCAGTTGCTA+CGG - chr4_2:50986194-50986213 None:intergenic 40.0%
GTTTGCGACTATATTCTTGG+TGG + chr4_2:50986355-50986374 Msa0605230:CDS 40.0%
AGCAAGATCAACTACAAGAC+AGG - chr4_2:50986437-50986456 None:intergenic 40.0%
TGGATCAAAGCCCTTAGAAA+GGG - chr4_2:50986518-50986537 None:intergenic 40.0%
! TTGCAATGCCAAGTTTTACC+AGG - chr4_2:50986549-50986568 None:intergenic 40.0%
TATGATGCGTAAATATGGCG+TGG + chr4_2:50986730-50986749 Msa0605230:CDS 40.0%
CACAATTTGTGATGCTACTC+AGG + chr4_2:50986784-50986803 Msa0605230:CDS 40.0%
! AGATGCTATTTACAAGCTGG+TGG + chr4_2:50986995-50987014 Msa0605230:CDS 40.0%
!! TTATGTTAGTTGTTGGTGGC+TGG + chr4_2:50987033-50987052 Msa0605230:CDS 40.0%
ATTGACAGCGAGCAAAGAAT+TGG + chr4_2:50987119-50987138 Msa0605230:CDS 40.0%
TTCTACCAAAGGGTCCATTA+AGG + chr4_2:50987314-50987333 Msa0605230:CDS 40.0%
AGAAAATACCTTGTCAGGTG+TGG - chr4_2:50987362-50987381 None:intergenic 40.0%
GCAAGAGAAAATACCTTGTC+AGG - chr4_2:50987367-50987386 None:intergenic 40.0%
TGCATCATTGGATTTCACAC+AGG + chr4_2:50987606-50987625 Msa0605230:intron 40.0%
CATTACAACTCGTGTAACGT+AGG + chr4_2:50987677-50987696 Msa0605230:exon 40.0%
CTGTCAGGACAAAGACAAAC+GGG - chr4_2:50984063-50984082 None:intergenic 45.0%
TGTCCTGACAGTATCTTCGA+TGG + chr4_2:50984072-50984091 Msa0605230:exon 45.0%
!! TTTTGGGTCGAAATCGGCAT+CGG - chr4_2:50984200-50984219 None:intergenic 45.0%
AACCCCCCAACAAAATCCAA+AGG - chr4_2:50985247-50985266 None:intergenic 45.0%
! ATTTTGTTGGGGGGTTGAGA+GGG + chr4_2:50985251-50985270 Msa0605230:CDS 45.0%
GAGGGTCCTATATTTAGGGA+CGG - chr4_2:50985427-50985446 None:intergenic 45.0%
GGACCCTCTTAGTCAAATCA+TGG + chr4_2:50985439-50985458 Msa0605230:intron 45.0%
GGTCTTACATTTAGGGACAG+AGG + chr4_2:50985688-50985707 Msa0605230:intron 45.0%
TGTGGAAGAAAACAAGGCAC+TGG - chr4_2:50985748-50985767 None:intergenic 45.0%
! GTGCTTGATGATTGATGCAG+CGG + chr4_2:50985804-50985823 Msa0605230:intron 45.0%
! GTAGTCATACTGCCTGCTTT+TGG + chr4_2:50985902-50985921 Msa0605230:CDS 45.0%
AGTTGCTACGGTTTCCTCAT+GGG - chr4_2:50986182-50986201 None:intergenic 45.0%
! GTAGCAACTGCATCTTTTGC+TGG + chr4_2:50986193-50986212 Msa0605230:CDS 45.0%
AGTCGCAAACATATTCAGCC+TGG - chr4_2:50986345-50986364 None:intergenic 45.0%
AAATGCCTCTCTGGTTGAAC+TGG - chr4_2:50986395-50986414 None:intergenic 45.0%
!!! AACCAGAGAGGCATTTTTCG+AGG + chr4_2:50986399-50986418 Msa0605230:CDS 45.0%
AACCTCGAAAAATGCCTCTC+TGG - chr4_2:50986404-50986423 None:intergenic 45.0%
CTGGATCAAAGCCCTTAGAA+AGG - chr4_2:50986519-50986538 None:intergenic 45.0%
! AGTTTTACCAGGTCACTGTC+TGG - chr4_2:50986538-50986557 None:intergenic 45.0%
GACAGTGACCTGGTAAAACT+TGG + chr4_2:50986538-50986557 Msa0605230:CDS 45.0%
AAGGGAGAGACTGAAGAGAT+CGG + chr4_2:50986586-50986605 Msa0605230:CDS 45.0%
TTATAGGCAGACTAGTGGAG+AGG + chr4_2:50986705-50986724 Msa0605230:intron 45.0%
CAAGCTGGTGGAGAAAGATA+TGG + chr4_2:50987007-50987026 Msa0605230:CDS 45.0%
AACGCGGAATTCCTTCTTAC+TGG + chr4_2:50987096-50987115 Msa0605230:CDS 45.0%
TCGCTGTCAATCCAGTAAGA+AGG - chr4_2:50987110-50987129 None:intergenic 45.0%
! CCAATCCTTAATGGACCCTT+TGG - chr4_2:50987322-50987341 None:intergenic 45.0%
CCAAAGGGTCCATTAAGGAT+TGG + chr4_2:50987319-50987338 Msa0605230:CDS 45.0%
ATTGGATTTCACACAGGTCG+TGG + chr4_2:50987612-50987631 Msa0605230:intron 45.0%
CGTGGAAGATGCTCTTATCA+AGG + chr4_2:50987630-50987649 Msa0605230:CDS 45.0%
GCAGCCAGAGTACAAATACA+TGG - chr4_2:50987897-50987916 None:intergenic 45.0%
GTATTTGTACTCTGGCTGCA+AGG + chr4_2:50987898-50987917 Msa0605230:three_prime_UTR 45.0%
GAGCCATCGAAGATACTGTC+AGG - chr4_2:50984078-50984097 None:intergenic 50.0%
AGAAGGAACGTCGATACGAG+TGG - chr4_2:50984131-50984150 None:intergenic 50.0%
AACGGACGGAGAAGAGTTTG+CGG - chr4_2:50984171-50984190 None:intergenic 50.0%
CCTTGTGACCAAAGCCTTTG+CGG - chr4_2:50984261-50984280 None:intergenic 50.0%
TGGGACTTTACGCCTCTGTT+TGG - chr4_2:50984882-50984901 None:intergenic 50.0%
GTGATGCTAGCCGAATCCTT+TGG + chr4_2:50985228-50985247 Msa0605230:CDS 50.0%
! GATTTTGTTGGGGGGTTGAG+AGG + chr4_2:50985250-50985269 Msa0605230:CDS 50.0%
!! GGAAGAAAACAAGGCACTGG+CGG - chr4_2:50985745-50985764 None:intergenic 50.0%
ATGATTGATGCAGCGGCTAG+AGG + chr4_2:50985811-50985830 Msa0605230:intron 50.0%
GGTCAACATCTCGTCAACTG+CGG - chr4_2:50985930-50985949 None:intergenic 50.0%
TCGTTGATACAACTTGCCCG+TGG + chr4_2:50985972-50985991 Msa0605230:CDS 50.0%
CGTTGATACAACTTGCCCGT+GGG + chr4_2:50985973-50985992 Msa0605230:CDS 50.0%
AACTTGCCCGTGGGTTTCAA+AGG + chr4_2:50985982-50986001 Msa0605230:CDS 50.0%
CAGTTGCTACGGTTTCCTCA+TGG - chr4_2:50986183-50986202 None:intergenic 50.0%
TGGATCCAGTTCAACCAGAG+AGG + chr4_2:50986387-50986406 Msa0605230:CDS 50.0%
CTTTGATCCAGACAGTGACC+TGG + chr4_2:50986528-50986547 Msa0605230:CDS 50.0%
AGCATCTTGTCGCTCCTGAA+AGG - chr4_2:50986982-50987001 None:intergenic 50.0%
ACACCTACAAGAGATAGCCG+AGG + chr4_2:50987073-50987092 Msa0605230:CDS 50.0%
GTTCCTCGGCTATCTCTTGT+AGG - chr4_2:50987079-50987098 None:intergenic 50.0%
AGAAGGAATTCCGCGTTCCT+CGG - chr4_2:50987093-50987112 None:intergenic 50.0%
AGCGAGCAAAGAATTGGTCC+AGG + chr4_2:50987125-50987144 Msa0605230:CDS 50.0%
CTTTCAGCATGGTGAGCTTG+TGG + chr4_2:50987279-50987298 Msa0605230:intron 50.0%
AGGAACGTCGATACGAGTGG+CGG - chr4_2:50984128-50984147 None:intergenic 55.0%
! CCGCAAAGGCTTTGGTCACA+AGG + chr4_2:50984258-50984277 Msa0605230:CDS 55.0%
TCAACTGCGGCTCCAAAAGC+AGG - chr4_2:50985917-50985936 None:intergenic 55.0%
CAAGAGATAGCCGAGGAACG+CGG + chr4_2:50987080-50987099 Msa0605230:CDS 55.0%
TGGTGCATCCACACCTGACA+AGG + chr4_2:50987351-50987370 Msa0605230:CDS 55.0%
GAACGTCGATACGAGTGGCG+GGG - chr4_2:50984126-50984145 None:intergenic 60.0%
GGAACGTCGATACGAGTGGC+GGG - chr4_2:50984127-50984146 None:intergenic 60.0%
CAGCGGAAAGTGGACGGAGA+AGG - chr4_2:50984148-50984167 None:intergenic 60.0%
TTGCGGCAGCGGAAAGTGGA+CGG - chr4_2:50984154-50984173 None:intergenic 60.0%
GAGTTTGCGGCAGCGGAAAG+TGG - chr4_2:50984158-50984177 None:intergenic 60.0%
CGGAGAAGAGTTTGCGGCAG+CGG - chr4_2:50984165-50984184 None:intergenic 60.0%
!! AATCGGCATCGGCGGAGCAA+CGG - chr4_2:50984189-50984208 None:intergenic 60.0%
! TGGGTCGAAATCGGCATCGG+CGG - chr4_2:50984197-50984216 None:intergenic 60.0%
GATGCAGCGGCTAGAGGAGA+TGG + chr4_2:50985817-50985836 Msa0605230:intron 60.0%
! TACGAGTGGCGGGGAGACGT+AGG - chr4_2:50984117-50984136 None:intergenic 65.0%
!! GGCATCGGCGGAGCAACGGA+CGG - chr4_2:50984185-50984204 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 50983990 50987998 50983990 ID=Msa0605230;Name=Msa0605230
chr4_2 mRNA 50983990 50987998 50983990 ID=Msa0605230-mRNA-1;Parent=Msa0605230;Name=Msa0605230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=101|1|1|1|1|1|10|305|449
chr4_2 exon 50983990 50984316 50983990 ID=Msa0605230-mRNA-1:exon:12066;Parent=Msa0605230-mRNA-1
chr4_2 exon 50985169 50985365 50985169 ID=Msa0605230-mRNA-1:exon:12067;Parent=Msa0605230-mRNA-1
chr4_2 exon 50985824 50986003 50985824 ID=Msa0605230-mRNA-1:exon:12068;Parent=Msa0605230-mRNA-1
chr4_2 exon 50986115 50986246 50986115 ID=Msa0605230-mRNA-1:exon:12069;Parent=Msa0605230-mRNA-1
chr4_2 exon 50986346 50986420 50986346 ID=Msa0605230-mRNA-1:exon:12070;Parent=Msa0605230-mRNA-1
chr4_2 exon 50986502 50986607 50986502 ID=Msa0605230-mRNA-1:exon:12071;Parent=Msa0605230-mRNA-1
chr4_2 exon 50986711 50986805 50986711 ID=Msa0605230-mRNA-1:exon:12072;Parent=Msa0605230-mRNA-1
chr4_2 exon 50986987 50987172 50986987 ID=Msa0605230-mRNA-1:exon:12073;Parent=Msa0605230-mRNA-1
chr4_2 exon 50987286 50987372 50987286 ID=Msa0605230-mRNA-1:exon:12074;Parent=Msa0605230-mRNA-1
chr4_2 exon 50987628 50987998 50987628 ID=Msa0605230-mRNA-1:exon:12075;Parent=Msa0605230-mRNA-1
chr4_2 five_prime_UTR 50983990 50984090 50983990 ID=Msa0605230-mRNA-1:five_prime_utr;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50984091 50984316 50984091 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50985169 50985365 50985169 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50985824 50986003 50985824 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50986115 50986246 50986115 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50986346 50986420 50986346 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50986502 50986607 50986502 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50986711 50986805 50986711 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50986987 50987172 50986987 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50987286 50987372 50987286 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 CDS 50987628 50987693 50987628 ID=Msa0605230-mRNA-1:cds;Parent=Msa0605230-mRNA-1
chr4_2 three_prime_UTR 50987694 50987998 50987694 ID=Msa0605230-mRNA-1:three_prime_utr;Parent=Msa0605230-mRNA-1
Gene Sequence

>Msa0605230

ATGGCTCTCTGTTCGAATCTTTGCCTACGTCTCCCCGCCACTCGTATCGACGTTCCTTCTCCGTCCACTTTCCGCTGCCGCAAACTCTTCTCCGTCCGTTGCTCCGCCGATGCCGATTTCGACCCAAAACTCTTCCGTAAGAATCTCACAAGAAGTGAGAATTATAACCGCAAAGGCTTTGGTCACAAGGAAGAGACTCTCAAACTCATGAATCGCGAGTACACAAGTGACATCATTAAGACTTTGAAGGAAAATGGGTTTGAGTATACATGGGGTAATGTCACTGTGATGCTAGCCGAATCCTTTGGATTTTGTTGGGGGGTTGAGAGGGCTGTTCAAATTGCTTATGAAGCCAGGAAACAATTTCCTGATGAAAAAATTTGGATTACCAATGAAATTATCCACAACCCAACTGTTAATAAGCGGCTAGAGGAGATGGAAGTGCAGAATATTCCAATTGGAGAAGGGAAGAAACAATTTGAGGTTGTTAACAAGGGTGATGTAGTCATACTGCCTGCTTTTGGAGCCGCAGTTGACGAGATGTTGACCTTGAGTGAGAAAAATGTTCAAATCGTTGATACAACTTGCCCGTGGGTTTCAAAGGTATGGAATGTTGTCGAAAAGCACAAAAAAGGAGACTATACCTCGATAATTCATGGTAAATATGCCCATGAGGAAACCGTAGCAACTGCATCTTTTGCTGGAAAATACATAATTGTGAAAAATATGGCAGAGGCTGAATATGTTTGCGACTATATTCTTGGTGGTGAATTTAATGGATCCAGTTCAACCAGAGAGGCATTTTTCGAGAAATTTAAATTTGCCCTTTCTAAGGGCTTTGATCCAGACAGTGACCTGGTAAAACTTGGCATTGCAAATCAGACAACAATGCTCAAGGGAGAGACTGAAGAGATCGGCAGACTAGTGGAGAGGACTATGATGCGTAAATATGGCGTGGAAAACGTTACTGAGCACTTCATAAGCTTCAACACAATTTGTGATGCTACTCAGGAGCGACAAGATGCTATTTACAAGCTGGTGGAGAAAGATATGGATCTTATGTTAGTTGTTGGTGGCTGGAACTCGAGCAACACATCACACCTACAAGAGATAGCCGAGGAACGCGGAATTCCTTCTTACTGGATTGACAGCGAGCAAAGAATTGGTCCAGGAAACAGAATAGCATACAAGTTGAATCATGGTGAGCTTGTGGAGAAAGAAAACTTTCTACCAAAGGGTCCATTAAGGATTGGTGTAACATCTGGTGCATCCACACCTGACAAGGTCGTGGAAGATGCTCTTATCAAGGTGTTTGATTTGAAAAGGGAAGAAGCATTACAACTCGTGTAA

Protein sequence

>Msa0605230

MALCSNLCLRLPATRIDVPSPSTFRCRKLFSVRCSADADFDPKLFRKNLTRSENYNRKGFGHKEETLKLMNREYTSDIIKTLKENGFEYTWGNVTVMLAESFGFCWGVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVQNIPIGEGKKQFEVVNKGDVVILPAFGAAVDEMLTLSEKNVQIVDTTCPWVSKVWNVVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKNMAEAEYVCDYILGGEFNGSSSTREAFFEKFKFALSKGFDPDSDLVKLGIANQTTMLKGETEEIGRLVERTMMRKYGVENVTEHFISFNTICDATQERQDAIYKLVEKDMDLMLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENFLPKGPLRIGVTSGASTPDKVVEDALIKVFDLKREEALQLV*