AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1308480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308480 MtrunA17_Chr8g0335141 95.541 471 21 0 1 471 1 471 0.0 920
Msa1308480 MtrunA17_Chr8g0335161 85.288 469 68 1 4 471 1 469 0.0 824
Msa1308480 MtrunA17_Chr6g0459311 72.553 470 124 3 4 471 8 474 0.0 701
Msa1308480 MtrunA17_Chr6g0486251 71.121 464 129 3 4 465 1 461 0.0 679
Msa1308480 MtrunA17_Chr6g0486201 71.121 464 129 3 4 465 1 461 0.0 679
Msa1308480 MtrunA17_Chr8g0361371 58.140 473 180 9 3 464 1 466 0.0 533
Msa1308480 MtrunA17_Chr8g0334831 55.602 482 187 10 4 465 1 475 1.00e-177 507
Msa1308480 MtrunA17_Chr7g0232411 46.203 474 243 7 4 471 1 468 1.06e-139 409
Msa1308480 MtrunA17_Chr7g0232391 46.624 474 241 7 4 471 1 468 1.67e-139 409
Msa1308480 MtrunA17_Chr7g0232341 45.570 474 245 8 4 470 1 468 8.71e-138 404
Msa1308480 MtrunA17_Chr7g0232311 47.974 469 230 9 4 466 1 461 1.45e-137 404
Msa1308480 MtrunA17_Chr7g0232401 45.895 475 239 10 4 468 1 467 3.13e-134 395
Msa1308480 MtrunA17_Chr8g0347281 45.455 462 239 8 8 465 17 469 3.26e-134 395
Msa1308480 MtrunA17_Chr7g0232331 44.397 473 250 8 4 469 1 467 1.05e-132 392
Msa1308480 MtrunA17_Chr7g0275511 44.468 470 248 9 8 470 14 477 4.85e-132 390
Msa1308480 MtrunA17_Chr8g0336741 44.754 467 247 7 10 471 14 474 1.60e-130 386
Msa1308480 MtrunA17_Chr8g0347271 43.723 462 247 8 8 465 18 470 1.80e-130 386
Msa1308480 MtrunA17_Chr8g0373301 43.841 479 247 11 3 470 1 468 1.21e-129 384
Msa1308480 MtrunA17_Chr8g0336731 44.946 465 245 7 12 471 35 493 2.26e-127 379
Msa1308480 MtrunA17_Chr1g0153451 43.340 473 256 8 4 471 1 466 6.40e-126 374
Msa1308480 MtrunA17_Chr6g0449931 45.073 477 246 10 4 471 1 470 1.38e-125 374
Msa1308480 MtrunA17_Chr8g0339451 43.949 471 248 7 12 471 1 466 4.37e-125 372
Msa1308480 MtrunA17_Chr8g0336651 46.089 473 244 7 4 471 1 467 3.70e-124 390
Msa1308480 MtrunA17_Chr8g0336651 44.161 471 248 9 10 471 782 1246 1.01e-122 387
Msa1308480 MtrunA17_Chr8g0336651 45.552 281 119 4 194 471 528 777 8.60e-69 238
Msa1308480 MtrunA17_Chr8g0336691 44.654 477 251 8 2 471 6 476 6.60e-122 387
Msa1308480 MtrunA17_Chr8g0336691 43.432 472 248 8 10 471 920 1382 3.53e-117 374
Msa1308480 MtrunA17_Chr8g0336691 40.899 467 239 8 10 471 481 915 5.62e-108 348
Msa1308480 MtrunA17_Chr8g0334861 42.283 473 253 12 4 467 1 462 3.17e-121 362
Msa1308480 MtrunA17_Chr8g0339461 41.754 479 263 7 4 471 1 474 2.73e-119 357
Msa1308480 MtrunA17_Chr8g0334851 43.396 477 244 13 4 465 1 466 2.73e-118 355
Msa1308480 MtrunA17_Chr8g0339631 42.558 477 259 8 4 471 1 471 7.09e-117 351
Msa1308480 MtrunA17_Chr8g0339441 42.348 477 221 9 4 471 1 432 2.40e-110 333
Msa1308480 MtrunA17_Chr8g0339601 48.521 338 161 6 142 471 1 333 1.50e-104 315
Msa1308480 MtrunA17_Chr7g0232351 45.431 383 199 6 4 381 1 378 4.22e-103 312
Msa1308480 MtrunA17_Chr8g0370941 38.800 500 246 18 7 465 5 485 1.56e-96 300
Msa1308480 MtrunA17_Chr5g0403641 36.364 484 250 14 3 465 53 499 4.81e-91 286
Msa1308480 MtrunA17_Chr3g0079731 35.208 480 288 9 4 464 1 476 8.18e-85 269
Msa1308480 MtrunA17_Chr6g0462531 34.864 479 273 11 7 465 2 461 5.66e-82 261
Msa1308480 MtrunA17_Chr1g0153461 57.009 214 90 2 259 471 3 215 9.20e-82 252
Msa1308480 MtrunA17_Chr6g0462521 33.121 471 278 9 7 465 2 447 8.54e-81 258
Msa1308480 MtrunA17_Chr6g0462551 33.891 478 279 12 7 465 2 461 5.55e-77 248
Msa1308480 MtrunA17_Chr5g0442541 31.513 476 293 13 6 464 2 461 2.28e-71 233
Msa1308480 MtrunA17_Chr6g0462541 31.924 473 288 9 10 465 5 460 2.30e-70 231
Msa1308480 MtrunA17_Chr5g0442491 31.677 483 304 11 6 470 2 476 8.45e-70 229
Msa1308480 MtrunA17_Chr6g0462571 31.524 479 286 12 7 465 2 458 2.32e-69 228
Msa1308480 MtrunA17_Chr2g0302991 32.704 477 283 14 10 468 6 462 3.76e-69 228
Msa1308480 MtrunA17_Chr5g0442581 32.922 486 284 17 6 464 2 472 6.42e-69 229
Msa1308480 MtrunA17_Chr5g0448521 30.849 483 301 15 6 470 2 469 2.53e-68 225
Msa1308480 MtrunA17_Chr5g0442561 31.967 488 294 16 6 470 2 474 7.90e-68 224
Msa1308480 MtrunA17_Chr2g0302961 31.818 484 281 15 10 468 6 465 2.32e-67 223
Msa1308480 MtrunA17_Chr5g0429681 31.116 466 280 13 4 449 39 483 1.26e-66 222
Msa1308480 MtrunA17_Chr5g0429711 31.667 480 287 15 1 464 3 457 2.94e-66 220
Msa1308480 MtrunA17_Chr5g0442521 30.705 482 299 14 6 464 2 471 4.90e-64 214
Msa1308480 MtrunA17_Chr5g0442601 31.161 491 298 15 6 470 401 877 1.54e-62 218
Msa1308480 MtrunA17_Chr5g0442601 33.333 318 177 8 95 404 43 333 1.64e-40 155
Msa1308480 MtrunA17_Chr4g0044511 33.002 503 264 17 5 468 36 504 9.70e-61 206
Msa1308480 MtrunA17_Chr5g0442511 28.571 476 291 14 6 464 46 489 1.84e-56 195
Msa1308480 MtrunA17_Chr8g0366391 30.242 496 287 15 10 471 10 480 3.85e-56 194
Msa1308480 MtrunA17_Chr5g0420801 30.972 494 279 17 3 469 1 459 9.80e-54 187
Msa1308480 MtrunA17_Chr6g0464881 29.150 494 280 16 2 468 4 454 1.78e-51 181
Msa1308480 MtrunA17_Chr3g0078841 29.249 506 268 22 1 457 2 466 6.48e-51 179
Msa1308480 MtrunA17_Chr5g0440421 30.488 492 284 14 6 458 7 479 1.10e-50 179
Msa1308480 MtrunA17_Chr4g0044521 30.105 475 290 14 10 464 10 462 1.21e-50 179
Msa1308480 MtrunA17_Chr3g0092641 31.337 501 262 22 8 464 11 473 1.23e-50 179
Msa1308480 MtrunA17_Chr4g0066221 29.697 495 286 18 10 468 12 480 1.35e-50 179
Msa1308480 MtrunA17_Chr7g0265141 30.629 493 265 18 12 457 12 474 4.03e-50 177
Msa1308480 MtrunA17_Chr5g0426431 32.213 506 247 23 10 464 13 473 1.43e-49 176
Msa1308480 MtrunA17_Chr3g0112771 30.947 475 276 18 10 468 13 451 1.69e-49 175
Msa1308480 MtrunA17_Chr6g0464841 29.065 492 263 18 12 468 14 454 2.62e-49 175
Msa1308480 MtrunA17_Chr5g0414331 28.364 483 283 14 10 470 14 455 3.13e-49 175
Msa1308480 MtrunA17_Chr6g0464921 29.630 486 277 17 8 468 10 455 3.21e-49 174
Msa1308480 MtrunA17_Chr6g0464871 29.697 495 262 17 12 471 26 469 3.36e-49 175
Msa1308480 MtrunA17_Chr4g0066151 36.525 282 145 9 212 468 207 479 1.72e-48 173
Msa1308480 MtrunA17_Chr7g0243871 37.329 292 154 8 193 468 194 472 1.96e-48 173
Msa1308480 MtrunA17_Chr4g0066281 37.906 277 142 8 213 468 199 466 2.03e-48 173
Msa1308480 MtrunA17_Chr6g0463861 35.971 278 152 8 212 468 201 473 2.16e-48 173
Msa1308480 MtrunA17_Chr8g0374901 30.550 491 284 18 10 468 13 478 3.88e-48 172
Msa1308480 MtrunA17_Chr7g0275681 30.162 494 274 18 4 457 7 469 5.72e-48 172
Msa1308480 MtrunA17_Chr4g0044501 32.481 391 225 12 97 468 105 475 8.91e-48 171
Msa1308480 MtrunA17_Chr5g0426401 36.624 314 159 13 173 470 20 309 1.53e-47 166
Msa1308480 MtrunA17_Chr6g0454341 28.486 502 289 19 2 464 3 473 2.00e-47 170
Msa1308480 MtrunA17_Chr7g0243781 36.860 293 157 8 193 468 194 475 2.02e-47 170
Msa1308480 MtrunA17_Chr6g0454401 27.823 496 283 18 5 457 6 469 3.31e-47 170
Msa1308480 MtrunA17_Chr5g0414321 28.247 485 297 14 2 470 4 453 3.48e-47 169
Msa1308480 MtrunA17_Chr7g0249981 28.629 496 279 19 3 470 20 468 4.72e-47 169
Msa1308480 MtrunA17_Chr7g0265051 29.741 501 288 16 3 462 1 478 5.54e-47 169
Msa1308480 MtrunA17_Chr7g0265041 30.785 497 268 19 8 457 10 477 5.61e-47 169
Msa1308480 MtrunA17_Chr4g0050341 28.911 505 285 18 7 468 17 490 1.13e-46 168
Msa1308480 MtrunA17_Chr6g0453951 28.745 494 280 18 5 457 53 515 1.45e-46 169
Msa1308480 MtrunA17_Chr1g0173121 35.254 295 176 8 181 468 176 462 1.77e-46 167
Msa1308480 MtrunA17_Chr3g0079711 48.128 187 84 3 286 464 3 184 1.92e-46 159
Msa1308480 MtrunA17_Chr8g0359821 30.143 491 273 20 6 457 7 466 2.22e-46 167
Msa1308480 MtrunA17_Chr2g0278711 30.452 509 268 20 6 468 8 476 2.72e-46 167
Msa1308480 MtrunA17_Chr8g0377921 28.571 490 280 14 10 464 5 459 3.89e-46 166
Msa1308480 MtrunA17_Chr4g0014061 33.228 316 176 8 179 470 170 474 4.73e-46 166
Msa1308480 MtrunA17_Chr7g0218811 30.340 412 242 14 65 464 67 445 6.71e-46 165
Msa1308480 MtrunA17_Chr7g0265151 31.844 358 203 12 124 457 132 472 7.08e-46 166
Msa1308480 MtrunA17_Chr8g0374971 36.823 277 149 7 213 468 209 480 8.84e-46 166
Msa1308480 MtrunA17_Chr4g0053501 30.827 399 249 12 81 468 82 464 1.14e-45 166
Msa1308480 MtrunA17_Chr4g0042891 30.217 460 284 16 10 447 8 452 1.93e-45 164
Msa1308480 MtrunA17_Chr6g0454301 28.515 505 285 19 2 464 256 726 5.07e-45 167
Msa1308480 MtrunA17_Chr6g0454301 34.335 233 125 6 236 457 3 218 6.74e-36 141
Msa1308480 MtrunA17_Chr7g0265101 29.249 506 286 19 3 462 1 480 8.61e-45 164
Msa1308480 MtrunA17_Chr2g0329111 30.126 478 260 18 4 442 1 443 9.42e-45 163
Msa1308480 MtrunA17_Chr7g0249961 36.842 247 126 6 236 470 33 261 1.10e-44 157
Msa1308480 MtrunA17_Chr1g0159551 29.442 394 242 10 82 468 95 459 1.11e-44 162
Msa1308480 MtrunA17_Chr6g0454261 29.091 495 289 17 6 464 7 475 1.53e-44 162
Msa1308480 MtrunA17_Chr6g0449991 35.484 341 187 11 4 335 1 317 1.59e-44 159
Msa1308480 MtrunA17_Chr6g0454151 35.235 298 158 12 173 457 191 466 1.75e-44 162
Msa1308480 MtrunA17_Chr8g0369341 29.522 481 303 13 3 464 1 464 1.96e-44 162
Msa1308480 MtrunA17_Chr6g0464861 29.317 498 267 22 5 468 7 453 2.17e-44 161
Msa1308480 MtrunA17_Chr4g0042931 30.864 486 283 19 10 470 8 465 2.61e-44 161
Msa1308480 MtrunA17_Chr6g0454191 29.109 505 265 22 5 457 6 469 2.76e-44 162
Msa1308480 MtrunA17_Chr4g0032331 31.056 483 259 19 10 464 9 445 5.92e-44 160
Msa1308480 MtrunA17_Chr7g0217881 28.630 489 289 15 2 464 3 457 6.85e-44 160
Msa1308480 MtrunA17_Chr4g0011051 28.205 507 283 17 1 457 1 476 1.45e-43 160
Msa1308480 MtrunA17_Chr6g0454321 27.743 483 285 19 5 451 6 460 1.67e-43 162
Msa1308480 MtrunA17_Chr6g0454201 34.007 297 165 10 173 457 192 469 3.45e-43 159
Msa1308480 MtrunA17_Chr7g0218791 28.976 459 266 13 8 443 4 425 6.26e-43 157
Msa1308480 MtrunA17_Chr4g0066261 27.273 495 308 18 6 468 7 481 6.78e-43 158
Msa1308480 MtrunA17_Chr4g0066201 33.788 293 167 7 196 468 189 474 6.84e-43 158
Msa1308480 MtrunA17_Chr7g0243771 37.818 275 141 8 213 468 212 475 8.64e-43 158
Msa1308480 MtrunA17_Chr6g0463851 33.016 315 178 11 179 471 182 485 9.10e-43 158
Msa1308480 MtrunA17_Chr8g0377941 29.436 479 279 17 10 461 8 454 1.80e-42 156
Msa1308480 MtrunA17_Chr3g0118671 28.317 505 296 18 4 470 1 477 1.87e-42 157
Msa1308480 MtrunA17_Chr3g0112761 28.870 478 293 16 3 465 1 446 2.07e-42 156
Msa1308480 MtrunA17_Chr8g0374941 35.943 281 146 9 213 468 1146 1417 2.35e-42 161
Msa1308480 MtrunA17_Chr8g0374941 34.586 266 140 9 213 453 208 464 4.79e-39 151
Msa1308480 MtrunA17_Chr8g0374941 35.636 275 145 8 213 464 673 938 5.07e-39 151
Msa1308480 MtrunA17_Chr4g0066131 33.333 279 158 9 212 468 202 474 2.84e-42 156
Msa1308480 MtrunA17_Chr3g0118691 27.879 495 297 15 4 464 10 478 3.25e-42 156
Msa1308480 MtrunA17_Chr5g0401851 28.861 395 246 8 97 470 105 485 3.34e-42 156
Msa1308480 MtrunA17_Chr7g0243801 37.455 275 142 8 213 468 213 476 3.36e-42 156
Msa1308480 MtrunA17_Chr6g0454121 31.034 377 216 13 108 464 122 474 4.81e-42 155
Msa1308480 MtrunA17_Chr6g0454181 29.175 497 272 23 6 457 7 468 6.05e-42 155
Msa1308480 MtrunA17_Chr8g0361411 29.707 478 278 18 14 469 13 454 6.20e-42 155
Msa1308480 MtrunA17_Chr8g0336331 27.237 503 287 19 5 464 6 472 6.70e-42 155
Msa1308480 MtrunA17_Chr4g0066171 27.565 497 292 17 4 468 16 476 6.91e-42 155
Msa1308480 MtrunA17_Chr5g0401721 31.105 344 200 10 142 464 139 466 7.78e-42 155
Msa1308480 MtrunA17_Chr4g0053321 35.448 268 153 8 211 468 222 479 8.27e-42 155
Msa1308480 MtrunA17_Chr7g0218821 28.193 415 241 14 65 461 68 443 8.42e-42 154
Msa1308480 MtrunA17_Chr4g0044481 35.686 255 126 5 189 431 196 424 1.03e-41 154
Msa1308480 MtrunA17_Chr6g0454131 33.224 304 172 11 173 464 190 474 1.08e-41 154
Msa1308480 MtrunA17_Chr5g0431361 27.593 482 285 16 10 468 13 453 1.10e-41 154
Msa1308480 MtrunA17_Chr3g0118721 34.848 264 142 7 214 464 39 285 1.19e-41 150
Msa1308480 MtrunA17_Chr5g0423981 31.884 345 196 12 139 464 116 440 1.59e-41 153
Msa1308480 MtrunA17_Chr8g0350881 36.429 280 146 7 213 468 209 480 1.62e-41 154
Msa1308480 MtrunA17_Chr7g0249931 29.388 490 264 21 12 468 43 483 1.75e-41 154
Msa1308480 MtrunA17_Chr2g0294941 32.970 367 198 16 113 450 14 361 1.97e-41 152
Msa1308480 MtrunA17_Chr7g0250001 27.143 490 296 18 3 471 1 450 2.29e-41 153
Msa1308480 MtrunA17_Chr1g0179901 28.571 490 284 20 10 457 17 482 2.42e-41 154
Msa1308480 MtrunA17_Chr2g0278721 27.721 487 309 13 5 470 513 977 2.97e-41 157
Msa1308480 MtrunA17_Chr2g0278721 29.067 461 275 17 5 443 11 441 6.37e-35 139
Msa1308480 MtrunA17_Chr8g0337381 54.962 131 56 2 341 471 1 128 2.99e-41 144
Msa1308480 MtrunA17_Chr6g0454271 34.237 295 154 10 180 457 4 275 5.61e-41 148
Msa1308480 MtrunA17_Chr5g0431441 29.757 494 268 20 10 469 19 467 6.41e-41 152
Msa1308480 MtrunA17_Chr3g0118771 27.397 511 297 19 2 470 14 492 7.16e-41 152
Msa1308480 MtrunA17_Chr2g0294931 35.636 275 152 7 214 468 212 481 9.44e-41 152
Msa1308480 MtrunA17_Chr7g0218311 35.145 276 155 6 212 468 213 483 9.73e-41 152
Msa1308480 MtrunA17_Chr8g0382021 36.667 270 158 6 206 468 225 488 1.01e-40 152
Msa1308480 MtrunA17_Chr6g0454141 34.667 300 159 13 173 457 191 468 1.05e-40 152
Msa1308480 MtrunA17_Chr3g0118701 27.586 493 301 17 4 464 10 478 1.27e-40 152
Msa1308480 MtrunA17_Chr7g0243631 32.317 328 188 7 164 468 170 486 1.42e-40 152
Msa1308480 MtrunA17_Chr5g0412101 30.711 394 210 14 101 464 106 466 1.51e-40 151
Msa1308480 MtrunA17_Chr7g0218831 29.630 378 231 11 94 466 90 437 1.57e-40 150
Msa1308480 MtrunA17_Chr7g0243681 33.228 316 178 8 173 468 177 479 1.65e-40 151
Msa1308480 MtrunA17_Chr4g0060511 34.767 279 148 6 213 468 220 487 2.30e-40 151
Msa1308480 MtrunA17_Chr6g0482061 28.092 477 279 17 10 448 12 462 2.38e-40 151
Msa1308480 MtrunA17_Chr8g0367221 27.500 480 303 11 10 468 1289 1744 2.56e-40 155
Msa1308480 MtrunA17_Chr8g0367221 26.872 454 289 12 10 443 799 1229 1.17e-37 147
Msa1308480 MtrunA17_Chr8g0367221 26.439 469 271 15 10 443 13 442 1.23e-35 141
Msa1308480 MtrunA17_Chr6g0453961 32.660 297 170 8 180 464 207 485 2.98e-40 151
Msa1308480 MtrunA17_Chr2g0294921 35.145 276 154 7 213 468 360 630 3.42e-40 153
Msa1308480 MtrunA17_Chr8g0380531 28.398 493 273 16 10 468 11 457 3.48e-40 150
Msa1308480 MtrunA17_Chr6g0454291 27.677 495 288 18 3 457 1 465 3.53e-40 150
Msa1308480 MtrunA17_Chr3g0122001 28.838 482 293 16 12 464 9 469 5.74e-40 154
Msa1308480 MtrunA17_Chr3g0122001 33.754 317 176 12 170 464 644 948 1.49e-36 143
Msa1308480 MtrunA17_Chr6g0454331 27.811 507 296 19 3 468 1 478 1.19e-39 149
Msa1308480 MtrunA17_Chr8g0355221 36.905 252 132 6 239 471 246 489 1.98e-39 149
Msa1308480 MtrunA17_Chr3g0118711 26.733 505 302 17 2 468 6 480 2.51e-39 148
Msa1308480 MtrunA17_Chr7g0235051 33.642 324 174 9 164 461 138 446 2.53e-39 148
Msa1308480 MtrunA17_Chr5g0412111 27.824 478 300 15 8 464 4 457 2.76e-39 147
Msa1308480 MtrunA17_Chr5g0419771 34.211 266 145 7 213 457 245 501 3.74e-39 148
Msa1308480 MtrunA17_Chr7g0243931 27.843 510 290 16 5 468 13 490 5.58e-39 147
Msa1308480 MtrunA17_Chr1g0161351 30.534 393 239 14 85 464 122 493 5.77e-39 147
Msa1308480 MtrunA17_Chr5g0419761 33.333 312 166 11 173 464 192 481 6.87e-39 147
Msa1308480 MtrunA17_Chr6g0454221 34.940 249 132 8 236 471 3 234 8.10e-39 142
Msa1308480 MtrunA17_Chr5g0428081 33.696 276 158 6 213 468 209 479 2.61e-38 145
Msa1308480 MtrunA17_Chr1g0207981 32.971 276 160 6 203 468 212 472 2.95e-38 145
Msa1308480 MtrunA17_Chr3g0118661 28.017 464 261 16 5 428 9 439 3.35e-38 145
Msa1308480 MtrunA17_Chr6g0454211 27.273 495 290 19 3 457 291 755 3.38e-38 148
Msa1308480 MtrunA17_Chr6g0454211 28.879 232 106 9 162 381 52 236 8.19e-20 92.8
Msa1308480 MtrunA17_Chr5g0412131 27.216 485 295 15 8 464 11 465 4.09e-38 144
Msa1308480 MtrunA17_Chr6g0454361 33.091 275 155 8 201 464 220 476 4.66e-38 144
Msa1308480 MtrunA17_Chr3g0106251 32.168 286 163 8 181 458 21 283 6.47e-38 140
Msa1308480 MtrunA17_Chr7g0243951 35.125 279 146 7 213 468 217 483 6.60e-38 144
Msa1308480 MtrunA17_Chr6g0452771 29.056 413 244 15 79 464 85 475 8.35e-38 144
Msa1308480 MtrunA17_Chr7g0218841 27.848 474 287 19 8 466 5 438 1.63e-37 142
Msa1308480 MtrunA17_Chr4g0072761 33.569 283 159 7 182 464 195 448 1.99e-37 142
Msa1308480 MtrunA17_Chr1g0207861 31.746 315 189 9 168 470 170 470 2.36e-37 142
Msa1308480 MtrunA17_Chr8g0374931 34.420 276 156 8 213 468 211 481 2.37e-37 143
Msa1308480 MtrunA17_Chr7g0243761 34.686 271 129 8 213 454 217 468 3.04e-37 142
Msa1308480 MtrunA17_Chr3g0098111 30.275 327 190 8 168 470 159 471 4.50e-37 142
Msa1308480 MtrunA17_Chr3g0106231 26.695 472 272 14 10 457 19 440 6.05e-37 141
Msa1308480 MtrunA17_Chr1g0207951 32.950 261 146 7 214 464 863 1104 7.49e-37 144
Msa1308480 MtrunA17_Chr1g0207951 28.453 362 203 12 124 464 240 566 1.58e-36 143
Msa1308480 MtrunA17_Chr4g0069611 28.131 487 297 17 5 470 10 464 7.52e-37 141
Msa1308480 MtrunA17_Chr1g0207971 28.645 391 223 15 96 464 93 449 8.77e-37 140
Msa1308480 MtrunA17_Chr2g0278741 28.913 460 279 16 5 444 93 524 9.42e-37 142
Msa1308480 MtrunA17_Chr3g0121991 40.000 205 115 6 260 463 343 540 1.38e-36 141
Msa1308480 MtrunA17_Chr7g0243711 38.462 221 114 4 259 468 107 316 1.77e-36 137
Msa1308480 MtrunA17_Chr8g0334841 48.227 141 70 2 179 317 6 145 2.23e-36 132
Msa1308480 MtrunA17_Chr1g0207931 32.069 290 170 8 185 464 221 493 2.68e-36 140
Msa1308480 MtrunA17_Chr7g0243851 34.875 281 145 8 213 468 175 442 2.72e-36 139
Msa1308480 MtrunA17_Chr5g0416741 28.571 406 240 12 90 468 101 483 2.97e-36 140
Msa1308480 MtrunA17_Chr8g0365811 33.086 269 163 8 206 464 692 953 3.05e-36 142
Msa1308480 MtrunA17_Chr8g0365811 31.143 350 212 11 96 430 102 437 6.40e-36 141
Msa1308480 MtrunA17_Chr6g0454171 33.829 269 128 10 203 457 66 298 3.97e-36 135
Msa1308480 MtrunA17_Chr7g0243811 36.948 249 135 8 164 404 141 375 8.16e-36 137
Msa1308480 MtrunA17_Chr5g0410941 26.369 493 308 17 10 471 24 492 9.24e-36 138
Msa1308480 MtrunA17_Chr7g0243861 36.071 280 143 7 213 468 220 487 1.53e-35 138
Msa1308480 MtrunA17_Chr1g0165701 36.087 230 125 4 252 471 269 486 2.09e-35 137
Msa1308480 MtrunA17_Chr2g0307961 27.613 507 277 16 5 468 9 468 2.12e-35 137
Msa1308480 MtrunA17_Chr7g0265111 36.052 233 122 6 244 464 294 511 3.59e-35 137
Msa1308480 MtrunA17_Chr7g0241781 27.766 461 250 17 6 444 6 405 5.28e-35 135
Msa1308480 MtrunA17_Chr5g0409591 34.559 272 149 8 213 464 212 474 6.64e-35 136
Msa1308480 MtrunA17_Chr4g0029131 26.427 473 318 13 3 468 6 455 9.22e-35 137
Msa1308480 MtrunA17_Chr6g0454351 29.032 310 183 10 163 464 180 460 1.16e-34 135
Msa1308480 MtrunA17_Chr7g0243911 41.791 201 91 6 260 448 22 208 1.62e-34 129
Msa1308480 MtrunA17_Chr3g0118751 26.667 510 269 17 4 470 1 448 2.94e-34 133
Msa1308480 MtrunA17_Chr5g0431401 26.458 480 290 17 10 468 11 448 2.97e-34 133
Msa1308480 MtrunA17_Chr7g0243611 36.957 230 113 7 213 421 78 296 3.78e-34 130
Msa1308480 MtrunA17_Chr5g0393591 30.116 259 136 6 214 470 222 437 5.36e-34 133
Msa1308480 MtrunA17_Chr5g0432731 30.742 283 168 6 193 466 31 294 7.96e-34 129
Msa1308480 MtrunA17_Chr5g0431421 30.844 308 178 9 172 468 165 448 4.17e-33 130
Msa1308480 MtrunA17_Chr4g0072771 28.532 361 224 10 109 464 130 461 1.15e-32 129
Msa1308480 MtrunA17_Chr1g0207831 28.412 359 210 11 124 464 130 459 2.94e-32 128
Msa1308480 MtrunA17_Chr2g0302851 27.061 473 267 16 5 444 11 438 2.94e-32 128
Msa1308480 MtrunA17_Chr8g0336321 34.632 231 129 5 221 442 222 439 3.37e-32 128
Msa1308480 MtrunA17_Chr6g0466831 26.598 485 296 17 10 470 19 467 1.92e-31 125
Msa1308480 MtrunA17_Chr8g0336251 34.199 231 130 5 221 442 222 439 3.35e-31 125
Msa1308480 MtrunA17_Chr5g0427571 37.566 189 106 3 254 442 97 273 5.27e-31 121
Msa1308480 MtrunA17_Chr6g0464091 27.412 456 283 14 10 444 19 447 5.71e-31 124
Msa1308480 MtrunA17_Chr6g0463891 26.200 500 300 16 10 468 13 484 9.23e-31 124
Msa1308480 MtrunA17_Chr5g0431371 31.734 271 142 8 214 468 205 448 9.24e-31 124
Msa1308480 MtrunA17_Chr7g0241801 26.813 455 262 15 6 444 6 405 1.08e-30 123
Msa1308480 MtrunA17_Chr4g0039881 33.058 242 142 5 208 443 186 413 4.47e-30 121
Msa1308480 MtrunA17_Chr8g0355011 38.202 178 93 5 268 445 178 338 4.90e-30 120
Msa1308480 MtrunA17_Chr3g0079721 28.621 290 187 8 7 280 3 288 1.45e-29 117
Msa1308480 MtrunA17_Chr5g0442501 27.244 312 210 8 6 308 2 305 1.86e-29 117
Msa1308480 MtrunA17_Chr6g0466841 25.918 490 293 19 10 470 19 467 1.94e-29 120
Msa1308480 MtrunA17_Chr3g0092031 35.714 182 103 3 262 443 6 173 2.28e-29 114
Msa1308480 MtrunA17_Chr4g0029151 24.889 450 302 12 3 442 14 437 3.58e-29 119
Msa1308480 MtrunA17_Chr6g0454371 35.838 173 94 5 285 457 4 159 6.49e-29 112
Msa1308480 MtrunA17_Chr5g0416821 27.455 499 282 19 10 468 15 473 1.85e-28 117
Msa1308480 MtrunA17_Chr8g0357361 35.500 200 108 5 213 404 63 249 1.78e-27 110
Msa1308480 MtrunA17_Chr6g0454251 28.333 420 234 20 3 381 1 394 5.52e-27 112
Msa1308480 MtrunA17_Chr1g0196851 24.485 437 309 9 10 442 50 469 1.10e-26 112
Msa1308480 MtrunA17_Chr5g0448551 24.944 449 284 17 3 428 1 419 3.77e-26 110
Msa1308480 MtrunA17_Chr4g0040691 24.661 442 300 13 10 441 9 427 4.22e-26 110
Msa1308480 MtrunA17_Chr4g0066141 35.583 163 94 3 320 471 192 354 6.21e-26 108
Msa1308480 MtrunA17_Chr2g0283041 27.615 239 161 3 208 446 206 432 8.12e-26 109
Msa1308480 MtrunA17_Chr8g0336261 36.000 150 79 5 282 431 1 133 8.14e-25 99.8
Msa1308480 MtrunA17_Chr5g0431431 30.350 257 145 7 173 424 116 343 1.38e-23 101
Msa1308480 MtrunA17_Chr7g0231631 31.449 283 139 9 211 468 7 259 5.94e-23 98.2
Msa1308480 MtrunA17_Chr6g0454231 27.451 255 124 7 211 457 5 206 1.06e-22 100
Msa1308480 MtrunA17_Chr4g0040711 23.583 441 306 11 10 441 9 427 1.95e-22 99.8
Msa1308480 MtrunA17_Chr4g0029161 24.843 479 292 16 2 468 5 427 2.70e-22 99.0
Msa1308480 MtrunA17_Chr5g0442551 27.027 296 178 11 68 351 25 294 1.38e-21 94.7
Msa1308480 MtrunA17_Chr2g0319801 26.281 449 284 17 10 441 9 427 1.95e-21 96.7
Msa1308480 MtrunA17_Chr1g0207881 34.437 151 89 4 317 464 237 380 8.17e-20 91.3
Msa1308480 MtrunA17_Chr2g0319791 24.385 447 295 17 10 441 9 427 5.04e-19 89.4
Msa1308480 MtrunA17_Chr2g0319761 33.514 185 110 3 262 443 259 433 1.17e-18 88.2
Msa1308480 MtrunA17_Chr2g0321331 30.144 209 114 4 267 470 91 272 1.62e-18 85.5
Msa1308480 MtrunA17_Chr2g0319731 25.721 451 284 17 10 441 26 444 3.78e-18 86.7
Msa1308480 MtrunA17_Chr2g0319751 34.973 183 106 4 260 441 734 904 4.80e-18 87.4
Msa1308480 MtrunA17_Chr2g0319751 37.607 117 70 2 326 441 289 403 1.93e-16 82.4
Msa1308480 MtrunA17_Chr6g0469961 37.500 144 71 6 172 302 27 164 1.12e-17 80.5
Msa1308480 MtrunA17_Chr7g0243731 47.887 71 37 0 335 405 2 72 1.50e-17 77.4
Msa1308480 MtrunA17_Chr6g0449971 52.000 75 35 1 391 465 1 74 6.95e-17 75.5
Msa1308480 MtrunA17_Chr6g0453941 27.136 199 129 6 135 321 77 271 8.01e-16 77.8
Msa1308480 MtrunA17_Chr6g0453981 31.507 146 86 5 173 306 61 204 1.12e-13 70.5
Msa1308480 MtrunA17_Chr6g0454391 46.269 67 31 2 358 424 13 74 1.14e-13 67.8
Msa1308480 MtrunA17_Chr7g0250021 28.528 326 174 17 12 307 15 311 3.42e-13 70.5
Msa1308480 MtrunA17_Chr6g0454111 32.593 135 78 4 180 302 50 183 5.74e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308480 AT4G01070.1 45.085 468 243 10 5 465 4 464 5.77e-133 393
Msa1308480 AT1G01420.2 45.708 466 236 12 8 465 10 466 8.61e-130 385
Msa1308480 AT1G01420.1 45.708 466 236 12 8 465 7 463 8.72e-130 385
Msa1308480 AT1G01390.1 45.279 466 237 12 8 464 7 463 1.75e-117 353
Msa1308480 AT1G01390.2 45.279 466 237 12 8 464 24 480 2.30e-117 353
Msa1308480 AT3G50740.1 38.174 482 267 12 3 465 1 470 2.73e-99 306
Msa1308480 AT5G26310.1 36.810 489 272 15 1 471 1 470 2.31e-96 299
Msa1308480 AT5G66690.1 36.864 472 265 13 1 457 1 454 5.01e-92 288
Msa1308480 AT2G18570.1 35.908 479 277 16 7 469 3 467 8.26e-83 263
Msa1308480 AT4G36770.1 35.463 454 265 13 11 450 6 445 6.81e-80 256
Msa1308480 AT3G16520.3 35.684 468 270 12 10 464 6 455 3.26e-79 254
Msa1308480 AT1G07260.1 33.682 478 275 13 14 468 13 471 2.07e-77 249
Msa1308480 AT4G01070.2 41.880 351 189 10 5 348 4 346 5.93e-77 244
Msa1308480 AT3G16520.2 35.153 458 266 12 10 454 6 445 4.95e-75 243
Msa1308480 AT3G16520.1 34.573 457 270 11 10 454 6 445 6.57e-75 243
Msa1308480 AT2G18560.1 39.005 382 208 11 97 467 8 375 2.20e-74 239
Msa1308480 AT1G07250.1 31.633 490 292 13 4 468 1 472 6.63e-73 238
Msa1308480 AT3G21790.1 33.125 480 286 12 10 464 5 474 1.59e-72 238
Msa1308480 AT3G21780.1 34.461 473 273 13 10 461 5 461 2.61e-70 231
Msa1308480 AT3G21800.1 33.264 481 285 14 4 461 1 468 8.29e-70 230
Msa1308480 AT3G21750.1 31.847 471 288 8 10 461 5 461 4.22e-68 225
Msa1308480 AT4G15280.1 32.017 481 285 15 10 464 5 469 4.81e-68 225
Msa1308480 AT4G15280.2 32.017 481 285 15 10 464 37 501 7.14e-68 226
Msa1308480 AT2G29750.1 30.992 484 290 17 10 468 9 473 1.38e-66 221
Msa1308480 AT2G29730.1 29.325 474 295 14 10 464 6 458 1.93e-66 221
Msa1308480 AT2G29740.1 31.635 471 283 14 10 457 9 463 1.29e-65 219
Msa1308480 AT4G15260.1 34.916 358 215 7 117 464 1 350 2.72e-64 212
Msa1308480 AT1G07240.1 30.675 489 282 13 6 460 2 467 5.05e-63 212
Msa1308480 AT3G21760.1 32.720 489 272 15 10 461 5 473 1.46e-62 211
Msa1308480 AT2G29710.1 29.574 470 293 14 10 461 6 455 2.63e-62 210
Msa1308480 AT5G14860.1 32.238 487 278 13 12 468 11 475 9.56e-57 196
Msa1308480 AT4G34131.1 29.817 493 290 15 5 464 6 475 2.50e-56 194
Msa1308480 AT2G15490.1 30.170 411 260 9 74 470 85 482 8.92e-56 193
Msa1308480 AT2G15490.3 30.657 411 255 10 74 470 85 479 2.52e-55 192
Msa1308480 AT2G16890.2 31.211 487 278 15 10 468 10 467 5.78e-55 191
Msa1308480 AT2G15480.1 30.549 419 256 10 64 470 87 482 6.10e-54 188
Msa1308480 AT2G36800.1 29.697 495 280 15 12 464 15 483 1.11e-53 187
Msa1308480 AT2G15480.2 30.303 429 254 11 64 470 87 492 3.39e-53 186
Msa1308480 AT4G34135.1 30.321 498 282 13 5 464 7 477 1.34e-52 184
Msa1308480 AT1G05675.1 29.545 484 286 14 4 466 1 450 5.40e-52 182
Msa1308480 AT1G05680.1 28.782 476 300 11 4 466 1 450 7.61e-52 182
Msa1308480 AT1G22340.1 31.028 506 272 22 6 468 10 481 6.01e-51 180
Msa1308480 AT4G34138.1 30.576 399 222 9 93 468 112 478 1.05e-50 179
Msa1308480 AT2G36770.1 28.834 489 291 17 12 464 17 484 1.30e-50 179
Msa1308480 AT1G10400.1 30.909 495 270 19 10 470 8 464 4.76e-50 177
Msa1308480 AT1G22400.1 30.200 500 286 21 5 468 9 481 1.75e-49 176
Msa1308480 AT2G36780.1 33.056 360 207 10 125 464 139 484 1.82e-49 176
Msa1308480 AT2G36760.1 30.228 483 278 17 12 457 17 477 3.24e-49 176
Msa1308480 AT3G53160.1 38.376 271 139 6 213 464 217 478 1.10e-48 174
Msa1308480 AT2G36750.1 28.800 500 276 16 12 464 13 479 1.33e-48 174
Msa1308480 AT2G43820.1 28.629 496 278 18 3 470 1 448 1.85e-48 172
Msa1308480 AT2G16890.3 30.856 444 251 14 10 426 10 424 2.36e-48 172
Msa1308480 AT2G31790.1 35.294 306 154 10 184 468 174 456 3.98e-48 172
Msa1308480 AT2G36790.1 29.741 501 271 16 12 464 16 483 2.05e-47 171
Msa1308480 AT5G03490.1 29.424 486 275 18 5 464 15 458 4.79e-47 169
Msa1308480 AT1G22380.1 29.461 482 275 19 6 451 10 462 6.17e-47 169
Msa1308480 AT2G43840.2 27.664 488 277 16 10 469 8 447 2.12e-46 167
Msa1308480 AT3G55700.1 30.146 481 281 19 10 471 9 453 4.41e-46 166
Msa1308480 AT2G43840.1 27.459 488 278 16 10 469 8 447 2.53e-45 164
Msa1308480 AT1G22360.1 28.797 507 281 21 6 468 7 477 2.85e-45 165
Msa1308480 AT3G46700.1 27.824 478 305 12 1 470 1 446 7.35e-45 163
Msa1308480 AT3G53150.1 32.552 384 189 12 125 464 148 505 1.28e-44 164
Msa1308480 AT2G31750.1 34.420 276 141 8 211 468 201 454 2.01e-44 162
Msa1308480 AT2G31750.2 34.420 276 141 8 211 468 201 454 4.46e-44 162
Msa1308480 AT3G46680.1 27.824 478 302 15 1 466 1 447 8.59e-44 160
Msa1308480 AT2G30140.2 28.059 474 293 13 10 470 14 452 1.35e-43 159
Msa1308480 AT2G23260.1 28.085 470 286 11 10 461 11 446 2.08e-43 159
Msa1308480 AT1G78270.1 29.569 487 272 19 5 452 9 463 2.89e-43 159
Msa1308480 AT2G30140.1 28.842 475 289 16 10 470 14 453 9.87e-43 157
Msa1308480 AT2G36970.1 26.453 499 302 16 5 470 6 472 1.27e-42 157
Msa1308480 AT1G24100.1 28.571 490 282 14 7 468 9 458 2.24e-42 156
Msa1308480 AT3G55710.1 29.046 482 289 16 10 471 9 457 8.52e-42 155
Msa1308480 AT3G46690.1 26.899 487 303 15 1 470 1 451 9.86e-42 154
Msa1308480 AT1G05530.1 28.151 476 304 15 7 468 3 454 2.83e-41 153
Msa1308480 AT2G23250.1 30.990 313 190 5 164 468 141 435 5.44e-41 152
Msa1308480 AT5G17050.1 28.463 397 257 8 79 470 84 458 9.57e-41 152
Msa1308480 AT5G05880.1 32.997 297 178 7 179 471 172 451 1.18e-40 151
Msa1308480 AT3G46650.1 29.712 451 266 18 39 471 11 428 2.19e-40 150
Msa1308480 AT1G05560.1 27.426 474 297 16 8 464 4 447 2.32e-40 151
Msa1308480 AT5G59580.1 27.721 487 293 15 1 468 1 447 2.48e-40 150
Msa1308480 AT1G05560.2 27.426 474 297 16 8 464 54 497 5.01e-40 151
Msa1308480 AT1G22360.2 28.541 473 261 20 6 432 7 448 5.57e-40 150
Msa1308480 AT1G51210.1 28.256 453 273 16 7 444 18 433 1.15e-39 148
Msa1308480 AT1G22370.2 31.106 479 266 19 6 451 10 457 2.71e-39 148
Msa1308480 AT5G38040.1 27.451 459 293 16 20 468 21 449 3.35e-39 147
Msa1308480 AT5G12890.1 29.424 486 279 20 10 457 11 470 3.47e-39 148
Msa1308480 AT5G59590.1 26.638 473 307 15 6 468 7 449 1.46e-38 145
Msa1308480 AT1G22370.1 36.755 302 158 11 165 451 4 287 1.49e-38 142
Msa1308480 AT5G38010.1 27.917 480 288 16 10 468 11 453 1.67e-38 145
Msa1308480 AT1G73880.1 29.158 487 287 20 5 464 7 462 8.12e-38 144
Msa1308480 AT1G30530.1 31.124 347 205 10 120 457 118 439 1.07e-37 143
Msa1308480 AT3G11340.1 27.383 493 290 17 1 471 1 447 1.07e-37 143
Msa1308480 AT3G46660.1 27.696 473 297 19 4 461 6 448 2.59e-37 142
Msa1308480 AT4G15550.1 32.964 361 216 12 113 464 126 469 4.81e-37 142
Msa1308480 AT3G21560.1 30.216 278 170 6 201 468 209 472 1.13e-36 141
Msa1308480 AT5G05890.1 33.333 297 177 8 179 471 176 455 1.25e-36 140
Msa1308480 AT3G46670.1 30.939 362 214 12 110 461 106 441 1.33e-36 140
Msa1308480 AT5G49690.1 26.211 454 277 12 10 441 11 428 3.23e-36 139
Msa1308480 AT2G30150.2 26.809 470 294 14 10 464 14 448 3.33e-36 139
Msa1308480 AT4G15490.1 26.220 492 296 16 10 468 9 466 3.37e-36 140
Msa1308480 AT2G26480.1 31.302 361 216 11 113 464 104 441 4.22e-36 139
Msa1308480 AT2G30150.1 26.981 467 291 14 13 464 1 432 4.64e-36 139
Msa1308480 AT4G15500.1 26.547 501 296 17 1 468 1 462 1.08e-35 138
Msa1308480 AT5G17030.1 27.160 405 253 10 81 471 82 458 2.74e-35 137
Msa1308480 AT2G28080.1 31.065 338 208 12 125 456 142 460 3.03e-35 137
Msa1308480 AT5G05860.1 32.432 259 157 5 213 468 204 447 7.38e-35 135
Msa1308480 AT4G15480.1 31.439 264 160 5 214 468 227 478 2.68e-34 134
Msa1308480 AT3G02100.1 26.022 465 278 15 7 443 11 437 6.05e-34 133
Msa1308480 AT1G06000.1 35.448 268 150 8 213 468 177 433 1.03e-33 132
Msa1308480 AT5G05870.1 34.188 234 135 5 239 468 236 454 1.30e-33 132
Msa1308480 AT5G65550.1 25.442 452 275 14 10 433 10 427 1.39e-33 132
Msa1308480 AT4G14090.1 31.873 251 145 8 214 457 213 444 1.53e-33 132
Msa1308480 AT3G46720.1 26.819 481 288 15 6 468 6 440 4.07e-33 130
Msa1308480 AT5G05900.1 29.630 297 182 7 179 471 177 450 3.90e-32 128
Msa1308480 AT5G17040.1 26.492 419 247 14 59 457 51 428 1.59e-31 126
Msa1308480 AT2G22590.1 30.769 247 156 6 203 444 210 446 1.23e-29 121
Msa1308480 AT5G17040.2 28.931 318 195 8 148 457 32 326 3.64e-29 117
Msa1308480 AT5G54010.1 25.734 443 285 12 4 434 1 411 9.10e-29 118
Msa1308480 AT1G64910.1 25.678 479 287 18 12 466 9 442 1.14e-28 118
Msa1308480 AT4G27570.1 25.513 439 278 14 10 434 8 411 2.83e-28 117
Msa1308480 AT1G50580.1 25.259 483 306 14 4 470 1 444 3.01e-28 117
Msa1308480 AT3G29630.1 25.051 487 304 16 4 470 1 446 9.81e-28 115
Msa1308480 AT5G53990.1 26.244 442 262 17 12 434 9 405 3.03e-27 114
Msa1308480 AT3G22250.1 31.381 239 125 9 220 446 231 442 3.85e-27 114
Msa1308480 AT4G27560.1 24.554 448 271 14 10 434 8 411 2.39e-26 111
Msa1308480 AT3G29630.2 32.589 224 129 5 252 470 214 420 6.33e-26 110
Msa1308480 AT5G37950.1 29.965 287 174 9 104 382 77 344 8.78e-26 108
Msa1308480 AT5G37950.2 30.035 283 173 9 104 382 77 338 1.12e-25 107
Msa1308480 AT2G22930.1 23.516 438 279 13 12 434 9 405 6.36e-25 107
Msa1308480 AT5G54060.1 25.170 441 304 9 10 442 14 436 2.50e-24 105
Msa1308480 AT4G09500.1 30.093 216 130 5 246 452 200 403 1.10e-22 100
Msa1308480 AT4G09500.2 30.846 201 118 5 261 452 240 428 6.66e-22 98.2
Msa1308480 AT1G64920.1 29.060 234 146 6 212 439 195 414 9.82e-22 97.8
Msa1308480 AT4G34135.2 25.970 335 200 10 5 306 7 326 2.43e-19 89.4
Msa1308480 AT2G16890.4 25.240 313 195 12 10 297 10 308 2.11e-11 65.5
Msa1308480 AT2G16890.1 25.240 313 195 12 10 297 10 308 2.11e-11 65.5

Find 89 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTAATTCAATGTGTTTA+AGG 0.145467 8_4:+4759778 Msa1308480:CDS
TTGGAAAGAAACAGAGAAAA+TGG 0.199325 8_4:+4760014 Msa1308480:CDS
CATAAACACTTTCAATGATT+TGG 0.223134 8_4:+4759662 Msa1308480:CDS
ATTCAACTTGTGGAATTAAA+TGG 0.235675 8_4:-4759074 None:intergenic
TAAAGAAACAAGGTTAGTTT+TGG 0.255731 8_4:-4759334 None:intergenic
TCTGTTCTTTATGTATGTTT+TGG 0.258567 8_4:+4759825 Msa1308480:CDS
ATTTGGAACCTGAGGTTATA+AGG 0.303175 8_4:+4759679 Msa1308480:CDS
GTATTTACCAAATGGTTTCT+TGG 0.330315 8_4:+4759995 Msa1308480:CDS
CAGAAATTCTCATTAGTTGA+TGG 0.334388 8_4:+4759633 Msa1308480:CDS
CAACTCGATGAGTTAGCATT+TGG 0.339282 8_4:+4759873 Msa1308480:CDS
ACTTTGGAGAGTGTGGTTAA+TGG 0.345363 8_4:+4760125 Msa1308480:CDS
AATTAGACTCATTTCTGTTA+AGG 0.345841 8_4:-4759746 None:intergenic
TTCAAGACTTGTTGCATTGA+AGG 0.352291 8_4:-4759171 None:intergenic
ATTAGACTCATTTCTGTTAA+GGG 0.364012 8_4:-4759745 None:intergenic
CTTGGTCATGGTTCAATTGG+TGG 0.364820 8_4:+4760074 Msa1308480:CDS
TTCAATGTGTTTAAGGTGGT+TGG 0.369384 8_4:+4759785 Msa1308480:CDS
GCACCACAAGTTGAGATTCT+TGG 0.370993 8_4:+4760056 Msa1308480:CDS
TATGAAACTGTGAATGTTCC+AGG 0.372485 8_4:+4759519 Msa1308480:CDS
TTGACTTCTTGTTGTAGAAA+TGG 0.373174 8_4:-4759300 None:intergenic
TTTCTTTCCAAGAAACCATT+TGG 0.377931 8_4:-4760002 None:intergenic
ATGAGTTTCATTTGTGCTGC+TGG 0.399299 8_4:-4759261 None:intergenic
GATCAGGAATATCTTTGATA+TGG 0.402947 8_4:-4759557 None:intergenic
TCATTTGTGCTGCTGGATCA+TGG 0.407127 8_4:-4759254 None:intergenic
ATTGCTATGGTTCCTTCCCC+TGG 0.414104 8_4:+4759045 Msa1308480:CDS
AATAGAGGCCACGCAATCAT+AGG 0.415417 8_4:-4760152 None:intergenic
ATTCTTGGTCATGGTTCAAT+TGG 0.416708 8_4:+4760071 Msa1308480:CDS
ATCCTTTGTTCTGCAAATAG+AGG 0.418095 8_4:-4760167 None:intergenic
GCAGAGTTAACAGCTTTACT+TGG 0.420196 8_4:-4759939 None:intergenic
CCGAAGATTGATGATGAAAG+TGG 0.440742 8_4:+4760233 Msa1308480:CDS
GCTGTTGCAACAAGTGAAAA+TGG 0.443145 8_4:+4760359 Msa1308480:CDS
CCACTTTCATCATCAATCTT+CGG 0.444906 8_4:-4760233 None:intergenic
GAAATAGAGTCGTTGAGAAT+CGG 0.447307 8_4:-4759468 None:intergenic
GGAATATCTTTGATATGGTA+AGG 0.448112 8_4:-4759552 None:intergenic
AGAAGAATGAAGTCTATGTT+TGG 0.449759 8_4:-4759204 None:intergenic
CCGTTAGAGTATTTACCAAA+TGG 0.450358 8_4:+4759987 Msa1308480:CDS
ATGGATTGGTTGTTCCATCA+TGG 0.450594 8_4:+4760033 Msa1308480:CDS
TTGTGGTTGGGGTTCAACTT+TGG 0.450652 8_4:+4760109 Msa1308480:CDS
AAGAAGTTGCTAACTGTGTA+AGG 0.451651 8_4:+4760270 Msa1308480:CDS
GTGGCTATGAAGTAATTGTT+TGG 0.451788 8_4:-4759100 None:intergenic
CTTTCACATAGAAGTGGATC+AGG 0.460832 8_4:-4759573 None:intergenic
TGAAGAAGCCTTATAACCTC+AGG 0.481252 8_4:-4759687 None:intergenic
TGTTGCATTGAAGGAGTAAG+AGG 0.485388 8_4:-4759162 None:intergenic
CATGGAAGGTGATGAAAGCT+TGG 0.494784 8_4:+4760298 Msa1308480:CDS
TGGATTGGTTGTTCCATCAT+GGG 0.505053 8_4:+4760034 Msa1308480:CDS
TGAAAATGGTTCATCTAAGA+AGG 0.509696 8_4:+4760373 Msa1308480:CDS
GGGTTCAACTTTGGAGAGTG+TGG 0.511321 8_4:+4760118 Msa1308480:CDS
CAAGTTGAGATTCTTGGTCA+TGG 0.513039 8_4:+4760062 Msa1308480:CDS
CATACATAAAGAACAGAACT+TGG 0.526486 8_4:-4759819 None:intergenic
CTTGATCTTTCACATAGAAG+TGG 0.528439 8_4:-4759579 None:intergenic
GGAATTAAATGGCTAAGTCC+AGG 0.532715 8_4:-4759063 None:intergenic
TGTTTGGCAAATTCAACTTG+TGG 0.534373 8_4:-4759084 None:intergenic
GGAAATACAAAAGAGAATCA+AGG 0.536941 8_4:+4760319 Msa1308480:CDS
TTTCTGTTAAGGGGTCCCAC+TGG 0.538371 8_4:-4759735 None:intergenic
TCAACTTGTGGTGCCCATGA+TGG 0.543506 8_4:-4760047 None:intergenic
GAATTAAATGGCTAAGTCCA+GGG 0.544089 8_4:-4759062 None:intergenic
GGAGTAAGAGGACCAAGTGT+TGG 0.547872 8_4:-4759150 None:intergenic
AAGAAACAGAGAAAATGGAT+TGG 0.554526 8_4:+4760019 Msa1308480:CDS
GAGTGGCAAGAAATTCTTGT+GGG 0.556381 8_4:+4759905 Msa1308480:CDS
AGAGTGAGACAAAACGATGT+TGG 0.561014 8_4:-4759444 None:intergenic
ACATTCATCATTCCAACACT+TGG 0.561131 8_4:+4759138 Msa1308480:CDS
TTAGACTCATTTCTGTTAAG+GGG 0.563399 8_4:-4759744 None:intergenic
TTAATTCAATGTGTTTAAGG+TGG 0.567516 8_4:+4759781 Msa1308480:CDS
TCTCAACGACTCTATTTCCT+CGG 0.572473 8_4:+4759473 Msa1308480:CDS
ATGCAATCTCGATGCTAAAG+AGG 0.573771 8_4:-4760402 None:intergenic
CGATGTTGGAACAGCTCCTG+AGG 0.581304 8_4:-4759430 None:intergenic
GCATTTGGATTAGAATTGAG+TGG 0.583901 8_4:+4759888 Msa1308480:CDS
CCATTTGGTAAATACTCTAA+CGG 0.585513 8_4:-4759987 None:intergenic
AGAATCAAGGAATTGAGTGT+TGG 0.586449 8_4:+4760332 Msa1308480:CDS
AGAATGAAGTCTATGTTTGG+TGG 0.586802 8_4:-4759201 None:intergenic
ATTATTGACAGATGAGCTCA+AGG 0.593411 8_4:+4760199 Msa1308480:CDS
TTTCAATGATTTGGAACCTG+AGG 0.594195 8_4:+4759671 Msa1308480:CDS
GAATATCTTTGATATGGTAA+GGG 0.608277 8_4:-4759551 None:intergenic
CTCTAAGAACTCTATTTCCG+AGG 0.608476 8_4:-4759490 None:intergenic
ACATAAAGAACAGAACTTGG+TGG 0.614992 8_4:-4759816 None:intergenic
TGGTAAGGGACTATACTACC+TGG 0.618036 8_4:-4759537 None:intergenic
GGCCTCTATTTGCAGAACAA+AGG 0.622122 8_4:+4760165 Msa1308480:CDS
CGAAGATTGATGATGAAAGT+GGG 0.623137 8_4:+4760234 Msa1308480:CDS
TACTAAAGATTAAAGAAACA+AGG 0.633815 8_4:-4759344 None:intergenic
GAAGGAACCATAGCAATACA+TGG 0.645022 8_4:-4759039 None:intergenic
TAACTGTGTAAGGAGAATCA+TGG 0.649948 8_4:+4760280 Msa1308480:CDS
ATGGTGTTCCTATGATTGCG+TGG 0.650757 8_4:+4760144 Msa1308480:CDS
AAATGGCTAAGTCCAGGGGA+AGG 0.656957 8_4:-4759057 None:intergenic
TGACCAAGAATCTCAACTTG+TGG 0.660415 8_4:-4760059 None:intergenic
TGTGTAAGGAGAATCATGGA+AGG 0.676421 8_4:+4760284 Msa1308480:CDS
TGAGTGGCAAGAAATTCTTG+TGG 0.685840 8_4:+4759904 Msa1308480:CDS
ATGAGCTCAAGGTGGCTGTG+AGG 0.692118 8_4:+4760210 Msa1308480:CDS
AATTAAATGGCTAAGTCCAG+GGG 0.708782 8_4:-4759061 None:intergenic
ATGTGACAATGAATTCATTG+TGG 0.721882 8_4:-4759119 None:intergenic
ATTGACAGATGAGCTCAAGG+TGG 0.752715 8_4:+4760202 Msa1308480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTAAAGATTAAAGAAACA+AGG - chr8_4:4759347-4759366 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG + chr8_4:4759778-4759797 Msa1308480:CDS 20.0%
!! TACTAAAGATTAAAGAAACA+AGG - chr8_4:4759347-4759366 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG + chr8_4:4759778-4759797 Msa1308480:CDS 20.0%
! TAAAAAACCATGTATTGCTA+TGG + chr8_4:4759032-4759051 Msa1308480:CDS 25.0%
! ATTCAACTTGTGGAATTAAA+TGG - chr8_4:4759077-4759096 None:intergenic 25.0%
!!! TGTTGAATGTTTTTTACTTG+AGG - chr8_4:4759231-4759250 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG - chr8_4:4759337-4759356 None:intergenic 25.0%
! GAATATCTTTGATATGGTAA+GGG - chr8_4:4759554-4759573 None:intergenic 25.0%
! CATAAACACTTTCAATGATT+TGG + chr8_4:4759662-4759681 Msa1308480:CDS 25.0%
! ATTAGACTCATTTCTGTTAA+GGG - chr8_4:4759748-4759767 None:intergenic 25.0%
! AATTAGACTCATTTCTGTTA+AGG - chr8_4:4759749-4759768 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG + chr8_4:4759781-4759800 Msa1308480:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG + chr8_4:4759825-4759844 Msa1308480:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG + chr8_4:4759826-4759845 Msa1308480:CDS 25.0%
! TAAAAAACCATGTATTGCTA+TGG + chr8_4:4759032-4759051 Msa1308480:CDS 25.0%
! ATTCAACTTGTGGAATTAAA+TGG - chr8_4:4759077-4759096 None:intergenic 25.0%
!!! TGTTGAATGTTTTTTACTTG+AGG - chr8_4:4759231-4759250 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG - chr8_4:4759337-4759356 None:intergenic 25.0%
! GAATATCTTTGATATGGTAA+GGG - chr8_4:4759554-4759573 None:intergenic 25.0%
! CATAAACACTTTCAATGATT+TGG + chr8_4:4759662-4759681 Msa1308480:CDS 25.0%
! ATTAGACTCATTTCTGTTAA+GGG - chr8_4:4759748-4759767 None:intergenic 25.0%
! AATTAGACTCATTTCTGTTA+AGG - chr8_4:4759749-4759768 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG + chr8_4:4759781-4759800 Msa1308480:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG + chr8_4:4759825-4759844 Msa1308480:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG + chr8_4:4759826-4759845 Msa1308480:CDS 25.0%
ATGTGACAATGAATTCATTG+TGG - chr8_4:4759122-4759141 None:intergenic 30.0%
AGAAGAATGAAGTCTATGTT+TGG - chr8_4:4759207-4759226 None:intergenic 30.0%
! TTGACTTCTTGTTGTAGAAA+TGG - chr8_4:4759303-4759322 None:intergenic 30.0%
GGAATATCTTTGATATGGTA+AGG - chr8_4:4759555-4759574 None:intergenic 30.0%
GATCAGGAATATCTTTGATA+TGG - chr8_4:4759560-4759579 None:intergenic 30.0%
CAGAAATTCTCATTAGTTGA+TGG + chr8_4:4759633-4759652 Msa1308480:CDS 30.0%
!!! AAACCTTGTTTTTATCCAGT+GGG + chr8_4:4759720-4759739 Msa1308480:CDS 30.0%
TTAGACTCATTTCTGTTAAG+GGG - chr8_4:4759747-4759766 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG - chr8_4:4759822-4759841 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG + chr8_4:4759951-4759970 Msa1308480:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG - chr8_4:4759990-4760009 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG + chr8_4:4759995-4760014 Msa1308480:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG - chr8_4:4760005-4760024 None:intergenic 30.0%
TTGGAAAGAAACAGAGAAAA+TGG + chr8_4:4760014-4760033 Msa1308480:CDS 30.0%
AAGAAACAGAGAAAATGGAT+TGG + chr8_4:4760019-4760038 Msa1308480:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG + chr8_4:4760097-4760116 Msa1308480:CDS 30.0%
GGAAATACAAAAGAGAATCA+AGG + chr8_4:4760319-4760338 Msa1308480:CDS 30.0%
TGAAAATGGTTCATCTAAGA+AGG + chr8_4:4760373-4760392 Msa1308480:CDS 30.0%
ATGTGACAATGAATTCATTG+TGG - chr8_4:4759122-4759141 None:intergenic 30.0%
AGAAGAATGAAGTCTATGTT+TGG - chr8_4:4759207-4759226 None:intergenic 30.0%
! TTGACTTCTTGTTGTAGAAA+TGG - chr8_4:4759303-4759322 None:intergenic 30.0%
GGAATATCTTTGATATGGTA+AGG - chr8_4:4759555-4759574 None:intergenic 30.0%
GATCAGGAATATCTTTGATA+TGG - chr8_4:4759560-4759579 None:intergenic 30.0%
CAGAAATTCTCATTAGTTGA+TGG + chr8_4:4759633-4759652 Msa1308480:CDS 30.0%
!!! AAACCTTGTTTTTATCCAGT+GGG + chr8_4:4759720-4759739 Msa1308480:CDS 30.0%
TTAGACTCATTTCTGTTAAG+GGG - chr8_4:4759747-4759766 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG - chr8_4:4759822-4759841 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG + chr8_4:4759951-4759970 Msa1308480:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG - chr8_4:4759990-4760009 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG + chr8_4:4759995-4760014 Msa1308480:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG - chr8_4:4760005-4760024 None:intergenic 30.0%
TTGGAAAGAAACAGAGAAAA+TGG + chr8_4:4760014-4760033 Msa1308480:CDS 30.0%
AAGAAACAGAGAAAATGGAT+TGG + chr8_4:4760019-4760038 Msa1308480:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG + chr8_4:4760097-4760116 Msa1308480:CDS 30.0%
GGAAATACAAAAGAGAATCA+AGG + chr8_4:4760319-4760338 Msa1308480:CDS 30.0%
TGAAAATGGTTCATCTAAGA+AGG + chr8_4:4760373-4760392 Msa1308480:CDS 30.0%
AATTAAATGGCTAAGTCCAG+GGG - chr8_4:4759064-4759083 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG - chr8_4:4759065-4759084 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG - chr8_4:4759087-4759106 None:intergenic 35.0%
GTGGCTATGAAGTAATTGTT+TGG - chr8_4:4759103-4759122 None:intergenic 35.0%
ACATTCATCATTCCAACACT+TGG + chr8_4:4759138-4759157 Msa1308480:CDS 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG - chr8_4:4759174-4759193 None:intergenic 35.0%
AGAATGAAGTCTATGTTTGG+TGG - chr8_4:4759204-4759223 None:intergenic 35.0%
! TCTTATCTTTTCTATGCCTC+AGG + chr8_4:4759414-4759433 Msa1308480:CDS 35.0%
GAAATAGAGTCGTTGAGAAT+CGG - chr8_4:4759471-4759490 None:intergenic 35.0%
TATGAAACTGTGAATGTTCC+AGG + chr8_4:4759519-4759538 Msa1308480:CDS 35.0%
CTTGATCTTTCACATAGAAG+TGG - chr8_4:4759582-4759601 None:intergenic 35.0%
! TTTCAATGATTTGGAACCTG+AGG + chr8_4:4759671-4759690 Msa1308480:CDS 35.0%
! ATTTGGAACCTGAGGTTATA+AGG + chr8_4:4759679-4759698 Msa1308480:CDS 35.0%
!!! GAAACCTTGTTTTTATCCAG+TGG + chr8_4:4759719-4759738 Msa1308480:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG + chr8_4:4759785-4759804 Msa1308480:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG - chr8_4:4759819-4759838 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG + chr8_4:4759831-4759850 Msa1308480:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG + chr8_4:4759888-4759907 Msa1308480:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG + chr8_4:4759987-4760006 Msa1308480:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG + chr8_4:4760071-4760090 Msa1308480:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG + chr8_4:4760096-4760115 Msa1308480:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG + chr8_4:4760098-4760117 Msa1308480:CDS 35.0%
ATCCTTTGTTCTGCAAATAG+AGG - chr8_4:4760170-4760189 None:intergenic 35.0%
ATTATTGACAGATGAGCTCA+AGG + chr8_4:4760199-4760218 Msa1308480:CDS 35.0%
CCACTTTCATCATCAATCTT+CGG - chr8_4:4760236-4760255 None:intergenic 35.0%
!! CGAAGATTGATGATGAAAGT+GGG + chr8_4:4760234-4760253 Msa1308480:CDS 35.0%
AAGAAGTTGCTAACTGTGTA+AGG + chr8_4:4760270-4760289 Msa1308480:CDS 35.0%
TAACTGTGTAAGGAGAATCA+TGG + chr8_4:4760280-4760299 Msa1308480:CDS 35.0%
AGAATCAAGGAATTGAGTGT+TGG + chr8_4:4760332-4760351 Msa1308480:CDS 35.0%
AATTAAATGGCTAAGTCCAG+GGG - chr8_4:4759064-4759083 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG - chr8_4:4759065-4759084 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG - chr8_4:4759087-4759106 None:intergenic 35.0%
GTGGCTATGAAGTAATTGTT+TGG - chr8_4:4759103-4759122 None:intergenic 35.0%
ACATTCATCATTCCAACACT+TGG + chr8_4:4759138-4759157 Msa1308480:CDS 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG - chr8_4:4759174-4759193 None:intergenic 35.0%
AGAATGAAGTCTATGTTTGG+TGG - chr8_4:4759204-4759223 None:intergenic 35.0%
! TCTTATCTTTTCTATGCCTC+AGG + chr8_4:4759414-4759433 Msa1308480:CDS 35.0%
GAAATAGAGTCGTTGAGAAT+CGG - chr8_4:4759471-4759490 None:intergenic 35.0%
TATGAAACTGTGAATGTTCC+AGG + chr8_4:4759519-4759538 Msa1308480:CDS 35.0%
CTTGATCTTTCACATAGAAG+TGG - chr8_4:4759582-4759601 None:intergenic 35.0%
! TTTCAATGATTTGGAACCTG+AGG + chr8_4:4759671-4759690 Msa1308480:CDS 35.0%
! ATTTGGAACCTGAGGTTATA+AGG + chr8_4:4759679-4759698 Msa1308480:CDS 35.0%
!!! GAAACCTTGTTTTTATCCAG+TGG + chr8_4:4759719-4759738 Msa1308480:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG + chr8_4:4759785-4759804 Msa1308480:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG - chr8_4:4759819-4759838 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG + chr8_4:4759831-4759850 Msa1308480:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG + chr8_4:4759888-4759907 Msa1308480:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG + chr8_4:4759987-4760006 Msa1308480:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG + chr8_4:4760071-4760090 Msa1308480:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG + chr8_4:4760096-4760115 Msa1308480:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG + chr8_4:4760098-4760117 Msa1308480:CDS 35.0%
ATCCTTTGTTCTGCAAATAG+AGG - chr8_4:4760170-4760189 None:intergenic 35.0%
ATTATTGACAGATGAGCTCA+AGG + chr8_4:4760199-4760218 Msa1308480:CDS 35.0%
CCACTTTCATCATCAATCTT+CGG - chr8_4:4760236-4760255 None:intergenic 35.0%
!! CGAAGATTGATGATGAAAGT+GGG + chr8_4:4760234-4760253 Msa1308480:CDS 35.0%
AAGAAGTTGCTAACTGTGTA+AGG + chr8_4:4760270-4760289 Msa1308480:CDS 35.0%
TAACTGTGTAAGGAGAATCA+TGG + chr8_4:4760280-4760299 Msa1308480:CDS 35.0%
AGAATCAAGGAATTGAGTGT+TGG + chr8_4:4760332-4760351 Msa1308480:CDS 35.0%
GAAGGAACCATAGCAATACA+TGG - chr8_4:4759042-4759061 None:intergenic 40.0%
GGAATTAAATGGCTAAGTCC+AGG - chr8_4:4759066-4759085 None:intergenic 40.0%
TGTTGCATTGAAGGAGTAAG+AGG - chr8_4:4759165-4759184 None:intergenic 40.0%
ATGAGTTTCATTTGTGCTGC+TGG - chr8_4:4759264-4759283 None:intergenic 40.0%
AGAGTGAGACAAAACGATGT+TGG - chr8_4:4759447-4759466 None:intergenic 40.0%
TCTCAACGACTCTATTTCCT+CGG + chr8_4:4759473-4759492 Msa1308480:CDS 40.0%
! CTCTAAGAACTCTATTTCCG+AGG - chr8_4:4759493-4759512 None:intergenic 40.0%
CTTTCACATAGAAGTGGATC+AGG - chr8_4:4759576-4759595 None:intergenic 40.0%
! TGAAGAAGCCTTATAACCTC+AGG - chr8_4:4759690-4759709 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG + chr8_4:4759834-4759853 Msa1308480:CDS 40.0%
CAACTCGATGAGTTAGCATT+TGG + chr8_4:4759873-4759892 Msa1308480:CDS 40.0%
TGAGTGGCAAGAAATTCTTG+TGG + chr8_4:4759904-4759923 Msa1308480:CDS 40.0%
GAGTGGCAAGAAATTCTTGT+GGG + chr8_4:4759905-4759924 Msa1308480:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG - chr8_4:4759942-4759961 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG + chr8_4:4760033-4760052 Msa1308480:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG + chr8_4:4760034-4760053 Msa1308480:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG - chr8_4:4760062-4760081 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG + chr8_4:4760062-4760081 Msa1308480:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG + chr8_4:4760092-4760111 Msa1308480:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG + chr8_4:4760125-4760144 Msa1308480:CDS 40.0%
!! CCGAAGATTGATGATGAAAG+TGG + chr8_4:4760233-4760252 Msa1308480:CDS 40.0%
TGTGTAAGGAGAATCATGGA+AGG + chr8_4:4760284-4760303 Msa1308480:CDS 40.0%
GCTGTTGCAACAAGTGAAAA+TGG + chr8_4:4760359-4760378 Msa1308480:CDS 40.0%
ATGCAATCTCGATGCTAAAG+AGG - chr8_4:4760405-4760424 None:intergenic 40.0%
GAAGGAACCATAGCAATACA+TGG - chr8_4:4759042-4759061 None:intergenic 40.0%
GGAATTAAATGGCTAAGTCC+AGG - chr8_4:4759066-4759085 None:intergenic 40.0%
TGTTGCATTGAAGGAGTAAG+AGG - chr8_4:4759165-4759184 None:intergenic 40.0%
ATGAGTTTCATTTGTGCTGC+TGG - chr8_4:4759264-4759283 None:intergenic 40.0%
AGAGTGAGACAAAACGATGT+TGG - chr8_4:4759447-4759466 None:intergenic 40.0%
TCTCAACGACTCTATTTCCT+CGG + chr8_4:4759473-4759492 Msa1308480:CDS 40.0%
! CTCTAAGAACTCTATTTCCG+AGG - chr8_4:4759493-4759512 None:intergenic 40.0%
CTTTCACATAGAAGTGGATC+AGG - chr8_4:4759576-4759595 None:intergenic 40.0%
! TGAAGAAGCCTTATAACCTC+AGG - chr8_4:4759690-4759709 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG + chr8_4:4759834-4759853 Msa1308480:CDS 40.0%
CAACTCGATGAGTTAGCATT+TGG + chr8_4:4759873-4759892 Msa1308480:CDS 40.0%
TGAGTGGCAAGAAATTCTTG+TGG + chr8_4:4759904-4759923 Msa1308480:CDS 40.0%
GAGTGGCAAGAAATTCTTGT+GGG + chr8_4:4759905-4759924 Msa1308480:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG - chr8_4:4759942-4759961 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG + chr8_4:4760033-4760052 Msa1308480:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG + chr8_4:4760034-4760053 Msa1308480:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG - chr8_4:4760062-4760081 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG + chr8_4:4760062-4760081 Msa1308480:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG + chr8_4:4760092-4760111 Msa1308480:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG + chr8_4:4760125-4760144 Msa1308480:CDS 40.0%
!! CCGAAGATTGATGATGAAAG+TGG + chr8_4:4760233-4760252 Msa1308480:CDS 40.0%
TGTGTAAGGAGAATCATGGA+AGG + chr8_4:4760284-4760303 Msa1308480:CDS 40.0%
GCTGTTGCAACAAGTGAAAA+TGG + chr8_4:4760359-4760378 Msa1308480:CDS 40.0%
ATGCAATCTCGATGCTAAAG+AGG - chr8_4:4760405-4760424 None:intergenic 40.0%
! TCATTTGTGCTGCTGGATCA+TGG - chr8_4:4759257-4759276 None:intergenic 45.0%
TGGTAAGGGACTATACTACC+TGG - chr8_4:4759540-4759559 None:intergenic 45.0%
GGTCCCACTGGATAAAAACA+AGG - chr8_4:4759726-4759745 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG + chr8_4:4760056-4760075 Msa1308480:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG + chr8_4:4760074-4760093 Msa1308480:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG + chr8_4:4760109-4760128 Msa1308480:CDS 45.0%
ATGGTGTTCCTATGATTGCG+TGG + chr8_4:4760144-4760163 Msa1308480:CDS 45.0%
AATAGAGGCCACGCAATCAT+AGG - chr8_4:4760155-4760174 None:intergenic 45.0%
GGCCTCTATTTGCAGAACAA+AGG + chr8_4:4760165-4760184 Msa1308480:CDS 45.0%
ATTGACAGATGAGCTCAAGG+TGG + chr8_4:4760202-4760221 Msa1308480:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG + chr8_4:4760298-4760317 Msa1308480:CDS 45.0%
! TCATTTGTGCTGCTGGATCA+TGG - chr8_4:4759257-4759276 None:intergenic 45.0%
TGGTAAGGGACTATACTACC+TGG - chr8_4:4759540-4759559 None:intergenic 45.0%
GGTCCCACTGGATAAAAACA+AGG - chr8_4:4759726-4759745 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG + chr8_4:4760056-4760075 Msa1308480:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG + chr8_4:4760074-4760093 Msa1308480:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG + chr8_4:4760109-4760128 Msa1308480:CDS 45.0%
ATGGTGTTCCTATGATTGCG+TGG + chr8_4:4760144-4760163 Msa1308480:CDS 45.0%
AATAGAGGCCACGCAATCAT+AGG - chr8_4:4760155-4760174 None:intergenic 45.0%
GGCCTCTATTTGCAGAACAA+AGG + chr8_4:4760165-4760184 Msa1308480:CDS 45.0%
ATTGACAGATGAGCTCAAGG+TGG + chr8_4:4760202-4760221 Msa1308480:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG + chr8_4:4760298-4760317 Msa1308480:CDS 45.0%
ATTGCTATGGTTCCTTCCCC+TGG + chr8_4:4759045-4759064 Msa1308480:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG - chr8_4:4759060-4759079 None:intergenic 50.0%
GGAGTAAGAGGACCAAGTGT+TGG - chr8_4:4759153-4759172 None:intergenic 50.0%
TTTCTGTTAAGGGGTCCCAC+TGG - chr8_4:4759738-4759757 None:intergenic 50.0%
TCAACTTGTGGTGCCCATGA+TGG - chr8_4:4760050-4760069 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG + chr8_4:4760118-4760137 Msa1308480:CDS 50.0%
ATTGCTATGGTTCCTTCCCC+TGG + chr8_4:4759045-4759064 Msa1308480:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG - chr8_4:4759060-4759079 None:intergenic 50.0%
GGAGTAAGAGGACCAAGTGT+TGG - chr8_4:4759153-4759172 None:intergenic 50.0%
TTTCTGTTAAGGGGTCCCAC+TGG - chr8_4:4759738-4759757 None:intergenic 50.0%
TCAACTTGTGGTGCCCATGA+TGG - chr8_4:4760050-4760069 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG + chr8_4:4760118-4760137 Msa1308480:CDS 50.0%
CGATGTTGGAACAGCTCCTG+AGG - chr8_4:4759433-4759452 None:intergenic 55.0%
ATGAGCTCAAGGTGGCTGTG+AGG + chr8_4:4760210-4760229 Msa1308480:CDS 55.0%
CGATGTTGGAACAGCTCCTG+AGG - chr8_4:4759433-4759452 None:intergenic 55.0%
ATGAGCTCAAGGTGGCTGTG+AGG + chr8_4:4760210-4760229 Msa1308480:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 4759018 4760433 4759018 ID=Msa1308480;Name=Msa1308480
chr8_4 mRNA 4759018 4760433 4759018 ID=Msa1308480-mRNA-1;Parent=Msa1308480;Name=Msa1308480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|471
chr8_4 exon 4759018 4760433 4759018 ID=Msa1308480-mRNA-1:exon:1421;Parent=Msa1308480-mRNA-1
chr8_4 CDS 4759018 4760433 4759018 ID=Msa1308480-mRNA-1:cds;Parent=Msa1308480-mRNA-1
Gene Sequence

>Msa1308480

ATGCACATGATGAATAAAAAACCATGTATTGCTATGGTTCCTTCCCCTGGACTTAGCCATTTAATTCCACAAGTTGAATTTGCCAAACAATTACTTCATAGCCACAATGAATTCATTGTCACATTCATCATTCCAACACTTGGTCCTCTTACTCCTTCAATGCAACAAGTCTTGAACAATCTTCCACCAAACATAGACTTCATTCTTCTTCCTCAAGTAAAAAACATTCAACAAAGCCATGATCCAGCAGCACAAATGAAACTCATTGTCAAACATTCTATTCCATTTCTACAACAAGAAGTCAAATCACTCATTTCCAAAACTAACCTTGTTTCTTTAATCTTTAGTATATTTTCAACAGATGCATATGAAGTTGCTAAACAGTTCAACTTGTCTTCTTATCTTTTCTATGCCTCAGGAGCTGTTCCAACATCGTTTTGTCTCACTCTTCCGATTCTCAACGACTCTATTTCCTCGGAAATAGAGTTCTTAGAGTCAGCTTATGAAACTGTGAATGTTCCAGGTAGTATAGTCCCTTACCATATCAAAGATATTCCTGATCCACTTCTATGTGAAAGATCAAGTTTAGAGTACAAATCATTTCTTGATGTATGTCAGAAATTCTCATTAGTTGATGGTCTTATCATAAACACTTTCAATGATTTGGAACCTGAGGTTATAAGGCTTCTTCAAGAAAAAAAGAAACCTTGTTTTTATCCAGTGGGACCCCTTAACAGAAATGAGTCTAATTGTGAAGATAACATTAATTCAATGTGTTTAAGGTGGTTGGAAAATCAACCACCAAGTTCTGTTCTTTATGTATGTTTTGGGAGTGGTGGAACTGTTTCTCATGAACAACTCGATGAGTTAGCATTTGGATTAGAATTGAGTGGCAAGAAATTCTTGTGGGTTGTGAGAGTTCCAAGTAAAGCTGTTAACTCTGCTTATTTTGTTGGAGCAAAAGATGATCCGTTAGAGTATTTACCAAATGGTTTCTTGGAAAGAAACAGAGAAAATGGATTGGTTGTTCCATCATGGGCACCACAAGTTGAGATTCTTGGTCATGGTTCAATTGGTGGTTTTTTGAGTCATTGTGGTTGGGGTTCAACTTTGGAGAGTGTGGTTAATGGTGTTCCTATGATTGCGTGGCCTCTATTTGCAGAACAAAGGATGAATGCAAAATTATTGACAGATGAGCTCAAGGTGGCTGTGAGGCCGAAGATTGATGATGAAAGTGGGATAGTGAAAAGAGAAGAAGTTGCTAACTGTGTAAGGAGAATCATGGAAGGTGATGAAAGCTTGGAAATACAAAAGAGAATCAAGGAATTGAGTGTTGGTGCTGCTGTTGCAACAAGTGAAAATGGTTCATCTAAGAAGGCGCTCTCCTCTTTAGCATCGAGATTGCATAACTTTTGA

Protein sequence

>Msa1308480

MHMMNKKPCIAMVPSPGLSHLIPQVEFAKQLLHSHNEFIVTFIIPTLGPLTPSMQQVLNNLPPNIDFILLPQVKNIQQSHDPAAQMKLIVKHSIPFLQQEVKSLISKTNLVSLIFSIFSTDAYEVAKQFNLSSYLFYASGAVPTSFCLTLPILNDSISSEIEFLESAYETVNVPGSIVPYHIKDIPDPLLCERSSLEYKSFLDVCQKFSLVDGLIINTFNDLEPEVIRLLQEKKKPCFYPVGPLNRNESNCEDNINSMCLRWLENQPPSSVLYVCFGSGGTVSHEQLDELAFGLELSGKKFLWVVRVPSKAVNSAYFVGAKDDPLEYLPNGFLERNRENGLVVPSWAPQVEILGHGSIGGFLSHCGWGSTLESVVNGVPMIAWPLFAEQRMNAKLLTDELKVAVRPKIDDESGIVKREEVANCVRRIMEGDESLEIQKRIKELSVGAAVATSENGSSKKALSSLASRLHNF*