AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0516310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0516310 MtrunA17_Chr3g0126871 94.836 581 23 3 3 577 2 581 0.0 982
Msa0516310 MtrunA17_Chr6g0476731 73.721 430 101 5 156 577 297 722 0.0 570
Msa0516310 MtrunA17_Chr4g0076871 55.952 84 29 2 260 338 1 81 3.41e-18 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0516310 AT5G53350.1 64.322 597 170 11 5 577 2 579 0.0 679
Msa0516310 AT1G33360.1 73.039 408 96 4 156 556 240 640 0.0 580
Msa0516310 AT5G49840.1 63.793 406 132 7 165 558 197 599 2.14e-167 489
Msa0516310 AT5G49840.3 63.547 406 133 7 165 558 197 599 1.21e-166 488
Msa0516310 AT5G49840.2 64.736 397 125 7 165 549 197 590 2.90e-166 486
Msa0516310 AT5G49840.4 65.234 256 76 5 165 410 197 449 1.07e-100 313

Find 196 sgRNAs with CRISPR-Local

Find 452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAACTTACTCCATTAATT+TGG 0.181501 3_4:+67803168 None:intergenic
CCTGGGAATTATGATGTTTC+TGG 0.189953 3_4:-67806767 Msa0516310:CDS
GTCACCTCTCGGATGCTTTC+GGG 0.194782 3_4:+67804350 None:intergenic
CTTATTCATTGATGTAGTTT+TGG 0.203238 3_4:-67801437 Msa0516310:three_prime_UTR
TTATAGACTACGGAGGTTTC+TGG 0.225714 3_4:-67801747 Msa0516310:intron
GTGTTGGGGTGGGTCTAATA+TGG 0.227398 3_4:-67806678 Msa0516310:CDS
GCAATTGCATCATCATTATT+AGG 0.235708 3_4:-67803800 Msa0516310:CDS
CTTATGATGTAACCGCTTAT+AGG 0.235987 3_4:-67806853 Msa0516310:CDS
AAGAAGACATTCCAAATTAA+TGG 0.238033 3_4:-67803179 Msa0516310:CDS
ATGCTTTCGGGCTCCCTTCT+CGG 0.243716 3_4:+67804362 None:intergenic
GGGCTTGATAAACATGTAAT+TGG 0.255789 3_4:-67806620 Msa0516310:CDS
CATTTGTTAAAATAATATAA+AGG 0.269185 3_4:-67801615 Msa0516310:three_prime_UTR
TGTCACCTCTCGGATGCTTT+CGG 0.272202 3_4:+67804349 None:intergenic
GCTGCTAGCTCCGGTGATTC+GGG 0.277221 3_4:-67806716 Msa0516310:CDS
CAACATTGCAGTTTCGAGTT+TGG 0.277238 3_4:-67807417 Msa0516310:five_prime_UTR
GGCAATAATAGAGAGTATTT+TGG 0.280673 3_4:-67802576 Msa0516310:CDS
TGCTGCTAGCTCCGGTGATT+CGG 0.290402 3_4:-67806717 Msa0516310:CDS
CACTTTATTTGATTCCTGTT+TGG 0.294237 3_4:-67801380 Msa0516310:three_prime_UTR
ACATCATAAGGAACATGATT+AGG 0.297555 3_4:+67806866 None:intergenic
GAAAAGCAATATTCTTCTAA+TGG 0.301012 3_4:-67806330 Msa0516310:CDS
AGGCGCCAAGATTCTTCTAT+TGG 0.301304 3_4:-67803875 Msa0516310:CDS
CAAGATTCTTCTATTGGATT+TGG 0.303237 3_4:-67803869 Msa0516310:CDS
ACTCTAACATTGCCCCTTGC+AGG 0.305379 3_4:-67805348 Msa0516310:CDS
TTATGATGTAACCGCTTATA+GGG 0.308651 3_4:-67806852 Msa0516310:CDS
ATACTGGTGCTCGGGGATTA+CGG 0.311273 3_4:-67802598 Msa0516310:CDS
CAAAACTACATCAATGAATA+AGG 0.311960 3_4:+67801438 None:intergenic
TACTGGTGCTCGGGGATTAC+GGG 0.313829 3_4:-67802597 Msa0516310:CDS
AAAAGCAATATTCTTCTAAT+GGG 0.315637 3_4:-67806329 Msa0516310:CDS
TGCTTCTCTAAAGCACTCTT+TGG 0.316210 3_4:+67803206 None:intergenic
AGACATCTCTACTGATATTA+AGG 0.319001 3_4:+67804622 None:intergenic
TGACTTAGAGAAAACAATTT+CGG 0.321284 3_4:-67803993 Msa0516310:CDS
CATCATAAGGAACATGATTA+GGG 0.324327 3_4:+67806867 None:intergenic
AGTTGACAAGATTACCAAAA+AGG 0.324638 3_4:-67804729 Msa0516310:intron
GAATCTATTATCTATGAATA+TGG 0.325665 3_4:+67807261 None:intergenic
TACAAACCTAGCCAAGGTTT+TGG 0.330534 3_4:+67805949 None:intergenic
GCAGATGAAAAGTATATTCT+TGG 0.340392 3_4:+67804030 None:intergenic
TGCTTTCGGGCTCCCTTCTC+GGG 0.340395 3_4:+67804363 None:intergenic
AACTGAAAATCAACTCATTC+AGG 0.341124 3_4:-67803586 Msa0516310:intron
TTGGAAGTGGAGGCAGTAGA+AGG 0.343348 3_4:+67806917 None:intergenic
GGAAACCGTCCAACAAATTC+AGG 0.345544 3_4:+67803633 None:intergenic
AGAGGCGCTAAAATCCTTTA+TGG 0.346107 3_4:-67801898 Msa0516310:CDS
GGTGGTGGAGGAGGTGGTAG+TGG 0.347419 3_4:-67806740 Msa0516310:CDS
ATTTGTTAAAATAATATAAA+GGG 0.350651 3_4:-67801614 Msa0516310:three_prime_UTR
TGCCACAGATAGCACCTTCT+TGG 0.354117 3_4:+67806586 None:intergenic
GATGTTTCTGGTGGTGGTGG+TGG 0.354213 3_4:-67806755 Msa0516310:CDS
TTGTTGATCCTCCTGAAGTT+TGG 0.355689 3_4:-67806814 Msa0516310:CDS
AGCCCTTTACAAATCTCCTT+TGG 0.374826 3_4:+67806638 None:intergenic
GGTGGTGGTGGTGGAGGAGG+TGG 0.375394 3_4:-67806746 Msa0516310:CDS
TAGTATTACTACTACCCTTA+TGG 0.379971 3_4:+67806942 None:intergenic
CGAATGCACCCCTGCCATAA+AGG 0.380658 3_4:+67801884 None:intergenic
GAGAATCGAGTTTGCGGTTG+CGG 0.383656 3_4:+67807301 None:intergenic
AGCAGTGATCTTATAGCATA+TGG 0.387190 3_4:-67803663 Msa0516310:CDS
TAGAAAACGTATGCGACATT+TGG 0.388438 3_4:+67801473 None:intergenic
TGAAGGAAGTGAAGTGATAA+GGG 0.393456 3_4:+67806996 None:intergenic
TCCGAGAGGTGACAATATTC+AGG 0.396522 3_4:-67804340 Msa0516310:intron
CTCCGACCCGTTCTTCTCCT+TGG 0.403332 3_4:+67801849 None:intergenic
TGTTGGGGTGGGTCTAATAT+GGG 0.407701 3_4:-67806677 Msa0516310:CDS
GGTTTAATACCTGAATTTGT+TGG 0.411841 3_4:-67803642 Msa0516310:CDS
AATTATGATGTTTCTGGTGG+TGG 0.418857 3_4:-67806761 Msa0516310:CDS
CGTCAAATGTCCGAGGAGAT+TGG 0.422052 3_4:+67801343 None:intergenic
AGTTTCATAATTACAAATCA+TGG 0.422294 3_4:-67801505 Msa0516310:three_prime_UTR
CTCCAAAGGAGATTTGTAAA+GGG 0.427231 3_4:-67806640 Msa0516310:CDS
AGAATCGAGTTTGCGGTTGC+GGG 0.429240 3_4:+67807302 None:intergenic
CGAGTTTGCGGTTGCGGGAA+GGG 0.430292 3_4:+67807307 None:intergenic
ATCTTTCCAAGGAGAAGAAC+GGG 0.431717 3_4:-67801855 Msa0516310:CDS
ATCGTCGCCTGTTCTGATAT+CGG 0.433596 3_4:+67801975 None:intergenic
GGAGGTTTCTGGTGGTGATC+AGG 0.433681 3_4:-67801736 Msa0516310:CDS
GCCTTCATCTTTGCACGTAC+AGG 0.436134 3_4:+67803842 None:intergenic
GATCCTCCTGAAGTTTGGTC+TGG 0.439271 3_4:-67806809 Msa0516310:CDS
ATTCGGGGAATTCGAAAGAT+TGG 0.439295 3_4:-67806700 Msa0516310:CDS
ATTCTTCTAATGGGGCCAAC+AGG 0.443100 3_4:-67806320 Msa0516310:CDS
CAAATCCAATAGAAGAATCT+TGG 0.444097 3_4:+67803870 None:intergenic
TTGAAGGAAGTGAAGTGATA+AGG 0.445450 3_4:+67806995 None:intergenic
CTAATGGGGCCAACAGGATC+AGG 0.446453 3_4:-67806314 Msa0516310:intron
ATCTGGAATGTTAGGCATGC+AGG 0.446474 3_4:-67806413 Msa0516310:intron
TATGATGTTTCTGGTGGTGG+TGG 0.449788 3_4:-67806758 Msa0516310:CDS
GGTGGAATTGTTGTTCGTCC+TGG 0.450696 3_4:-67806785 Msa0516310:CDS
CCACCACCAGACCAAACTTC+AGG 0.451100 3_4:+67806803 None:intergenic
CGGCGGCGATTTCATCCATA+AGG 0.452075 3_4:-67806957 Msa0516310:CDS
TGATAAGGGGTGTTGATTAA+CGG 0.452244 3_4:+67807010 None:intergenic
GCTGACAGACTAACAAGAAT+AGG 0.452850 3_4:+67803612 None:intergenic
TATTCTGAGAATCGAGTTTG+CGG 0.460423 3_4:+67807295 None:intergenic
CTATAAGCGGTTACATCATA+AGG 0.461499 3_4:+67806854 None:intergenic
CCTGAAGTTTGGTCTGGTGG+TGG 0.461621 3_4:-67806803 Msa0516310:CDS
GAATTCGAAAGATTGGTGTT+GGG 0.463989 3_4:-67806693 Msa0516310:CDS
TCGTCGCCTGTTCTGATATC+GGG 0.476838 3_4:+67801976 None:intergenic
AATCGCCGCCGCGGAGAGAA+AGG 0.479064 3_4:+67806969 None:intergenic
CTCTGGTGAAGGTGTTCAGC+AGG 0.479327 3_4:-67804601 Msa0516310:CDS
TTCGACAAGGGTGTTGGAAG+TGG 0.479331 3_4:+67806904 None:intergenic
TTTCGAATTCCCCGAATCAC+CGG 0.480367 3_4:+67806706 None:intergenic
GCGGAGAGAAAGGGGTTTGA+AGG 0.485780 3_4:+67806979 None:intergenic
GTGGAATTGTTGTTCGTCCT+GGG 0.494095 3_4:-67806784 Msa0516310:CDS
TTACAAATCTCCTTTGGAGT+AGG 0.495128 3_4:+67806644 None:intergenic
GCGCTAAAATCCTTTATGGC+AGG 0.497392 3_4:-67801894 Msa0516310:CDS
GGTAGTGGTGCTGCTAGCTC+CGG 0.497882 3_4:-67806725 Msa0516310:CDS
CAGATACCCGATATCAGAAC+AGG 0.498210 3_4:-67801982 Msa0516310:CDS
ACATGTAATTGGACAAGAAA+GGG 0.498664 3_4:-67806609 Msa0516310:CDS
ACTGAAGATGCTTGAGGGAA+CGG 0.498830 3_4:-67804574 Msa0516310:intron
GGAATTCGAAAGATTGGTGT+TGG 0.500869 3_4:-67806694 Msa0516310:CDS
CGAAAGATTGGTGTTGGGGT+GGG 0.509067 3_4:-67806688 Msa0516310:CDS
AATCAATTAATTCAACCCTA+TGG 0.509958 3_4:-67807158 Msa0516310:exon
ATCGCCGCCGCGGAGAGAAA+GGG 0.513488 3_4:+67806970 None:intergenic
ACTCCAAAGGAGATTTGTAA+AGG 0.517462 3_4:-67806641 Msa0516310:CDS
CGCTAAAATCCTTTATGGCA+GGG 0.517917 3_4:-67801893 Msa0516310:CDS
TTTGGTAGATGCCATGTATG+AGG 0.520683 3_4:-67802558 Msa0516310:intron
AGAGTCTTCGACAAGGGTGT+TGG 0.521311 3_4:+67806898 None:intergenic
GACATTACTTGCCAAAACCT+TGG 0.522907 3_4:-67805960 Msa0516310:CDS
GCAGGAGATTCAAATATTGA+TGG 0.523586 3_4:-67806395 Msa0516310:CDS
GCATTACTGAAGATGCTTGA+GGG 0.524652 3_4:-67804579 Msa0516310:CDS
CCTCCTGAAGTTTGGTCTGG+TGG 0.529025 3_4:-67806806 Msa0516310:CDS
TACATGCTGGCCACAATGGA+AGG 0.532514 3_4:+67801696 None:intergenic
AACATGTAATTGGACAAGAA+AGG 0.533092 3_4:-67806610 Msa0516310:CDS
ACCTGTACGTGCAAAGATGA+AGG 0.533384 3_4:-67803843 Msa0516310:CDS
CACTGAAGCCTCACCTCCAA+CGG 0.533562 3_4:+67801921 None:intergenic
TCTACTGATATTAAGGCTCT+CGG 0.534855 3_4:+67804629 None:intergenic
GTACGTGCAAAGATGAAGGC+TGG 0.535276 3_4:-67803839 Msa0516310:CDS
GCTAAAATCCTTTATGGCAG+GGG 0.537495 3_4:-67801892 Msa0516310:CDS
TGGACAAGAAAGGGCCAAGA+AGG 0.537784 3_4:-67806600 Msa0516310:CDS
GGAGGTGAGGCTTCAGTGAG+AGG 0.538010 3_4:-67801916 Msa0516310:CDS
TAACATTGCCCCTTGCAGGC+TGG 0.539074 3_4:-67805344 Msa0516310:intron
ATTGTCAATGTTCCCGAGAA+GGG 0.544118 3_4:-67804375 Msa0516310:CDS
TCGCCGCCGCGGAGAGAAAG+GGG 0.544327 3_4:+67806971 None:intergenic
TCGAAAGATTGGTGTTGGGG+TGG 0.545065 3_4:-67806689 Msa0516310:CDS
TCGAGTTTGCGGTTGCGGGA+AGG 0.548071 3_4:+67807306 None:intergenic
TGTAATTATGAAACTGACCA+TGG 0.550169 3_4:+67801513 None:intergenic
ACCTGAATATTGTCACCTCT+CGG 0.551037 3_4:+67804339 None:intergenic
GTTGCATCTGCAATAACAAA+GGG 0.554210 3_4:+67805920 None:intergenic
TAGAGAAAACAATTTCGGAA+AGG 0.560690 3_4:-67803988 Msa0516310:intron
ATTCGATCGTTATCTTTCCA+AGG 0.564276 3_4:-67801866 Msa0516310:CDS
GTTTCGATCAAAACCTTCAA+AGG 0.567102 3_4:-67807119 Msa0516310:CDS
CTAACTTGCCTGAGTGAGTG+TGG 0.569064 3_4:+67805898 None:intergenic
CATAATTACAAATCATGGTG+TGG 0.569146 3_4:-67801500 Msa0516310:three_prime_UTR
AACATTTACAAACCTAGCCA+AGG 0.572679 3_4:+67805943 None:intergenic
TGAAGACTCCGTTGGAGGTG+AGG 0.573433 3_4:-67801929 Msa0516310:CDS
GCAACGGTTTGATTACATGC+TGG 0.574092 3_4:+67801683 None:intergenic
TTGATTAGAGTCTTCGACAA+GGG 0.575403 3_4:+67806892 None:intergenic
GTTGTTGATGAAGACTCCGT+TGG 0.581381 3_4:-67801937 Msa0516310:CDS
AATTCGAAAGATTGGTGTTG+GGG 0.581592 3_4:-67806692 Msa0516310:CDS
TATCTTTCCAAGGAGAAGAA+CGG 0.581840 3_4:-67801856 Msa0516310:CDS
TACTTGCCAAAACCTTGGCT+AGG 0.582606 3_4:-67805955 Msa0516310:CDS
AATATCAGTAGAGATGTCTC+TGG 0.582769 3_4:-67804618 Msa0516310:CDS
GATTGTCAATGTTCCCGAGA+AGG 0.583215 3_4:-67804376 Msa0516310:CDS
TGATTTCAACCCAATCCACA+TGG 0.586337 3_4:+67801575 None:intergenic
GGCGGCGATTTCATCCATAA+GGG 0.587537 3_4:-67806956 Msa0516310:CDS
TCCAACATAACCAGCCTGCA+AGG 0.587876 3_4:+67805334 None:intergenic
AACAGAACATTGATTCGTGT+GGG 0.590661 3_4:+67807205 None:intergenic
AGTAGAGATGTCTCTGGTGA+AGG 0.594236 3_4:-67804612 Msa0516310:CDS
CCAACATAACCAGCCTGCAA+GGG 0.595676 3_4:+67805335 None:intergenic
GAATATATCATGAAAAGTTG+TGG 0.596768 3_4:-67806544 Msa0516310:intron
GTTGATGAAGACTCCGTTGG+AGG 0.599048 3_4:-67801934 Msa0516310:CDS
ACCCGTTTACCTGATCCTGT+TGG 0.599247 3_4:+67806305 None:intergenic
AGATGCAACCACACTCACTC+AGG 0.599951 3_4:-67805906 Msa0516310:CDS
TGATTACATGCTGGCCACAA+TGG 0.604296 3_4:+67801692 None:intergenic
GACAAGGGTGTTGGAAGTGG+AGG 0.607729 3_4:+67806907 None:intergenic
TTTGGGGCAATACTGGTGGA+AGG 0.608398 3_4:-67801419 Msa0516310:three_prime_UTR
GGCATTACTGAAGATGCTTG+AGG 0.609163 3_4:-67804580 Msa0516310:CDS
ATAAAAGCATACCTCATACA+TGG 0.611000 3_4:+67802547 None:intergenic
GACAGAGCTTCCTTCCATTG+TGG 0.611284 3_4:-67801706 Msa0516310:CDS
GTAATTATGAAACTGACCAT+GGG 0.612306 3_4:+67801514 None:intergenic
GGTTGCATCTGCAATAACAA+AGG 0.613374 3_4:+67805919 None:intergenic
TAATACCTGAATTTGTTGGA+CGG 0.613858 3_4:-67803638 Msa0516310:CDS
GGGAATTATGATGTTTCTGG+TGG 0.617264 3_4:-67806764 Msa0516310:CDS
AATGTGGCAGCTGCACAGCA+AGG 0.619346 3_4:-67804770 Msa0516310:CDS
GAACAGAACATTGATTCGTG+TGG 0.624434 3_4:+67807204 None:intergenic
CCAGAAACATCATAATTCCC+AGG 0.626744 3_4:+67806767 None:intergenic
AGCGTAATTGAGATAACGCG+AGG 0.627927 3_4:+67807086 None:intergenic
AGTTCAATAGTGACTTCCCA+TGG 0.628073 3_4:-67801530 Msa0516310:three_prime_UTR
GGCCAAGAAGGTGCTATCTG+TGG 0.629236 3_4:-67806588 Msa0516310:CDS
AAAGCAATATTCTTCTAATG+GGG 0.630912 3_4:-67806328 Msa0516310:CDS
TCAGGCTGCAGATTATAATG+TGG 0.638713 3_4:-67804786 Msa0516310:intron
CAACATAACCAGCCTGCAAG+GGG 0.640266 3_4:+67805336 None:intergenic
ACTATAATAAATATCAGCAA+CGG 0.641364 3_4:+67801667 None:intergenic
TGGGGTGGGTCTAATATGGG+AGG 0.644752 3_4:-67806674 Msa0516310:CDS
CTGCTAGCTCCGGTGATTCG+GGG 0.646957 3_4:-67806715 Msa0516310:CDS
TTCAAACCCCTTTCTCTCCG+CGG 0.655565 3_4:-67806977 Msa0516310:CDS
GAAGGAAGTGAAGTGATAAG+GGG 0.656718 3_4:+67806997 None:intergenic
CAAGGAGAAGAACGGGTCGG+AGG 0.657030 3_4:-67801848 Msa0516310:intron
CCACCAGACCAAACTTCAGG+AGG 0.658452 3_4:+67806806 None:intergenic
GTGTTGATTAACGGTGAACG+TGG 0.659264 3_4:+67807019 None:intergenic
TTCTGTATTATAGACTACGG+AGG 0.662943 3_4:-67801754 Msa0516310:intron
GATTTCAACCCAATCCACAT+GGG 0.663583 3_4:+67801576 None:intergenic
TAAGTTACGTCAAATGTCCG+AGG 0.665816 3_4:+67801336 None:intergenic
TAGACTACGGAGGTTTCTGG+TGG 0.669450 3_4:-67801744 Msa0516310:CDS
AGAAACAAGAACCCTATAAG+CGG 0.677338 3_4:+67806841 None:intergenic
AAGCACTCTTTGGTTCTGTG+AGG 0.677760 3_4:+67803216 None:intergenic
AACTTCAGGAGGATCAACAA+AGG 0.682725 3_4:+67806817 None:intergenic
TTGATTAACGGTGAACGTGG+TGG 0.683612 3_4:+67807022 None:intergenic
TTCCAAGGAGAAGAACGGGT+CGG 0.684154 3_4:-67801851 Msa0516310:CDS
GCATTCAATTACACACACGC+TGG 0.686030 3_4:-67807058 Msa0516310:CDS
TATGGATGAAATCGCCGCCG+CGG 0.692523 3_4:+67806960 None:intergenic
GTCGTCATCATCAACAACGT+CGG 0.694540 3_4:+67806367 None:intergenic
TTTGATTAGAGTCTTCGACA+AGG 0.700712 3_4:+67806891 None:intergenic
GCGTAATTGAGATAACGCGA+GGG 0.704959 3_4:+67807087 None:intergenic
AAACCCCTTTCTCTCCGCGG+CGG 0.707422 3_4:-67806974 Msa0516310:CDS
GGAGCCCGAAAGCATCCGAG+AGG 0.742740 3_4:-67804354 Msa0516310:CDS
GAAGGCTGGAAGTGTCACAG+AGG 0.760315 3_4:-67803825 Msa0516310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATAACTTAAAATTAG+AGG - chr3_4:67802901-67802920 Msa0516310:intron 10.0%
!! TGAAATGAATAATTAATATA+GGG + chr3_4:67806660-67806679 None:intergenic 10.0%
!!! CATTTGTTAAAATAATATAA+AGG - chr3_4:67807117-67807136 Msa0516310:CDS 10.0%
!! ATAAAAATCCAAAAGATAAA+AGG - chr3_4:67801354-67801373 Msa0516310:three_prime_UTR 15.0%
!!! ATTTATTTCCTTTTATCTTT+TGG + chr3_4:67801365-67801384 None:intergenic 15.0%
!! TGTTCTTATATATAAGAAAA+TGG + chr3_4:67803124-67803143 None:intergenic 15.0%
!!! TCATCAAATTTTGAATTTTT+TGG - chr3_4:67803814-67803833 Msa0516310:CDS 15.0%
!!! TGAAAATTATTATTTTTGAC+AGG - chr3_4:67805041-67805060 Msa0516310:intron 15.0%
!! GTGAAATGAATAATTAATAT+AGG + chr3_4:67806661-67806680 None:intergenic 15.0%
!!! TTTTGGATTTTTATTTACAG+TGG + chr3_4:67801348-67801367 None:intergenic 20.0%
!! GAATCTATTATCTATGAATA+TGG + chr3_4:67801474-67801493 None:intergenic 20.0%
!!! TTTTTAATGTTCTTACTATC+TGG - chr3_4:67802302-67802321 Msa0516310:intron 20.0%
!! AAAAGCAATATTCTTCTAAT+GGG - chr3_4:67802403-67802422 Msa0516310:intron 20.0%
!! TAAATCACAAATTGTTCTAA+TGG - chr3_4:67802539-67802558 Msa0516310:intron 20.0%
!! CAAATTTAAATGTACATAGA+TGG - chr3_4:67803142-67803161 Msa0516310:intron 20.0%
!! TATATCTACATTTGTTCATT+AGG + chr3_4:67803184-67803203 None:intergenic 20.0%
!! ATTTAGACAATATTACAATG+TGG - chr3_4:67803482-67803501 Msa0516310:intron 20.0%
!! AACAAAAAACACTCAAATAT+TGG + chr3_4:67803740-67803759 None:intergenic 20.0%
!! ACATTGCATAAATTTATTTC+AGG - chr3_4:67803928-67803947 Msa0516310:intron 20.0%
!! GGAAAATATAGAAAATAATG+GGG + chr3_4:67804031-67804050 None:intergenic 20.0%
!! GGGAAAATATAGAAAATAAT+GGG + chr3_4:67804032-67804051 None:intergenic 20.0%
!! AGGGAAAATATAGAAAATAA+TGG + chr3_4:67804033-67804052 None:intergenic 20.0%
!! ATATTTGTGATCATTAAACT+TGG - chr3_4:67805177-67805196 Msa0516310:intron 20.0%
!!! TATTGATAGTGAAATTGAAT+TGG - chr3_4:67805293-67805312 Msa0516310:intron 20.0%
!!! AAAAAAACAAAGCACTTTTA+AGG + chr3_4:67805445-67805464 None:intergenic 20.0%
!! TGTGTTATAGATATAATGTT+AGG + chr3_4:67805672-67805691 None:intergenic 20.0%
!! AGAACTTATAAAAACAACTT+TGG + chr3_4:67805786-67805805 None:intergenic 20.0%
!!! AATTCCACTACTTTTTTATT+TGG + chr3_4:67805960-67805979 None:intergenic 20.0%
!!! AAATAAAAAAGTAGTGGAAT+TGG - chr3_4:67805959-67805978 Msa0516310:CDS 20.0%
!!! TCATTTAGATTTTGAATTGT+TGG - chr3_4:67805986-67806005 Msa0516310:intron 20.0%
!!! AGCATTTTTCTGATATAAAA+CGG + chr3_4:67806452-67806471 None:intergenic 20.0%
!! ACTATAATAAATATCAGCAA+CGG + chr3_4:67807068-67807087 None:intergenic 20.0%
!! AGTTTCATAATTACAAATCA+TGG - chr3_4:67807227-67807246 Msa0516310:five_prime_UTR 20.0%
!!! TTATTCATTGATGTAGTTTT+GGG - chr3_4:67807296-67807315 Msa0516310:five_prime_UTR 20.0%
!!! AATAAAGTGATGTACATTTT+TGG + chr3_4:67807341-67807360 None:intergenic 20.0%
!! ATAAAATAAAAAGACCAAAC+AGG + chr3_4:67807369-67807388 None:intergenic 20.0%
!! GAACACATTTTTCATTTTCA+GGG + chr3_4:67801402-67801421 None:intergenic 25.0%
!! TGAACACATTTTTCATTTTC+AGG + chr3_4:67801403-67801422 None:intergenic 25.0%
!!! GTATGTATTTTTTGTGTTCA+AGG + chr3_4:67801508-67801527 None:intergenic 25.0%
! AATCAATTAATTCAACCCTA+TGG - chr3_4:67801574-67801593 Msa0516310:three_prime_UTR 25.0%
! GAATATATCATGAAAAGTTG+TGG - chr3_4:67802188-67802207 Msa0516310:intron 25.0%
! GAAAAGCAATATTCTTCTAA+TGG - chr3_4:67802402-67802421 Msa0516310:intron 25.0%
! AAAGCAATATTCTTCTAATG+GGG - chr3_4:67802404-67802423 Msa0516310:intron 25.0%
! AAATTTCAAGGAAATGATCA+TGG + chr3_4:67802681-67802700 None:intergenic 25.0%
! CAAAGAAAAACAAGTTAAAC+TGG + chr3_4:67802730-67802749 None:intergenic 25.0%
!!! TTTTCTTTGATGTTGTTTCA+AGG - chr3_4:67802741-67802760 Msa0516310:intron 25.0%
! GTTCTATCAAAGATCATATT+TGG + chr3_4:67802941-67802960 None:intergenic 25.0%
! AAAAGAAGAATGCACATAAT+TGG - chr3_4:67803064-67803083 Msa0516310:intron 25.0%
! AAAGAAGAATGCACATAATT+GGG - chr3_4:67803065-67803084 Msa0516310:intron 25.0%
!! TATTACAATGTGGTTTTTCT+TGG - chr3_4:67803492-67803511 Msa0516310:intron 25.0%
! AAAACCACATTGCAATAAAA+GGG + chr3_4:67803680-67803699 None:intergenic 25.0%
! AAAAACCACATTGCAATAAA+AGG + chr3_4:67803681-67803700 None:intergenic 25.0%
! AATATTGGATACAGTAACAT+GGG + chr3_4:67803725-67803744 None:intergenic 25.0%
! AAATATTGGATACAGTAACA+TGG + chr3_4:67803726-67803745 None:intergenic 25.0%
! ACAGTGAAAAAATACAAAGT+CGG + chr3_4:67804057-67804076 None:intergenic 25.0%
! ATAGACATAAGCATACTTAA+AGG + chr3_4:67804556-67804575 None:intergenic 25.0%
!! AAGAATATACTTTTCATCTG+CGG - chr3_4:67804704-67804723 Msa0516310:intron 25.0%
! TGACTTAGAGAAAACAATTT+CGG - chr3_4:67804739-67804758 Msa0516310:CDS 25.0%
! AAGAAGACATTCCAAATTAA+TGG - chr3_4:67805553-67805572 Msa0516310:intron 25.0%
! AATCATTAAAACTACCACAA+AGG + chr3_4:67805928-67805947 None:intergenic 25.0%
! TCAACCAAATAAAAAAGTAG+TGG - chr3_4:67805953-67805972 Msa0516310:CDS 25.0%
!!! AATTTTTTCATAGTGCGATA+TGG - chr3_4:67806229-67806248 Msa0516310:intron 25.0%
! TATTACTCAACGAAGATTAT+TGG - chr3_4:67806705-67806724 Msa0516310:CDS 25.0%
!! GTTTTCTGTATTATAGACTA+CGG - chr3_4:67806975-67806994 Msa0516310:CDS 25.0%
! CAAAACTACATCAATGAATA+AGG + chr3_4:67807297-67807316 None:intergenic 25.0%
!! CTTATTCATTGATGTAGTTT+TGG - chr3_4:67807295-67807314 Msa0516310:five_prime_UTR 25.0%
!!! TATTCATTGATGTAGTTTTG+GGG - chr3_4:67807297-67807316 Msa0516310:five_prime_UTR 25.0%
!!! TTTATTTTATCCAATCTCCT+CGG - chr3_4:67807379-67807398 Msa0516310:five_prime_UTR 25.0%
TAGTATTACTACTACCCTTA+TGG + chr3_4:67801793-67801812 None:intergenic 30.0%
CATCATAAGGAACATGATTA+GGG + chr3_4:67801868-67801887 None:intergenic 30.0%
ACATCATAAGGAACATGATT+AGG + chr3_4:67801869-67801888 None:intergenic 30.0%
TTATGATGTAACCGCTTATA+GGG - chr3_4:67801880-67801899 Msa0516310:CDS 30.0%
AACATGTAATTGGACAAGAA+AGG - chr3_4:67802122-67802141 Msa0516310:intron 30.0%
ACATGTAATTGGACAAGAAA+GGG - chr3_4:67802123-67802142 Msa0516310:intron 30.0%
ATATCATGAAAAGTTGTGGT+TGG - chr3_4:67802192-67802211 Msa0516310:intron 30.0%
AGTAATAACATAACATGCTG+AGG + chr3_4:67802225-67802244 None:intergenic 30.0%
! TTCTTACTATCTGGAATGTT+AGG - chr3_4:67802311-67802330 Msa0516310:intron 30.0%
TTTAAGAAAACGACGATTTC+TGG + chr3_4:67802618-67802637 None:intergenic 30.0%
!! TCGTCGTTTTCTTAAATAGA+TGG - chr3_4:67802622-67802641 Msa0516310:CDS 30.0%
!! CGTCGTTTTCTTAAATAGAT+GGG - chr3_4:67802623-67802642 Msa0516310:CDS 30.0%
!! GTCGTTTTCTTAAATAGATG+GGG - chr3_4:67802624-67802643 Msa0516310:CDS 30.0%
! TCGTTTTCTTAAATAGATGG+GGG - chr3_4:67802625-67802644 Msa0516310:CDS 30.0%
AAAATTAGAGGCCAATGAAT+TGG - chr3_4:67802913-67802932 Msa0516310:intron 30.0%
CATATTTGGATCCAATTCAT+TGG + chr3_4:67802927-67802946 None:intergenic 30.0%
TGATCTTTGATAGAACACTA+TGG - chr3_4:67802945-67802964 Msa0516310:intron 30.0%
! ATAAGATTAGATGATGGCAA+TGG + chr3_4:67803091-67803110 None:intergenic 30.0%
ATTGCCATCATCTAATCTTA+TGG - chr3_4:67803090-67803109 Msa0516310:intron 30.0%
AAGTCCATAAGATTAGATGA+TGG + chr3_4:67803097-67803116 None:intergenic 30.0%
! ATAATTCCATGAGGTACTTT+CGG + chr3_4:67803243-67803262 None:intergenic 30.0%
! GAATTATCACTTCCTTTTCT+AGG - chr3_4:67803256-67803275 Msa0516310:intron 30.0%
AAGCTTCATGTTTGTGTTTA+AGG - chr3_4:67803356-67803375 Msa0516310:intron 30.0%
AACCTCTTGTGTAAAAAACA+GGG - chr3_4:67803574-67803593 Msa0516310:intron 30.0%
! ACTTATTTAGAACATTCACC+TGG - chr3_4:67803778-67803797 Msa0516310:intron 30.0%
AGTTGACAAGATTACCAAAA+AGG - chr3_4:67804003-67804022 Msa0516310:CDS 30.0%
!! AAAATAATGGGGAACCTTTT+TGG + chr3_4:67804020-67804039 None:intergenic 30.0%
GAAAAAATACAAAGTCGGTA+GGG + chr3_4:67804052-67804071 None:intergenic 30.0%
TGAAAAAATACAAAGTCGGT+AGG + chr3_4:67804053-67804072 None:intergenic 30.0%
AGACATCTCTACTGATATTA+AGG + chr3_4:67804113-67804132 None:intergenic 30.0%
!!! TGTTCAGTTTTTTTTGGTGT+TGG + chr3_4:67804203-67804222 None:intergenic 30.0%
TCTTCATGAATTACAGTTTC+AGG - chr3_4:67804429-67804448 Msa0516310:intron 30.0%
ATATTCATGGAACTGATACA+TGG - chr3_4:67804488-67804507 Msa0516310:intron 30.0%
TATTCATGGAACTGATACAT+GGG - chr3_4:67804489-67804508 Msa0516310:intron 30.0%
! GCAGATGAAAAGTATATTCT+TGG + chr3_4:67804705-67804724 None:intergenic 30.0%
! TGTTTTCTCTAAGTCAATGA+AGG + chr3_4:67804735-67804754 None:intergenic 30.0%
TAGAGAAAACAATTTCGGAA+AGG - chr3_4:67804744-67804763 Msa0516310:CDS 30.0%
! ACTGCTGCTATATAATTTTC+AGG + chr3_4:67804780-67804799 None:intergenic 30.0%
!! ATAGCAGCAGTTTTATAATG+TGG - chr3_4:67804789-67804808 Msa0516310:intron 30.0%
! ATTGACTGGTTATAGAAACA+CGG + chr3_4:67804821-67804840 None:intergenic 30.0%
CAAATCCAATAGAAGAATCT+TGG + chr3_4:67804865-67804884 None:intergenic 30.0%
CAAGATTCTTCTATTGGATT+TGG - chr3_4:67804863-67804882 Msa0516310:intron 30.0%
GCAATTGCATCATCATTATT+AGG - chr3_4:67804932-67804951 Msa0516310:intron 30.0%
GATCAAACTTGAAATTAGCT+TGG + chr3_4:67805011-67805030 None:intergenic 30.0%
GGTTTAATACCTGAATTTGT+TGG - chr3_4:67805090-67805109 Msa0516310:intron 30.0%
!! TAATACCTGAATTTGTTGGA+CGG - chr3_4:67805094-67805113 Msa0516310:intron 30.0%
AACTGAAAATCAACTCATTC+AGG - chr3_4:67805146-67805165 Msa0516310:intron 30.0%
GATAGTGAAATTGAATTGGT+TGG - chr3_4:67805297-67805316 Msa0516310:intron 30.0%
CTGTAGAAATTAATGGTATC+AGG + chr3_4:67805494-67805513 None:intergenic 30.0%
CTGATACCATTAATTTCTAC+AGG - chr3_4:67805492-67805511 Msa0516310:intron 30.0%
GGAAACTTACTCCATTAATT+TGG + chr3_4:67805567-67805586 None:intergenic 30.0%
AGTGAAATGTACAAGGAATT+AGG + chr3_4:67805598-67805617 None:intergenic 30.0%
! GTTTTCATAAGCTATCATAG+AGG - chr3_4:67805722-67805741 Msa0516310:intron 30.0%
CTCAAAGAAGTTAATCCAAA+CGG - chr3_4:67805844-67805863 Msa0516310:intron 30.0%
TCAAAGAAGTTAATCCAAAC+GGG - chr3_4:67805845-67805864 Msa0516310:intron 30.0%
!!! TGTGGTAGTTTTAATGATTG+AGG - chr3_4:67805929-67805948 Msa0516310:CDS 30.0%
! AGATTTTGAATTGTTGGCAA+AGG - chr3_4:67805992-67806011 Msa0516310:intron 30.0%
! ATGTTGTGCATTTCATTTTC+AGG - chr3_4:67806051-67806070 Msa0516310:intron 30.0%
! TCAGGTGAAACTACATTTTA+CGG - chr3_4:67806069-67806088 Msa0516310:intron 30.0%
CAAGCAATGTCTAAAAATAC+TGG - chr3_4:67806118-67806137 Msa0516310:intron 30.0%
!!! GGCAATAATAGAGAGTATTT+TGG - chr3_4:67806156-67806175 Msa0516310:intron 30.0%
! ATAAAAGCATACCTCATACA+TGG + chr3_4:67806188-67806207 None:intergenic 30.0%
ATAGGTTAATACACACATGT+GGG + chr3_4:67806329-67806348 None:intergenic 30.0%
TATAGGTTAATACACACATG+TGG + chr3_4:67806330-67806349 None:intergenic 30.0%
TCAGAAAAATGCTCTTCTTT+AGG - chr3_4:67806459-67806478 Msa0516310:intron 30.0%
CAAGAAGACACTTAAATATG+AGG + chr3_4:67806548-67806567 None:intergenic 30.0%
CTCATATTTAAGTGTCTTCT+TGG - chr3_4:67806546-67806565 Msa0516310:CDS 30.0%
GTAATTATGAAACTGACCAT+GGG + chr3_4:67807221-67807240 None:intergenic 30.0%
TGTAATTATGAAACTGACCA+TGG + chr3_4:67807222-67807241 None:intergenic 30.0%
CATAATTACAAATCATGGTG+TGG - chr3_4:67807232-67807251 Msa0516310:five_prime_UTR 30.0%
! CACTTTATTTGATTCCTGTT+TGG - chr3_4:67807352-67807371 Msa0516310:five_prime_UTR 30.0%
! TATTCTGAGAATCGAGTTTG+CGG + chr3_4:67801440-67801459 None:intergenic 35.0%
!! AACAGAACATTGATTCGTGT+GGG + chr3_4:67801530-67801549 None:intergenic 35.0%
GTTTCGATCAAAACCTTCAA+AGG - chr3_4:67801613-67801632 Msa0516310:three_prime_UTR 35.0%
!! TGATAAGGGGTGTTGATTAA+CGG + chr3_4:67801725-67801744 None:intergenic 35.0%
TGAAGGAAGTGAAGTGATAA+GGG + chr3_4:67801739-67801758 None:intergenic 35.0%
TTGAAGGAAGTGAAGTGATA+AGG + chr3_4:67801740-67801759 None:intergenic 35.0%
TTGATTAGAGTCTTCGACAA+GGG + chr3_4:67801843-67801862 None:intergenic 35.0%
TTTGATTAGAGTCTTCGACA+AGG + chr3_4:67801844-67801863 None:intergenic 35.0%
CTATAAGCGGTTACATCATA+AGG + chr3_4:67801881-67801900 None:intergenic 35.0%
CTTATGATGTAACCGCTTAT+AGG - chr3_4:67801879-67801898 Msa0516310:CDS 35.0%
AGAAACAAGAACCCTATAAG+CGG + chr3_4:67801894-67801913 None:intergenic 35.0%
!! AATTATGATGTTTCTGGTGG+TGG - chr3_4:67801971-67801990 Msa0516310:CDS 35.0%
! GAATTCGAAAGATTGGTGTT+GGG - chr3_4:67802039-67802058 Msa0516310:intron 35.0%
!! AATTCGAAAGATTGGTGTTG+GGG - chr3_4:67802040-67802059 Msa0516310:intron 35.0%
!! TTACAAATCTCCTTTGGAGT+AGG + chr3_4:67802091-67802110 None:intergenic 35.0%
ACTCCAAAGGAGATTTGTAA+AGG - chr3_4:67802091-67802110 Msa0516310:intron 35.0%
CTCCAAAGGAGATTTGTAAA+GGG - chr3_4:67802092-67802111 Msa0516310:intron 35.0%
GGGCTTGATAAACATGTAAT+TGG - chr3_4:67802112-67802131 Msa0516310:intron 35.0%
GCAGGAGATTCAAATATTGA+TGG - chr3_4:67802337-67802356 Msa0516310:intron 35.0%
! TTGAATTTTGTGCTCAGCAT+TGG - chr3_4:67802579-67802598 Msa0516310:CDS 35.0%
! TTTTCTTAAATAGATGGGGG+AGG - chr3_4:67802628-67802647 Msa0516310:CDS 35.0%
! GAGGCATTAACGAAATTTCA+AGG + chr3_4:67802693-67802712 None:intergenic 35.0%
!! TTTGATGTTGTTTCAAGGAC+AGG - chr3_4:67802746-67802765 Msa0516310:intron 35.0%
!! TTGATGTTGTTTCAAGGACA+GGG - chr3_4:67802747-67802766 Msa0516310:intron 35.0%
AACATTTACAAACCTAGCCA+AGG + chr3_4:67802792-67802811 None:intergenic 35.0%
GTTGCATCTGCAATAACAAA+GGG + chr3_4:67802815-67802834 None:intergenic 35.0%
TGGAAAGTCTTTCAATAGAG+GGG + chr3_4:67803040-67803059 None:intergenic 35.0%
CTGGAAAGTCTTTCAATAGA+GGG + chr3_4:67803041-67803060 None:intergenic 35.0%
!!! TGTGCATTCTTCTTTTTTCC+TGG + chr3_4:67803060-67803079 None:intergenic 35.0%
AAGGAAGTGATAATTCCATG+AGG + chr3_4:67803252-67803271 None:intergenic 35.0%
! TTATCACTTCCTTTTCTAGG+TGG - chr3_4:67803259-67803278 Msa0516310:intron 35.0%
AAATTCCAACCACCTAGAAA+AGG + chr3_4:67803271-67803290 None:intergenic 35.0%
CATATTATACAAGCTCCTTG+CGG - chr3_4:67803435-67803454 Msa0516310:intron 35.0%
GTCACAAATTATTTACCGCA+AGG + chr3_4:67803453-67803472 None:intergenic 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - chr3_4:67803524-67803543 Msa0516310:intron 35.0%
CAACCTCTTGTGTAAAAAAC+AGG - chr3_4:67803573-67803592 Msa0516310:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr3_4:67803579-67803598 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr3_4:67803579-67803598 Msa0516310:intron 35.0%
TTGCGTACAATACACCAAAA+TGG - chr3_4:67803602-67803621 Msa0516310:CDS 35.0%
GTACAATACACCAAAATGGT+GGG - chr3_4:67803606-67803625 Msa0516310:CDS 35.0%
GATGAATCACACATTAAACC+AGG + chr3_4:67803799-67803818 None:intergenic 35.0%
TCATGTAACTAGCTACTCTT+CGG - chr3_4:67803853-67803872 Msa0516310:CDS 35.0%
AAATCACTTCTCGTCATTTC+AGG - chr3_4:67804080-67804099 Msa0516310:intron 35.0%
TCTACTGATATTAAGGCTCT+CGG + chr3_4:67804106-67804125 None:intergenic 35.0%
AATATCAGTAGAGATGTCTC+TGG - chr3_4:67804114-67804133 Msa0516310:intron 35.0%
ACCAAAAAAAACTGAACAGC+TGG - chr3_4:67804205-67804224 Msa0516310:intron 35.0%
!!! TCCAGCTGTTCAGTTTTTTT+TGG + chr3_4:67804209-67804228 None:intergenic 35.0%
GGAACAAGATCAACATACAA+AGG + chr3_4:67804321-67804340 None:intergenic 35.0%
! ACAATCTGGATTGGAAAGAA+TGG + chr3_4:67804342-67804361 None:intergenic 35.0%
TTTATTTGCTTGTAGCCTGT+AGG - chr3_4:67804454-67804473 Msa0516310:intron 35.0%
TTATTTGCTTGTAGCCTGTA+GGG - chr3_4:67804455-67804474 Msa0516310:intron 35.0%
! AATATACTTTTCATCTGCGG+AGG - chr3_4:67804707-67804726 Msa0516310:intron 35.0%
AGCAGTGATCTTATAGCATA+TGG - chr3_4:67805069-67805088 Msa0516310:intron 35.0%
GAAAATCAACTCATTCAGGT+AGG - chr3_4:67805150-67805169 Msa0516310:intron 35.0%
TTGAATGAAGTAGTCAGTAG+TGG - chr3_4:67805256-67805275 Msa0516310:intron 35.0%
TGAATGAAGTAGTCAGTAGT+GGG - chr3_4:67805257-67805276 Msa0516310:intron 35.0%
! TGAAATTGAATTGGTTGGTG+AGG - chr3_4:67805302-67805321 Msa0516310:intron 35.0%
CACTCTAACTGAATGAAGAA+GGG + chr3_4:67805401-67805420 None:intergenic 35.0%
ACACTCTAACTGAATGAAGA+AGG + chr3_4:67805402-67805421 None:intergenic 35.0%
TGAGGACCTGTAGAAATTAA+TGG + chr3_4:67805501-67805520 None:intergenic 35.0%
TAATGGAGTAAGTTTCCACA+AGG - chr3_4:67805570-67805589 Msa0516310:intron 35.0%
TCTCTCCAATAGTTTAAGCA+CGG - chr3_4:67805630-67805649 Msa0516310:intron 35.0%
AAGCTATCATAGAGGTCTTA+AGG - chr3_4:67805730-67805749 Msa0516310:intron 35.0%
! AAGCACTTGTTACACTGTTT+AGG + chr3_4:67805809-67805828 None:intergenic 35.0%
CTTGTTTGTTTATGCCTTTG+TGG - chr3_4:67805911-67805930 Msa0516310:CDS 35.0%
TGTCTAAAAATACTGGTGCT+CGG - chr3_4:67806125-67806144 Msa0516310:intron 35.0%
! AAACTCATGGTTTGTAGGTA+GGG + chr3_4:67806410-67806429 None:intergenic 35.0%
! TAAACTCATGGTTTGTAGGT+AGG + chr3_4:67806411-67806430 None:intergenic 35.0%
! CAAGTAAACTCATGGTTTGT+AGG + chr3_4:67806415-67806434 None:intergenic 35.0%
TTAATGCCCTGCTTCAATAT+TGG + chr3_4:67806497-67806516 None:intergenic 35.0%
ACTTAAATATGAGGATGAGG+AGG + chr3_4:67806539-67806558 None:intergenic 35.0%
GACACTTAAATATGAGGATG+AGG + chr3_4:67806542-67806561 None:intergenic 35.0%
GTAATATGTCCTTAGTGTAG+TGG + chr3_4:67806691-67806710 None:intergenic 35.0%
!! ACGAAGATTATTGGCTTGAT+TGG - chr3_4:67806714-67806733 Msa0516310:CDS 35.0%
!! CGAAGATTATTGGCTTGATT+GGG - chr3_4:67806715-67806734 Msa0516310:CDS 35.0%
ATTCGATCGTTATCTTTCCA+AGG - chr3_4:67806866-67806885 Msa0516310:CDS 35.0%
TATCTTTCCAAGGAGAAGAA+CGG - chr3_4:67806876-67806895 Msa0516310:CDS 35.0%
TTCTGTATTATAGACTACGG+AGG - chr3_4:67806978-67806997 Msa0516310:CDS 35.0%
! TAGATTCAGATTTTCCCATG+TGG - chr3_4:67807142-67807161 Msa0516310:CDS 35.0%
TAGAAAACGTATGCGACATT+TGG + chr3_4:67807262-67807281 None:intergenic 35.0%
!! CAACATTGCAGTTTCGAGTT+TGG - chr3_4:67801315-67801334 Msa0516310:three_prime_UTR 40.0%
!! GAACAGAACATTGATTCGTG+TGG + chr3_4:67801531-67801550 None:intergenic 40.0%
!!! AGGGTTGCTTTTTCCTTTGA+AGG + chr3_4:67801629-67801648 None:intergenic 40.0%
GAAGGAAGTGAAGTGATAAG+GGG + chr3_4:67801738-67801757 None:intergenic 40.0%
AACTTCAGGAGGATCAACAA+AGG + chr3_4:67801918-67801937 None:intergenic 40.0%
TTGTTGATCCTCCTGAAGTT+TGG - chr3_4:67801918-67801937 Msa0516310:CDS 40.0%
CCAGAAACATCATAATTCCC+AGG + chr3_4:67801968-67801987 None:intergenic 40.0%
CCTGGGAATTATGATGTTTC+TGG - chr3_4:67801965-67801984 Msa0516310:CDS 40.0%
!! GGGAATTATGATGTTTCTGG+TGG - chr3_4:67801968-67801987 Msa0516310:CDS 40.0%
ATTCGGGGAATTCGAAAGAT+TGG - chr3_4:67802032-67802051 Msa0516310:intron 40.0%
GGAATTCGAAAGATTGGTGT+TGG - chr3_4:67802038-67802057 Msa0516310:intron 40.0%
! AGGTAGTTTTCCTACTCCAA+AGG - chr3_4:67802078-67802097 Msa0516310:intron 40.0%
AGCCCTTTACAAATCTCCTT+TGG + chr3_4:67802097-67802116 None:intergenic 40.0%
CGTTAATGCCTCATTTCTCA+TGG - chr3_4:67802701-67802720 Msa0516310:intron 40.0%
GACATTACTTGCCAAAACCT+TGG - chr3_4:67802772-67802791 Msa0516310:intron 40.0%
! TACAAACCTAGCCAAGGTTT+TGG + chr3_4:67802786-67802805 None:intergenic 40.0%
GGTTGCATCTGCAATAACAA+AGG + chr3_4:67802816-67802835 None:intergenic 40.0%
CCTGGAAAGTCTTTCAATAG+AGG + chr3_4:67803042-67803061 None:intergenic 40.0%
CCTCTATTGAAAGACTTTCC+AGG - chr3_4:67803039-67803058 Msa0516310:intron 40.0%
TGGTTATGTTGGAGAAGATG+TGG - chr3_4:67803408-67803427 Msa0516310:intron 40.0%
CGCAAGGAGCTTGTATAATA+TGG + chr3_4:67803437-67803456 None:intergenic 40.0%
! TTACACAAGAGGTTGTTTCC+AGG + chr3_4:67803568-67803587 None:intergenic 40.0%
CGTACAATACACCAAAATGG+TGG - chr3_4:67803605-67803624 Msa0516310:CDS 40.0%
! GTTGCCCTTTTATTGCAATG+TGG - chr3_4:67803673-67803692 Msa0516310:intron 40.0%
TCAGGCTGCAGATTATAATG+TGG - chr3_4:67803946-67803965 Msa0516310:intron 40.0%
GCATTACTGAAGATGCTTGA+GGG - chr3_4:67804153-67804172 Msa0516310:intron 40.0%
GGAACATTGACAATCTGGAT+TGG + chr3_4:67804351-67804370 None:intergenic 40.0%
ATTGTCAATGTTCCCGAGAA+GGG - chr3_4:67804357-67804376 Msa0516310:CDS 40.0%
ACCTGAATATTGTCACCTCT+CGG + chr3_4:67804396-67804415 None:intergenic 40.0%
TATTTGCTTGTAGCCTGTAG+GGG - chr3_4:67804456-67804475 Msa0516310:intron 40.0%
ATATATCTGATAGCCCCTAC+AGG + chr3_4:67804472-67804491 None:intergenic 40.0%
GGGGCTATCAGATATATTCA+TGG - chr3_4:67804475-67804494 Msa0516310:intron 40.0%
ATCATTGTATCTGTGCACTC+TGG - chr3_4:67804580-67804599 Msa0516310:CDS 40.0%
TAATTGCAAAGAGCTGTCTG+TGG - chr3_4:67804634-67804653 Msa0516310:intron 40.0%
AAGGTGATCAACAGATTGAC+TGG + chr3_4:67804835-67804854 None:intergenic 40.0%
CAATCTGTTGATCACCTTTC+AGG - chr3_4:67804837-67804856 Msa0516310:intron 40.0%
GACCAATCTTGTAAGCATAC+TGG - chr3_4:67804972-67804991 Msa0516310:intron 40.0%
AGCCAGTATGCTTACAAGAT+TGG + chr3_4:67804977-67804996 None:intergenic 40.0%
GCTGACAGACTAACAAGAAT+AGG + chr3_4:67805123-67805142 None:intergenic 40.0%
!! TGCTTCTCTAAAGCACTCTT+TGG + chr3_4:67805529-67805548 None:intergenic 40.0%
TGTCAGCAGTGAAATGTACA+AGG + chr3_4:67805605-67805624 None:intergenic 40.0%
CTCTCCAATAGTTTAAGCAC+GGG - chr3_4:67805631-67805650 Msa0516310:intron 40.0%
ATTGTTGGCAAAGGCTTTCT+TGG - chr3_4:67806001-67806020 Msa0516310:intron 40.0%
TTGTTGGCAAAGGCTTTCTT+GGG - chr3_4:67806002-67806021 Msa0516310:intron 40.0%
GTCTAAAAATACTGGTGCTC+GGG - chr3_4:67806126-67806145 Msa0516310:intron 40.0%
TCTAAAAATACTGGTGCTCG+GGG - chr3_4:67806127-67806146 Msa0516310:intron 40.0%
TTTGGTAGATGCCATGTATG+AGG - chr3_4:67806174-67806193 Msa0516310:intron 40.0%
! AACTCATGGTTTGTAGGTAG+GGG + chr3_4:67806409-67806428 None:intergenic 40.0%
GCAAACAGCAAGTAAACTCA+TGG + chr3_4:67806423-67806442 None:intergenic 40.0%
!! TGAGTTTACTTGCTGTTTGC+TGG - chr3_4:67806423-67806442 Msa0516310:intron 40.0%
! TCTTCTTTAGGTTCCACAAC+TGG - chr3_4:67806471-67806490 Msa0516310:intron 40.0%
AACTGGCCAATATTGAAGCA+GGG - chr3_4:67806488-67806507 Msa0516310:intron 40.0%
ACCTAACTTCCACTACACTA+AGG - chr3_4:67806679-67806698 Msa0516310:CDS 40.0%
! TCCTTAGTGTAGTGGAAGTT+AGG + chr3_4:67806683-67806702 None:intergenic 40.0%
!! AGAGGCGCTAAAATCCTTTA+TGG - chr3_4:67806834-67806853 Msa0516310:CDS 40.0%
CGCTAAAATCCTTTATGGCA+GGG - chr3_4:67806839-67806858 Msa0516310:CDS 40.0%
GCTAAAATCCTTTATGGCAG+GGG - chr3_4:67806840-67806859 Msa0516310:CDS 40.0%
ATCTTTCCAAGGAGAAGAAC+GGG - chr3_4:67806877-67806896 Msa0516310:CDS 40.0%
TTATAGACTACGGAGGTTTC+TGG - chr3_4:67806985-67807004 Msa0516310:CDS 40.0%
! TCAGATTTTCCCATGTGGAT+TGG - chr3_4:67807147-67807166 Msa0516310:exon 40.0%
! CAGATTTTCCCATGTGGATT+GGG - chr3_4:67807148-67807167 Msa0516310:exon 40.0%
GATTTCAACCCAATCCACAT+GGG + chr3_4:67807159-67807178 None:intergenic 40.0%
TGATTTCAACCCAATCCACA+TGG + chr3_4:67807160-67807179 None:intergenic 40.0%
AGTTCAATAGTGACTTCCCA+TGG - chr3_4:67807202-67807221 Msa0516310:five_prime_UTR 40.0%
!!! ATGTAGTTTTGGGGCAATAC+TGG - chr3_4:67807306-67807325 Msa0516310:five_prime_UTR 40.0%
TAAGTTACGTCAAATGTCCG+AGG + chr3_4:67807399-67807418 None:intergenic 40.0%
GCGTAATTGAGATAACGCGA+GGG + chr3_4:67801648-67801667 None:intergenic 45.0%
AGCGTAATTGAGATAACGCG+AGG + chr3_4:67801649-67801668 None:intergenic 45.0%
GCATTCAATTACACACACGC+TGG - chr3_4:67801674-67801693 Msa0516310:three_prime_UTR 45.0%
TTGATTAACGGTGAACGTGG+TGG + chr3_4:67801713-67801732 None:intergenic 45.0%
!! GTGTTGATTAACGGTGAACG+TGG + chr3_4:67801716-67801735 None:intergenic 45.0%
! GTGGAATTGTTGTTCGTCCT+GGG - chr3_4:67801948-67801967 Msa0516310:CDS 45.0%
!! TATGATGTTTCTGGTGGTGG+TGG - chr3_4:67801974-67801993 Msa0516310:CDS 45.0%
TTTCGAATTCCCCGAATCAC+CGG + chr3_4:67802029-67802048 None:intergenic 45.0%
TGTTGGGGTGGGTCTAATAT+GGG - chr3_4:67802055-67802074 Msa0516310:intron 45.0%
! ATCTGGAATGTTAGGCATGC+AGG - chr3_4:67802319-67802338 Msa0516310:intron 45.0%
GTCGTCATCATCAACAACGT+CGG + chr3_4:67802368-67802387 None:intergenic 45.0%
ATTCTTCTAATGGGGCCAAC+AGG - chr3_4:67802412-67802431 Msa0516310:intron 45.0%
AAGTACGTCGAGAGTGGAAA+TGG + chr3_4:67802458-67802477 None:intergenic 45.0%
TTCCACTCTCGACGTACTTA+TGG - chr3_4:67802459-67802478 Msa0516310:intron 45.0%
AACCATAAGTACGTCGAGAG+TGG + chr3_4:67802464-67802483 None:intergenic 45.0%
ACTGGTTGCCATGAGAAATG+AGG + chr3_4:67802712-67802731 None:intergenic 45.0%
TACTTGCCAAAACCTTGGCT+AGG - chr3_4:67802777-67802796 Msa0516310:intron 45.0%
CTTATCCCACTAAGTGGAGT+CGG + chr3_4:67802990-67803009 None:intergenic 45.0%
!! AAAGCACCGAAAGTACCTCA+TGG - chr3_4:67803234-67803253 Msa0516310:intron 45.0%
! CACTTCCTTTTCTAGGTGGT+TGG - chr3_4:67803263-67803282 Msa0516310:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG - chr3_4:67803528-67803547 Msa0516310:intron 45.0%
CAGTAACATGGGTCGTGTTT+GGG + chr3_4:67803714-67803733 None:intergenic 45.0%
ACAGTAACATGGGTCGTGTT+TGG + chr3_4:67803715-67803734 None:intergenic 45.0%
AGTAGAGATGTCTCTGGTGA+AGG - chr3_4:67804120-67804139 Msa0516310:intron 45.0%
GGCATTACTGAAGATGCTTG+AGG - chr3_4:67804152-67804171 Msa0516310:intron 45.0%
ACTGAAGATGCTTGAGGGAA+CGG - chr3_4:67804158-67804177 Msa0516310:intron 45.0%
TCTCGGGAACATTGACAATC+TGG + chr3_4:67804356-67804375 None:intergenic 45.0%
GATTGTCAATGTTCCCGAGA+AGG - chr3_4:67804356-67804375 Msa0516310:CDS 45.0%
TCCGAGAGGTGACAATATTC+AGG - chr3_4:67804392-67804411 Msa0516310:intron 45.0%
TGTATCTGTGCACTCTGGAT+TGG - chr3_4:67804585-67804604 Msa0516310:CDS 45.0%
AGGCGCCAAGATTCTTCTAT+TGG - chr3_4:67804857-67804876 Msa0516310:intron 45.0%
ACCTGTACGTGCAAAGATGA+AGG - chr3_4:67804889-67804908 Msa0516310:intron 45.0%
GGAAACCGTCCAACAAATTC+AGG + chr3_4:67805102-67805121 None:intergenic 45.0%
!! TTGGTTGGTGAGGAATTCAG+AGG - chr3_4:67805312-67805331 Msa0516310:intron 45.0%
!! TGGTTGGTGAGGAATTCAGA+GGG - chr3_4:67805313-67805332 Msa0516310:intron 45.0%
TCTCAGTGTGCAACAGCATT+CGG - chr3_4:67805345-67805364 Msa0516310:CDS 45.0%
!! AAGCACTCTTTGGTTCTGTG+AGG + chr3_4:67805519-67805538 None:intergenic 45.0%
ACAAGGAATTAGGAGCCTTG+TGG + chr3_4:67805588-67805607 None:intergenic 45.0%
GCTTCCCGTGCTTAAACTAT+TGG + chr3_4:67805638-67805657 None:intergenic 45.0%
! AGTTAATCCAAACGGGCTCT+AGG - chr3_4:67805852-67805871 Msa0516310:intron 45.0%
AGGCTTTCTTGGGATGGAAA+TGG - chr3_4:67806012-67806031 Msa0516310:intron 45.0%
CATAGTGCGATATGGAGTGA+AGG - chr3_4:67806237-67806256 Msa0516310:intron 45.0%
!! GTTTACTTGCTGTTTGCTGG+TGG - chr3_4:67806426-67806445 Msa0516310:intron 45.0%
GCTTCAATATTGGCCAGTTG+TGG + chr3_4:67806487-67806506 None:intergenic 45.0%
CAACTGGCCAATATTGAAGC+AGG - chr3_4:67806487-67806506 Msa0516310:intron 45.0%
CAGATACCCGATATCAGAAC+AGG - chr3_4:67806750-67806769 Msa0516310:CDS 45.0%
ATCGTCGCCTGTTCTGATAT+CGG + chr3_4:67806760-67806779 None:intergenic 45.0%
! GTTGTTGATGAAGACTCCGT+TGG - chr3_4:67806795-67806814 Msa0516310:CDS 45.0%
GCGCTAAAATCCTTTATGGC+AGG - chr3_4:67806838-67806857 Msa0516310:CDS 45.0%
TGATTACATGCTGGCCACAA+TGG + chr3_4:67807043-67807062 None:intergenic 45.0%
GCAACGGTTTGATTACATGC+TGG + chr3_4:67807052-67807071 None:intergenic 45.0%
!!! TAGTTTTGGGGCAATACTGG+TGG - chr3_4:67807309-67807328 Msa0516310:five_prime_UTR 45.0%
!! TTTAAATAAACATAAAATAT+AGG + chr3_4:67806347-67806366 None:intergenic 5.0%
!!! ATTTGTTAAAATAATATAAA+GGG - chr3_4:67807118-67807137 Msa0516310:CDS 5.0%
AGAATCGAGTTTGCGGTTGC+GGG + chr3_4:67801433-67801452 None:intergenic 50.0%
GAGAATCGAGTTTGCGGTTG+CGG + chr3_4:67801434-67801453 None:intergenic 50.0%
TTCAAACCCCTTTCTCTCCG+CGG - chr3_4:67801755-67801774 Msa0516310:intron 50.0%
GGCGGCGATTTCATCCATAA+GGG - chr3_4:67801776-67801795 Msa0516310:intron 50.0%
TTGGAAGTGGAGGCAGTAGA+AGG + chr3_4:67801818-67801837 None:intergenic 50.0%
!! TTCGACAAGGGTGTTGGAAG+TGG + chr3_4:67801831-67801850 None:intergenic 50.0%
! AGAGTCTTCGACAAGGGTGT+TGG + chr3_4:67801837-67801856 None:intergenic 50.0%
GATCCTCCTGAAGTTTGGTC+TGG - chr3_4:67801923-67801942 Msa0516310:CDS 50.0%
! GGTGGAATTGTTGTTCGTCC+TGG - chr3_4:67801947-67801966 Msa0516310:CDS 50.0%
!! TCGAAAGATTGGTGTTGGGG+TGG - chr3_4:67802043-67802062 Msa0516310:intron 50.0%
!! CGAAAGATTGGTGTTGGGGT+GGG - chr3_4:67802044-67802063 Msa0516310:intron 50.0%
GTGTTGGGGTGGGTCTAATA+TGG - chr3_4:67802054-67802073 Msa0516310:intron 50.0%
TGGACAAGAAAGGGCCAAGA+AGG - chr3_4:67802132-67802151 Msa0516310:intron 50.0%
TGCCACAGATAGCACCTTCT+TGG + chr3_4:67802149-67802168 None:intergenic 50.0%
GGCCAACAGGATCAGGTAAA+CGG - chr3_4:67802425-67802444 Msa0516310:intron 50.0%
GCCAACAGGATCAGGTAAAC+GGG - chr3_4:67802426-67802445 Msa0516310:intron 50.0%
ACCCGTTTACCTGATCCTGT+TGG + chr3_4:67802430-67802449 None:intergenic 50.0%
ATGGGGGAGGCAATTGAGTT+TGG - chr3_4:67802641-67802660 Msa0516310:CDS 50.0%
TGGGGGAGGCAATTGAGTTT+GGG - chr3_4:67802642-67802661 Msa0516310:CDS 50.0%
AGATGCAACCACACTCACTC+AGG - chr3_4:67802826-67802845 Msa0516310:intron 50.0%
! CTAACTTGCCTGAGTGAGTG+TGG + chr3_4:67802837-67802856 None:intergenic 50.0%
ACTAAGTGGAGTCGGCTACA+TGG + chr3_4:67802982-67803001 None:intergenic 50.0%
! ATGTAGCCGACTCCACTTAG+TGG - chr3_4:67802981-67803000 Msa0516310:intron 50.0%
! TGTAGCCGACTCCACTTAGT+GGG - chr3_4:67802982-67803001 Msa0516310:intron 50.0%
CGACTCCACTTAGTGGGATA+AGG - chr3_4:67802988-67803007 Msa0516310:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr3_4:67802996-67803015 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr3_4:67802993-67803012 Msa0516310:intron 50.0%
ACTCTAACATTGCCCCTTGC+AGG - chr3_4:67803384-67803403 Msa0516310:intron 50.0%
CAACATAACCAGCCTGCAAG+GGG + chr3_4:67803399-67803418 None:intergenic 50.0%
CCAACATAACCAGCCTGCAA+GGG + chr3_4:67803400-67803419 None:intergenic 50.0%
TCCAACATAACCAGCCTGCA+AGG + chr3_4:67803401-67803420 None:intergenic 50.0%
! GTGGTTTTTCTTGGCGCAAC+TGG - chr3_4:67803501-67803520 Msa0516310:intron 50.0%
TCATGTGACTGGAAGGTCAC+AGG - chr3_4:67803535-67803554 Msa0516310:intron 50.0%
AAGGTCACAGGTTCAAGTCC+TGG - chr3_4:67803547-67803566 Msa0516310:intron 50.0%
!! GGTCGTGTTTGGGTTGTCTA+AGG + chr3_4:67803704-67803723 None:intergenic 50.0%
TGTCACCTCTCGGATGCTTT+CGG + chr3_4:67804386-67804405 None:intergenic 50.0%
GAAGAATCTTGGCGCCTGAA+AGG + chr3_4:67804854-67804873 None:intergenic 50.0%
GCCTTCATCTTTGCACGTAC+AGG + chr3_4:67804893-67804912 None:intergenic 50.0%
GTACGTGCAAAGATGAAGGC+TGG - chr3_4:67804893-67804912 Msa0516310:intron 50.0%
TGTGCAACAGCATTCGGATC+TGG - chr3_4:67805351-67805370 Msa0516310:CDS 50.0%
!! CAAACGGGCTCTAGGTCTAT+GGG - chr3_4:67805860-67805879 Msa0516310:intron 50.0%
TGGCAAAGGCTTTCTTGGGA+TGG - chr3_4:67806006-67806025 Msa0516310:intron 50.0%
ATACTGGTGCTCGGGGATTA+CGG - chr3_4:67806134-67806153 Msa0516310:intron 50.0%
AAGGTGTAGCCTCTGATCAG+AGG - chr3_4:67806256-67806275 Msa0516310:intron 50.0%
AGGTGTAGCCTCTGATCAGA+GGG - chr3_4:67806257-67806276 Msa0516310:intron 50.0%
GTTATGCACCCTCTGATCAG+AGG + chr3_4:67806268-67806287 None:intergenic 50.0%
TCGTCGCCTGTTCTGATATC+GGG + chr3_4:67806759-67806778 None:intergenic 50.0%
! GTTGATGAAGACTCCGTTGG+AGG - chr3_4:67806798-67806817 Msa0516310:CDS 50.0%
TTCCAAGGAGAAGAACGGGT+CGG - chr3_4:67806881-67806900 Msa0516310:CDS 50.0%
! TAGACTACGGAGGTTTCTGG+TGG - chr3_4:67806988-67807007 Msa0516310:CDS 50.0%
GACAGAGCTTCCTTCCATTG+TGG - chr3_4:67807026-67807045 Msa0516310:CDS 50.0%
TACATGCTGGCCACAATGGA+AGG + chr3_4:67807039-67807058 None:intergenic 50.0%
! TTTGGGGCAATACTGGTGGA+AGG - chr3_4:67807313-67807332 Msa0516310:five_prime_UTR 50.0%
CGTCAAATGTCCGAGGAGAT+TGG + chr3_4:67807392-67807411 None:intergenic 50.0%
GCGGAGAGAAAGGGGTTTGA+AGG + chr3_4:67801756-67801775 None:intergenic 55.0%
TATGGATGAAATCGCCGCCG+CGG + chr3_4:67801775-67801794 None:intergenic 55.0%
CGGCGGCGATTTCATCCATA+AGG - chr3_4:67801775-67801794 Msa0516310:intron 55.0%
!! GACAAGGGTGTTGGAAGTGG+AGG + chr3_4:67801828-67801847 None:intergenic 55.0%
CCACCAGACCAAACTTCAGG+AGG + chr3_4:67801929-67801948 None:intergenic 55.0%
CCTCCTGAAGTTTGGTCTGG+TGG - chr3_4:67801926-67801945 Msa0516310:CDS 55.0%
CCACCACCAGACCAAACTTC+AGG + chr3_4:67801932-67801951 None:intergenic 55.0%
CCTGAAGTTTGGTCTGGTGG+TGG - chr3_4:67801929-67801948 Msa0516310:CDS 55.0%
!! GATGTTTCTGGTGGTGGTGG+TGG - chr3_4:67801977-67801996 Msa0516310:CDS 55.0%
TGCTGCTAGCTCCGGTGATT+CGG - chr3_4:67802015-67802034 Msa0516310:intron 55.0%
TGGGGTGGGTCTAATATGGG+AGG - chr3_4:67802058-67802077 Msa0516310:intron 55.0%
!! GGCCAAGAAGGTGCTATCTG+TGG - chr3_4:67802144-67802163 Msa0516310:intron 55.0%
CTAATGGGGCCAACAGGATC+AGG - chr3_4:67802418-67802437 Msa0516310:intron 55.0%
TAACATTGCCCCTTGCAGGC+TGG - chr3_4:67803388-67803407 Msa0516310:intron 55.0%
! CCCTTGCAGGCTGGTTATGT+TGG - chr3_4:67803397-67803416 Msa0516310:intron 55.0%
! AAAATGGTGGGACCCCTTCC+CGG - chr3_4:67803618-67803637 Msa0516310:CDS 55.0%
CTAAAGCTCCCGCATACGCA+GGG + chr3_4:67803645-67803664 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + chr3_4:67803646-67803665 None:intergenic 55.0%
! TGCGGGAGCTTTAGTGCACA+AGG - chr3_4:67803651-67803670 Msa0516310:CDS 55.0%
AATGTGGCAGCTGCACAGCA+AGG - chr3_4:67803962-67803981 Msa0516310:intron 55.0%
!! CTCTGGTGAAGGTGTTCAGC+AGG - chr3_4:67804131-67804150 Msa0516310:intron 55.0%
ATGCTTTCGGGCTCCCTTCT+CGG + chr3_4:67804373-67804392 None:intergenic 55.0%
GTCACCTCTCGGATGCTTTC+GGG + chr3_4:67804385-67804404 None:intergenic 55.0%
!! GAAGGCTGGAAGTGTCACAG+AGG - chr3_4:67804907-67804926 Msa0516310:intron 55.0%
CCATAGACCTAGAGCCCGTT+TGG + chr3_4:67805862-67805881 None:intergenic 55.0%
!! CCAAACGGGCTCTAGGTCTA+TGG - chr3_4:67805859-67805878 Msa0516310:intron 55.0%
TACTGGTGCTCGGGGATTAC+GGG - chr3_4:67806135-67806154 Msa0516310:intron 55.0%
TGAAGACTCCGTTGGAGGTG+AGG - chr3_4:67806803-67806822 Msa0516310:CDS 55.0%
CACTGAAGCCTCACCTCCAA+CGG + chr3_4:67806814-67806833 None:intergenic 55.0%
CGAATGCACCCCTGCCATAA+AGG + chr3_4:67806851-67806870 None:intergenic 55.0%
!! GGAGGTTTCTGGTGGTGATC+AGG - chr3_4:67806996-67807015 Msa0516310:CDS 55.0%
CGAGTTTGCGGTTGCGGGAA+GGG + chr3_4:67801428-67801447 None:intergenic 60.0%
TCGAGTTTGCGGTTGCGGGA+AGG + chr3_4:67801429-67801448 None:intergenic 60.0%
CAGCAGCAGCAGCAGCCATA+GGG + chr3_4:67801592-67801611 None:intergenic 60.0%
AAACCCCTTTCTCTCCGCGG+CGG - chr3_4:67801758-67801777 Msa0516310:intron 60.0%
!! GTTTCTGGTGGTGGTGGTGG+AGG - chr3_4:67801980-67801999 Msa0516310:CDS 60.0%
!! GGTAGTGGTGCTGCTAGCTC+CGG - chr3_4:67802007-67802026 Msa0516310:intron 60.0%
GCTGCTAGCTCCGGTGATTC+GGG - chr3_4:67802016-67802035 Msa0516310:intron 60.0%
CTGCTAGCTCCGGTGATTCG+GGG - chr3_4:67802017-67802036 Msa0516310:intron 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr3_4:67803619-67803638 None:intergenic 60.0%
TGCTTTCGGGCTCCCTTCTC+GGG + chr3_4:67804372-67804391 None:intergenic 60.0%
GGAGGTGAGGCTTCAGTGAG+AGG - chr3_4:67806816-67806835 Msa0516310:CDS 60.0%
CTCCGACCCGTTCTTCTCCT+TGG + chr3_4:67806886-67806905 None:intergenic 60.0%
CAAGGAGAAGAACGGGTCGG+AGG - chr3_4:67806884-67806903 Msa0516310:CDS 60.0%
GCAGCAGCAGCAGCAGCCAT+AGG + chr3_4:67801593-67801612 None:intergenic 65.0%
ATCGCCGCCGCGGAGAGAAA+GGG + chr3_4:67801765-67801784 None:intergenic 65.0%
AATCGCCGCCGCGGAGAGAA+AGG + chr3_4:67801766-67801785 None:intergenic 65.0%
!! TCTGGTGGTGGTGGTGGAGG+AGG - chr3_4:67801983-67802002 Msa0516310:intron 65.0%
!! GGTGGTGGAGGAGGTGGTAG+TGG - chr3_4:67801992-67802011 Msa0516310:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr3_4:67803633-67803652 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr3_4:67803634-67803653 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr3_4:67803633-67803652 Msa0516310:CDS 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr3_4:67803634-67803653 Msa0516310:CDS 65.0%
!! GGAGCCCGAAAGCATCCGAG+AGG - chr3_4:67804378-67804397 Msa0516310:CDS 65.0%
TCGCCGCCGCGGAGAGAAAG+GGG + chr3_4:67801764-67801783 None:intergenic 70.0%
!! GGTGGTGGTGGTGGAGGAGG+TGG - chr3_4:67801986-67802005 Msa0516310:intron 70.0%
CGCATACGCAGGGTCCGGGA+AGG + chr3_4:67803635-67803654 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr3_4:67803639-67803658 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr3_4:67803640-67803659 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 67801314 67807440 67801314 ID=Msa0516310;Name=Msa0516310
chr3_4 mRNA 67801314 67807440 67801314 ID=Msa0516310-mRNA-1;Parent=Msa0516310;Name=Msa0516310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=279|0.84|0.85|1|0.84|0.85|14|381|577
chr3_4 exon 67801314 67801763 67801314 ID=Msa0516310-mRNA-1:exon:17789;Parent=Msa0516310-mRNA-1
chr3_4 exon 67801849 67802001 67801849 ID=Msa0516310-mRNA-1:exon:17788;Parent=Msa0516310-mRNA-1
chr3_4 exon 67802559 67802681 67802559 ID=Msa0516310-mRNA-1:exon:17787;Parent=Msa0516310-mRNA-1
chr3_4 exon 67803178 67803240 67803178 ID=Msa0516310-mRNA-1:exon:17786;Parent=Msa0516310-mRNA-1
chr3_4 exon 67803587 67803691 67803587 ID=Msa0516310-mRNA-1:exon:17785;Parent=Msa0516310-mRNA-1
chr3_4 exon 67803796 67803895 67803796 ID=Msa0516310-mRNA-1:exon:17784;Parent=Msa0516310-mRNA-1
chr3_4 exon 67803989 67804059 67803989 ID=Msa0516310-mRNA-1:exon:17783;Parent=Msa0516310-mRNA-1
chr3_4 exon 67804341 67804397 67804341 ID=Msa0516310-mRNA-1:exon:17782;Parent=Msa0516310-mRNA-1
chr3_4 exon 67804575 67804652 67804575 ID=Msa0516310-mRNA-1:exon:17781;Parent=Msa0516310-mRNA-1
chr3_4 exon 67804730 67804804 67804730 ID=Msa0516310-mRNA-1:exon:17780;Parent=Msa0516310-mRNA-1
chr3_4 exon 67805345 67805376 67805345 ID=Msa0516310-mRNA-1:exon:17779;Parent=Msa0516310-mRNA-1
chr3_4 exon 67805903 67805986 67805903 ID=Msa0516310-mRNA-1:exon:17778;Parent=Msa0516310-mRNA-1
chr3_4 exon 67806315 67806421 67806315 ID=Msa0516310-mRNA-1:exon:17777;Parent=Msa0516310-mRNA-1
chr3_4 exon 67806545 67807440 67806545 ID=Msa0516310-mRNA-1:exon:17776;Parent=Msa0516310-mRNA-1
chr3_4 five_prime_UTR 67807162 67807440 67807162 ID=Msa0516310-mRNA-1:five_prime_utr;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67806545 67807161 67806545 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67806315 67806421 67806315 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67805903 67805986 67805903 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67805345 67805376 67805345 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67804730 67804804 67804730 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67804575 67804652 67804575 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67804341 67804397 67804341 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67803989 67804059 67803989 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67803796 67803895 67803796 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67803587 67803691 67803587 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67803178 67803240 67803178 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67802559 67802681 67802559 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67801849 67802001 67801849 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 CDS 67801695 67801763 67801695 ID=Msa0516310-mRNA-1:cds;Parent=Msa0516310-mRNA-1
chr3_4 three_prime_UTR 67801314 67801694 67801314 ID=Msa0516310-mRNA-1:three_prime_utr;Parent=Msa0516310-mRNA-1
Gene Sequence

>Msa0516310

ATGGCTGCTGCTGCTGCTGCGTTTCGATCAAAACCTTCAAAGGAAAAAGCAACCCTCGCGTTATCTCAATTACGCTACTTCGCATTCAATTACACACACGCTGGTCACTCACACTCTCCACCACGTTCACCGTTAATCAACACCCCTTATCACTTCACTTCCTTCAAACCCCTTTCTCTCCGCGGCGGCGATTTCATCCATAAGGGTAGTAGTAATACTACTCCTTCTACTGCCTCCACTTCCAACACCCTTGTCGAAGACTCTAATCAAAACCCTAATCATGTTCCTTATGATGTAACCGCTTATAGGGTTCTTGTTTCTTCCTTTGTTGATCCTCCTGAAGTTTGGTCTGGTGGTGGAATTGTTGTTCGTCCTGGGAATTATGATGTTTCTGGTGGTGGTGGTGGAGGAGGTGGTAGTGGTGCTGCTAGCTCCGGTGATTCGGGGAATTCGAAAGATTGGTGTTGGGGTGGGTCTAATATGGGAGGTAGTTTTCCTACTCCAAAGGAGATTTGTAAAGGGCTTGATAAACATGTAATTGGACAAGAAAGGGCCAAGAAGGTGCTATCTGTGGCAGTCTATAATCACTATAAGAGAATATATCATGAAAAGTTGTGGCATGCAGGAGATTCAAATATTGATGGTAAAGCCGACGTTGTTGATGATGACGACGATGTTGAACTTGAGAAAAGCAATATTCTTCTAATGGGGCCAACAGGATCAGGGAAGACATTACTTGCCAAAACCTTGGCTAGGTTTGTAAATGTTCCCTTTGTTATTGCAGATGCAACCACACTCACTCAGGCAAGTCTTAACTCTAACATTGCCCCTTGCAGGCTGGCTGCAGATTATAATGTGGCAGCTGCACAGCAAGGCATTGTTTACATTGATGAAGTTGACAAGATTACCAAAAAGGCCGAGAGCCTTAATATCAGTAGAGATGTCTCTGGTGAAGGTGTTCAGCAGGCATTACTGAAGATGCTTGAGGGAACGATTGTCAATGTTCCCGAGAAGGGAGCCCGAAAGCATCCGAGAGGTGACAATATTCAGATTGACACCAAGAATATACTTTTCATCTGCGGAGGAGCCTTCATTGACTTAGAGAAAACAATTTCGGAAAGGCGCCAAGATTCTTCTATTGGATTTGGAGCACCTGTACGTGCAAAGATGAAGGCTGGAAGTGTCACAGAGGCTGCAATTGCATCATCATTATTAGGAACTGTTGAAAGCAGTGATCTTATAGCATATGGTTTAATACCTGAATTTGTTGGACGGTTTCCTATTCTTGTTAGTCTGTCAGCGTTAACTGAAAATCAACTCATTCAGGTCCTCACAGAACCAAAGAGTGCTTTAGAGAAGCAATACAAGAAGACATTCCAAATTAATGGAGTGAAACTACATTTTACGGAAAGCGCTCGCAAGTCAATTGCAAGACAAGCAATGTCTAAAAATACTGGTGCTCGGGGATTACGGGCAATAATAGAGAGTATTTTGGTAGATGCCATGTATGAGATACCCGATATCAGAACAGGCGACGATGTTATAGATGCTGTTGTTGTTGATGAAGACTCCGTTGGAGGTGAGGCTTCAGTGAGAGGCGCTAAAATCCTTTATGGCAGGGGTGCATTCGATCGTTATCTTTCCAAGGAGAAGAACGGGTCGGAGACTACGGAGGTTTCTGGTGGTGATCAGGAAGCAGAGACAGAGCTTCCTTCCATTGTGGCCAGCATGTAA
Protein sequence

>Msa0516310

MAAAAAAFRSKPSKEKATLALSQLRYFAFNYTHAGHSHSPPRSPLINTPYHFTSFKPLSLRGGDFIHKGSSNTTPSTASTSNTLVEDSNQNPNHVPYDVTAYRVLVSSFVDPPEVWSGGGIVVRPGNYDVSGGGGGGGGSGAASSGDSGNSKDWCWGGSNMGGSFPTPKEICKGLDKHVIGQERAKKVLSVAVYNHYKRIYHEKLWHAGDSNIDGKADVVDDDDDVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQASLNSNIAPCRLAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRAKMKAGSVTEAAIASSLLGTVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKSALEKQYKKTFQINGVKLHFTESARKSIARQAMSKNTGARGLRAIIESILVDAMYEIPDIRTGDDVIDAVVVDEDSVGGEASVRGAKILYGRGAFDRYLSKEKNGSETTEVSGGDQEAETELPSIVASM*