AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0203640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0203640 MtrunA17_Chr2g0301361 98.997 299 3 0 277 575 190 488 0.0 621
Msa0203640 MtrunA17_Chr2g0301361 96.429 196 7 0 1 196 1 196 3.02e-131 392
Msa0203640 MtrunA17_Chr4g0070171 89.298 299 32 0 277 575 193 491 0.0 573
Msa0203640 MtrunA17_Chr4g0070171 68.687 198 58 1 3 196 2 199 3.32e-77 252
Msa0203640 MtrunA17_Chr1g0204841 63.667 300 107 2 277 575 173 471 1.99e-136 405
Msa0203640 MtrunA17_Chr1g0204841 39.264 163 86 2 33 192 23 175 7.91e-31 125
Msa0203640 MtrunA17_Chr8g0388511 59.608 255 102 1 278 531 131 385 8.76e-109 331
Msa0203640 MtrunA17_Chr8g0388511 44.275 131 73 0 66 196 6 136 1.76e-30 123
Msa0203640 MtrunA17_Chr4g0052121 51.948 308 126 6 277 575 171 465 3.32e-97 304
Msa0203640 MtrunA17_Chr4g0052121 48.438 128 63 1 68 192 46 173 9.60e-31 125
Msa0203640 MtrunA17_Chr1g0183091 47.038 287 148 2 290 572 182 468 4.61e-79 257
Msa0203640 MtrunA17_Chr8g0388561 54.651 172 74 2 403 574 1 168 1.82e-59 195
Msa0203640 MtrunA17_Chr8g0388541 45.604 182 41 2 348 529 1 124 4.92e-44 152
Msa0203640 MtrunA17_Chr8g0388551 48.052 154 77 1 283 436 105 255 6.85e-44 159
Msa0203640 MtrunA17_Chr8g0388551 31.852 135 65 2 37 171 2 109 3.41e-12 67.8
Msa0203640 MtrunA17_Chr8g0388531 44.094 127 71 0 66 192 34 160 3.67e-31 120
Msa0203640 MtrunA17_Chr8g0388531 60.000 55 22 0 289 343 171 225 7.43e-16 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0203640 AT1G74960.1 91.639 299 25 0 277 575 243 541 0.0 565
Msa0203640 AT1G74960.1 51.452 241 65 4 2 191 5 244 7.31e-64 219
Msa0203640 AT1G74960.3 91.639 299 25 0 277 575 243 541 0.0 565
Msa0203640 AT1G74960.3 51.452 241 65 4 2 191 5 244 7.31e-64 219
Msa0203640 AT1G74960.2 91.639 299 25 0 277 575 243 541 0.0 565
Msa0203640 AT1G74960.2 51.452 241 65 4 2 191 5 244 7.31e-64 219
Msa0203640 AT5G46290.1 63.000 300 109 2 277 575 174 472 5.45e-135 402
Msa0203640 AT5G46290.1 37.805 164 100 1 36 199 22 183 1.10e-30 125
Msa0203640 AT5G46290.3 60.127 316 108 3 277 575 174 488 2.67e-132 395
Msa0203640 AT5G46290.3 37.805 164 100 1 36 199 22 183 1.25e-30 125
Msa0203640 AT5G46290.2 64.706 221 77 1 355 575 198 417 1.71e-96 301
Msa0203640 AT5G46290.2 37.805 164 100 1 36 199 22 183 7.25e-31 125
Msa0203640 AT2G04540.1 43.522 301 162 3 280 572 159 459 1.51e-79 258

Find 187 sgRNAs with CRISPR-Local

Find 686 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGTTTACCTCAGGATTT+TGG 0.178284 2_1:-27830259 None:intergenic
ACCATTTGCAACAACAAATA+TGG 0.187806 2_1:+27825836 Msa0203640:CDS
CAGCTTCACCTTTAATTATA+TGG 0.206063 2_1:-27826073 None:intergenic
CTCTGTTTCCAGAGGATTGC+TGG 0.218073 2_1:+27824126 Msa0203640:intron
TTGTTTAATTGCCATATTAA+AGG 0.219710 2_1:+27832108 Msa0203640:three_prime_UTR
ATTCTCATTCATTCTCTTCA+TGG 0.241116 2_1:+27821953 Msa0203640:exon
GTTGCAAATGGTACACAAAA+AGG 0.243023 2_1:-27825825 None:intergenic
GCTGCAAACCATATAATTAA+AGG 0.245748 2_1:+27826065 Msa0203640:CDS
GAAAAGGCATTAGCTAATTC+TGG 0.253001 2_1:+27830140 Msa0203640:CDS
GATTGGGAGAAGAGAGATTA+AGG 0.255347 2_1:-27822091 None:intergenic
CAGGCTTTGATTCATTGTTT+TGG 0.269010 2_1:+27830236 Msa0203640:CDS
TCAAATGTTGACCACTAAAA+AGG 0.282279 2_1:-27832399 None:intergenic
TTGTCTAATTCATTTGGTTT+TGG 0.284201 2_1:+27831346 Msa0203640:CDS
TGTGTTATGGATTGCTTACT+TGG 0.292385 2_1:+27831887 Msa0203640:three_prime_UTR
ACCGAGGAACTCTGCATATA+TGG 0.296883 2_1:-27827220 None:intergenic
GAAAGAGAGACTGGACATTA+AGG 0.307184 2_1:+27831318 Msa0203640:CDS
GGGACAACTCATCAGTGTTT+TGG 0.334568 2_1:-27831924 None:intergenic
GCTGTGGATATTGAATAGTT+TGG 0.338257 2_1:-27826011 None:intergenic
TGCCATGCTTGCAATGGATC+TGG 0.338895 2_1:+27825863 Msa0203640:CDS
GGCAACGATCCTTGCTGAAA+TGG 0.346658 2_1:+27825257 Msa0203640:CDS
TAAAGTAATGGCTGTAGCTT+TGG 0.350403 2_1:+27823853 Msa0203640:CDS
TTTGTTGTACTTCTACTTAG+TGG 0.351516 2_1:+27832323 Msa0203640:three_prime_UTR
CAGATTATATTAAAATAATC+TGG 0.352093 2_1:-27832265 None:intergenic
AATGAAGGAGAAAGGTTAAG+AGG 0.360333 2_1:-27821907 None:intergenic
CCCATATTTGTTGTTGCAAA+TGG 0.365943 2_1:-27825837 None:intergenic
TACCTGCATTCCACCCATTC+CGG 0.366985 2_1:-27824322 None:intergenic
GTGAGAGAAGAGAAGAGAAC+TGG 0.368049 2_1:-27821828 None:intergenic
AGTGGGATAAGCGAGATTAA+TGG 0.369472 2_1:+27824010 Msa0203640:CDS
GCAGGCTTGTCTAATTCATT+TGG 0.370179 2_1:+27831340 Msa0203640:CDS
CAGAGATTGTTTGATGCTCC+TGG 0.374733 2_1:+27831964 Msa0203640:three_prime_UTR
TTTGTCATGGGTGAAGGGGC+TGG 0.378015 2_1:+27826865 Msa0203640:CDS
AAAATCTGCTTCACTTAAAA+GGG 0.378592 2_1:-27831396 None:intergenic
TGGGTGGCTTTGTAGCATGC+AGG 0.380536 2_1:+27826362 Msa0203640:CDS
CTGTGGATATTGAATAGTTT+GGG 0.381332 2_1:-27826010 None:intergenic
ACTACTCGTCTTTGCTCTAT+AGG 0.387655 2_1:-27823911 None:intergenic
CACTCGTTGGGCCAACCGTT+TGG 0.390390 2_1:+27825236 Msa0203640:CDS
CACACCTGCTGGAGATCTTA+AGG 0.393542 2_1:+27830208 Msa0203640:CDS
GGACGATGAATCATTATAGT+AGG 0.393917 2_1:+27832031 Msa0203640:three_prime_UTR
TCCATCCTCTTTGAAAACTT+TGG 0.397379 2_1:-27824186 None:intergenic
TACTAAAGCTTCACGCCCTT+GGG 0.399669 2_1:+27826411 Msa0203640:CDS
TTGAAAATTGTAGGGGTGGA+TGG 0.404082 2_1:+27825986 Msa0203640:intron
CCCAATCGAATGTCCCGTTC+TGG 0.406670 2_1:+27822107 Msa0203640:CDS
GAGTGAAAACGCCTGTGTTA+TGG 0.412495 2_1:+27831874 Msa0203640:three_prime_UTR
CCATTTGCAACAACAAATAT+GGG 0.422822 2_1:+27825837 Msa0203640:CDS
TTCTACAATAATCTACTTGA+TGG 0.427157 2_1:+27823983 Msa0203640:CDS
GCAACGATCCTTGCTGAAAT+GGG 0.428756 2_1:+27825258 Msa0203640:CDS
TATCATACCACTGCTTCATC+CGG 0.430956 2_1:-27830600 None:intergenic
CAGGAGCATCAAACAATCTC+TGG 0.433513 2_1:-27831963 None:intergenic
TCTGTTTCCAGAGGATTGCT+GGG 0.438070 2_1:+27824127 Msa0203640:intron
GATGGATTTGTCATGGGTGA+AGG 0.438227 2_1:+27826859 Msa0203640:CDS
ATCGTTCTCGTCGTCGCAGC+AGG 0.440595 2_1:+27822060 Msa0203640:CDS
AGATTATTGTAGAAGACATC+TGG 0.441095 2_1:-27823974 None:intergenic
TGTTATTCTTTGCATTGAAA+AGG 0.442258 2_1:+27830124 Msa0203640:CDS
AAGTGTGAAATTACCAGAAC+GGG 0.446164 2_1:-27822120 None:intergenic
CGAGTAGTTGTGACGGGTAT+GGG 0.449622 2_1:+27823926 Msa0203640:CDS
TTGCACACCTCCAGCAGTCC+TGG 0.449636 2_1:-27825170 None:intergenic
AATCTTGGTGTAGGCTTGGG+TGG 0.449843 2_1:+27826346 Msa0203640:intron
ACGAGTAGTTGTGACGGGTA+TGG 0.463031 2_1:+27823925 Msa0203640:CDS
AATCTACTTGATGGTGTTAG+TGG 0.463552 2_1:+27823992 Msa0203640:CDS
CTACTAAAGCTTCACGCCCT+TGG 0.463863 2_1:+27826410 Msa0203640:CDS
ATCATTATTTCTTTGTGAGA+GGG 0.464240 2_1:-27826386 None:intergenic
AATACCTTGTTAATGATGAT+AGG 0.464574 2_1:-27831437 None:intergenic
TTACACAATCAATCACTTGA+TGG 0.464759 2_1:+27832074 Msa0203640:three_prime_UTR
TGAAAATTGTAGGGGTGGAT+GGG 0.466104 2_1:+27825987 Msa0203640:intron
TTGCAGGACGTGATGCTTTG+TGG 0.471500 2_1:+27826223 Msa0203640:intron
GGGTGGCTTTGTAGCATGCA+GGG 0.471985 2_1:+27826363 Msa0203640:CDS
AAAGAAAGAATGAAGGAGAA+AGG 0.475352 2_1:-27821915 None:intergenic
CCTCGGTAGGTTTCAAATGT+TGG 0.475538 2_1:-27832346 None:intergenic
GGAAGCCGTTGCAACTATAC+AGG 0.479199 2_1:+27830432 Msa0203640:CDS
ACCAGAACGGGACATTCGAT+TGG 0.480965 2_1:-27822108 None:intergenic
ATGTTGTATCTGCTGACAGC+TGG 0.481211 2_1:+27824216 Msa0203640:CDS
AGAGATGAAAGAAAGAATGA+AGG 0.482672 2_1:-27821922 None:intergenic
AGCTAATTCTGGAGTTTCAA+AGG 0.485283 2_1:+27830151 Msa0203640:CDS
ATCAAATCTTTCTCAACTGA+TGG 0.487001 2_1:+27824153 Msa0203640:CDS
CTTGCAGTTGCTGACTAACC+AGG 0.487374 2_1:+27831811 Msa0203640:intron
CTCCGGAATGGGTGGAATGC+AGG 0.488440 2_1:+27824320 Msa0203640:CDS
CAAGGGCGTGAAGCTTTAGT+AGG 0.491204 2_1:-27826409 None:intergenic
TGCAAATGCTACACATTGCC+TGG 0.493290 2_1:-27831829 None:intergenic
CATGCCACATCCACACCTGC+TGG 0.494143 2_1:+27830197 Msa0203640:CDS
GATGCTGCTATAATACCAAT+TGG 0.497951 2_1:+27826253 Msa0203640:CDS
GGTGTGCAACGTGGTCGAAC+TGG 0.499796 2_1:+27825184 Msa0203640:CDS
TGAGATTCGTAAAGCTTCAA+TGG 0.501049 2_1:-27825787 None:intergenic
CAGGACACCAATGTGCTTGT+GGG 0.506351 2_1:+27831289 Msa0203640:intron
AACCAGATCCATTGCAAGCA+TGG 0.507024 2_1:-27825865 None:intergenic
CAGCAAGGATCGTTGCCAAA+CGG 0.508464 2_1:-27825251 None:intergenic
TACACAATCAATCACTTGAT+GGG 0.509298 2_1:+27832075 Msa0203640:three_prime_UTR
ATGGATTTGTCATGGGTGAA+GGG 0.509986 2_1:+27826860 Msa0203640:CDS
AGTGATACAGCCAGGACTGC+TGG 0.511205 2_1:+27825160 Msa0203640:CDS
ATCTCCAGCAGGTGTGGATG+TGG 0.511310 2_1:-27830201 None:intergenic
TCTATGATTGGTCATCTACT+AGG 0.512790 2_1:+27830394 Msa0203640:CDS
GCAAATACAAACGCTGTCGT+AGG 0.517127 2_1:-27825304 None:intergenic
TTCATTGAAATTTATGCCTG+AGG 0.517681 2_1:+27832192 Msa0203640:three_prime_UTR
CAAATACAAACGCTGTCGTA+GGG 0.519604 2_1:-27825303 None:intergenic
CCTTCCTATCATCATTAACA+AGG 0.520305 2_1:+27831433 Msa0203640:three_prime_UTR
CCAGAACGGGACATTCGATT+GGG 0.522885 2_1:-27822107 None:intergenic
ACTGCACAGAAGCATGGTTG+TGG 0.523994 2_1:-27825140 None:intergenic
ATGGGTGTGGTCACACCACT+TGG 0.525435 2_1:+27823944 Msa0203640:CDS
CTTTGATCCCACAAGCACAT+TGG 0.525820 2_1:-27831296 None:intergenic
CCAGGACACCAATGTGCTTG+TGG 0.525865 2_1:+27831288 Msa0203640:intron
TACGATCTATGAGCCAGCTC+AGG 0.527424 2_1:-27825105 None:intergenic
GATCATTATTTCTTTGTGAG+AGG 0.527650 2_1:-27826387 None:intergenic
AGAAGAGTTAGAGCATGCTA+AGG 0.527971 2_1:+27826900 Msa0203640:CDS
ATCATACCACTGCTTCATCC+GGG 0.529315 2_1:-27830599 None:intergenic
AATTCGACGAAGTCTATGAT+TGG 0.531883 2_1:+27830382 Msa0203640:CDS
GGGATCAAAGAAAGAGAGAC+TGG 0.532804 2_1:+27831309 Msa0203640:CDS
AAAAGGCTAGAACTATATAG+AGG 0.534978 2_1:-27832382 None:intergenic
CAAACGCTGTCGTAGGGAAG+AGG 0.535143 2_1:-27825297 None:intergenic
GGTCATCTACTAGGAGCAGC+TGG 0.536898 2_1:+27830403 Msa0203640:CDS
AAAATTTCAAGGTAAAGTAA+TGG 0.539854 2_1:+27823841 Msa0203640:intron
CTTAAATTGAAATCAACCTC+AGG 0.541980 2_1:-27832208 None:intergenic
TGGAGATCTTAAGGAGTACC+AGG 0.543599 2_1:+27830217 Msa0203640:CDS
GAAAACGGAGTCGCTGTTGG+TGG 0.543835 2_1:-27825331 None:intergenic
GGGATTGTAGATCACTCGTT+GGG 0.545291 2_1:+27825224 Msa0203640:CDS
CTTAAGATCTCCAGCAGGTG+TGG 0.546013 2_1:-27830207 None:intergenic
CACAATATTACAATATCCCA+AGG 0.546631 2_1:-27826427 None:intergenic
TTCTGTGCAGTGATACAGCC+AGG 0.546947 2_1:+27825152 Msa0203640:CDS
TTCATGTAGGCAATAAAGAC+AGG 0.551376 2_1:+27830546 Msa0203640:intron
TGTAGGCAATAAAGACAGGA+TGG 0.553890 2_1:+27830550 Msa0203640:intron
ACTCGTCTTTGCTCTATAGG+AGG 0.556147 2_1:-27823908 None:intergenic
ACCATATATGCAGAGTTCCT+CGG 0.556868 2_1:+27827219 Msa0203640:CDS
GAACTGGCGTCGTGAGTTTG+AGG 0.557218 2_1:+27825200 Msa0203640:CDS
TGGATTTGTCATGGGTGAAG+GGG 0.557280 2_1:+27826861 Msa0203640:CDS
CTGGCGTCGTGAGTTTGAGG+TGG 0.560114 2_1:+27825203 Msa0203640:CDS
CCTACGTAGGATCTTGAAAA+CGG 0.560863 2_1:-27825346 None:intergenic
CTTGAAAACGGAGTCGCTGT+TGG 0.561133 2_1:-27825334 None:intergenic
AAGGATCGTTGCCAAACGGT+TGG 0.564276 2_1:-27825247 None:intergenic
TGGCGTCGTGAGTTTGAGGT+GGG 0.564482 2_1:+27825204 Msa0203640:CDS
AGTTGTGACGGGTATGGGTG+TGG 0.566633 2_1:+27823931 Msa0203640:CDS
CCTTGTTAATGATGATAGGA+AGG 0.567694 2_1:-27831433 None:intergenic
CAAAACAATGAATCAAAGCC+TGG 0.569940 2_1:-27830235 None:intergenic
TGTCGTAGGGAAGAGGAAGA+AGG 0.571958 2_1:-27825290 None:intergenic
TGGAATTACTGAAGAAGTAA+TGG 0.572336 2_1:+27824260 Msa0203640:CDS
TGGGATTGTAGATCACTCGT+TGG 0.572472 2_1:+27825223 Msa0203640:CDS
CTGTTTCCAGAGGATTGCTG+GGG 0.573853 2_1:+27824128 Msa0203640:intron
ATCTACTTGATGGTGTTAGT+GGG 0.577119 2_1:+27823993 Msa0203640:CDS
CCATATTAAAGGAGAAAATG+TGG 0.577476 2_1:+27832119 Msa0203640:three_prime_UTR
ATGAAGAGAATGAATGAGAA+TGG 0.581140 2_1:-27821951 None:intergenic
TGAGAGAAGAGAAGAGAACT+GGG 0.582268 2_1:-27821827 None:intergenic
CTGTAGCCTAGATCCTGAGC+TGG 0.582484 2_1:+27825092 Msa0203640:intron
GAGAGACTGGACATTAAGGC+AGG 0.582501 2_1:+27831322 Msa0203640:CDS
CAAAGACGAGTAGTTGTGAC+GGG 0.584893 2_1:+27823920 Msa0203640:CDS
GGGTTCTGCCATGCTTGCAA+TGG 0.587872 2_1:+27825857 Msa0203640:CDS
TAATATCAATCTAGAAAACC+CGG 0.589028 2_1:+27830581 Msa0203640:CDS
GAGTTAGATAAAACAAAATG+TGG 0.592751 2_1:+27824285 Msa0203640:CDS
ACTAGGAGCAGCTGGTGGTG+TGG 0.593602 2_1:+27830411 Msa0203640:CDS
TCAATCACTTGATGGGGACA+TGG 0.598037 2_1:+27832082 Msa0203640:three_prime_UTR
GAACCGTGATGGATTTGTCA+TGG 0.599966 2_1:+27826852 Msa0203640:intron
AAACTCAATTCTATCTCACC+AGG 0.607046 2_1:-27831982 None:intergenic
TACTCCTTAAGATCTCCAGC+AGG 0.608811 2_1:-27830212 None:intergenic
TGGGAGAAGAGAGATTAAGG+TGG 0.610292 2_1:-27822088 None:intergenic
CTGGAAGTTCTGAATCTAGA+GGG 0.611376 2_1:-27831944 None:intergenic
TGTCACCTGTATAGTTGCAA+CGG 0.612124 2_1:-27830437 None:intergenic
CAGGACGTGATGCTTTGTGG+TGG 0.615515 2_1:+27826226 Msa0203640:intron
GAAGTGTGAAATTACCAGAA+CGG 0.615575 2_1:-27822121 None:intergenic
TGATTGTGCACAATATCCAA+CGG 0.615962 2_1:+27824036 Msa0203640:CDS
TTGATTGGCTCCGGAATGGG+TGG 0.619435 2_1:+27824312 Msa0203640:CDS
TTACCTCTCCTCTCTGCACG+TGG 0.620968 2_1:+27821985 Msa0203640:CDS
AAATCTGCTTCACTTAAAAG+GGG 0.626210 2_1:-27831395 None:intergenic
ATGATAGGAAGGTAAACACT+TGG 0.626919 2_1:-27831422 None:intergenic
AACCGTGATGGATTTGTCAT+GGG 0.630882 2_1:+27826853 Msa0203640:CDS
TCAAGTGATTGATTGTGTAA+CGG 0.631411 2_1:-27832071 None:intergenic
GTGACTGAGCCACGTCCTGA+TGG 0.634308 2_1:+27827270 Msa0203640:CDS
AGAAAACCCGGATGAAGCAG+TGG 0.634880 2_1:+27830593 Msa0203640:CDS
ATTACTTGTAGCACACGCTG+TGG 0.636535 2_1:-27826027 None:intergenic
AGTAATTCCAGCATTGACCA+AGG 0.637726 2_1:-27824247 None:intergenic
GTAGGCAATAAAGACAGGAT+GGG 0.638457 2_1:+27830551 Msa0203640:intron
TCTGGAAGTTCTGAATCTAG+AGG 0.639829 2_1:-27831945 None:intergenic
GCAAAGACGAGTAGTTGTGA+CGG 0.640661 2_1:+27823919 Msa0203640:CDS
GTGATATCACAGAACCGTGA+TGG 0.642777 2_1:+27826841 Msa0203640:intron
ACACAATCAATCACTTGATG+GGG 0.648569 2_1:+27832076 Msa0203640:three_prime_UTR
CATCTACTAGGAGCAGCTGG+TGG 0.649400 2_1:+27830406 Msa0203640:CDS
TGTATCACTGCACAGAAGCA+TGG 0.652357 2_1:-27825146 None:intergenic
CACCCATGACAAATCCATCA+CGG 0.667079 2_1:-27826855 None:intergenic
AAGTAAGCAATCCATAACAC+AGG 0.667944 2_1:-27831885 None:intergenic
ATTATATTAAAATAATCTGG+TGG 0.670157 2_1:-27832262 None:intergenic
AAGCCACGTGCAGAGAGGAG+AGG 0.672286 2_1:-27821988 None:intergenic
GCAACAAGCCACGTGCAGAG+AGG 0.675110 2_1:-27821993 None:intergenic
CTGAAGATATGTGATAGCAG+TGG 0.675660 2_1:+27832285 Msa0203640:three_prime_UTR
TAATTCTGGAGTTTCAAAGG+AGG 0.679769 2_1:+27830154 Msa0203640:CDS
ACAATATTACAATATCCCAA+GGG 0.690949 2_1:-27826426 None:intergenic
ACATCTGGATCATGACCAAG+TGG 0.691170 2_1:-27823959 None:intergenic
GATACAGCCAGGACTGCTGG+AGG 0.696330 2_1:+27825163 Msa0203640:CDS
ATACTCTGCCCATTTCAGCA+AGG 0.699768 2_1:-27825266 None:intergenic
ATATATGCAGAGTTCCTCGG+TGG 0.726227 2_1:+27827222 Msa0203640:CDS
ACTGCTGGAGGTGTGCAACG+TGG 0.731387 2_1:+27825175 Msa0203640:CDS
CCAACATTTGAAACCTACCG+AGG 0.758001 2_1:+27832346 Msa0203640:three_prime_UTR
CACATGTGAAGCTTCCACCG+AGG 0.767036 2_1:-27827236 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAATATAATTGCA+AGG + chr2_1:27822782-27822801 Msa0203640:intron 10.0%
!! AATAAAAAATATAATTGCAA+GGG + chr2_1:27822783-27822802 Msa0203640:intron 10.0%
!! ATTTAAATTTATAGTTTGAT+TGG + chr2_1:27822816-27822835 Msa0203640:intron 10.0%
!!! TTGTTTATATAATTAGATTT+TGG - chr2_1:27826686-27826705 None:intergenic 10.0%
!! ATCTTAAAAACATAAATATT+TGG + chr2_1:27827334-27827353 Msa0203640:intron 10.0%
!!! CATAAAAGTATATTAAAAAA+AGG - chr2_1:27828441-27828460 None:intergenic 10.0%
!!! TGTTTTCATAATTTTATTAA+TGG + chr2_1:27829363-27829382 Msa0203640:intron 10.0%
!! ATGAAAATTGAGTAATTAAT+AGG - chr2_1:27822153-27822172 None:intergenic 15.0%
!! TAATATCAAAAAACTACAAA+AGG - chr2_1:27824100-27824119 None:intergenic 15.0%
!! TGATATGTTTATGTATAAAT+AGG - chr2_1:27824846-27824865 None:intergenic 15.0%
!!! ATTTTTCTTTTGAAAATTGT+AGG + chr2_1:27825977-27825996 Msa0203640:intron 15.0%
!!! TTTTTCTTTTGAAAATTGTA+GGG + chr2_1:27825978-27825997 Msa0203640:intron 15.0%
!! AAAAACTTAGCAATAATAAT+GGG - chr2_1:27826473-27826492 None:intergenic 15.0%
!! TAAAAACTTAGCAATAATAA+TGG - chr2_1:27826474-27826493 None:intergenic 15.0%
!!! AATTTTTAAAACATTTTGCA+GGG - chr2_1:27826528-27826547 None:intergenic 15.0%
!!! AAATTTTTAAAACATTTTGC+AGG - chr2_1:27826529-27826548 None:intergenic 15.0%
!!! AACTTTTTATATTTCAGAAA+AGG + chr2_1:27827190-27827209 Msa0203640:intron 15.0%
!!! ACTTTTTATATTTCAGAAAA+GGG + chr2_1:27827191-27827210 Msa0203640:intron 15.0%
!! TTAAAAACATAAATATTTGG+TGG + chr2_1:27827337-27827356 Msa0203640:intron 15.0%
!! TAAAAACATAAATATTTGGT+GGG + chr2_1:27827338-27827357 Msa0203640:intron 15.0%
!!! TTTTTTAATCAAGATAATGA+CGG + chr2_1:27827559-27827578 Msa0203640:intron 15.0%
!! AATAGAAATCCATTTAAAAA+AGG + chr2_1:27827866-27827885 Msa0203640:intron 15.0%
!!! TTAATAATGTCTAAAATGTA+GGG + chr2_1:27828166-27828185 Msa0203640:intron 15.0%
!! ATATTAGTTGAAAACATAAA+AGG + chr2_1:27828238-27828257 Msa0203640:intron 15.0%
!! ATAAATCGAAAGAAATAAAA+GGG - chr2_1:27830346-27830365 None:intergenic 15.0%
!!! GAAAAAGCATTTTTTATAAA+TGG - chr2_1:27830857-27830876 None:intergenic 15.0%
!! ATATATTGATAGGATTAATA+AGG - chr2_1:27830950-27830969 None:intergenic 15.0%
!! ATATTTCAAGATATATTGAT+AGG - chr2_1:27830960-27830979 None:intergenic 15.0%
!! ATTATATTAAAATAATCTGG+TGG - chr2_1:27832265-27832284 None:intergenic 15.0%
!! CAGATTATATTAAAATAATC+TGG - chr2_1:27832268-27832287 None:intergenic 15.0%
!! TCTAAACAAAAATACTTACA+AGG + chr2_1:27822751-27822770 Msa0203640:intron 20.0%
!! AAATTTATAGTTTGATTGGT+TGG + chr2_1:27822820-27822839 Msa0203640:intron 20.0%
!!! AAAACGTTTGAAATTTTTGA+AGG + chr2_1:27823148-27823167 Msa0203640:intron 20.0%
!! GATACAAGATATATAATTTC+TGG + chr2_1:27823170-27823189 Msa0203640:intron 20.0%
!! ATGTATTTCACTTTATTGTA+AGG + chr2_1:27823654-27823673 Msa0203640:intron 20.0%
!! AAAATTTCAAGGTAAAGTAA+TGG + chr2_1:27823841-27823860 Msa0203640:intron 20.0%
!!! TTTTATAAATAAAGATGCAG+AGG + chr2_1:27824615-27824634 Msa0203640:intron 20.0%
!! AAAACCTTCAAATTAATACT+TGG - chr2_1:27824957-27824976 None:intergenic 20.0%
!!! ATGTCAATTATGTTTTTAGA+TGG + chr2_1:27825469-27825488 Msa0203640:intron 20.0%
!! GATTATATTAGATACTTTCT+AGG + chr2_1:27825528-27825547 Msa0203640:intron 20.0%
!! AAACTCAAATACTTCAAAAA+TGG - chr2_1:27825616-27825635 None:intergenic 20.0%
!!! TCAAAAGAAAAATCTTTTGT+CGG - chr2_1:27825970-27825989 None:intergenic 20.0%
!!! TTTTCTTTTGAAAATTGTAG+GGG + chr2_1:27825979-27825998 Msa0203640:intron 20.0%
!! TAATATTAATCCAACAATCT+TGG + chr2_1:27826331-27826350 Msa0203640:intron 20.0%
!!! GAAAATGATAAAAGTACTTA+TGG - chr2_1:27827108-27827127 None:intergenic 20.0%
!!! TTCATTACATTACATTGTTT+TGG + chr2_1:27827125-27827144 Msa0203640:intron 20.0%
!! AAAAAGTTAGATGTCAATAT+CGG - chr2_1:27827178-27827197 None:intergenic 20.0%
!!! CTTTTTATATTTCAGAAAAG+GGG + chr2_1:27827192-27827211 Msa0203640:intron 20.0%
!!! TAAATGGATTTCTATTGTTA+AGG - chr2_1:27827862-27827881 None:intergenic 20.0%
!!! TTTTCTTGACCTTTTTTAAA+TGG - chr2_1:27827878-27827897 None:intergenic 20.0%
!! AAAACAAGAAAAAATGCATT+TGG + chr2_1:27827894-27827913 Msa0203640:intron 20.0%
!! AAACAAGAAAAAATGCATTT+GGG + chr2_1:27827895-27827914 Msa0203640:intron 20.0%
!! AGAAAACAAATTAAAGAGAA+AGG + chr2_1:27827920-27827939 Msa0203640:intron 20.0%
!!! TCAATTTTTTTGTTAAACCT+TGG + chr2_1:27828002-27828021 Msa0203640:intron 20.0%
!!! ACAATGTATTATTTTATCGT+AGG - chr2_1:27828046-27828065 None:intergenic 20.0%
!!! TAAAAACGTTATGCTTTTAT+GGG - chr2_1:27828101-27828120 None:intergenic 20.0%
!!! TTAAAAACGTTATGCTTTTA+TGG - chr2_1:27828102-27828121 None:intergenic 20.0%
!!! GTTAATAATGTCTAAAATGT+AGG + chr2_1:27828165-27828184 Msa0203640:intron 20.0%
!!! AATTTTATTGTAAGTCTAGA+TGG + chr2_1:27828494-27828513 Msa0203640:intron 20.0%
!!! ATTTTATTGTAAGTCTAGAT+GGG + chr2_1:27828495-27828514 Msa0203640:intron 20.0%
!! TAATGAGTTTGATCAAAATA+TGG + chr2_1:27828735-27828754 Msa0203640:intron 20.0%
!! AACAACAAAATACAAAATCA+TGG - chr2_1:27829290-27829309 None:intergenic 20.0%
!!! TGAAAACATATTTAGTTCTT+CGG - chr2_1:27829351-27829370 None:intergenic 20.0%
!!! AATTGTAAAAACTGTTTTCA+TGG + chr2_1:27829582-27829601 Msa0203640:intron 20.0%
!! ATCCATTTCAAAAAAGTAAT+AGG - chr2_1:27829708-27829727 None:intergenic 20.0%
!! CATAAATCGAAAGAAATAAA+AGG - chr2_1:27830347-27830366 None:intergenic 20.0%
!! TAAAAGCTTATAATAAGTGA+CGG - chr2_1:27830678-27830697 None:intergenic 20.0%
!!! TATAAATGGTCTTACAATTA+GGG - chr2_1:27830843-27830862 None:intergenic 20.0%
!!! TTATAAATGGTCTTACAATT+AGG - chr2_1:27830844-27830863 None:intergenic 20.0%
!!! TAATAAGGAGTATATTTGAA+AGG - chr2_1:27830935-27830954 None:intergenic 20.0%
!! ATGAAAAACATTCTATACAA+TGG + chr2_1:27830978-27830997 Msa0203640:intron 20.0%
!! TGAAAAACATTCTATACAAT+GGG + chr2_1:27830979-27830998 Msa0203640:intron 20.0%
!! TTGAAACTGAACTTATATTT+AGG + chr2_1:27831164-27831183 Msa0203640:intron 20.0%
!!! TTTCTTTTTCCTTTCAAAAA+TGG + chr2_1:27831188-27831207 Msa0203640:intron 20.0%
!! TTTAATTGAAAACAAAAACC+AGG + chr2_1:27831270-27831289 Msa0203640:intron 20.0%
!! TTGTTTAATTGCCATATTAA+AGG + chr2_1:27832108-27832127 Msa0203640:three_prime_UTR 20.0%
!!! GATTTTGATTTTGATGTTTG+TGG - chr2_1:27821865-27821884 None:intergenic 25.0%
!! ATGATGAATTTTCTCATAGT+TGG + chr2_1:27822244-27822263 Msa0203640:intron 25.0%
!! TTCAAATAATTGACTTTCTC+AGG - chr2_1:27822450-27822469 None:intergenic 25.0%
!!! TTTGGTCATGTAAGTTTTTT+TGG + chr2_1:27822588-27822607 Msa0203640:intron 25.0%
!! AGAGTTGCATTTTTCATTTT+GGG + chr2_1:27823124-27823143 Msa0203640:intron 25.0%
! AGGAATGTAAATTTAGTCAT+TGG + chr2_1:27823356-27823375 Msa0203640:intron 25.0%
! GCTTCAAAACATATATCATA+TGG - chr2_1:27823472-27823491 None:intergenic 25.0%
!!! TTTGAAGCATCTTTTTTCTT+AGG + chr2_1:27823484-27823503 Msa0203640:intron 25.0%
!!! CATCTTTTTTCTTAGGTTTA+TGG + chr2_1:27823491-27823510 Msa0203640:intron 25.0%
! GACATAATTTACTTAAACCT+AGG + chr2_1:27823515-27823534 Msa0203640:intron 25.0%
!!! ATATACAATTTTAACAGCCA+GGG - chr2_1:27823605-27823624 None:intergenic 25.0%
! ATCTATTACTTCTTTCTGAA+TGG + chr2_1:27823623-27823642 Msa0203640:intron 25.0%
!!! ACAACTTTGGAGTTAAAATT+TGG - chr2_1:27823728-27823747 None:intergenic 25.0%
!! TTGAAATTTTACAAAACGTG+CGG - chr2_1:27823831-27823850 None:intergenic 25.0%
! TTCTACAATAATCTACTTGA+TGG + chr2_1:27823983-27824002 Msa0203640:CDS 25.0%
! GAGTTAGATAAAACAAAATG+TGG + chr2_1:27824285-27824304 Msa0203640:CDS 25.0%
! TATAAAGTAAACTGCTGAAT+GGG - chr2_1:27824405-27824424 None:intergenic 25.0%
! ATATAAAGTAAACTGCTGAA+TGG - chr2_1:27824406-27824425 None:intergenic 25.0%
! GAATTCAGTTATTTGGATAA+AGG + chr2_1:27824647-27824666 Msa0203640:intron 25.0%
!! CAAATTAATACTTGGTGAAT+AGG - chr2_1:27824949-27824968 None:intergenic 25.0%
!! TTCACCAAGTATTAATTTGA+AGG + chr2_1:27824950-27824969 Msa0203640:intron 25.0%
! TGTAATGTAAGCATTATGTT+TGG - chr2_1:27825031-27825050 None:intergenic 25.0%
! TCGTATATTCTGATATAGAT+GGG - chr2_1:27825063-27825082 None:intergenic 25.0%
! ATCGTATATTCTGATATAGA+TGG - chr2_1:27825064-27825083 None:intergenic 25.0%
! TAGCAAAGATTTATCTTATC+CGG + chr2_1:27825446-27825465 Msa0203640:intron 25.0%
! CTAAAAACATAATTGACATC+CGG - chr2_1:27825468-27825487 None:intergenic 25.0%
!! GGCTTTAATATTATGTAAGT+TGG + chr2_1:27825703-27825722 Msa0203640:intron 25.0%
!!! AAATTTGATTTTACCTTTGC+AGG + chr2_1:27826207-27826226 Msa0203640:intron 25.0%
!!! CAAAAAGATTTGGTGAAAAT+AGG - chr2_1:27826282-27826301 None:intergenic 25.0%
!! CTATTTTCACCAAATCTTTT+TGG + chr2_1:27826280-27826299 Msa0203640:intron 25.0%
!! ATCATTATTTCTTTGTGAGA+GGG - chr2_1:27826389-27826408 None:intergenic 25.0%
! ACAATATTACAATATCCCAA+GGG - chr2_1:27826429-27826448 None:intergenic 25.0%
!! TTTTTGACGTTAATGAAAGT+TGG + chr2_1:27826501-27826520 Msa0203640:intron 25.0%
! ATGATATCCATAATTTGAAG+TGG + chr2_1:27826550-27826569 Msa0203640:intron 25.0%
!! GATTTTTCCACTTCAAATTA+TGG - chr2_1:27826560-27826579 None:intergenic 25.0%
!!! TTTCTCTTTTTCATTTCTCA+AGG - chr2_1:27826582-27826601 None:intergenic 25.0%
! GAAATGAAAAAGAGAAACTT+TGG + chr2_1:27826585-27826604 Msa0203640:intron 25.0%
! TTCACTAATGTTTATTCAGT+CGG - chr2_1:27826617-27826636 None:intergenic 25.0%
!!! CTAACAAATTTGCTCATTTT+AGG - chr2_1:27826655-27826674 None:intergenic 25.0%
!!! ATATAATTAGATTTTGGAGC+AGG - chr2_1:27826680-27826699 None:intergenic 25.0%
! ACAGGATAGACAAATTAATT+GGG - chr2_1:27827012-27827031 None:intergenic 25.0%
! TTTGAAAAAAAATGAAGGAC+AGG - chr2_1:27827030-27827049 None:intergenic 25.0%
!!! TGTCCTTCATTTTTTTTCAA+AGG + chr2_1:27827029-27827048 Msa0203640:intron 25.0%
!! ATGCCTTTGAAAAAAAATGA+AGG - chr2_1:27827035-27827054 None:intergenic 25.0%
! TTTAACAAGAAATACGACAA+TGG - chr2_1:27827076-27827095 None:intergenic 25.0%
!!! TATTTAAGACCAATTCCTTT+TGG + chr2_1:27827308-27827327 Msa0203640:intron 25.0%
!!! TGTTTTTAAGATCATCCAAA+AGG - chr2_1:27827326-27827345 None:intergenic 25.0%
! CTCTATTTAATACAAAGTAG+CGG + chr2_1:27827395-27827414 Msa0203640:intron 25.0%
! GCCAAATGATAGATATAAAA+TGG + chr2_1:27827505-27827524 Msa0203640:intron 25.0%
!!! GCCATTTTATATCTATCATT+TGG - chr2_1:27827509-27827528 None:intergenic 25.0%
! TTGATTCAATAATCTTATCC+TGG + chr2_1:27827704-27827723 Msa0203640:intron 25.0%
! TGATTCAATAATCTTATCCT+GGG + chr2_1:27827705-27827724 Msa0203640:intron 25.0%
! AACAAGAAAAAATGCATTTG+GGG + chr2_1:27827896-27827915 Msa0203640:intron 25.0%
! TGAACACTTTATTATGATTG+TGG + chr2_1:27827956-27827975 Msa0203640:intron 25.0%
!! TTTTTGTTAAACCTTGGTTA+AGG + chr2_1:27828008-27828027 Msa0203640:intron 25.0%
!! TATGCTTTTATGGGTAAAAA+TGG - chr2_1:27828092-27828111 None:intergenic 25.0%
!! GTTTCTGTTATAGTTTTTCT+AGG - chr2_1:27828694-27828713 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr2_1:27828755-27828774 Msa0203640:intron 25.0%
! CATAGCCAACAATTTAAATA+AGG - chr2_1:27828864-27828883 None:intergenic 25.0%
! CAAATCATATAAGTGTCATA+TGG + chr2_1:27828962-27828981 Msa0203640:intron 25.0%
! ATATAAGTGTCATATGGTTT+CGG + chr2_1:27828968-27828987 Msa0203640:intron 25.0%
! TTAAACACAACATCTTAAGA+AGG + chr2_1:27829002-27829021 Msa0203640:intron 25.0%
! TTCATAAGAATGGGAAAAAA+AGG + chr2_1:27829039-27829058 Msa0203640:intron 25.0%
! TTAAGTAGTGTTTATAAGCT+TGG + chr2_1:27829197-27829216 Msa0203640:intron 25.0%
! TAAGTAGTGTTTATAAGCTT+GGG + chr2_1:27829198-27829217 Msa0203640:intron 25.0%
!! AGTTTTCTATGGTTTAGTTA+GGG + chr2_1:27829241-27829260 Msa0203640:intron 25.0%
!! AGTAGCCTTTTCATATTAAA+TGG - chr2_1:27829517-27829536 None:intergenic 25.0%
! GTTGCTATAGTAATTGTAAT+TGG + chr2_1:27829540-27829559 Msa0203640:intron 25.0%
!! GTTTTTACAATTTGCAAGAA+GGG - chr2_1:27829574-27829593 None:intergenic 25.0%
!! AGTTTTTACAATTTGCAAGA+AGG - chr2_1:27829575-27829594 None:intergenic 25.0%
!!! GTCCTATTACTTTTTTGAAA+TGG + chr2_1:27829703-27829722 Msa0203640:intron 25.0%
! AATCATTTGCAAGATGTAAT+TGG - chr2_1:27829908-27829927 None:intergenic 25.0%
! AAAACCTATAAGAAAGTGAT+GGG - chr2_1:27829948-27829967 None:intergenic 25.0%
! AAAAACCTATAAGAAAGTGA+TGG - chr2_1:27829949-27829968 None:intergenic 25.0%
! TAGATCTCTTGAAGAAAATT+TGG + chr2_1:27830025-27830044 Msa0203640:intron 25.0%
! TGTTATTCTTTGCATTGAAA+AGG + chr2_1:27830124-27830143 Msa0203640:CDS 25.0%
! AATTACCTTTACAGTGATTA+GGG - chr2_1:27830312-27830331 None:intergenic 25.0%
! TAATTACCTTTACAGTGATT+AGG - chr2_1:27830313-27830332 None:intergenic 25.0%
!!! ATTGTTTTGTCAGAACATTT+AGG - chr2_1:27830500-27830519 None:intergenic 25.0%
! TAATATCAATCTAGAAAACC+CGG + chr2_1:27830581-27830600 Msa0203640:CDS 25.0%
! TCACATATATCAAGAAAAGT+AGG + chr2_1:27830703-27830722 Msa0203640:intron 25.0%
! CACATATATCAAGAAAAGTA+GGG + chr2_1:27830704-27830723 Msa0203640:intron 25.0%
! TATACATAAAAGGGTAGTTT+AGG - chr2_1:27830766-27830785 None:intergenic 25.0%
! AGACACAACTATACATAAAA+GGG - chr2_1:27830775-27830794 None:intergenic 25.0%
! TAGACACAACTATACATAAA+AGG - chr2_1:27830776-27830795 None:intergenic 25.0%
! TAATAACTGCATCTGAAAAT+TGG - chr2_1:27830900-27830919 None:intergenic 25.0%
! GAAAAACATTCTATACAATG+GGG + chr2_1:27830980-27830999 Msa0203640:intron 25.0%
! AAAAACATTCTATACAATGG+GGG + chr2_1:27830981-27831000 Msa0203640:intron 25.0%
! ACAAAGGTAGTATCATTTAT+GGG + chr2_1:27831224-27831243 Msa0203640:intron 25.0%
!!! TTGTCTAATTCATTTGGTTT+TGG + chr2_1:27831346-27831365 Msa0203640:CDS 25.0%
! CAAAAATGATTGAAGAATTG+TGG - chr2_1:27831375-27831394 None:intergenic 25.0%
! AAAATCTGCTTCACTTAAAA+GGG - chr2_1:27831399-27831418 None:intergenic 25.0%
! AAAAATCTGCTTCACTTAAA+AGG - chr2_1:27831400-27831419 None:intergenic 25.0%
! AATACCTTGTTAATGATGAT+AGG - chr2_1:27831440-27831459 None:intergenic 25.0%
!! ATCATCATTAACAAGGTATT+TGG + chr2_1:27831440-27831459 Msa0203640:intron 25.0%
!! ACTATTTTCATAAGCTATCA+TGG - chr2_1:27831644-27831663 None:intergenic 25.0%
! TTAGTATGCTATAAAACACT+TGG + chr2_1:27831749-27831768 Msa0203640:intron 25.0%
!! TTGATTTTGATGTTTGTGGT+TGG - chr2_1:27821861-27821880 None:intergenic 30.0%
AAAGAAAGAATGAAGGAGAA+AGG - chr2_1:27821918-27821937 None:intergenic 30.0%
AGAGATGAAAGAAAGAATGA+AGG - chr2_1:27821925-27821944 None:intergenic 30.0%
ATGAAGAGAATGAATGAGAA+TGG - chr2_1:27821954-27821973 None:intergenic 30.0%
ATTCTCATTCATTCTCTTCA+TGG + chr2_1:27821953-27821972 Msa0203640:exon 30.0%
!!! TTACACGCGTTTTTTCATTT+TGG + chr2_1:27822570-27822589 Msa0203640:intron 30.0%
GGTATCATGGAACATAAATA+TGG + chr2_1:27822841-27822860 Msa0203640:intron 30.0%
TCATGGAACATAAATATGGT+TGG + chr2_1:27822845-27822864 Msa0203640:intron 30.0%
ACAACCATGATATGATTAGA+GGG - chr2_1:27823077-27823096 None:intergenic 30.0%
TACAACCATGATATGATTAG+AGG - chr2_1:27823078-27823097 None:intergenic 30.0%
! GAGAGTTGCATTTTTCATTT+TGG + chr2_1:27823123-27823142 Msa0203640:intron 30.0%
! GAGTTGCATTTTTCATTTTG+GGG + chr2_1:27823125-27823144 Msa0203640:intron 30.0%
!! CTACATATAAAGCATTGACA+CGG + chr2_1:27823199-27823218 Msa0203640:intron 30.0%
ACGTCTTAAATATGAAGTGT+TGG + chr2_1:27823295-27823314 Msa0203640:intron 30.0%
ATAGTAGAGAATGCAATCAA+TGG - chr2_1:27823552-27823571 None:intergenic 30.0%
!! ACTTTAAGATTATGATTCCC+TGG + chr2_1:27823585-27823604 Msa0203640:intron 30.0%
!! GATATACAATTTTAACAGCC+AGG - chr2_1:27823606-27823625 None:intergenic 30.0%
ATTACTTCTTTCTGAATGGT+TGG + chr2_1:27823627-27823646 Msa0203640:intron 30.0%
TGCTTTCTTGAATGTTTAGT+AGG + chr2_1:27823694-27823713 Msa0203640:intron 30.0%
!! ACTTTGGAGTTAAAATTTGG+AGG - chr2_1:27823725-27823744 None:intergenic 30.0%
AGTAAATCATGAGTCAAATC+TGG - chr2_1:27823768-27823787 None:intergenic 30.0%
! GCACGTTTTGTAAAATTTCA+AGG + chr2_1:27823830-27823849 Msa0203640:intron 30.0%
AGATTATTGTAGAAGACATC+TGG - chr2_1:27823977-27823996 None:intergenic 30.0%
GAAGAAATATTCTTTACCGT+TGG - chr2_1:27824055-27824074 None:intergenic 30.0%
CAACGAATATGAATGAACTT+TGG - chr2_1:27824077-27824096 None:intergenic 30.0%
ATCAAATCTTTCTCAACTGA+TGG + chr2_1:27824153-27824172 Msa0203640:CDS 30.0%
TGGAATTACTGAAGAAGTAA+TGG + chr2_1:27824260-27824279 Msa0203640:CDS 30.0%
!!! ACAAAATGTGGTGTTTTGAT+TGG + chr2_1:27824297-27824316 Msa0203640:CDS 30.0%
GCATAATAACATTCGTTTGT+AGG + chr2_1:27824435-27824454 Msa0203640:intron 30.0%
AATAACATTCGTTTGTAGGA+AGG + chr2_1:27824439-27824458 Msa0203640:intron 30.0%
AAGAAGGGAATTCAGTTATT+TGG + chr2_1:27824640-27824659 Msa0203640:intron 30.0%
CAGTTATTTGGATAAAGGAT+TGG + chr2_1:27824652-27824671 Msa0203640:intron 30.0%
! TATTTGGATAAAGGATTGGT+AGG + chr2_1:27824656-27824675 Msa0203640:intron 30.0%
! ATTTGGATAAAGGATTGGTA+GGG + chr2_1:27824657-27824676 Msa0203640:intron 30.0%
AATCTCTGTAATTCTTGGAA+CGG + chr2_1:27824687-27824706 Msa0203640:intron 30.0%
ACAATTATGTAGTTGTGATC+AGG + chr2_1:27824886-27824905 Msa0203640:intron 30.0%
TGAACATGAAAACAAACATG+TGG - chr2_1:27824923-27824942 None:intergenic 30.0%
!! AATTTGAAGGTTTTAGTCGT+AGG + chr2_1:27824963-27824982 Msa0203640:intron 30.0%
TGTAAGCATTATGTTTGGAA+CGG - chr2_1:27825026-27825045 None:intergenic 30.0%
GTATATTCTGATATAGATGG+GGG - chr2_1:27825061-27825080 None:intergenic 30.0%
CGTATATTCTGATATAGATG+GGG - chr2_1:27825062-27825081 None:intergenic 30.0%
! ATGTTTTTCTGACACAAATC+CGG - chr2_1:27825397-27825416 None:intergenic 30.0%
! AGGTACAAATCTGAAAGTAT+TGG + chr2_1:27825548-27825567 Msa0203640:intron 30.0%
! TTGAAGTATTTGAGTTTCAG+AGG + chr2_1:27825619-27825638 Msa0203640:intron 30.0%
ACCATTTGCAACAACAAATA+TGG + chr2_1:27825836-27825855 Msa0203640:CDS 30.0%
CCATTTGCAACAACAAATAT+GGG + chr2_1:27825837-27825856 Msa0203640:CDS 30.0%
GAAACTTGAGACAAAAAACA+AGG - chr2_1:27825948-27825967 None:intergenic 30.0%
CTGTGGATATTGAATAGTTT+GGG - chr2_1:27826013-27826032 None:intergenic 30.0%
GCTGCAAACCATATAATTAA+AGG + chr2_1:27826065-27826084 Msa0203640:CDS 30.0%
CAGCTTCACCTTTAATTATA+TGG - chr2_1:27826076-27826095 None:intergenic 30.0%
! CTTCTAAGAGACAAATAGTT+TGG - chr2_1:27826144-27826163 None:intergenic 30.0%
TTTGTCTCTTAGAAGAAGTT+TGG + chr2_1:27826149-27826168 Msa0203640:intron 30.0%
TTGTCTCTTAGAAGAAGTTT+GGG + chr2_1:27826150-27826169 Msa0203640:intron 30.0%
! GATCATTATTTCTTTGTGAG+AGG - chr2_1:27826390-27826409 None:intergenic 30.0%
CACAATATTACAATATCCCA+AGG - chr2_1:27826430-27826449 None:intergenic 30.0%
CTTGGGATATTGTAATATTG+TGG + chr2_1:27826428-27826447 Msa0203640:intron 30.0%
ATGAAAAAGAGAAACTTTGG+AGG + chr2_1:27826588-27826607 Msa0203640:intron 30.0%
GCATTAATTGCAAAGTACAA+AGG + chr2_1:27826731-27826750 Msa0203640:intron 30.0%
CAGAATAAGAAGAAAGACTA+AGG - chr2_1:27826790-27826809 None:intergenic 30.0%
GACAGGATAGACAAATTAAT+TGG - chr2_1:27827013-27827032 None:intergenic 30.0%
! AGATGTAACATTTTACCATC+AGG - chr2_1:27827288-27827307 None:intergenic 30.0%
TAAGATCATCCAAAAGGAAT+TGG - chr2_1:27827320-27827339 None:intergenic 30.0%
AAAAAACACTATAAGCTCGT+GGG + chr2_1:27827590-27827609 Msa0203640:intron 30.0%
TCAACATATTAGACTCAGTT+TGG - chr2_1:27827688-27827707 None:intergenic 30.0%
GTTGACATTGTTTCAATTGA+TGG - chr2_1:27827817-27827836 None:intergenic 30.0%
ACACTTTATTATGATTGTGG+AGG + chr2_1:27827959-27827978 Msa0203640:intron 30.0%
AACACAAATTACCTTAACCA+AGG - chr2_1:27828022-27828041 None:intergenic 30.0%
! GCACGTTTTGCATATAATAT+AGG + chr2_1:27828211-27828230 Msa0203640:intron 30.0%
AAAATACTAGAGAGAGAGTT+GGG + chr2_1:27828533-27828552 Msa0203640:intron 30.0%
!! TAGAAAAGATGGTGGAAAAT+AGG + chr2_1:27828569-27828588 Msa0203640:intron 30.0%
CCAACAATTTAAATAAGGCT+TGG - chr2_1:27828859-27828878 None:intergenic 30.0%
!! CCAAGCCTTATTTAAATTGT+TGG + chr2_1:27828856-27828875 Msa0203640:intron 30.0%
ATTTCTAACATCGGTCTTTA+TGG - chr2_1:27829087-27829106 None:intergenic 30.0%
CAAGACAGAATTTCTAACAT+CGG - chr2_1:27829096-27829115 None:intergenic 30.0%
ACTACTTAAGTCATATCTCT+AGG - chr2_1:27829186-27829205 None:intergenic 30.0%
CTAACTAAACCATAGAAAAC+TGG - chr2_1:27829242-27829261 None:intergenic 30.0%
! CAGTTTTCTATGGTTTAGTT+AGG + chr2_1:27829240-27829259 Msa0203640:intron 30.0%
! GTTTTCTATGGTTTAGTTAG+GGG + chr2_1:27829242-27829261 Msa0203640:intron 30.0%
ATGGTCAGTTCTTAGTATTT+GGG - chr2_1:27829271-27829290 None:intergenic 30.0%
AAAACAGGGAAATATGTCTT+TGG - chr2_1:27829465-27829484 None:intergenic 30.0%
! AGACATATTTCCCTGTTTTA+TGG + chr2_1:27829466-27829485 Msa0203640:intron 30.0%
TTGCGCCATTTAATATGAAA+AGG + chr2_1:27829509-27829528 Msa0203640:intron 30.0%
CTTCGTCTATGATAATTACA+TGG + chr2_1:27829623-27829642 Msa0203640:intron 30.0%
! TTTTCTAACAAAACATGCCT+TGG - chr2_1:27829672-27829691 None:intergenic 30.0%
! AAATGGATGCTAAAGCTTTT+TGG + chr2_1:27829720-27829739 Msa0203640:intron 30.0%
GCACAATCTCTAAATTATCA+TGG - chr2_1:27829886-27829905 None:intergenic 30.0%
! GATGGGAAAATGTTTTTCAT+TGG - chr2_1:27829931-27829950 None:intergenic 30.0%
! TTTTCCCATCACTTTCTTAT+AGG + chr2_1:27829941-27829960 Msa0203640:intron 30.0%
! TCTTGAAGAAAATTTGGTTC+TGG + chr2_1:27830031-27830050 Msa0203640:intron 30.0%
! TAATCAAGACATGATTTGCA+GGG - chr2_1:27830061-27830080 None:intergenic 30.0%
! ATAATCAAGACATGATTTGC+AGG - chr2_1:27830062-27830081 None:intergenic 30.0%
GGAACAAATTCATAAACAAG+TGG - chr2_1:27830472-27830491 None:intergenic 30.0%
!! CTTTTTGTTTGACTTCATGT+AGG + chr2_1:27830533-27830552 Msa0203640:intron 30.0%
! GGGTTTTCTAGATTGATATT+AGG - chr2_1:27830582-27830601 None:intergenic 30.0%
! TTTTCAAACATAGGAGAGAA+TGG - chr2_1:27830635-27830654 None:intergenic 30.0%
! CACAACACATTTTCAAACAT+AGG - chr2_1:27830644-27830663 None:intergenic 30.0%
! AGGGAGTATAAGTTTATCTT+GGG - chr2_1:27830816-27830835 None:intergenic 30.0%
!! GGTAGATGGTCTTATATTTA+GGG - chr2_1:27830879-27830898 None:intergenic 30.0%
!! TGGTAGATGGTCTTATATTT+AGG - chr2_1:27830880-27830899 None:intergenic 30.0%
! TGTAAGACGGTCTTATAAAA+AGG + chr2_1:27831077-27831096 Msa0203640:intron 30.0%
! GTAAGACGGTCTTATAAAAA+GGG + chr2_1:27831078-27831097 Msa0203640:intron 30.0%
!!! CATGATAAGCCATTTTTGAA+AGG - chr2_1:27831200-27831219 None:intergenic 30.0%
GACAAAGGTAGTATCATTTA+TGG + chr2_1:27831223-27831242 Msa0203640:intron 30.0%
CAAAGGTAGTATCATTTATG+GGG + chr2_1:27831225-27831244 Msa0203640:intron 30.0%
!!! TCTAATTCATTTGGTTTTGG+TGG + chr2_1:27831349-27831368 Msa0203640:CDS 30.0%
AAATCTGCTTCACTTAAAAG+GGG - chr2_1:27831398-27831417 None:intergenic 30.0%
TGTCATAAGATAAACTCGTA+AGG + chr2_1:27831545-27831564 Msa0203640:intron 30.0%
CTGCTCAAAAAATATCATGT+CGG + chr2_1:27832010-27832029 Msa0203640:three_prime_UTR 30.0%
TCAAGTGATTGATTGTGTAA+CGG - chr2_1:27832074-27832093 None:intergenic 30.0%
TTACACAATCAATCACTTGA+TGG + chr2_1:27832074-27832093 Msa0203640:three_prime_UTR 30.0%
TACACAATCAATCACTTGAT+GGG + chr2_1:27832075-27832094 Msa0203640:three_prime_UTR 30.0%
! CCACATTTTCTCCTTTAATA+TGG - chr2_1:27832122-27832141 None:intergenic 30.0%
CCATATTAAAGGAGAAAATG+TGG + chr2_1:27832119-27832138 Msa0203640:three_prime_UTR 30.0%
! TTTTGAGCTGACAAAAGATT+AGG + chr2_1:27832162-27832181 Msa0203640:three_prime_UTR 30.0%
TTCATTGAAATTTATGCCTG+AGG + chr2_1:27832192-27832211 Msa0203640:three_prime_UTR 30.0%
CTTAAATTGAAATCAACCTC+AGG - chr2_1:27832211-27832230 None:intergenic 30.0%
! TTTGTTGTACTTCTACTTAG+TGG + chr2_1:27832323-27832342 Msa0203640:three_prime_UTR 30.0%
AAAAGGCTAGAACTATATAG+AGG - chr2_1:27832385-27832404 None:intergenic 30.0%
!!! TATAGTTCTAGCCTTTTTAG+TGG + chr2_1:27832388-27832407 Msa0203640:three_prime_UTR 30.0%
TCAAATGTTGACCACTAAAA+AGG - chr2_1:27832402-27832421 None:intergenic 30.0%
AATGAAGGAGAAAGGTTAAG+AGG - chr2_1:27821910-27821929 None:intergenic 35.0%
AAGTGTGAAATTACCAGAAC+GGG - chr2_1:27822123-27822142 None:intergenic 35.0%
GAAGTGTGAAATTACCAGAA+CGG - chr2_1:27822124-27822143 None:intergenic 35.0%
! AGTTTGATTGGTTGGTATCA+TGG + chr2_1:27822828-27822847 Msa0203640:intron 35.0%
GGAACATAAATATGGTTGGT+TGG + chr2_1:27822849-27822868 Msa0203640:intron 35.0%
TAGTCAGAACTTCAGAGATA+AGG + chr2_1:27822872-27822891 Msa0203640:intron 35.0%
AACCATGATATGATTAGAGG+GGG - chr2_1:27823075-27823094 None:intergenic 35.0%
CAACCATGATATGATTAGAG+GGG - chr2_1:27823076-27823095 None:intergenic 35.0%
! CTTCATATTTAAGACGTGTC+CGG - chr2_1:27823292-27823311 None:intergenic 35.0%
TAAAGTAATGGCTGTAGCTT+TGG + chr2_1:27823853-27823872 Msa0203640:CDS 35.0%
!! AATCTACTTGATGGTGTTAG+TGG + chr2_1:27823992-27824011 Msa0203640:CDS 35.0%
!! ATCTACTTGATGGTGTTAGT+GGG + chr2_1:27823993-27824012 Msa0203640:CDS 35.0%
TGATTGTGCACAATATCCAA+CGG + chr2_1:27824036-27824055 Msa0203640:CDS 35.0%
TAAGTATTCTCTGTTTCCAG+AGG + chr2_1:27824118-27824137 Msa0203640:intron 35.0%
! TAGCACCAAAGTTTTCAAAG+AGG + chr2_1:27824181-27824200 Msa0203640:CDS 35.0%
! ACCAAAGTTTTCAAAGAGGA+TGG + chr2_1:27824185-27824204 Msa0203640:CDS 35.0%
! TCCATCCTCTTTGAAAACTT+TGG - chr2_1:27824189-27824208 None:intergenic 35.0%
TTGTTAGTAATAAGCCACCT+AGG + chr2_1:27824467-27824486 Msa0203640:intron 35.0%
TGTTAGTAATAAGCCACCTA+GGG + chr2_1:27824468-27824487 Msa0203640:intron 35.0%
TATATATAACTTCTGCCCCT+AGG - chr2_1:27824487-27824506 None:intergenic 35.0%
AGATAACAGTTACTGCAGAT+TGG - chr2_1:27824566-27824585 None:intergenic 35.0%
TGCAGAACTTTAACTGCTAT+AGG + chr2_1:27824585-27824604 Msa0203640:intron 35.0%
GCAGAACTTTAACTGCTATA+GGG + chr2_1:27824586-27824605 Msa0203640:intron 35.0%
TAAAGATGCAGAGGAAAAGA+AGG + chr2_1:27824624-27824643 Msa0203640:intron 35.0%
AAAGATGCAGAGGAAAAGAA+GGG + chr2_1:27824625-27824644 Msa0203640:intron 35.0%
AGACCAATCTCTGTAATTCT+TGG + chr2_1:27824682-27824701 Msa0203640:intron 35.0%
GTTCCAAGAATTACAGAGAT+TGG - chr2_1:27824688-27824707 None:intergenic 35.0%
! CGTGTCGGTATAATTACAAT+GGG - chr2_1:27824744-27824763 None:intergenic 35.0%
CCATTGTAATTATACCGACA+CGG + chr2_1:27824742-27824761 Msa0203640:intron 35.0%
! TTTTAGTCGTAGGTTTGCAA+CGG + chr2_1:27824973-27824992 Msa0203640:intron 35.0%
TGAGATTCGTAAAGCTTCAA+TGG - chr2_1:27825790-27825809 None:intergenic 35.0%
GTTGCAAATGGTACACAAAA+AGG - chr2_1:27825828-27825847 None:intergenic 35.0%
!! CCCATATTTGTTGTTGCAAA+TGG - chr2_1:27825840-27825859 None:intergenic 35.0%
TGGAGTCGATAATATGTTCT+TGG - chr2_1:27825915-27825934 None:intergenic 35.0%
!! TCTTTTGAAAATTGTAGGGG+TGG + chr2_1:27825982-27826001 Msa0203640:intron 35.0%
GCTGTGGATATTGAATAGTT+TGG - chr2_1:27826014-27826033 None:intergenic 35.0%
! AGAAGTTTGGGATAGCTATA+TGG + chr2_1:27826162-27826181 Msa0203640:intron 35.0%
GATGCTGCTATAATACCAAT+TGG + chr2_1:27826253-27826272 Msa0203640:CDS 35.0%
GGTGAAAATAGGATACCAAT+TGG - chr2_1:27826271-27826290 None:intergenic 35.0%
TCATGCAAGCCAAAAAGATT+TGG - chr2_1:27826292-27826311 None:intergenic 35.0%
! TAATCCAACAATCTTGGTGT+AGG + chr2_1:27826337-27826356 Msa0203640:intron 35.0%
CTTAATTCTTGACGAAGTGA+CGG + chr2_1:27826706-27826725 Msa0203640:intron 35.0%
ATATCACACAGGTATGCTAA+TGG - chr2_1:27826828-27826847 None:intergenic 35.0%
GATGCGTTTGATATAAGTAG+CGG + chr2_1:27827478-27827497 Msa0203640:intron 35.0%
GAAAAAACACTATAAGCTCG+TGG + chr2_1:27827589-27827608 Msa0203640:intron 35.0%
ATATTAGACTCAGTTTGGCA+AGG - chr2_1:27827683-27827702 None:intergenic 35.0%
TTGTTTCAATTGATGGAGGT+CGG - chr2_1:27827810-27827829 None:intergenic 35.0%
GACATTGTTTCAATTGATGG+AGG - chr2_1:27827814-27827833 None:intergenic 35.0%
ATACGTTCCCTTTATGTGTT+GGG + chr2_1:27828335-27828354 Msa0203640:intron 35.0%
ACTTGTACCCAACACATAAA+GGG - chr2_1:27828345-27828364 None:intergenic 35.0%
TACTTGTACCCAACACATAA+AGG - chr2_1:27828346-27828365 None:intergenic 35.0%
TTGGGTACAAGTATGAAAAG+AGG + chr2_1:27828353-27828372 Msa0203640:intron 35.0%
GTACAAGTATGAAAAGAGGA+AGG + chr2_1:27828357-27828376 Msa0203640:intron 35.0%
ATTGTAAGTCTAGATGGGAT+AGG + chr2_1:27828500-27828519 Msa0203640:intron 35.0%
GAAAATACTAGAGAGAGAGT+TGG + chr2_1:27828532-27828551 Msa0203640:intron 35.0%
AAATACTAGAGAGAGAGTTG+GGG + chr2_1:27828534-27828553 Msa0203640:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG + chr2_1:27828558-27828577 Msa0203640:intron 35.0%
ACCTATAGTAGAAAAGATGG+TGG + chr2_1:27828561-27828580 Msa0203640:intron 35.0%
! TCCACCATCTTTTCTACTAT+AGG - chr2_1:27828565-27828584 None:intergenic 35.0%
AAAATAGGCTTAGGTGGTTT+GGG + chr2_1:27828584-27828603 Msa0203640:intron 35.0%
GACCTGCAAATTCTATAGTA+AGG + chr2_1:27828620-27828639 Msa0203640:intron 35.0%
CTCCTTACTATAGAATTTGC+AGG - chr2_1:27828625-27828644 None:intergenic 35.0%
GAGGATAGTCAAATCACTAT+AGG + chr2_1:27828658-27828677 Msa0203640:intron 35.0%
CTTTAACAAGACATCTGATG+AGG + chr2_1:27828928-27828947 Msa0203640:intron 35.0%
AACATCTTAAGAAGGAGATG+TGG + chr2_1:27829010-27829029 Msa0203640:intron 35.0%
GTGAAAACAATCTTCCAAAC+AGG - chr2_1:27829065-27829084 None:intergenic 35.0%
GAAAACTGGATGGTAAAGTA+AGG - chr2_1:27829228-27829247 None:intergenic 35.0%
! CTTTACCATCCAGTTTTCTA+TGG + chr2_1:27829230-27829249 Msa0203640:intron 35.0%
CTAAACCATAGAAAACTGGA+TGG - chr2_1:27829238-27829257 None:intergenic 35.0%
CATGGTCAGTTCTTAGTATT+TGG - chr2_1:27829272-27829291 None:intergenic 35.0%
! GATATCATACCCCTTTCTTT+TGG + chr2_1:27829321-27829340 Msa0203640:intron 35.0%
GATCATCATGTATTATGCCA+AGG + chr2_1:27829652-27829671 Msa0203640:intron 35.0%
! TTTGTTGACTGTACTGTACT+GGG + chr2_1:27829977-27829996 Msa0203640:intron 35.0%
TTTCTCTATTCAACCACTAC+AGG + chr2_1:27830095-27830114 Msa0203640:intron 35.0%
TTCTCTATTCAACCACTACA+GGG + chr2_1:27830096-27830115 Msa0203640:intron 35.0%
!! GAAAAGGCATTAGCTAATTC+TGG + chr2_1:27830140-27830159 Msa0203640:CDS 35.0%
!! AGCTAATTCTGGAGTTTCAA+AGG + chr2_1:27830151-27830170 Msa0203640:CDS 35.0%
!! TAATTCTGGAGTTTCAAAGG+AGG + chr2_1:27830154-27830173 Msa0203640:CDS 35.0%
CAAAACAATGAATCAAAGCC+TGG - chr2_1:27830238-27830257 None:intergenic 35.0%
!! CAGGCTTTGATTCATTGTTT+TGG + chr2_1:27830236-27830255 Msa0203640:CDS 35.0%
! GAAAGTTTACCTCAGGATTT+TGG - chr2_1:27830262-27830281 None:intergenic 35.0%
CATGAAAGAAAGTTTACCTC+AGG - chr2_1:27830269-27830288 None:intergenic 35.0%
ATTCTCCCTAATCACTGTAA+AGG + chr2_1:27830304-27830323 Msa0203640:intron 35.0%
AATTCGACGAAGTCTATGAT+TGG + chr2_1:27830382-27830401 Msa0203640:CDS 35.0%
! TCTATGATTGGTCATCTACT+AGG + chr2_1:27830394-27830413 Msa0203640:CDS 35.0%
! TGTCAGAACATTTAGGTTAC+TGG - chr2_1:27830493-27830512 None:intergenic 35.0%
TTCATGTAGGCAATAAAGAC+AGG + chr2_1:27830546-27830565 Msa0203640:intron 35.0%
AAGCTTATAATAAGTGACGG+AGG - chr2_1:27830675-27830694 None:intergenic 35.0%
! GAGGGAGTATAAGTTTATCT+TGG - chr2_1:27830817-27830836 None:intergenic 35.0%
! AATGGTCTTACAATTAGGGA+CGG - chr2_1:27830839-27830858 None:intergenic 35.0%
TGCATCTGAAAATTGGTAGA+TGG - chr2_1:27830893-27830912 None:intergenic 35.0%
GTCTTATAAAAAGGGATGGA+GGG + chr2_1:27831086-27831105 Msa0203640:intron 35.0%
!! TGGAGGGAGAAGTATTAATA+AGG + chr2_1:27831102-27831121 Msa0203640:intron 35.0%
!! GGAGGGAGAAGTATTAATAA+GGG + chr2_1:27831103-27831122 Msa0203640:intron 35.0%
!! GAGGGAGAAGTATTAATAAG+GGG + chr2_1:27831104-27831123 Msa0203640:intron 35.0%
ATGATAGGAAGGTAAACACT+TGG - chr2_1:27831425-27831444 None:intergenic 35.0%
CCTTGTTAATGATGATAGGA+AGG - chr2_1:27831436-27831455 None:intergenic 35.0%
CCTTCCTATCATCATTAACA+AGG + chr2_1:27831433-27831452 Msa0203640:three_prime_UTR 35.0%
! TCCTTTTCTGATCCATCTTA+AGG + chr2_1:27831488-27831507 Msa0203640:intron 35.0%
ACCTTAAGATGGATCAGAAA+AGG - chr2_1:27831492-27831511 None:intergenic 35.0%
ATCCATCTTAAGGTTCTGTT+TGG + chr2_1:27831498-27831517 Msa0203640:intron 35.0%
ATCCAAACAGAACCTTAAGA+TGG - chr2_1:27831503-27831522 None:intergenic 35.0%
AAAAAGACTTGAGCCATGTT+TGG - chr2_1:27831788-27831807 None:intergenic 35.0%
AAGTAAGCAATCCATAACAC+AGG - chr2_1:27831888-27831907 None:intergenic 35.0%
! TGTGTTATGGATTGCTTACT+TGG + chr2_1:27831887-27831906 Msa0203640:three_prime_UTR 35.0%
AAACTCAATTCTATCTCACC+AGG - chr2_1:27831985-27832004 None:intergenic 35.0%
GGACGATGAATCATTATAGT+AGG + chr2_1:27832031-27832050 Msa0203640:three_prime_UTR 35.0%
ACACAATCAATCACTTGATG+GGG + chr2_1:27832076-27832095 Msa0203640:three_prime_UTR 35.0%
TGAGAGAAGAGAAGAGAACT+GGG - chr2_1:27821830-27821849 None:intergenic 40.0%
GATTGGGAGAAGAGAGATTA+AGG - chr2_1:27822094-27822113 None:intergenic 40.0%
GACACAATAAGCTAACGTCA+GGG - chr2_1:27822656-27822675 None:intergenic 40.0%
TGACACAATAAGCTAACGTC+AGG - chr2_1:27822657-27822676 None:intergenic 40.0%
! TTGGGCTAGATATAACGTCT+GGG + chr2_1:27822692-27822711 Msa0203640:intron 40.0%
! ACGTCTGGGATTAAAAGCAA+CGG + chr2_1:27822706-27822725 Msa0203640:intron 40.0%
!! AGCAACGGTGTTTAATTTGC+AGG + chr2_1:27822721-27822740 Msa0203640:intron 40.0%
!! GCAACGGTGTTTAATTTGCA+GGG + chr2_1:27822722-27822741 Msa0203640:intron 40.0%
!! GATAAGGACTTGTTAGCTTC+TGG + chr2_1:27822888-27822907 Msa0203640:intron 40.0%
TACCCCCTCTAATCATATCA+TGG + chr2_1:27823070-27823089 Msa0203640:intron 40.0%
CCACATGTTATAGTCATGTC+TGG - chr2_1:27823234-27823253 None:intergenic 40.0%
CCAGACATGACTATAACATG+TGG + chr2_1:27823231-27823250 Msa0203640:intron 40.0%
! ATTTAAGACGTGTCCGGTAT+TGG - chr2_1:27823286-27823305 None:intergenic 40.0%
GTAAGAGACTAGTACATGAG+TGG + chr2_1:27823324-27823343 Msa0203640:intron 40.0%
! TACATGAGTGGTCTTGCTTT+AGG + chr2_1:27823336-27823355 Msa0203640:intron 40.0%
! TGCATGCATGTTTTGTGACT+TGG + chr2_1:27823382-27823401 Msa0203640:intron 40.0%
! TTTTACAAAACGTGCGGCAT+GGG - chr2_1:27823825-27823844 None:intergenic 40.0%
! ATTTTACAAAACGTGCGGCA+TGG - chr2_1:27823826-27823845 None:intergenic 40.0%
ACTACTCGTCTTTGCTCTAT+AGG - chr2_1:27823914-27823933 None:intergenic 40.0%
AGTGGGATAAGCGAGATTAA+TGG + chr2_1:27824010-27824029 Msa0203640:CDS 40.0%
AAAAAAGCCTTGGTCAATGC+TGG + chr2_1:27824240-27824259 Msa0203640:CDS 40.0%
!! AGTAATTCCAGCATTGACCA+AGG - chr2_1:27824250-27824269 None:intergenic 40.0%
GTTAGTAATAAGCCACCTAG+GGG + chr2_1:27824469-27824488 Msa0203640:intron 40.0%
! CCGTGTCGGTATAATTACAA+TGG - chr2_1:27824745-27824764 None:intergenic 40.0%
TAAACATATCTCAGCCGTGT+CGG - chr2_1:27824759-27824778 None:intergenic 40.0%
TAGTTGTGATCAGGACAAGT+AGG + chr2_1:27824895-27824914 Msa0203640:intron 40.0%
TTTAGTCGTAGGTTTGCAAC+GGG + chr2_1:27824974-27824993 Msa0203640:intron 40.0%
! AAGCATTATGTTTGGAACGG+TGG - chr2_1:27825023-27825042 None:intergenic 40.0%
CAAATACAAACGCTGTCGTA+GGG - chr2_1:27825306-27825325 None:intergenic 40.0%
CCTACGTAGGATCTTGAAAA+CGG - chr2_1:27825349-27825368 None:intergenic 40.0%
TTCAAGATCCTACGTAGGAT+CGG + chr2_1:27825351-27825370 Msa0203640:intron 40.0%
TATTCGTATCAGATACGCGT+CGG + chr2_1:27825576-27825595 Msa0203640:intron 40.0%
!! AAAGCCTTATTGCACCATCT+TGG - chr2_1:27825689-27825708 None:intergenic 40.0%
AACCTGTTCAGCACAAACAA+CGG - chr2_1:27825757-27825776 None:intergenic 40.0%
AAAAACAAGGCACGCATCTA+TGG - chr2_1:27825935-27825954 None:intergenic 40.0%
TTGAAAATTGTAGGGGTGGA+TGG + chr2_1:27825986-27826005 Msa0203640:intron 40.0%
TGAAAATTGTAGGGGTGGAT+GGG + chr2_1:27825987-27826006 Msa0203640:intron 40.0%
CCAACAAGCAAATGATGAAG+TGG - chr2_1:27826107-27826126 None:intergenic 40.0%
CCACTTCATCATTTGCTTGT+TGG + chr2_1:27826104-27826123 Msa0203640:intron 40.0%
! TGGCTTGCATGAAGTTATCT+TGG + chr2_1:27826300-27826319 Msa0203640:intron 40.0%
! AACAATCTTGGTGTAGGCTT+GGG + chr2_1:27826343-27826362 Msa0203640:intron 40.0%
!! AACCGTGATGGATTTGTCAT+GGG + chr2_1:27826853-27826872 Msa0203640:CDS 40.0%
ATGGATTTGTCATGGGTGAA+GGG + chr2_1:27826860-27826879 Msa0203640:CDS 40.0%
AGAAGAGTTAGAGCATGCTA+AGG + chr2_1:27826900-27826919 Msa0203640:CDS 40.0%
ACCATATATGCAGAGTTCCT+CGG + chr2_1:27827219-27827238 Msa0203640:CDS 40.0%
! AACATTTTACCATCAGGACG+TGG - chr2_1:27827282-27827301 None:intergenic 40.0%
!! GTGGGTTTTGTGACAACTTA+CGG + chr2_1:27827356-27827375 Msa0203640:intron 40.0%
CTTACGGAGATTGTAGACTA+AGG + chr2_1:27827372-27827391 Msa0203640:intron 40.0%
AGGCTAAGACATGACTTCAT+TGG - chr2_1:27827773-27827792 None:intergenic 40.0%
GATACGTTCCCTTTATGTGT+TGG + chr2_1:27828334-27828353 Msa0203640:intron 40.0%
!! AGATGGTGGAAAATAGGCTT+AGG + chr2_1:27828575-27828594 Msa0203640:intron 40.0%
GAAAATAGGCTTAGGTGGTT+TGG + chr2_1:27828583-27828602 Msa0203640:intron 40.0%
AAATAGGCTTAGGTGGTTTG+GGG + chr2_1:27828585-27828604 Msa0203640:intron 40.0%
AGTAAGGAGAGTAGATCAGA+TGG + chr2_1:27828636-27828655 Msa0203640:intron 40.0%
AGTCAAATCACTATAGGCAG+AGG + chr2_1:27828664-27828683 Msa0203640:intron 40.0%
AATAAGGCTTGGCACTTGAA+AGG - chr2_1:27828848-27828867 None:intergenic 40.0%
TGGCTGTGCTTCATAAGAAT+GGG + chr2_1:27829030-27829049 Msa0203640:intron 40.0%
ATGGGAAAAAAAGGCCTGTT+TGG + chr2_1:27829048-27829067 Msa0203640:intron 40.0%
TTCGGTCAACCAAAAGAAAG+GGG - chr2_1:27829333-27829352 None:intergenic 40.0%
CTTCGGTCAACCAAAAGAAA+GGG - chr2_1:27829334-27829353 None:intergenic 40.0%
TCTTCGGTCAACCAAAAGAA+AGG - chr2_1:27829335-27829354 None:intergenic 40.0%
TGACACGATGCCATAAAACA+GGG - chr2_1:27829479-27829498 None:intergenic 40.0%
ATGACACGATGCCATAAAAC+AGG - chr2_1:27829480-27829499 None:intergenic 40.0%
! CTTTGTTGACTGTACTGTAC+TGG + chr2_1:27829976-27829995 Msa0203640:intron 40.0%
TCTCTATTCAACCACTACAG+GGG + chr2_1:27830097-27830116 Msa0203640:intron 40.0%
!!! TTGTTTTGGCCAAAATCCTG+AGG + chr2_1:27830250-27830269 Msa0203640:CDS 40.0%
TGTCACCTGTATAGTTGCAA+CGG - chr2_1:27830440-27830459 None:intergenic 40.0%
TGTAGGCAATAAAGACAGGA+TGG + chr2_1:27830550-27830569 Msa0203640:intron 40.0%
GTAGGCAATAAAGACAGGAT+GGG + chr2_1:27830551-27830570 Msa0203640:intron 40.0%
TATCATACCACTGCTTCATC+CGG - chr2_1:27830603-27830622 None:intergenic 40.0%
! TAATAAGTGACGGAGGTGAT+AGG - chr2_1:27830668-27830687 None:intergenic 40.0%
CGGGCATTAAGAAATGTTGT+TGG - chr2_1:27831050-27831069 None:intergenic 40.0%
AGACCGTCTTACAACAATCA+CGG - chr2_1:27831070-27831089 None:intergenic 40.0%
! GACGGTCTTATAAAAAGGGA+TGG + chr2_1:27831082-27831101 Msa0203640:intron 40.0%
! GGTCTTATAAAAAGGGATGG+AGG + chr2_1:27831085-27831104 Msa0203640:intron 40.0%
TGGCTTATCATGAGAGACAA+AGG + chr2_1:27831208-27831227 Msa0203640:intron 40.0%
GAAAGAGAGACTGGACATTA+AGG + chr2_1:27831318-27831337 Msa0203640:CDS 40.0%
GCAGGCTTGTCTAATTCATT+TGG + chr2_1:27831340-27831359 Msa0203640:CDS 40.0%
GATAAACTCGTAAGGCTGTT+CGG + chr2_1:27831553-27831572 Msa0203640:intron 40.0%
ATAAACTCGTAAGGCTGTTC+GGG + chr2_1:27831554-27831573 Msa0203640:intron 40.0%
AAGCTATCATGGAGAGACTA+TGG - chr2_1:27831633-27831652 None:intergenic 40.0%
!! CTGGAAGTTCTGAATCTAGA+GGG - chr2_1:27831947-27831966 None:intergenic 40.0%
!! TCTGGAAGTTCTGAATCTAG+AGG - chr2_1:27831948-27831967 None:intergenic 40.0%
CTGAAGATATGTGATAGCAG+TGG + chr2_1:27832285-27832304 Msa0203640:three_prime_UTR 40.0%
ACACAAAAAATCACCTCGGT+AGG - chr2_1:27832362-27832381 None:intergenic 40.0%
GAGGACACAAAAAATCACCT+CGG - chr2_1:27832366-27832385 None:intergenic 40.0%
GTGAGAGAAGAGAAGAGAAC+TGG - chr2_1:27821831-27821850 None:intergenic 45.0%
TGGGAGAAGAGAGATTAAGG+TGG - chr2_1:27822091-27822110 None:intergenic 45.0%
AGGATATTACCATGTCGACG+TGG - chr2_1:27822430-27822449 None:intergenic 45.0%
! TCACGTCGCGTGATTTTGTT+GGG + chr2_1:27822674-27822693 Msa0203640:intron 45.0%
! GTTGGGCTAGATATAACGTC+TGG + chr2_1:27822691-27822710 Msa0203640:intron 45.0%
ATGTGACCAACCATCTGTCT+AGG + chr2_1:27823257-27823276 Msa0203640:intron 45.0%
GTATTGGACACCTAGACAGA+TGG - chr2_1:27823270-27823289 None:intergenic 45.0%
TCTGTCTAGGTGTCCAATAC+CGG + chr2_1:27823270-27823289 Msa0203640:intron 45.0%
CAATGGCTAAGAATACGCCT+AGG - chr2_1:27823535-27823554 None:intergenic 45.0%
CTCCAAAGTTGTGCTCATGT+TGG + chr2_1:27823736-27823755 Msa0203640:intron 45.0%
CTCCAACATGAGCACAACTT+TGG - chr2_1:27823741-27823760 None:intergenic 45.0%
CAAAGTTGTGCTCATGTTGG+AGG + chr2_1:27823739-27823758 Msa0203640:intron 45.0%
ACTCGTCTTTGCTCTATAGG+AGG - chr2_1:27823911-27823930 None:intergenic 45.0%
GCAAAGACGAGTAGTTGTGA+CGG + chr2_1:27823919-27823938 Msa0203640:CDS 45.0%
CAAAGACGAGTAGTTGTGAC+GGG + chr2_1:27823920-27823939 Msa0203640:CDS 45.0%
ACATCTGGATCATGACCAAG+TGG - chr2_1:27823962-27823981 None:intergenic 45.0%
TCTGTTTCCAGAGGATTGCT+GGG + chr2_1:27824127-27824146 Msa0203640:intron 45.0%
ATGTTGTATCTGCTGACAGC+TGG + chr2_1:27824216-27824235 Msa0203640:CDS 45.0%
GACAGCTGGAAAAAAAGCCT+TGG + chr2_1:27824230-27824249 Msa0203640:CDS 45.0%
!!! TGTGGTGTTTTGATTGGCTC+CGG + chr2_1:27824303-27824322 Msa0203640:CDS 45.0%
!!! TGTTTTGATTGGCTCCGGAA+TGG + chr2_1:27824308-27824327 Msa0203640:CDS 45.0%
!!! GTTTTGATTGGCTCCGGAAT+GGG + chr2_1:27824309-27824328 Msa0203640:CDS 45.0%
ATATAACTTCTGCCCCTAGG+TGG - chr2_1:27824484-27824503 None:intergenic 45.0%
CCAAGAAATCTGAGAGTCTC+GGG - chr2_1:27824718-27824737 None:intergenic 45.0%
CCCAAGAAATCTGAGAGTCT+CGG - chr2_1:27824719-27824738 None:intergenic 45.0%
CCGAGACTCTCAGATTTCTT+GGG + chr2_1:27824716-27824735 Msa0203640:intron 45.0%
AGTGCGTTTCGAAGTCCAAT+TGG + chr2_1:27824997-27825016 Msa0203640:intron 45.0%
TGTATCACTGCACAGAAGCA+TGG - chr2_1:27825149-27825168 None:intergenic 45.0%
TGGGATTGTAGATCACTCGT+TGG + chr2_1:27825223-27825242 Msa0203640:CDS 45.0%
GGGATTGTAGATCACTCGTT+GGG + chr2_1:27825224-27825243 Msa0203640:CDS 45.0%
GCAACGATCCTTGCTGAAAT+GGG + chr2_1:27825258-27825277 Msa0203640:CDS 45.0%
ATACTCTGCCCATTTCAGCA+AGG - chr2_1:27825269-27825288 None:intergenic 45.0%
GCAAATACAAACGCTGTCGT+AGG - chr2_1:27825307-27825326 None:intergenic 45.0%
!! CCGTTTTCAAGATCCTACGT+AGG + chr2_1:27825346-27825365 Msa0203640:intron 45.0%
TCAAGATCCTACGTAGGATC+GGG + chr2_1:27825352-27825371 Msa0203640:intron 45.0%
TGGGGGTGAAAAATCGTATC+CGG + chr2_1:27825375-27825394 Msa0203640:intron 45.0%
CTGTCAAATGCGATCCAAGA+TGG + chr2_1:27825672-27825691 Msa0203640:intron 45.0%
CGATCCAAGATGGTGCAATA+AGG + chr2_1:27825682-27825701 Msa0203640:intron 45.0%
TTCCGTTGTTTGTGCTGAAC+AGG + chr2_1:27825752-27825771 Msa0203640:intron 45.0%
AACCAGATCCATTGCAAGCA+TGG - chr2_1:27825868-27825887 None:intergenic 45.0%
ATTACTTGTAGCACACGCTG+TGG - chr2_1:27826030-27826049 None:intergenic 45.0%
CAAGCCTACACCAAGATTGT+TGG - chr2_1:27826344-27826363 None:intergenic 45.0%
! CAACAATCTTGGTGTAGGCT+TGG + chr2_1:27826342-27826361 Msa0203640:intron 45.0%
TACTAAAGCTTCACGCCCTT+GGG + chr2_1:27826411-27826430 Msa0203640:CDS 45.0%
ACGGTTCTGTGATATCACAC+AGG - chr2_1:27826839-27826858 None:intergenic 45.0%
GTGATATCACAGAACCGTGA+TGG + chr2_1:27826841-27826860 Msa0203640:intron 45.0%
!! GAACCGTGATGGATTTGTCA+TGG + chr2_1:27826852-27826871 Msa0203640:intron 45.0%
CACCCATGACAAATCCATCA+CGG - chr2_1:27826858-27826877 None:intergenic 45.0%
! GATGGATTTGTCATGGGTGA+AGG + chr2_1:27826859-27826878 Msa0203640:CDS 45.0%
TGGATTTGTCATGGGTGAAG+GGG + chr2_1:27826861-27826880 Msa0203640:CDS 45.0%
CGACAATGGATACATCACTG+TGG - chr2_1:27827062-27827081 None:intergenic 45.0%
ACCGAGGAACTCTGCATATA+TGG - chr2_1:27827223-27827242 None:intergenic 45.0%
ATATATGCAGAGTTCCTCGG+TGG + chr2_1:27827222-27827241 Msa0203640:CDS 45.0%
! TGTCTAAAATGTAGGGCAGC+AGG + chr2_1:27828173-27828192 Msa0203640:intron 45.0%
TGGTGGAAAATAGGCTTAGG+TGG + chr2_1:27828578-27828597 Msa0203640:intron 45.0%
AAGGAGAGTAGATCAGATGG+AGG + chr2_1:27828639-27828658 Msa0203640:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr2_1:27828804-27828823 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr2_1:27828805-27828824 None:intergenic 45.0%
! GTGTCATATGGTTTCGGTGT+TGG + chr2_1:27828974-27828993 Msa0203640:intron 45.0%
GTGGCTGTGCTTCATAAGAA+TGG + chr2_1:27829029-27829048 Msa0203640:intron 45.0%
TACTCCTTAAGATCTCCAGC+AGG - chr2_1:27830215-27830234 None:intergenic 45.0%
!! TGGAGATCTTAAGGAGTACC+AGG + chr2_1:27830217-27830236 Msa0203640:CDS 45.0%
ATCATACCACTGCTTCATCC+GGG - chr2_1:27830602-27830621 None:intergenic 45.0%
GTCTTACAATTAGGGACGGA+GGG - chr2_1:27830835-27830854 None:intergenic 45.0%
TGCCCGTGATTGTTGTAAGA+CGG + chr2_1:27831064-27831083 Msa0203640:intron 45.0%
GACCGTCTTACAACAATCAC+GGG - chr2_1:27831069-27831088 None:intergenic 45.0%
CTTTGATCCCACAAGCACAT+TGG - chr2_1:27831299-27831318 None:intergenic 45.0%
GGGATCAAAGAAAGAGAGAC+TGG + chr2_1:27831309-27831328 Msa0203640:CDS 45.0%
TGCAAATGCTACACATTGCC+TGG - chr2_1:27831832-27831851 None:intergenic 45.0%
GAGTGAAAACGCCTGTGTTA+TGG + chr2_1:27831874-27831893 Msa0203640:three_prime_UTR 45.0%
! GGGACAACTCATCAGTGTTT+TGG - chr2_1:27831927-27831946 None:intergenic 45.0%
!! CAGGAGCATCAAACAATCTC+TGG - chr2_1:27831966-27831985 None:intergenic 45.0%
CAGAGATTGTTTGATGCTCC+TGG + chr2_1:27831964-27831983 Msa0203640:three_prime_UTR 45.0%
TCAATCACTTGATGGGGACA+TGG + chr2_1:27832082-27832101 Msa0203640:three_prime_UTR 45.0%
! TGTCTTTTGCTACGTGCAAC+TGG + chr2_1:27832239-27832258 Msa0203640:three_prime_UTR 45.0%
CCTCGGTAGGTTTCAAATGT+TGG - chr2_1:27832349-27832368 None:intergenic 45.0%
! CCAACATTTGAAACCTACCG+AGG + chr2_1:27832346-27832365 Msa0203640:three_prime_UTR 45.0%
!! TATAAATTTAAATATGATTA+TGG - chr2_1:27822809-27822828 None:intergenic 5.0%
CCAGAACGGGACATTCGATT+GGG - chr2_1:27822110-27822129 None:intergenic 50.0%
ACCAGAACGGGACATTCGAT+TGG - chr2_1:27822111-27822130 None:intergenic 50.0%
! ACGCCTTTGATCAGAGGTGT+CGG + chr2_1:27822502-27822521 Msa0203640:intron 50.0%
! GTCACGTCGCGTGATTTTGT+TGG + chr2_1:27822673-27822692 Msa0203640:intron 50.0%
TGGACACCTAGACAGATGGT+TGG - chr2_1:27823266-27823285 None:intergenic 50.0%
!! ACGAGTAGTTGTGACGGGTA+TGG + chr2_1:27823925-27823944 Msa0203640:CDS 50.0%
!! CGAGTAGTTGTGACGGGTAT+GGG + chr2_1:27823926-27823945 Msa0203640:CDS 50.0%
CTCTGTTTCCAGAGGATTGC+TGG + chr2_1:27824126-27824145 Msa0203640:intron 50.0%
CTGTTTCCAGAGGATTGCTG+GGG + chr2_1:27824128-27824147 Msa0203640:intron 50.0%
TACCTGCATTCCACCCATTC+CGG - chr2_1:27824325-27824344 None:intergenic 50.0%
CCCGAGACTCTCAGATTTCT+TGG + chr2_1:27824715-27824734 Msa0203640:intron 50.0%
! TGTTTGGAACGGTGGCCAAT+TGG - chr2_1:27825015-27825034 None:intergenic 50.0%
TATGAGCCAGCTCAGGATCT+AGG - chr2_1:27825101-27825120 None:intergenic 50.0%
TACGATCTATGAGCCAGCTC+AGG - chr2_1:27825108-27825127 None:intergenic 50.0%
! ACTGCACAGAAGCATGGTTG+TGG - chr2_1:27825143-27825162 None:intergenic 50.0%
TTCTGTGCAGTGATACAGCC+AGG + chr2_1:27825152-27825171 Msa0203640:CDS 50.0%
AAGGATCGTTGCCAAACGGT+TGG - chr2_1:27825250-27825269 None:intergenic 50.0%
CAGCAAGGATCGTTGCCAAA+CGG - chr2_1:27825254-27825273 None:intergenic 50.0%
GGCAACGATCCTTGCTGAAA+TGG + chr2_1:27825257-27825276 Msa0203640:CDS 50.0%
TGTCGTAGGGAAGAGGAAGA+AGG - chr2_1:27825293-27825312 None:intergenic 50.0%
CTTGAAAACGGAGTCGCTGT+TGG - chr2_1:27825337-27825356 None:intergenic 50.0%
TGCCATGCTTGCAATGGATC+TGG + chr2_1:27825863-27825882 Msa0203640:CDS 50.0%
! CAAAGCATCACGTCCTGCAA+AGG - chr2_1:27826223-27826242 None:intergenic 50.0%
TTGCAGGACGTGATGCTTTG+TGG + chr2_1:27826223-27826242 Msa0203640:intron 50.0%
! AATCTTGGTGTAGGCTTGGG+TGG + chr2_1:27826346-27826365 Msa0203640:intron 50.0%
! CAAGGGCGTGAAGCTTTAGT+AGG - chr2_1:27826412-27826431 None:intergenic 50.0%
CTACTAAAGCTTCACGCCCT+TGG + chr2_1:27826410-27826429 Msa0203640:CDS 50.0%
GGGAAGGAACTATAAGACCC+AGG - chr2_1:27827725-27827744 None:intergenic 50.0%
AGTTCCTTCCCCCAAGTCTA+AGG + chr2_1:27827734-27827753 Msa0203640:intron 50.0%
TCAAGTGAAGCGCGAGAAGT+GGG - chr2_1:27828316-27828335 None:intergenic 50.0%
ATCAAGTGAAGCGCGAGAAG+TGG - chr2_1:27828317-27828336 None:intergenic 50.0%
ACTAAGTGGGGTCAGCTACA+TGG - chr2_1:27828792-27828811 None:intergenic 50.0%
ATGTAGCTGACCCCACTTAG+TGG + chr2_1:27828791-27828810 Msa0203640:intron 50.0%
TGTAGCTGACCCCACTTAGT+GGG + chr2_1:27828792-27828811 Msa0203640:intron 50.0%
TGACCCCACTTAGTGGGATA+AGG + chr2_1:27828798-27828817 Msa0203640:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr2_1:27828806-27828825 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr2_1:27828803-27828822 Msa0203640:intron 50.0%
TGGCTATGTGTCCTAGTGCT+TGG + chr2_1:27828876-27828895 Msa0203640:intron 50.0%
ACCAGTGCCTTCATTGTGCT+GGG + chr2_1:27829130-27829149 Msa0203640:intron 50.0%
TTCATTGTGCTGGGGTGTGA+GGG + chr2_1:27829139-27829158 Msa0203640:intron 50.0%
TATTCAACCACTACAGGGGC+TGG + chr2_1:27830101-27830120 Msa0203640:intron 50.0%
AATAACACCAGCCCCTGTAG+TGG - chr2_1:27830111-27830130 None:intergenic 50.0%
CTTAAGATCTCCAGCAGGTG+TGG - chr2_1:27830210-27830229 None:intergenic 50.0%
CACACCTGCTGGAGATCTTA+AGG + chr2_1:27830208-27830227 Msa0203640:CDS 50.0%
GGAAGCCGTTGCAACTATAC+AGG + chr2_1:27830432-27830451 Msa0203640:CDS 50.0%
AGAAAACCCGGATGAAGCAG+TGG + chr2_1:27830593-27830612 Msa0203640:CDS 50.0%
GGTCTTACAATTAGGGACGG+AGG - chr2_1:27830836-27830855 None:intergenic 50.0%
CAGGACACCAATGTGCTTGT+GGG + chr2_1:27831289-27831308 Msa0203640:intron 50.0%
GAGAGACTGGACATTAAGGC+AGG + chr2_1:27831322-27831341 Msa0203640:CDS 50.0%
! CTTGCAGTTGCTGACTAACC+AGG + chr2_1:27831811-27831830 Msa0203640:intron 50.0%
TTACCTCTCCTCTCTGCACG+TGG + chr2_1:27821985-27822004 Msa0203640:CDS 55.0%
CCCAATCGAATGTCCCGTTC+TGG + chr2_1:27822107-27822126 Msa0203640:CDS 55.0%
! CCTCTGATCAAAGGCGTGTC+TGG - chr2_1:27822499-27822518 None:intergenic 55.0%
CCAGACACGCCTTTGATCAG+AGG + chr2_1:27822496-27822515 Msa0203640:intron 55.0%
! GCACCGACACCTCTGATCAA+AGG - chr2_1:27822508-27822527 None:intergenic 55.0%
!! AGTTGTGACGGGTATGGGTG+TGG + chr2_1:27823931-27823950 Msa0203640:CDS 55.0%
ATGGGTGTGGTCACACCACT+TGG + chr2_1:27823944-27823963 Msa0203640:CDS 55.0%
TGATCTCCCCAGCAATCCTC+TGG - chr2_1:27824137-27824156 None:intergenic 55.0%
! TTGATTGGCTCCGGAATGGG+TGG + chr2_1:27824312-27824331 Msa0203640:CDS 55.0%
CTGTAGCCTAGATCCTGAGC+TGG + chr2_1:27825092-27825111 Msa0203640:intron 55.0%
AGTGATACAGCCAGGACTGC+TGG + chr2_1:27825160-27825179 Msa0203640:CDS 55.0%
GAACTGGCGTCGTGAGTTTG+AGG + chr2_1:27825200-27825219 Msa0203640:CDS 55.0%
! TGGCGTCGTGAGTTTGAGGT+GGG + chr2_1:27825204-27825223 Msa0203640:CDS 55.0%
CAAACGCTGTCGTAGGGAAG+AGG - chr2_1:27825300-27825319 None:intergenic 55.0%
GAAAACGGAGTCGCTGTTGG+TGG - chr2_1:27825334-27825353 None:intergenic 55.0%
AGATCCTACGTAGGATCGGG+TGG + chr2_1:27825355-27825374 Msa0203640:intron 55.0%
GATCCTACGTAGGATCGGGT+GGG + chr2_1:27825356-27825375 Msa0203640:intron 55.0%
ATCCTACGTAGGATCGGGTG+GGG + chr2_1:27825357-27825376 Msa0203640:intron 55.0%
GGGTTCTGCCATGCTTGCAA+TGG + chr2_1:27825857-27825876 Msa0203640:CDS 55.0%
CAGGACGTGATGCTTTGTGG+TGG + chr2_1:27826226-27826245 Msa0203640:intron 55.0%
!! TGGGTGGCTTTGTAGCATGC+AGG + chr2_1:27826362-27826381 Msa0203640:CDS 55.0%
!! GGGTGGCTTTGTAGCATGCA+GGG + chr2_1:27826363-27826382 Msa0203640:CDS 55.0%
TTTGTCATGGGTGAAGGGGC+TGG + chr2_1:27826865-27826884 Msa0203640:CDS 55.0%
CACATGTGAAGCTTCCACCG+AGG - chr2_1:27827239-27827258 None:intergenic 55.0%
!! TCCTCCTGGCCTTAGACTTG+GGG - chr2_1:27827746-27827765 None:intergenic 55.0%
!! CTCCTCCTGGCCTTAGACTT+GGG - chr2_1:27827747-27827766 None:intergenic 55.0%
! CAAGTCTAAGGCCAGGAGGA+GGG + chr2_1:27827746-27827765 Msa0203640:intron 55.0%
ACTTCATTGGTCCCTCCTCC+TGG - chr2_1:27827760-27827779 None:intergenic 55.0%
!! GGTCGGTGTCATTCTTTCGC+AGG - chr2_1:27827793-27827812 None:intergenic 55.0%
TTAGACGCACGCCAAGCACT+AGG - chr2_1:27828890-27828909 None:intergenic 55.0%
!! ACAATGAAGGCACTGGTGGC+GGG - chr2_1:27829127-27829146 None:intergenic 55.0%
!! CACAATGAAGGCACTGGTGG+CGG - chr2_1:27829128-27829147 None:intergenic 55.0%
!! CAGCACAATGAAGGCACTGG+TGG - chr2_1:27829131-27829150 None:intergenic 55.0%
CACCAGTGCCTTCATTGTGC+TGG + chr2_1:27829129-27829148 Msa0203640:intron 55.0%
CCAGTGCCTTCATTGTGCTG+GGG + chr2_1:27829131-27829150 Msa0203640:intron 55.0%
CTCACACCCCAGCACAATGA+AGG - chr2_1:27829140-27829159 None:intergenic 55.0%
CTTCATTGTGCTGGGGTGTG+AGG + chr2_1:27829138-27829157 Msa0203640:intron 55.0%
TCATTGTGCTGGGGTGTGAG+GGG + chr2_1:27829140-27829159 Msa0203640:intron 55.0%
ATCTCCAGCAGGTGTGGATG+TGG - chr2_1:27830204-27830223 None:intergenic 55.0%
GGTCATCTACTAGGAGCAGC+TGG + chr2_1:27830403-27830422 Msa0203640:CDS 55.0%
CATCTACTAGGAGCAGCTGG+TGG + chr2_1:27830406-27830425 Msa0203640:CDS 55.0%
! CCACAAGCACATTGGTGTCC+TGG - chr2_1:27831291-27831310 None:intergenic 55.0%
CCAGGACACCAATGTGCTTG+TGG + chr2_1:27831288-27831307 Msa0203640:intron 55.0%
AAGCCACGTGCAGAGAGGAG+AGG - chr2_1:27821991-27822010 None:intergenic 60.0%
GCAACAAGCCACGTGCAGAG+AGG - chr2_1:27821996-27822015 None:intergenic 60.0%
ATCGTTCTCGTCGTCGCAGC+AGG + chr2_1:27822060-27822079 Msa0203640:CDS 60.0%
! CGACGTGTCAGTGTCGAGTC+TGG - chr2_1:27822406-27822425 None:intergenic 60.0%
ACACGTCGACCACGTCGACA+TGG + chr2_1:27822418-27822437 Msa0203640:intron 60.0%
CTCCGGAATGGGTGGAATGC+AGG + chr2_1:27824320-27824339 Msa0203640:CDS 60.0%
GATACAGCCAGGACTGCTGG+AGG + chr2_1:27825163-27825182 Msa0203640:CDS 60.0%
TTGCACACCTCCAGCAGTCC+TGG - chr2_1:27825173-27825192 None:intergenic 60.0%
! ACTGCTGGAGGTGTGCAACG+TGG + chr2_1:27825175-27825194 Msa0203640:CDS 60.0%
GGTGTGCAACGTGGTCGAAC+TGG + chr2_1:27825184-27825203 Msa0203640:CDS 60.0%
CTGGCGTCGTGAGTTTGAGG+TGG + chr2_1:27825203-27825222 Msa0203640:CDS 60.0%
CACTCGTTGGGCCAACCGTT+TGG + chr2_1:27825236-27825255 Msa0203640:CDS 60.0%
TCCTACGTAGGATCGGGTGG+GGG + chr2_1:27825358-27825377 Msa0203640:intron 60.0%
GTGACTGAGCCACGTCCTGA+TGG + chr2_1:27827270-27827289 Msa0203640:CDS 60.0%
!! CTGGCCTTAGACTTGGGGGA+AGG - chr2_1:27827741-27827760 None:intergenic 60.0%
! CTTCCCCCAAGTCTAAGGCC+AGG + chr2_1:27827739-27827758 Msa0203640:intron 60.0%
!! CCTCCTGGCCTTAGACTTGG+GGG - chr2_1:27827745-27827764 None:intergenic 60.0%
!! CCTCCTCCTGGCCTTAGACT+TGG - chr2_1:27827748-27827767 None:intergenic 60.0%
! CCAAGTCTAAGGCCAGGAGG+AGG + chr2_1:27827745-27827764 Msa0203640:intron 60.0%
TGAAGCGCGAGAAGTGGGAG+AGG - chr2_1:27828311-27828330 None:intergenic 60.0%
! CCCCAGCACAATGAAGGCAC+TGG - chr2_1:27829134-27829153 None:intergenic 60.0%
CATTGTGCTGGGGTGTGAGG+GGG + chr2_1:27829141-27829160 Msa0203640:intron 60.0%
CATGCCACATCCACACCTGC+TGG + chr2_1:27830197-27830216 Msa0203640:CDS 60.0%
! ACTAGGAGCAGCTGGTGGTG+TGG + chr2_1:27830411-27830430 Msa0203640:CDS 60.0%
ACCCCCACCCGATCCTACGT+AGG - chr2_1:27825362-27825381 None:intergenic 65.0%
! CCCCCAAGTCTAAGGCCAGG+AGG + chr2_1:27827742-27827761 Msa0203640:intron 65.0%
TGTGCTGGGGTGTGAGGGGG+TGG + chr2_1:27829144-27829163 Msa0203640:intron 70.0%
GTGCTGGGGTGTGAGGGGGT+GGG + chr2_1:27829145-27829164 Msa0203640:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 27821783 27832437 27821783 ID=Msa0203640;Name=Msa0203640
chr2_1 mRNA 27821783 27832437 27821783 ID=Msa0203640-mRNA-1;Parent=Msa0203640;Name=Msa0203640-mRNA-1;_AED=0.19;_eAED=0.19;_QI=189|0.85|0.93|0.93|0.92|0.86|15|666|575
chr2_1 exon 27821783 27822128 27821783 ID=Msa0203640-mRNA-1:exon:10205;Parent=Msa0203640-mRNA-1
chr2_1 exon 27823852 27824057 27823852 ID=Msa0203640-mRNA-1:exon:10206;Parent=Msa0203640-mRNA-1
chr2_1 exon 27824138 27824341 27824138 ID=Msa0203640-mRNA-1:exon:10207;Parent=Msa0203640-mRNA-1
chr2_1 exon 27825103 27825363 27825103 ID=Msa0203640-mRNA-1:exon:10208;Parent=Msa0203640-mRNA-1
chr2_1 exon 27825774 27825884 27825774 ID=Msa0203640-mRNA-1:exon:10209;Parent=Msa0203640-mRNA-1
chr2_1 exon 27825999 27826094 27825999 ID=Msa0203640-mRNA-1:exon:10210;Parent=Msa0203640-mRNA-1
chr2_1 exon 27826229 27826274 27826229 ID=Msa0203640-mRNA-1:exon:10211;Parent=Msa0203640-mRNA-1
chr2_1 exon 27826359 27826438 27826359 ID=Msa0203640-mRNA-1:exon:10212;Parent=Msa0203640-mRNA-1
chr2_1 exon 27826853 27826921 27826853 ID=Msa0203640-mRNA-1:exon:10213;Parent=Msa0203640-mRNA-1
chr2_1 exon 27827207 27827291 27827207 ID=Msa0203640-mRNA-1:exon:10214;Parent=Msa0203640-mRNA-1
chr2_1 exon 27830117 27830271 27830117 ID=Msa0203640-mRNA-1:exon:10215;Parent=Msa0203640-mRNA-1
chr2_1 exon 27830373 27830453 27830373 ID=Msa0203640-mRNA-1:exon:10216;Parent=Msa0203640-mRNA-1
chr2_1 exon 27830555 27830614 27830555 ID=Msa0203640-mRNA-1:exon:10217;Parent=Msa0203640-mRNA-1
chr2_1 exon 27831292 27831454 27831292 ID=Msa0203640-mRNA-1:exon:10218;Parent=Msa0203640-mRNA-1
chr2_1 exon 27831818 27832437 27831818 ID=Msa0203640-mRNA-1:exon:10219;Parent=Msa0203640-mRNA-1
chr2_1 five_prime_UTR 27821783 27821971 27821783 ID=Msa0203640-mRNA-1:five_prime_utr;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27821972 27822128 27821972 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27823852 27824057 27823852 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27824138 27824341 27824138 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27825103 27825363 27825103 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27825774 27825884 27825774 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27825999 27826094 27825999 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27826229 27826274 27826229 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27826359 27826438 27826359 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27826853 27826921 27826853 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27827207 27827291 27827207 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27830117 27830271 27830117 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27830373 27830453 27830373 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27830555 27830614 27830555 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 CDS 27831292 27831408 27831292 ID=Msa0203640-mRNA-1:cds;Parent=Msa0203640-mRNA-1
chr2_1 three_prime_UTR 27831409 27831454 27831409 ID=Msa0203640-mRNA-1:three_prime_utr;Parent=Msa0203640-mRNA-1
chr2_1 three_prime_UTR 27831818 27832437 27831818 ID=Msa0203640-mRNA-1:three_prime_utr;Parent=Msa0203640-mRNA-1
Gene Sequence

>Msa0203640

ATGGCTTCTTCACTTACCTCTCCTCTCTGCACGTGGCTTGTTGCTGCTTGCATGTCAGTCACGTGTGACTCTCACTCTTCTCAATCTCATCGTTCTCGTCGTCGCAGCAGGAACAACCACCTTAATCTCTCTTCTCCCAATCGAATGTCCCGTTCTGGTAAAGTAATGGCTGTAGCTTTGGATTCTGCTCAAGAAGTTACAACAACGAAAAAACCTCCTATAGAGCAAAGACGAGTAGTTGTGACGGGTATGGGTGTGGTCACACCACTTGGTCATGATCCAGATGTCTTCTACAATAATCTACTTGATGGTGTTAGTGGGATAAGCGAGATTAATGGTTTTGATTGTGCACAATATCCAACGAGGATTGCTGGGGAGATCAAATCTTTCTCAACTGATGGCTTTGTAGCACCAAAGTTTTCAAAGAGGATGGATAAATTTATGTTGTATCTGCTGACAGCTGGAAAAAAAGCCTTGGTCAATGCTGGAATTACTGAAGAAGTAATGGATGAGTTAGATAAAACAAAATGTGGTGTTTTGATTGGCTCCGGAATGGGTGGAATGCAGATCCTGAGCTGGCTCATAGATCGTACGATTCTACTATCCACAACCATGCTTCTGTGCAGTGATACAGCCAGGACTGCTGGAGGTGTGCAACGTGGTCGAACTGGCGTCGTGAGTTTGAGGTGGGATTGTAGATCACTCGTTGGGCCAACCGTTTGGCAACGATCCTTGCTGAAATGGGCAGAGTATTCCTTCTTCCTCTTCCCTACGACAGCGTTTGTATTTGCGCTGCCACCAACAGCGACTCCGTTTTCAAGATCCTACGTTTTTCATGATGCCATTGAAGCTTTACGAATCTCATATAAGAAGATGAATCCTTTTTGTGTACCATTTGCAACAACAAATATGGGTTCTGCCATGCTTGCAATGGATCTGGGGTGGATGGGCCCAAACTATTCAATATCCACAGCGTGTGCTACAAGTAATTTTTGTATATTGAATGCTGCAAACCATATAATTAAAGGTGAAGCTGACGTGATGCTTTGTGGTGGCTCAGATGCTGCTATAATACCAATTGGCTTGGGTGGCTTTGTAGCATGCAGGGCCCTCTCACAAAGAAATAATGATCCTACTAAAGCTTCACGCCCTTGGGATATTAACCGTGATGGATTTGTCATGGGTGAAGGGGCTGGAGTTTTGCTTTTAGAAGAGTTAGAGCATGCTAAGAAAAGGGGAGCAACCATATATGCAGAGTTCCTCGGTGGAAGCTTCACATGTGATGCTTATCATGTGACTGAGCCACGTCCTGATGGGGCTGGTGTTATTCTTTGCATTGAAAAGGCATTAGCTAATTCTGGAGTTTCAAAGGAGGACGTGAACTACATAAATGCACATGCCACATCCACACCTGCTGGAGATCTTAAGGAGTACCAGGCTTTGATTCATTGTTTTGGCCAAAATCCTGAGCTAAAAGTGAATTCGACGAAGTCTATGATTGGTCATCTACTAGGAGCAGCTGGTGGTGTGGAAGCCGTTGCAACTATACAGGCAATAAAGACAGGATGGGTTCATCCTAATATCAATCTAGAAAACCCGGATGAAGCAGTGGACACCAATGTGCTTGTGGGATCAAAGAAAGAGAGACTGGACATTAAGGCAGGCTTGTCTAATTCATTTGGTTTTGGTGGCCACAATTCTTCAATCATTTTTGCCCCTTTTAAGTGA
Protein sequence

>Msa0203640

MASSLTSPLCTWLVAACMSVTCDSHSSQSHRSRRRSRNNHLNLSSPNRMSRSGKVMAVALDSAQEVTTTKKPPIEQRRVVVTGMGVVTPLGHDPDVFYNNLLDGVSGISEINGFDCAQYPTRIAGEIKSFSTDGFVAPKFSKRMDKFMLYLLTAGKKALVNAGITEEVMDELDKTKCGVLIGSGMGGMQILSWLIDRTILLSTTMLLCSDTARTAGGVQRGRTGVVSLRWDCRSLVGPTVWQRSLLKWAEYSFFLFPTTAFVFALPPTATPFSRSYVFHDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIKGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHVTEPRPDGAGVILCIEKALANSGVSKEDVNYINAHATSTPAGDLKEYQALIHCFGQNPELKVNSTKSMIGHLLGAAGGVEAVATIQAIKTGWVHPNINLENPDEAVDTNVLVGSKKERLDIKAGLSNSFGFGGHNSSIIFAPFK*