Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401210 | RHN76407.1 | 91.246 | 297 | 26 | 0 | 1 | 297 | 140 | 436 | 0.0 | 536 |
| Msa1401210 | RHN76407.1 | 92.537 | 67 | 5 | 0 | 216 | 282 | 17 | 83 | 1.00e-30 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401210 | sp|Q9CA93|BAC2_ARATH | 59.732 | 298 | 107 | 4 | 1 | 297 | 1 | 286 | 7.47e-110 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401210 | A0A396JMZ9 | 91.246 | 297 | 26 | 0 | 1 | 297 | 140 | 436 | 0.0 | 536 |
| Msa1401210 | A0A396JMZ9 | 92.537 | 67 | 5 | 0 | 216 | 282 | 17 | 83 | 4.79e-31 | 130 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa1401210 | 0.803594 | 3.235162e-49 | -8.615850e-47 |
| Msa1371540 | Msa1401210 | 0.819183 | 1.327976e-52 | -8.615850e-47 |
| Msa1373310 | Msa1401210 | 0.804718 | 1.888569e-49 | -8.615850e-47 |
| Msa1397190 | Msa1401210 | 0.983141 | 6.117332e-157 | -8.615850e-47 |
| Msa1401210 | Msa1434850 | 0.800447 | 1.435458e-48 | -8.615850e-47 |
| Msa0617470 | Msa1401210 | 0.807185 | 5.719136e-50 | -8.615850e-47 |
| Msa0625900 | Msa1401210 | 0.804672 | 1.930829e-49 | -8.615850e-47 |
| Msa0663580 | Msa1401210 | 0.818003 | 2.458219e-52 | -8.615850e-47 |
| Msa0663690 | Msa1401210 | 0.806625 | 7.510417e-50 | -8.615850e-47 |
| Msa0677140 | Msa1401210 | 0.817268 | 3.600712e-52 | -8.615850e-47 |
| Msa0700250 | Msa1401210 | 0.808150 | 3.566901e-50 | -8.615850e-47 |
| Msa0750490 | Msa1401210 | 0.802899 | 4.507342e-49 | -8.615850e-47 |
| Msa0138340 | Msa1401210 | 0.817479 | 3.227430e-52 | -8.615850e-47 |
| Msa0147960 | Msa1401210 | 0.819780 | 9.701836e-53 | -8.615850e-47 |
| Msa0194750 | Msa1401210 | 0.804936 | 1.700138e-49 | -8.615850e-47 |
| Msa0225530 | Msa1401210 | 0.961176 | 2.122370e-119 | -8.615850e-47 |
| Msa0232170 | Msa1401210 | 0.803336 | 3.659416e-49 | -8.615850e-47 |
| Msa1251500 | Msa1401210 | -0.803087 | 4.120539e-49 | -8.615850e-47 |
| Msa1251950 | Msa1401210 | 0.825848 | 3.746652e-54 | -8.615850e-47 |
| Msa1316090 | Msa1401210 | 0.802214 | 6.239531e-49 | -8.615850e-47 |
| Msa0527210 | Msa1401210 | 0.815018 | 1.145840e-51 | -8.615850e-47 |
| Msa0563230 | Msa1401210 | 0.830755 | 2.455800e-55 | -8.615850e-47 |
| Msa0585720 | Msa1401210 | 0.813402 | 2.606851e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401210 | MtrunA17_Chr2g0331771 | 91.246 | 297 | 26 | 0 | 1 | 297 | 140 | 436 | 0.0 | 536 |
| Msa1401210 | MtrunA17_Chr2g0331771 | 92.537 | 67 | 5 | 0 | 216 | 282 | 17 | 83 | 9.22e-35 | 130 |
| Msa1401210 | MtrunA17_Chr4g0004571 | 62.081 | 298 | 109 | 4 | 1 | 297 | 1 | 295 | 8.41e-135 | 384 |
| Msa1401210 | MtrunA17_Chr8g0366791 | 36.213 | 301 | 173 | 6 | 9 | 294 | 1 | 297 | 4.83e-47 | 159 |
| Msa1401210 | MtrunA17_Chr5g0411411 | 33.887 | 301 | 180 | 6 | 9 | 294 | 1 | 297 | 2.93e-44 | 152 |
| Msa1401210 | MtrunA17_Chr4g0046981 | 28.328 | 293 | 195 | 5 | 15 | 294 | 10 | 300 | 1.98e-28 | 110 |
| Msa1401210 | MtrunA17_Chr8g0385571 | 29.242 | 277 | 188 | 4 | 15 | 288 | 225 | 496 | 4.66e-27 | 110 |
| Msa1401210 | MtrunA17_Chr8g0385571 | 29.688 | 192 | 118 | 7 | 14 | 196 | 319 | 502 | 1.12e-14 | 73.9 |
| Msa1401210 | MtrunA17_Chr3g0131501 | 26.429 | 280 | 198 | 4 | 12 | 288 | 200 | 474 | 7.68e-24 | 100 |
| Msa1401210 | MtrunA17_Chr3g0131501 | 28.814 | 177 | 116 | 3 | 93 | 269 | 190 | 356 | 1.03e-13 | 71.2 |
| Msa1401210 | MtrunA17_Chr4g0028531 | 31.734 | 271 | 163 | 9 | 18 | 275 | 23 | 284 | 4.02e-23 | 97.1 |
| Msa1401210 | MtrunA17_Chr1g0201361 | 30.038 | 263 | 148 | 9 | 18 | 274 | 52 | 284 | 8.18e-23 | 95.9 |
| Msa1401210 | MtrunA17_Chr7g0252401 | 27.083 | 288 | 189 | 7 | 15 | 294 | 205 | 479 | 4.26e-22 | 95.9 |
| Msa1401210 | MtrunA17_Chr7g0252401 | 23.232 | 198 | 136 | 5 | 5 | 196 | 292 | 479 | 9.35e-12 | 65.1 |
| Msa1401210 | MtrunA17_Chr6g0463351 | 29.286 | 280 | 140 | 8 | 32 | 286 | 82 | 328 | 4.70e-22 | 94.7 |
| Msa1401210 | MtrunA17_Chr1g0196921 | 23.735 | 257 | 180 | 5 | 30 | 275 | 27 | 278 | 1.48e-20 | 89.7 |
| Msa1401210 | MtrunA17_Chr1g0196921 | 27.976 | 168 | 111 | 3 | 126 | 288 | 30 | 192 | 7.38e-13 | 67.8 |
| Msa1401210 | MtrunA17_Chr3g0137941 | 30.270 | 185 | 117 | 3 | 104 | 288 | 117 | 289 | 1.07e-19 | 88.6 |
| Msa1401210 | MtrunA17_Chr3g0137941 | 22.727 | 286 | 209 | 5 | 15 | 297 | 120 | 396 | 6.66e-15 | 74.3 |
| Msa1401210 | MtrunA17_Chr7g0240341 | 33.511 | 188 | 115 | 5 | 112 | 292 | 28 | 212 | 1.29e-19 | 87.4 |
| Msa1401210 | MtrunA17_Chr7g0240341 | 24.088 | 274 | 180 | 8 | 16 | 269 | 24 | 289 | 1.62e-13 | 69.7 |
| Msa1401210 | MtrunA17_Chr8g0383321 | 29.433 | 282 | 164 | 10 | 23 | 297 | 55 | 308 | 1.57e-19 | 87.0 |
| Msa1401210 | MtrunA17_Chr8g0386871 | 29.893 | 281 | 160 | 10 | 23 | 288 | 323 | 581 | 4.90e-19 | 87.0 |
| Msa1401210 | MtrunA17_Chr1g0149111 | 29.213 | 178 | 115 | 2 | 111 | 288 | 140 | 306 | 5.88e-19 | 86.3 |
| Msa1401210 | MtrunA17_Chr1g0149111 | 25.000 | 296 | 198 | 9 | 9 | 295 | 131 | 411 | 2.14e-14 | 73.2 |
| Msa1401210 | MtrunA17_Chr3g0135861 | 25.253 | 297 | 195 | 7 | 15 | 289 | 33 | 324 | 1.71e-18 | 84.3 |
| Msa1401210 | MtrunA17_Chr4g0063561 | 28.902 | 173 | 112 | 4 | 102 | 274 | 116 | 277 | 5.19e-18 | 83.6 |
| Msa1401210 | MtrunA17_Chr4g0063561 | 23.158 | 285 | 209 | 4 | 15 | 297 | 121 | 397 | 3.80e-16 | 78.2 |
| Msa1401210 | MtrunA17_Chr6g0455381 | 23.569 | 297 | 201 | 8 | 19 | 297 | 21 | 309 | 9.00e-18 | 82.0 |
| Msa1401210 | MtrunA17_Chr6g0455381 | 29.101 | 189 | 120 | 7 | 114 | 294 | 19 | 201 | 1.23e-13 | 70.1 |
| Msa1401210 | MtrunA17_Chr6g0455381 | 29.885 | 174 | 97 | 7 | 18 | 172 | 115 | 282 | 3.19e-11 | 63.2 |
| Msa1401210 | MtrunA17_Chr7g0269701 | 34.826 | 201 | 119 | 5 | 97 | 288 | 3 | 200 | 9.61e-18 | 82.0 |
| Msa1401210 | MtrunA17_Chr7g0269701 | 26.990 | 289 | 193 | 8 | 23 | 297 | 25 | 309 | 8.23e-17 | 79.3 |
| Msa1401210 | MtrunA17_Chr4g0008061 | 24.818 | 274 | 179 | 7 | 12 | 269 | 10 | 272 | 4.35e-17 | 79.7 |
| Msa1401210 | MtrunA17_Chr4g0008061 | 27.647 | 170 | 115 | 3 | 126 | 288 | 31 | 199 | 3.36e-11 | 62.8 |
| Msa1401210 | MtrunA17_Chr6g0488081 | 31.373 | 204 | 121 | 4 | 97 | 288 | 7 | 203 | 5.30e-17 | 79.7 |
| Msa1401210 | MtrunA17_Chr6g0488081 | 23.022 | 278 | 194 | 6 | 13 | 275 | 15 | 287 | 4.89e-15 | 74.3 |
| Msa1401210 | MtrunA17_Chr8g0378951 | 25.806 | 279 | 189 | 6 | 15 | 284 | 19 | 288 | 1.38e-16 | 78.6 |
| Msa1401210 | MtrunA17_Chr8g0378951 | 26.087 | 184 | 121 | 3 | 113 | 292 | 24 | 196 | 6.77e-12 | 65.1 |
| Msa1401210 | MtrunA17_Chr5g0431531 | 27.969 | 261 | 166 | 6 | 18 | 268 | 40 | 288 | 1.75e-16 | 78.6 |
| Msa1401210 | MtrunA17_Chr5g0431531 | 28.125 | 224 | 142 | 5 | 74 | 294 | 5 | 212 | 4.83e-16 | 77.0 |
| Msa1401210 | MtrunA17_Chr7g0241521 | 23.881 | 268 | 179 | 6 | 17 | 269 | 17 | 274 | 8.37e-16 | 76.3 |
| Msa1401210 | MtrunA17_Chr1g0195101 | 27.208 | 283 | 175 | 9 | 33 | 296 | 35 | 305 | 1.73e-15 | 75.5 |
| Msa1401210 | MtrunA17_Chr5g0423111 | 27.178 | 287 | 168 | 10 | 33 | 295 | 37 | 306 | 2.24e-15 | 75.5 |
| Msa1401210 | MtrunA17_Chr5g0423111 | 33.333 | 171 | 101 | 6 | 123 | 288 | 34 | 196 | 2.82e-12 | 66.2 |
| Msa1401210 | MtrunA17_Chr8g0343381 | 24.585 | 301 | 191 | 7 | 32 | 297 | 48 | 347 | 2.86e-15 | 75.1 |
| Msa1401210 | MtrunA17_Chr5g0396801 | 31.250 | 160 | 98 | 4 | 116 | 268 | 44 | 198 | 2.91e-15 | 75.1 |
| Msa1401210 | MtrunA17_Chr5g0396801 | 24.430 | 307 | 191 | 9 | 15 | 289 | 36 | 333 | 4.98e-14 | 71.6 |
| Msa1401210 | MtrunA17_Chr8g0347451 | 30.818 | 159 | 100 | 4 | 116 | 268 | 57 | 211 | 5.24e-15 | 74.3 |
| Msa1401210 | MtrunA17_Chr8g0347451 | 23.642 | 313 | 208 | 9 | 5 | 289 | 39 | 348 | 3.27e-13 | 69.3 |
| Msa1401210 | MtrunA17_Chr8g0367641 | 27.703 | 296 | 169 | 12 | 17 | 275 | 6 | 293 | 7.32e-15 | 73.6 |
| Msa1401210 | MtrunA17_Chr5g0436041 | 29.518 | 166 | 108 | 3 | 103 | 260 | 24 | 188 | 8.37e-15 | 73.6 |
| Msa1401210 | MtrunA17_Chr7g0219891 | 23.197 | 319 | 211 | 12 | 3 | 297 | 5 | 313 | 8.38e-15 | 73.6 |
| Msa1401210 | MtrunA17_Chr3g0103681 | 24.567 | 289 | 192 | 7 | 12 | 284 | 10 | 288 | 1.68e-14 | 72.4 |
| Msa1401210 | MtrunA17_Chr2g0293621 | 26.154 | 195 | 133 | 3 | 110 | 296 | 130 | 321 | 2.92e-14 | 72.0 |
| Msa1401210 | MtrunA17_Chr3g0088301 | 24.915 | 293 | 202 | 7 | 16 | 295 | 92 | 379 | 4.83e-14 | 72.0 |
| Msa1401210 | MtrunA17_Chr2g0328891 | 26.786 | 168 | 118 | 3 | 122 | 288 | 183 | 346 | 9.54e-14 | 70.9 |
| Msa1401210 | MtrunA17_Chr3g0086811 | 26.132 | 287 | 172 | 9 | 15 | 268 | 26 | 305 | 9.80e-14 | 70.9 |
| Msa1401210 | MtrunA17_Chr3g0086811 | 29.570 | 186 | 101 | 5 | 113 | 275 | 31 | 209 | 6.76e-12 | 65.5 |
| Msa1401210 | MtrunA17_Chr5g0412401 | 26.174 | 298 | 178 | 10 | 17 | 275 | 6 | 300 | 1.42e-13 | 70.1 |
| Msa1401210 | MtrunA17_Chr8g0352031 | 30.657 | 137 | 91 | 2 | 152 | 288 | 217 | 349 | 4.29e-13 | 68.9 |
| Msa1401210 | MtrunA17_Chr2g0296061 | 26.263 | 198 | 129 | 5 | 17 | 197 | 128 | 325 | 9.30e-13 | 67.8 |
| Msa1401210 | MtrunA17_Chr2g0296061 | 21.698 | 318 | 189 | 10 | 19 | 290 | 17 | 320 | 4.39e-11 | 62.8 |
| Msa1401210 | MtrunA17_Chr1g0196161 | 29.677 | 155 | 99 | 4 | 116 | 268 | 3 | 149 | 1.06e-12 | 65.5 |
| Msa1401210 | MtrunA17_Chr4g0051841 | 25.417 | 240 | 158 | 6 | 17 | 243 | 29 | 260 | 5.05e-12 | 65.5 |
| Msa1401210 | MtrunA17_Chr3g0133111 | 28.495 | 186 | 107 | 6 | 126 | 288 | 22 | 204 | 5.63e-12 | 65.1 |
| Msa1401210 | MtrunA17_Chr3g0133111 | 27.749 | 191 | 127 | 5 | 113 | 297 | 127 | 312 | 8.36e-12 | 64.7 |
| Msa1401210 | MtrunA17_Chr4g0067231 | 27.513 | 189 | 119 | 4 | 104 | 275 | 4 | 191 | 8.91e-12 | 64.7 |
| Msa1401210 | MtrunA17_Chr4g0067231 | 23.737 | 198 | 134 | 4 | 17 | 197 | 129 | 326 | 7.24e-11 | 62.0 |
| Msa1401210 | MtrunA17_Chr8g0393031 | 24.254 | 268 | 182 | 7 | 24 | 274 | 22 | 285 | 1.59e-11 | 63.9 |
| Msa1401210 | MtrunA17_Chr8g0372531 | 31.892 | 185 | 100 | 9 | 124 | 296 | 28 | 198 | 2.58e-11 | 63.2 |
| Msa1401210 | MtrunA17_Chr4g0040341 | 27.778 | 144 | 100 | 2 | 145 | 288 | 216 | 355 | 6.69e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401210 | AT1G79900.1 | 59.732 | 298 | 107 | 4 | 1 | 297 | 1 | 286 | 7.59e-111 | 323 |
| Msa1401210 | AT5G46800.2 | 33.663 | 303 | 179 | 7 | 10 | 294 | 1 | 299 | 2.57e-42 | 147 |
| Msa1401210 | AT5G46800.3 | 33.663 | 303 | 179 | 7 | 10 | 294 | 1 | 299 | 2.57e-42 | 147 |
| Msa1401210 | AT5G46800.1 | 33.663 | 303 | 179 | 7 | 10 | 294 | 1 | 299 | 2.57e-42 | 147 |
| Msa1401210 | AT2G33820.1 | 28.669 | 293 | 194 | 5 | 15 | 294 | 16 | 306 | 6.17e-32 | 120 |
| Msa1401210 | AT2G33820.3 | 27.907 | 301 | 194 | 6 | 15 | 294 | 16 | 314 | 4.45e-29 | 113 |
| Msa1401210 | AT1G34065.1 | 32.075 | 265 | 142 | 9 | 13 | 270 | 78 | 311 | 4.14e-24 | 100 |
| Msa1401210 | AT1G34065.2 | 32.075 | 265 | 142 | 9 | 13 | 270 | 71 | 304 | 4.28e-24 | 100 |
| Msa1401210 | AT2G33820.2 | 29.333 | 225 | 151 | 4 | 76 | 294 | 3 | 225 | 3.78e-23 | 95.5 |
| Msa1401210 | AT4G32400.1 | 33.516 | 182 | 109 | 3 | 111 | 292 | 115 | 284 | 3.92e-22 | 95.5 |
| Msa1401210 | AT4G32400.1 | 25.606 | 289 | 197 | 8 | 15 | 297 | 112 | 388 | 1.38e-18 | 85.5 |
| Msa1401210 | AT5G19760.1 | 28.674 | 279 | 181 | 6 | 15 | 284 | 16 | 285 | 4.72e-22 | 94.0 |
| Msa1401210 | AT5G19760.1 | 26.562 | 192 | 120 | 4 | 113 | 297 | 21 | 198 | 1.66e-13 | 70.1 |
| Msa1401210 | AT5G01340.1 | 29.478 | 268 | 174 | 7 | 18 | 275 | 18 | 280 | 7.01e-22 | 93.6 |
| Msa1401210 | AT2G33820.4 | 27.679 | 224 | 148 | 4 | 15 | 225 | 16 | 238 | 2.11e-21 | 91.7 |
| Msa1401210 | AT2G33820.4 | 27.807 | 187 | 119 | 6 | 111 | 288 | 19 | 198 | 3.51e-11 | 62.8 |
| Msa1401210 | AT4G39460.2 | 29.123 | 285 | 170 | 10 | 17 | 297 | 58 | 314 | 6.39e-21 | 91.3 |
| Msa1401210 | AT4G39460.1 | 29.123 | 285 | 170 | 10 | 17 | 297 | 58 | 314 | 6.39e-21 | 91.3 |
| Msa1401210 | AT4G39460.3 | 29.123 | 285 | 170 | 10 | 17 | 297 | 58 | 314 | 6.39e-21 | 91.3 |
| Msa1401210 | AT3G54110.1 | 26.471 | 272 | 177 | 7 | 12 | 269 | 10 | 272 | 4.52e-20 | 88.6 |
| Msa1401210 | AT3G54110.1 | 27.933 | 179 | 122 | 3 | 116 | 288 | 21 | 198 | 1.58e-12 | 67.4 |
| Msa1401210 | AT4G11440.1 | 28.028 | 289 | 174 | 8 | 15 | 288 | 328 | 597 | 9.12e-20 | 89.7 |
| Msa1401210 | AT4G11440.2 | 28.028 | 289 | 174 | 8 | 15 | 288 | 328 | 597 | 9.12e-20 | 89.7 |
| Msa1401210 | AT3G55640.2 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 5.74e-19 | 84.7 |
| Msa1401210 | AT3G55640.3 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 5.74e-19 | 84.7 |
| Msa1401210 | AT1G14140.1 | 24.907 | 269 | 161 | 9 | 31 | 275 | 30 | 281 | 1.21e-18 | 84.7 |
| Msa1401210 | AT4G03115.1 | 27.237 | 257 | 157 | 8 | 31 | 275 | 52 | 290 | 1.44e-18 | 84.7 |
| Msa1401210 | AT4G03115.3 | 27.237 | 257 | 157 | 8 | 31 | 275 | 84 | 322 | 1.49e-18 | 85.1 |
| Msa1401210 | AT3G55640.1 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 2.38e-18 | 84.3 |
| Msa1401210 | AT3G55640.1 | 32.474 | 194 | 123 | 6 | 1 | 190 | 130 | 319 | 2.97e-16 | 78.2 |
| Msa1401210 | AT3G55640.1 | 26.182 | 275 | 171 | 10 | 16 | 269 | 37 | 300 | 7.03e-15 | 74.3 |
| Msa1401210 | AT3G55640.4 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 2.38e-18 | 84.3 |
| Msa1401210 | AT3G55640.4 | 32.474 | 194 | 123 | 6 | 1 | 190 | 130 | 319 | 2.97e-16 | 78.2 |
| Msa1401210 | AT3G55640.4 | 26.182 | 275 | 171 | 10 | 16 | 269 | 37 | 300 | 7.03e-15 | 74.3 |
| Msa1401210 | AT5G51050.1 | 24.735 | 283 | 198 | 7 | 17 | 294 | 223 | 495 | 4.34e-18 | 84.7 |
| Msa1401210 | AT5G51050.1 | 30.769 | 169 | 107 | 3 | 108 | 274 | 221 | 381 | 1.33e-13 | 71.2 |
| Msa1401210 | AT4G03115.5 | 27.119 | 236 | 148 | 6 | 46 | 275 | 2 | 219 | 1.00e-17 | 80.9 |
| Msa1401210 | AT4G03115.6 | 30.233 | 172 | 106 | 4 | 106 | 275 | 68 | 227 | 1.51e-17 | 80.9 |
| Msa1401210 | AT4G26180.2 | 29.442 | 197 | 121 | 3 | 104 | 288 | 15 | 205 | 2.98e-17 | 80.5 |
| Msa1401210 | AT4G26180.2 | 22.300 | 287 | 193 | 10 | 5 | 269 | 6 | 284 | 4.13e-13 | 68.9 |
| Msa1401210 | AT2G37890.1 | 26.715 | 277 | 169 | 10 | 15 | 269 | 43 | 307 | 4.99e-17 | 80.5 |
| Msa1401210 | AT2G37890.1 | 29.439 | 214 | 136 | 5 | 68 | 274 | 8 | 213 | 2.50e-15 | 75.5 |
| Msa1401210 | AT2G37890.1 | 28.649 | 185 | 125 | 4 | 16 | 196 | 151 | 332 | 6.69e-14 | 71.6 |
| Msa1401210 | AT4G26180.1 | 29.442 | 197 | 121 | 3 | 104 | 288 | 15 | 205 | 5.68e-17 | 80.5 |
| Msa1401210 | AT4G26180.1 | 21.498 | 307 | 211 | 10 | 5 | 289 | 6 | 304 | 4.48e-13 | 68.9 |
| Msa1401210 | AT3G53940.2 | 30.890 | 191 | 112 | 4 | 111 | 289 | 74 | 256 | 8.42e-17 | 79.3 |
| Msa1401210 | AT1G74240.1 | 28.975 | 283 | 166 | 8 | 15 | 268 | 34 | 310 | 9.51e-17 | 80.1 |
| Msa1401210 | AT4G01100.1 | 31.111 | 180 | 114 | 3 | 95 | 268 | 27 | 202 | 1.31e-16 | 79.3 |
| Msa1401210 | AT4G01100.1 | 25.083 | 303 | 196 | 9 | 15 | 289 | 40 | 339 | 3.06e-14 | 72.8 |
| Msa1401210 | AT3G53940.1 | 31.053 | 190 | 111 | 4 | 111 | 288 | 74 | 255 | 2.10e-16 | 79.0 |
| Msa1401210 | AT3G53940.1 | 24.818 | 274 | 178 | 9 | 15 | 269 | 71 | 335 | 2.41e-13 | 70.1 |
| Msa1401210 | AT3G53940.1 | 28.571 | 189 | 120 | 5 | 16 | 196 | 179 | 360 | 6.21e-13 | 68.9 |
| Msa1401210 | AT1G25380.1 | 27.737 | 274 | 178 | 8 | 33 | 292 | 37 | 304 | 3.51e-16 | 78.2 |
| Msa1401210 | AT1G25380.2 | 27.737 | 274 | 178 | 8 | 33 | 292 | 37 | 304 | 3.51e-16 | 78.2 |
| Msa1401210 | AT5G61810.2 | 25.182 | 274 | 191 | 6 | 17 | 288 | 65 | 326 | 3.81e-16 | 78.2 |
| Msa1401210 | AT4G01100.2 | 28.866 | 194 | 114 | 3 | 95 | 268 | 27 | 216 | 4.63e-16 | 78.2 |
| Msa1401210 | AT4G01100.2 | 24.534 | 322 | 198 | 10 | 10 | 289 | 35 | 353 | 8.39e-14 | 71.2 |
| Msa1401210 | AT1G07030.1 | 27.113 | 284 | 164 | 8 | 1 | 268 | 34 | 290 | 8.57e-16 | 77.0 |
| Msa1401210 | AT4G01100.3 | 33.113 | 151 | 91 | 3 | 124 | 268 | 6 | 152 | 9.23e-16 | 76.6 |
| Msa1401210 | AT4G01100.3 | 24.561 | 285 | 184 | 8 | 33 | 289 | 8 | 289 | 4.71e-13 | 68.6 |
| Msa1401210 | AT5G61810.1 | 25.182 | 274 | 191 | 6 | 17 | 288 | 208 | 469 | 1.22e-15 | 77.4 |
| Msa1401210 | AT5G58970.1 | 24.028 | 283 | 190 | 7 | 17 | 284 | 16 | 288 | 1.46e-15 | 75.9 |
| Msa1401210 | AT2G30160.1 | 25.430 | 291 | 163 | 8 | 1 | 268 | 36 | 295 | 2.89e-15 | 75.5 |
| Msa1401210 | AT5G09470.1 | 27.232 | 224 | 152 | 4 | 55 | 275 | 98 | 313 | 3.08e-15 | 75.5 |
| Msa1401210 | AT2G47490.1 | 28.159 | 277 | 181 | 8 | 33 | 297 | 33 | 303 | 6.89e-15 | 73.9 |
| Msa1401210 | AT5G15640.1 | 23.270 | 318 | 215 | 12 | 3 | 297 | 12 | 323 | 9.89e-15 | 73.9 |
| Msa1401210 | AT5G15640.2 | 23.279 | 305 | 206 | 11 | 15 | 297 | 18 | 316 | 1.47e-14 | 73.2 |
| Msa1401210 | AT5G07320.1 | 24.138 | 261 | 184 | 6 | 30 | 288 | 222 | 470 | 2.72e-14 | 73.2 |
| Msa1401210 | AT5G42130.1 | 25.448 | 279 | 178 | 8 | 33 | 297 | 134 | 396 | 4.92e-14 | 72.4 |
| Msa1401210 | AT4G24570.1 | 23.232 | 297 | 183 | 6 | 15 | 275 | 4 | 291 | 8.17e-14 | 70.9 |
| Msa1401210 | AT4G24570.1 | 29.688 | 192 | 103 | 4 | 126 | 288 | 22 | 210 | 8.08e-13 | 68.2 |
| Msa1401210 | AT1G72820.1 | 26.006 | 323 | 205 | 10 | 7 | 297 | 21 | 341 | 1.16e-13 | 70.9 |
| Msa1401210 | AT1G72820.2 | 26.006 | 323 | 205 | 10 | 7 | 297 | 21 | 341 | 1.16e-13 | 70.9 |
| Msa1401210 | AT1G74240.2 | 28.571 | 266 | 155 | 8 | 32 | 268 | 3 | 262 | 1.31e-13 | 70.5 |
| Msa1401210 | AT3G08580.2 | 29.927 | 137 | 92 | 2 | 152 | 288 | 233 | 365 | 2.97e-13 | 69.7 |
| Msa1401210 | AT3G08580.1 | 29.927 | 137 | 92 | 2 | 152 | 288 | 233 | 365 | 2.97e-13 | 69.7 |
| Msa1401210 | AT5G13490.1 | 29.861 | 144 | 97 | 2 | 145 | 288 | 230 | 369 | 3.76e-13 | 69.7 |
| Msa1401210 | AT5G13490.2 | 29.861 | 144 | 97 | 2 | 145 | 288 | 230 | 369 | 3.76e-13 | 69.7 |
| Msa1401210 | AT5G26200.1 | 24.026 | 308 | 205 | 9 | 4 | 288 | 30 | 331 | 3.95e-13 | 69.3 |
| Msa1401210 | AT1G14560.2 | 22.593 | 270 | 183 | 5 | 33 | 281 | 43 | 307 | 1.42e-12 | 67.4 |
| Msa1401210 | AT1G14560.1 | 22.727 | 264 | 178 | 5 | 33 | 275 | 43 | 301 | 2.04e-12 | 67.0 |
| Msa1401210 | AT5G17400.1 | 21.245 | 273 | 197 | 5 | 16 | 274 | 13 | 281 | 2.97e-12 | 66.2 |
| Msa1401210 | AT5G48970.2 | 25.871 | 201 | 129 | 5 | 17 | 197 | 64 | 264 | 3.15e-12 | 65.9 |
| Msa1401210 | AT5G48970.1 | 25.871 | 201 | 129 | 5 | 17 | 197 | 135 | 335 | 7.46e-12 | 65.5 |
| Msa1401210 | AT5G48970.1 | 26.471 | 204 | 135 | 5 | 105 | 296 | 18 | 218 | 9.62e-11 | 62.0 |
| Msa1401210 | AT2G39970.1 | 21.017 | 295 | 187 | 7 | 31 | 284 | 22 | 311 | 8.01e-12 | 65.5 |
| Msa1401210 | AT4G28390.1 | 28.467 | 137 | 94 | 2 | 152 | 288 | 231 | 363 | 1.25e-11 | 65.1 |
| Msa1401210 | AT4G28390.2 | 28.467 | 137 | 94 | 2 | 152 | 288 | 231 | 363 | 1.25e-11 | 65.1 |
| Msa1401210 | AT2G26360.1 | 25.670 | 261 | 170 | 10 | 12 | 268 | 110 | 350 | 1.93e-11 | 64.3 |
| Msa1401210 | AT5G66380.1 | 30.366 | 191 | 115 | 6 | 116 | 294 | 116 | 300 | 2.12e-11 | 63.9 |
Find 74 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATCTTTGATTATCTTTA+AGG | 0.014724 | tig0022500:-88750 | None:intergenic |
| AAATGTTGTGATGAACAATT+TGG | 0.242168 | tig0022500:+86683 | Msa1401210:CDS |
| GAGAAGAGAGAATGGAGTTT+TGG | 0.274701 | tig0022500:+86655 | Msa1401210:exon |
| GAGTTTGTAGCTGGTGGATT+TGG | 0.292105 | tig0022500:+86711 | Msa1401210:CDS |
| CGCGGCATTTATCGAGGATT+TGG | 0.311079 | tig0022500:+88485 | Msa1401210:CDS |
| CCTGCTCTAGCCTTATACTT+TGG | 0.317029 | tig0022500:+88530 | Msa1401210:CDS |
| CTCATATGTCCCAAAGTATA+AGG | 0.332931 | tig0022500:-88540 | None:intergenic |
| ATTGTCCTATGGAGAGGTTT+AGG | 0.345579 | tig0022500:+88779 | Msa1401210:CDS |
| CAACATCGTTAGAAATTTGT+TGG | 0.348347 | tig0022500:+86815 | Msa1401210:CDS |
| CTGCTTATCAAGTCTCTCTA+AGG | 0.354957 | tig0022500:+88846 | Msa1401210:CDS |
| TGAGTCTTGCTAAGAACATT+TGG | 0.357193 | tig0022500:+88447 | Msa1401210:CDS |
| TCCATGGTGAATGTTGCTTT+AGG | 0.368395 | tig0022500:+88305 | Msa1401210:CDS |
| AATGTTGTGATGAACAATTT+GGG | 0.376857 | tig0022500:+86684 | Msa1401210:CDS |
| CTGCTCTAGCCTTATACTTT+GGG | 0.383027 | tig0022500:+88531 | Msa1401210:CDS |
| TTTCTCTTTGATGTAACAAC+AGG | 0.399037 | tig0022500:+86624 | Msa1401210:five_prime_UTR |
| TTTATCTCCTCAACCATTGA+AGG | 0.399256 | tig0022500:-88917 | None:intergenic |
| AAAATTGAGAGAAGAGAGAA+TGG | 0.403716 | tig0022500:+86647 | Msa1401210:exon |
| TCGTGGGATGGCTATTCCTT+TGG | 0.409926 | tig0022500:+86863 | Msa1401210:CDS |
| GTTGAAATACAAAGGCATCT+TGG | 0.418743 | tig0022500:+88721 | Msa1401210:CDS |
| CGTGTCATGCAACAACAATC+TGG | 0.425877 | tig0022500:+86777 | Msa1401210:CDS |
| GGGAGAGAGTTTGTAGCTGG+TGG | 0.429135 | tig0022500:+86705 | Msa1401210:CDS |
| TAAAAGCATTACTCCTTCAA+TGG | 0.435285 | tig0022500:+88904 | Msa1401210:three_prime_UTR |
| GCTATTCCTTTGGCCTCTGT+TGG | 0.443097 | tig0022500:+86873 | Msa1401210:CDS |
| CTTGTCTTTATAACATCAGT+AGG | 0.452605 | tig0022500:-88674 | None:intergenic |
| TTCACATGGACCTCCTTCCA+TGG | 0.462240 | tig0022500:+88289 | Msa1401210:CDS |
| TTTGTAGCAGGAGGATTAGC+AGG | 0.467430 | tig0022500:+88626 | Msa1401210:CDS |
| CGTTAGAAATTTGTTGGCTA+AGG | 0.470910 | tig0022500:+86821 | Msa1401210:CDS |
| CATTACTCCTTCAATGGTTG+AGG | 0.474190 | tig0022500:+88910 | Msa1401210:three_prime_UTR |
| AATGTTGCTTTAGGAGGACT+TGG | 0.477406 | tig0022500:+88314 | Msa1401210:CDS |
| TTTGTAGCTGGTGGATTTGG+AGG | 0.479219 | tig0022500:+86714 | Msa1401210:CDS |
| CAGGGGAGATCAAAATACTT+TGG | 0.481107 | tig0022500:-88349 | None:intergenic |
| GGTGGATTTGGAGGCACAGC+AGG | 0.491842 | tig0022500:+86723 | Msa1401210:CDS |
| TTGGGGAGAGAGTTTGTAGC+TGG | 0.494346 | tig0022500:+86702 | Msa1401210:CDS |
| AGAAATTTGTTGGCTAAGGA+AGG | 0.495551 | tig0022500:+86825 | Msa1401210:CDS |
| GCTTTAGGAGGACTTGGTGC+AGG | 0.499633 | tig0022500:+88320 | Msa1401210:CDS |
| TGACAACTTTCTCTGCAACC+AGG | 0.506703 | tig0022500:-88584 | None:intergenic |
| GTGAGTACTATGTTTGTAGC+AGG | 0.516409 | tig0022500:+88614 | Msa1401210:CDS |
| TATAATCTCAAGTTATCCAT+TGG | 0.519724 | tig0022500:+86746 | Msa1401210:CDS |
| ATGGTGAATGTTGCTTTAGG+AGG | 0.521494 | tig0022500:+88308 | Msa1401210:CDS |
| GACCTACTGCTTTGTATCGT+GGG | 0.535570 | tig0022500:+86847 | Msa1401210:CDS |
| GGCCCCTCTACTTCTTCACA+TGG | 0.536333 | tig0022500:+88275 | Msa1401210:CDS |
| TCTTGTGTATAACTTGTGGT+TGG | 0.539629 | tig0022500:+86600 | None:intergenic |
| ATGAAGGTTCTATTGTCCTA+TGG | 0.539984 | tig0022500:+88768 | Msa1401210:CDS |
| GACAACTTTCTCTGCAACCA+GGG | 0.546362 | tig0022500:-88583 | None:intergenic |
| TACTGCTTTGTATCGTGGGA+TGG | 0.550216 | tig0022500:+86851 | Msa1401210:CDS |
| TTAAAGATAATCAAAGATGA+AGG | 0.551996 | tig0022500:+88752 | Msa1401210:CDS |
| GATTAGCAGGGATAGCAAGT+TGG | 0.552263 | tig0022500:+88639 | Msa1401210:CDS |
| CTTAGAGAGACTTGATAAGC+AGG | 0.553970 | tig0022500:-88845 | None:intergenic |
| GGTTCTATTGTCCTATGGAG+AGG | 0.556965 | tig0022500:+88773 | Msa1401210:CDS |
| GGACCTACTGCTTTGTATCG+TGG | 0.558858 | tig0022500:+86846 | Msa1401210:CDS |
| CCAAAGTATAAGGCTAGAGC+AGG | 0.559278 | tig0022500:-88530 | None:intergenic |
| AGGTCCATGTGAAGAAGTAG+AGG | 0.566149 | tig0022500:-88279 | None:intergenic |
| TCTTCTTCGTTGAAATACAA+AGG | 0.570873 | tig0022500:+88713 | Msa1401210:CDS |
| CTCCCTTAAGAAAATATCGA+GGG | 0.575513 | tig0022500:-89023 | None:intergenic |
| ATGTTCTTAGCAAGACTCAT+GGG | 0.580615 | tig0022500:-88443 | None:intergenic |
| AAAGCAACATTCACCATGGA+AGG | 0.582192 | tig0022500:-88302 | None:intergenic |
| AATGTTCTTAGCAAGACTCA+TGG | 0.587401 | tig0022500:-88444 | None:intergenic |
| GGCCTTCGCGGCATTTATCG+AGG | 0.588676 | tig0022500:+88479 | Msa1401210:CDS |
| AGTACTATGTTTGTAGCAGG+AGG | 0.589645 | tig0022500:+88617 | Msa1401210:CDS |
| TTGCTCCTAAACCTCTCCAT+AGG | 0.593048 | tig0022500:-88784 | None:intergenic |
| ATCCTCGATAAATGCCGCGA+AGG | 0.596054 | tig0022500:-88481 | None:intergenic |
| GGTCCATGTGAAGAAGTAGA+GGG | 0.615402 | tig0022500:-88278 | None:intergenic |
| TTGTCTTTATAACATCAGTA+GGG | 0.620200 | tig0022500:-88673 | None:intergenic |
| ACTCCCTTAAGAAAATATCG+AGG | 0.629365 | tig0022500:-89024 | None:intergenic |
| ATGACACGAATTGTATCCAA+TGG | 0.642830 | tig0022500:-86762 | None:intergenic |
| GCAACATTCACCATGGAAGG+AGG | 0.658325 | tig0022500:-88299 | None:intergenic |
| TTGTAGCAGGAGGATTAGCA+GGG | 0.660168 | tig0022500:+88627 | Msa1401210:CDS |
| TCCTAAAGCAACATTCACCA+TGG | 0.660244 | tig0022500:-88306 | None:intergenic |
| ATGTTGTGATGAACAATTTG+GGG | 0.663183 | tig0022500:+86685 | Msa1401210:CDS |
| ATCCCACGATACAAAGCAGT+AGG | 0.668316 | tig0022500:-86849 | None:intergenic |
| TGAAAACCAACAGAGGCCAA+AGG | 0.668489 | tig0022500:-86879 | None:intergenic |
| GTCCATGTGAAGAAGTAGAG+GGG | 0.690759 | tig0022500:-88277 | None:intergenic |
| CCTAACCTGAAAACCAACAG+AGG | 0.709999 | tig0022500:-86886 | None:intergenic |
| ACAAGAGAGAAACTTCACCC+TGG | 0.733018 | tig0022500:+88566 | Msa1401210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAATTAAATAAAAAA+AGG | - | tig0022500:87496-87515 | None:intergenic | 0.0% |
| !! | TAAATTAATTAAATAAAAAA+AGG | - | tig0022500:87496-87515 | None:intergenic | 0.0% |
| !! | TCATATCTAATTTAATATAT+CGG | + | tig0022500:87399-87418 | Msa1401210:intron | 10.0% |
| !!! | TTATATAACTTTTATTTTTG+AGG | + | tig0022500:87516-87535 | Msa1401210:intron | 10.0% |
| !!! | TTTCTAAAATGTTTAATAAT+AGG | - | tig0022500:87977-87996 | None:intergenic | 10.0% |
| !! | TCATATCTAATTTAATATAT+CGG | + | tig0022500:87399-87418 | Msa1401210:intron | 10.0% |
| !!! | TTATATAACTTTTATTTTTG+AGG | + | tig0022500:87516-87535 | Msa1401210:intron | 10.0% |
| !!! | TTTCTAAAATGTTTAATAAT+AGG | - | tig0022500:87977-87996 | None:intergenic | 10.0% |
| !! | AAACAAGAAAACAAAAATAA+AGG | - | tig0022500:87309-87328 | None:intergenic | 15.0% |
| !!! | ATTAAACATTTTAGAAAGAA+TGG | + | tig0022500:87980-87999 | Msa1401210:intron | 15.0% |
| !! | TTGTTGTCATAAAAAAAAAA+TGG | - | tig0022500:89003-89022 | None:intergenic | 15.0% |
| !! | AAACAAGAAAACAAAAATAA+AGG | - | tig0022500:87309-87328 | None:intergenic | 15.0% |
| !!! | ATTAAACATTTTAGAAAGAA+TGG | + | tig0022500:87980-87999 | Msa1401210:intron | 15.0% |
| !! | TTGTTGTCATAAAAAAAAAA+TGG | - | tig0022500:89003-89022 | None:intergenic | 15.0% |
| !! | TTATTATAATGAAGGGATTA+AGG | - | tig0022500:86925-86944 | None:intergenic | 20.0% |
| !! | ATCAAACAATTCAAATTTAG+TGG | + | tig0022500:86976-86995 | Msa1401210:intron | 20.0% |
| !! | TCAATCACAATTTAAAAACA+AGG | - | tig0022500:87046-87065 | None:intergenic | 20.0% |
| !!! | GTTTTTAAATTGTGATTGAA+TGG | + | tig0022500:87047-87066 | Msa1401210:intron | 20.0% |
| !! | GAAAACAAAAATAAAGGAAA+TGG | - | tig0022500:87303-87322 | None:intergenic | 20.0% |
| !! | TAAAAAAAGGACAATTCTAT+AGG | - | tig0022500:87483-87502 | None:intergenic | 20.0% |
| !! | ATCTAGTTGTTAAAATACTA+CGG | + | tig0022500:87603-87622 | Msa1401210:intron | 20.0% |
| !! | AGAAAAATACTATAATTGCA+GGG | - | tig0022500:88025-88044 | None:intergenic | 20.0% |
| !! | AAGAAAAATACTATAATTGC+AGG | - | tig0022500:88026-88045 | None:intergenic | 20.0% |
| !! | TTCATCTTTGATTATCTTTA+AGG | - | tig0022500:88753-88772 | None:intergenic | 20.0% |
| !! | TTAAAGATAATCAAAGATGA+AGG | + | tig0022500:88752-88771 | Msa1401210:CDS | 20.0% |
| !!! | ACTTTTTATTGCAATCTTTT+TGG | - | tig0022500:88946-88965 | None:intergenic | 20.0% |
| !! | TTATTATAATGAAGGGATTA+AGG | - | tig0022500:86925-86944 | None:intergenic | 20.0% |
| !! | ATCAAACAATTCAAATTTAG+TGG | + | tig0022500:86976-86995 | Msa1401210:intron | 20.0% |
| !! | TCAATCACAATTTAAAAACA+AGG | - | tig0022500:87046-87065 | None:intergenic | 20.0% |
| !!! | GTTTTTAAATTGTGATTGAA+TGG | + | tig0022500:87047-87066 | Msa1401210:intron | 20.0% |
| !! | GAAAACAAAAATAAAGGAAA+TGG | - | tig0022500:87303-87322 | None:intergenic | 20.0% |
| !! | TAAAAAAAGGACAATTCTAT+AGG | - | tig0022500:87483-87502 | None:intergenic | 20.0% |
| !! | ATCTAGTTGTTAAAATACTA+CGG | + | tig0022500:87603-87622 | Msa1401210:intron | 20.0% |
| !! | AGAAAAATACTATAATTGCA+GGG | - | tig0022500:88025-88044 | None:intergenic | 20.0% |
| !! | AAGAAAAATACTATAATTGC+AGG | - | tig0022500:88026-88045 | None:intergenic | 20.0% |
| !! | TTCATCTTTGATTATCTTTA+AGG | - | tig0022500:88753-88772 | None:intergenic | 20.0% |
| !! | TTAAAGATAATCAAAGATGA+AGG | + | tig0022500:88752-88771 | Msa1401210:CDS | 20.0% |
| !!! | ACTTTTTATTGCAATCTTTT+TGG | - | tig0022500:88946-88965 | None:intergenic | 20.0% |
| ! | AAATGTTGTGATGAACAATT+TGG | + | tig0022500:86683-86702 | Msa1401210:CDS | 25.0% |
| ! | AATGTTGTGATGAACAATTT+GGG | + | tig0022500:86684-86703 | Msa1401210:CDS | 25.0% |
| ! | TATAATCTCAAGTTATCCAT+TGG | + | tig0022500:86746-86765 | Msa1401210:CDS | 25.0% |
| ! | CACTTCGTTATTATAATGAA+GGG | - | tig0022500:86932-86951 | None:intergenic | 25.0% |
| ! | CTTCATTATAATAACGAAGT+GGG | + | tig0022500:86931-86950 | Msa1401210:intron | 25.0% |
| ! | AATTTGATCAAGATTGACTA+TGG | - | tig0022500:87164-87183 | None:intergenic | 25.0% |
| !! | GCGCATTTTTAAATCAATTT+TGG | + | tig0022500:87217-87236 | Msa1401210:intron | 25.0% |
| ! | GTATCTGAAAAATATGCTAT+TGG | - | tig0022500:87760-87779 | None:intergenic | 25.0% |
| ! | TTTGTAGAACACATATATGT+TGG | - | tig0022500:87907-87926 | None:intergenic | 25.0% |
| ! | GCTCATTTGAAAAATACATT+TGG | + | tig0022500:87935-87954 | Msa1401210:intron | 25.0% |
| !!! | AATTTTAATCAACTCAACAG+GGG | - | tig0022500:88369-88388 | None:intergenic | 25.0% |
| !!! | GAATTTTAATCAACTCAACA+GGG | - | tig0022500:88370-88389 | None:intergenic | 25.0% |
| !! | TTAAGTTCTTTTGTAGTTGA+AGG | - | tig0022500:88394-88413 | None:intergenic | 25.0% |
| ! | TAAGAACATTTGGAAAAATG+AGG | + | tig0022500:88457-88476 | Msa1401210:CDS | 25.0% |
| ! | AAGAACATTTGGAAAAATGA+GGG | + | tig0022500:88458-88477 | Msa1401210:CDS | 25.0% |
| ! | TTGTCTTTATAACATCAGTA+GGG | - | tig0022500:88676-88695 | None:intergenic | 25.0% |
| ! | TGCAATAAAAAGTTAGTAAG+AGG | + | tig0022500:88953-88972 | Msa1401210:three_prime_UTR | 25.0% |
| ! | AAATGTTGTGATGAACAATT+TGG | + | tig0022500:86683-86702 | Msa1401210:CDS | 25.0% |
| ! | AATGTTGTGATGAACAATTT+GGG | + | tig0022500:86684-86703 | Msa1401210:CDS | 25.0% |
| ! | TATAATCTCAAGTTATCCAT+TGG | + | tig0022500:86746-86765 | Msa1401210:CDS | 25.0% |
| ! | CACTTCGTTATTATAATGAA+GGG | - | tig0022500:86932-86951 | None:intergenic | 25.0% |
| ! | CTTCATTATAATAACGAAGT+GGG | + | tig0022500:86931-86950 | Msa1401210:intron | 25.0% |
| ! | AATTTGATCAAGATTGACTA+TGG | - | tig0022500:87164-87183 | None:intergenic | 25.0% |
| !! | GCGCATTTTTAAATCAATTT+TGG | + | tig0022500:87217-87236 | Msa1401210:intron | 25.0% |
| ! | GTATCTGAAAAATATGCTAT+TGG | - | tig0022500:87760-87779 | None:intergenic | 25.0% |
| ! | TTTGTAGAACACATATATGT+TGG | - | tig0022500:87907-87926 | None:intergenic | 25.0% |
| ! | GCTCATTTGAAAAATACATT+TGG | + | tig0022500:87935-87954 | Msa1401210:intron | 25.0% |
| !!! | AATTTTAATCAACTCAACAG+GGG | - | tig0022500:88369-88388 | None:intergenic | 25.0% |
| !!! | GAATTTTAATCAACTCAACA+GGG | - | tig0022500:88370-88389 | None:intergenic | 25.0% |
| !! | TTAAGTTCTTTTGTAGTTGA+AGG | - | tig0022500:88394-88413 | None:intergenic | 25.0% |
| ! | TAAGAACATTTGGAAAAATG+AGG | + | tig0022500:88457-88476 | Msa1401210:CDS | 25.0% |
| ! | AAGAACATTTGGAAAAATGA+GGG | + | tig0022500:88458-88477 | Msa1401210:CDS | 25.0% |
| ! | TTGTCTTTATAACATCAGTA+GGG | - | tig0022500:88676-88695 | None:intergenic | 25.0% |
| ! | TGCAATAAAAAGTTAGTAAG+AGG | + | tig0022500:88953-88972 | Msa1401210:three_prime_UTR | 25.0% |
| TTTCTCTTTGATGTAACAAC+AGG | + | tig0022500:86624-86643 | Msa1401210:five_prime_UTR | 30.0% | |
| AAAATTGAGAGAAGAGAGAA+TGG | + | tig0022500:86647-86666 | Msa1401210:exon | 30.0% | |
| ATGTTGTGATGAACAATTTG+GGG | + | tig0022500:86685-86704 | Msa1401210:CDS | 30.0% | |
| CAACATCGTTAGAAATTTGT+TGG | + | tig0022500:86815-86834 | Msa1401210:CDS | 30.0% | |
| CCACTTCGTTATTATAATGA+AGG | - | tig0022500:86933-86952 | None:intergenic | 30.0% | |
| CCTTCATTATAATAACGAAG+TGG | + | tig0022500:86930-86949 | Msa1401210:intron | 30.0% | |
| GATGTGAATTATTGATGCAA+TGG | - | tig0022500:87381-87400 | None:intergenic | 30.0% | |
| GGTAAGATTTATTGATCCAA+CGG | + | tig0022500:87420-87439 | Msa1401210:intron | 30.0% | |
| CATAAAATAGTTTCTACCGT+TGG | - | tig0022500:87439-87458 | None:intergenic | 30.0% | |
| TTAAAATACTACGGTTCAAG+TGG | + | tig0022500:87612-87631 | Msa1401210:intron | 30.0% | |
| CCTAGTAAGAAACTTATAGA+GGG | - | tig0022500:87716-87735 | None:intergenic | 30.0% | |
| TCCTAGTAAGAAACTTATAG+AGG | - | tig0022500:87717-87736 | None:intergenic | 30.0% | |
| AGTTTCTTACTAGGATAACT+AGG | + | tig0022500:87722-87741 | Msa1401210:intron | 30.0% | |
| GTTTCTTACTAGGATAACTA+GGG | + | tig0022500:87723-87742 | Msa1401210:intron | 30.0% | |
| ! | TATGTTGGACAGTGTTTTAT+AGG | - | tig0022500:87892-87911 | None:intergenic | 30.0% |
| TTAACCATTGATGTCATACA+TGG | + | tig0022500:88108-88127 | Msa1401210:intron | 30.0% | |
| TATTGTCGCATCAACTTATT+GGG | - | tig0022500:88158-88177 | None:intergenic | 30.0% | |
| ATATTGTCGCATCAACTTAT+TGG | - | tig0022500:88159-88178 | None:intergenic | 30.0% | |
| !! | ACCGTTTTTACAAGAATTGT+TGG | + | tig0022500:88254-88273 | Msa1401210:CDS | 30.0% |
| GCCAACAATTCTTGTAAAAA+CGG | - | tig0022500:88258-88277 | None:intergenic | 30.0% | |
| !! | CGAATTTTAATCAACTCAAC+AGG | - | tig0022500:88371-88390 | None:intergenic | 30.0% |
| CTTGTCTTTATAACATCAGT+AGG | - | tig0022500:88677-88696 | None:intergenic | 30.0% | |
| TCTTCTTCGTTGAAATACAA+AGG | + | tig0022500:88713-88732 | Msa1401210:CDS | 30.0% | |
| !! | TAAAAGCATTACTCCTTCAA+TGG | + | tig0022500:88904-88923 | Msa1401210:three_prime_UTR | 30.0% |
| TTTCTCTTTGATGTAACAAC+AGG | + | tig0022500:86624-86643 | Msa1401210:five_prime_UTR | 30.0% | |
| AAAATTGAGAGAAGAGAGAA+TGG | + | tig0022500:86647-86666 | Msa1401210:exon | 30.0% | |
| ATGTTGTGATGAACAATTTG+GGG | + | tig0022500:86685-86704 | Msa1401210:CDS | 30.0% | |
| CAACATCGTTAGAAATTTGT+TGG | + | tig0022500:86815-86834 | Msa1401210:CDS | 30.0% | |
| CCACTTCGTTATTATAATGA+AGG | - | tig0022500:86933-86952 | None:intergenic | 30.0% | |
| CCTTCATTATAATAACGAAG+TGG | + | tig0022500:86930-86949 | Msa1401210:intron | 30.0% | |
| GATGTGAATTATTGATGCAA+TGG | - | tig0022500:87381-87400 | None:intergenic | 30.0% | |
| GGTAAGATTTATTGATCCAA+CGG | + | tig0022500:87420-87439 | Msa1401210:intron | 30.0% | |
| CATAAAATAGTTTCTACCGT+TGG | - | tig0022500:87439-87458 | None:intergenic | 30.0% | |
| TTAAAATACTACGGTTCAAG+TGG | + | tig0022500:87612-87631 | Msa1401210:intron | 30.0% | |
| CCTAGTAAGAAACTTATAGA+GGG | - | tig0022500:87716-87735 | None:intergenic | 30.0% | |
| TCCTAGTAAGAAACTTATAG+AGG | - | tig0022500:87717-87736 | None:intergenic | 30.0% | |
| AGTTTCTTACTAGGATAACT+AGG | + | tig0022500:87722-87741 | Msa1401210:intron | 30.0% | |
| GTTTCTTACTAGGATAACTA+GGG | + | tig0022500:87723-87742 | Msa1401210:intron | 30.0% | |
| ! | TATGTTGGACAGTGTTTTAT+AGG | - | tig0022500:87892-87911 | None:intergenic | 30.0% |
| TTAACCATTGATGTCATACA+TGG | + | tig0022500:88108-88127 | Msa1401210:intron | 30.0% | |
| TATTGTCGCATCAACTTATT+GGG | - | tig0022500:88158-88177 | None:intergenic | 30.0% | |
| ATATTGTCGCATCAACTTAT+TGG | - | tig0022500:88159-88178 | None:intergenic | 30.0% | |
| !! | ACCGTTTTTACAAGAATTGT+TGG | + | tig0022500:88254-88273 | Msa1401210:CDS | 30.0% |
| GCCAACAATTCTTGTAAAAA+CGG | - | tig0022500:88258-88277 | None:intergenic | 30.0% | |
| !! | CGAATTTTAATCAACTCAAC+AGG | - | tig0022500:88371-88390 | None:intergenic | 30.0% |
| CTTGTCTTTATAACATCAGT+AGG | - | tig0022500:88677-88696 | None:intergenic | 30.0% | |
| TCTTCTTCGTTGAAATACAA+AGG | + | tig0022500:88713-88732 | Msa1401210:CDS | 30.0% | |
| !! | TAAAAGCATTACTCCTTCAA+TGG | + | tig0022500:88904-88923 | Msa1401210:three_prime_UTR | 30.0% |
| ATGACACGAATTGTATCCAA+TGG | - | tig0022500:86765-86784 | None:intergenic | 35.0% | |
| !! | CGTTAGAAATTTGTTGGCTA+AGG | + | tig0022500:86821-86840 | Msa1401210:CDS | 35.0% |
| !! | AGAAATTTGTTGGCTAAGGA+AGG | + | tig0022500:86825-86844 | Msa1401210:CDS | 35.0% |
| ! | ACATGCAGTCGATTTAACTT+TGG | - | tig0022500:87124-87143 | None:intergenic | 35.0% |
| TGATCAAGATTGACTATGGT+CGG | - | tig0022500:87160-87179 | None:intergenic | 35.0% | |
| TTATTGATGCAATGGTGAAG+TGG | - | tig0022500:87373-87392 | None:intergenic | 35.0% | |
| GAGTACTCAAGTTTAATCCT+TGG | + | tig0022500:87679-87698 | Msa1401210:intron | 35.0% | |
| AGAAACTTATAGAGGGATCA+GGG | - | tig0022500:87709-87728 | None:intergenic | 35.0% | |
| AAGAAACTTATAGAGGGATC+AGG | - | tig0022500:87710-87729 | None:intergenic | 35.0% | |
| CCCTCTATAAGTTTCTTACT+AGG | + | tig0022500:87713-87732 | Msa1401210:intron | 35.0% | |
| !! | TGCAAGTTAAATGGTTTGGT+AGG | - | tig0022500:87843-87862 | None:intergenic | 35.0% |
| GAAGTGCAAGTTAAATGGTT+TGG | - | tig0022500:87847-87866 | None:intergenic | 35.0% | |
| CACATGAAGTGCAAGTTAAA+TGG | - | tig0022500:87852-87871 | None:intergenic | 35.0% | |
| ATTGTCGCATCAACTTATTG+GGG | - | tig0022500:88157-88176 | None:intergenic | 35.0% | |
| ATGTTCTTAGCAAGACTCAT+GGG | - | tig0022500:88446-88465 | None:intergenic | 35.0% | |
| AATGTTCTTAGCAAGACTCA+TGG | - | tig0022500:88447-88466 | None:intergenic | 35.0% | |
| TGAGTCTTGCTAAGAACATT+TGG | + | tig0022500:88447-88466 | Msa1401210:CDS | 35.0% | |
| CTCATATGTCCCAAAGTATA+AGG | - | tig0022500:88543-88562 | None:intergenic | 35.0% | |
| !! | GTTGAAATACAAAGGCATCT+TGG | + | tig0022500:88721-88740 | Msa1401210:CDS | 35.0% |
| ATGAAGGTTCTATTGTCCTA+TGG | + | tig0022500:88768-88787 | Msa1401210:CDS | 35.0% | |
| TTTATCTCCTCAACCATTGA+AGG | - | tig0022500:88920-88939 | None:intergenic | 35.0% | |
| ATGACACGAATTGTATCCAA+TGG | - | tig0022500:86765-86784 | None:intergenic | 35.0% | |
| !! | CGTTAGAAATTTGTTGGCTA+AGG | + | tig0022500:86821-86840 | Msa1401210:CDS | 35.0% |
| !! | AGAAATTTGTTGGCTAAGGA+AGG | + | tig0022500:86825-86844 | Msa1401210:CDS | 35.0% |
| ! | ACATGCAGTCGATTTAACTT+TGG | - | tig0022500:87124-87143 | None:intergenic | 35.0% |
| TGATCAAGATTGACTATGGT+CGG | - | tig0022500:87160-87179 | None:intergenic | 35.0% | |
| TTATTGATGCAATGGTGAAG+TGG | - | tig0022500:87373-87392 | None:intergenic | 35.0% | |
| GAGTACTCAAGTTTAATCCT+TGG | + | tig0022500:87679-87698 | Msa1401210:intron | 35.0% | |
| AGAAACTTATAGAGGGATCA+GGG | - | tig0022500:87709-87728 | None:intergenic | 35.0% | |
| AAGAAACTTATAGAGGGATC+AGG | - | tig0022500:87710-87729 | None:intergenic | 35.0% | |
| CCCTCTATAAGTTTCTTACT+AGG | + | tig0022500:87713-87732 | Msa1401210:intron | 35.0% | |
| !! | TGCAAGTTAAATGGTTTGGT+AGG | - | tig0022500:87843-87862 | None:intergenic | 35.0% |
| GAAGTGCAAGTTAAATGGTT+TGG | - | tig0022500:87847-87866 | None:intergenic | 35.0% | |
| CACATGAAGTGCAAGTTAAA+TGG | - | tig0022500:87852-87871 | None:intergenic | 35.0% | |
| ATTGTCGCATCAACTTATTG+GGG | - | tig0022500:88157-88176 | None:intergenic | 35.0% | |
| ATGTTCTTAGCAAGACTCAT+GGG | - | tig0022500:88446-88465 | None:intergenic | 35.0% | |
| AATGTTCTTAGCAAGACTCA+TGG | - | tig0022500:88447-88466 | None:intergenic | 35.0% | |
| TGAGTCTTGCTAAGAACATT+TGG | + | tig0022500:88447-88466 | Msa1401210:CDS | 35.0% | |
| CTCATATGTCCCAAAGTATA+AGG | - | tig0022500:88543-88562 | None:intergenic | 35.0% | |
| !! | GTTGAAATACAAAGGCATCT+TGG | + | tig0022500:88721-88740 | Msa1401210:CDS | 35.0% |
| ATGAAGGTTCTATTGTCCTA+TGG | + | tig0022500:88768-88787 | Msa1401210:CDS | 35.0% | |
| TTTATCTCCTCAACCATTGA+AGG | - | tig0022500:88920-88939 | None:intergenic | 35.0% | |
| ! | GAGAAGAGAGAATGGAGTTT+TGG | + | tig0022500:86655-86674 | Msa1401210:exon | 40.0% |
| !! | ATTTTTCAGATACCCTGACC+CGG | + | tig0022500:87767-87786 | Msa1401210:intron | 40.0% |
| AGCAAAACATACGAGTCAGT+TGG | - | tig0022500:87795-87814 | None:intergenic | 40.0% | |
| TGGACCATGTATGACATCAA+TGG | - | tig0022500:88115-88134 | None:intergenic | 40.0% | |
| TTGTCGCATCAACTTATTGG+GGG | - | tig0022500:88156-88175 | None:intergenic | 40.0% | |
| AAAGCAACATTCACCATGGA+AGG | - | tig0022500:88305-88324 | None:intergenic | 40.0% | |
| !! | TCCATGGTGAATGTTGCTTT+AGG | + | tig0022500:88305-88324 | Msa1401210:CDS | 40.0% |
| TCCTAAAGCAACATTCACCA+TGG | - | tig0022500:88309-88328 | None:intergenic | 40.0% | |
| !! | ATGGTGAATGTTGCTTTAGG+AGG | + | tig0022500:88308-88327 | Msa1401210:CDS | 40.0% |
| !! | AATGTTGCTTTAGGAGGACT+TGG | + | tig0022500:88314-88333 | Msa1401210:CDS | 40.0% |
| CAGGGGAGATCAAAATACTT+TGG | - | tig0022500:88352-88371 | None:intergenic | 40.0% | |
| !! | CTGCTCTAGCCTTATACTTT+GGG | + | tig0022500:88531-88550 | Msa1401210:CDS | 40.0% |
| GTGAGTACTATGTTTGTAGC+AGG | + | tig0022500:88614-88633 | Msa1401210:CDS | 40.0% | |
| AGTACTATGTTTGTAGCAGG+AGG | + | tig0022500:88617-88636 | Msa1401210:CDS | 40.0% | |
| ATTGTCCTATGGAGAGGTTT+AGG | + | tig0022500:88779-88798 | Msa1401210:CDS | 40.0% | |
| CTTAGAGAGACTTGATAAGC+AGG | - | tig0022500:88848-88867 | None:intergenic | 40.0% | |
| CTGCTTATCAAGTCTCTCTA+AGG | + | tig0022500:88846-88865 | Msa1401210:CDS | 40.0% | |
| CATTACTCCTTCAATGGTTG+AGG | + | tig0022500:88910-88929 | Msa1401210:three_prime_UTR | 40.0% | |
| ! | GAGAAGAGAGAATGGAGTTT+TGG | + | tig0022500:86655-86674 | Msa1401210:exon | 40.0% |
| !! | ATTTTTCAGATACCCTGACC+CGG | + | tig0022500:87767-87786 | Msa1401210:intron | 40.0% |
| AGCAAAACATACGAGTCAGT+TGG | - | tig0022500:87795-87814 | None:intergenic | 40.0% | |
| TGGACCATGTATGACATCAA+TGG | - | tig0022500:88115-88134 | None:intergenic | 40.0% | |
| TTGTCGCATCAACTTATTGG+GGG | - | tig0022500:88156-88175 | None:intergenic | 40.0% | |
| AAAGCAACATTCACCATGGA+AGG | - | tig0022500:88305-88324 | None:intergenic | 40.0% | |
| !! | TCCATGGTGAATGTTGCTTT+AGG | + | tig0022500:88305-88324 | Msa1401210:CDS | 40.0% |
| TCCTAAAGCAACATTCACCA+TGG | - | tig0022500:88309-88328 | None:intergenic | 40.0% | |
| !! | ATGGTGAATGTTGCTTTAGG+AGG | + | tig0022500:88308-88327 | Msa1401210:CDS | 40.0% |
| !! | AATGTTGCTTTAGGAGGACT+TGG | + | tig0022500:88314-88333 | Msa1401210:CDS | 40.0% |
| CAGGGGAGATCAAAATACTT+TGG | - | tig0022500:88352-88371 | None:intergenic | 40.0% | |
| !! | CTGCTCTAGCCTTATACTTT+GGG | + | tig0022500:88531-88550 | Msa1401210:CDS | 40.0% |
| GTGAGTACTATGTTTGTAGC+AGG | + | tig0022500:88614-88633 | Msa1401210:CDS | 40.0% | |
| AGTACTATGTTTGTAGCAGG+AGG | + | tig0022500:88617-88636 | Msa1401210:CDS | 40.0% | |
| ATTGTCCTATGGAGAGGTTT+AGG | + | tig0022500:88779-88798 | Msa1401210:CDS | 40.0% | |
| CTTAGAGAGACTTGATAAGC+AGG | - | tig0022500:88848-88867 | None:intergenic | 40.0% | |
| CTGCTTATCAAGTCTCTCTA+AGG | + | tig0022500:88846-88865 | Msa1401210:CDS | 40.0% | |
| CATTACTCCTTCAATGGTTG+AGG | + | tig0022500:88910-88929 | Msa1401210:three_prime_UTR | 40.0% | |
| !! | GAGTTTGTAGCTGGTGGATT+TGG | + | tig0022500:86711-86730 | Msa1401210:CDS | 45.0% |
| !! | TTTGTAGCTGGTGGATTTGG+AGG | + | tig0022500:86714-86733 | Msa1401210:CDS | 45.0% |
| CGTGTCATGCAACAACAATC+TGG | + | tig0022500:86777-86796 | Msa1401210:CDS | 45.0% | |
| GACCTACTGCTTTGTATCGT+GGG | + | tig0022500:86847-86866 | Msa1401210:CDS | 45.0% | |
| ATCCCACGATACAAAGCAGT+AGG | - | tig0022500:86852-86871 | None:intergenic | 45.0% | |
| TACTGCTTTGTATCGTGGGA+TGG | + | tig0022500:86851-86870 | Msa1401210:CDS | 45.0% | |
| TGAAAACCAACAGAGGCCAA+AGG | - | tig0022500:86882-86901 | None:intergenic | 45.0% | |
| !!! | TTTGGCCTCTGTTGGTTTTC+AGG | + | tig0022500:86881-86900 | Msa1401210:CDS | 45.0% |
| CCTAACCTGAAAACCAACAG+AGG | - | tig0022500:86889-86908 | None:intergenic | 45.0% | |
| !!! | CCTCTGTTGGTTTTCAGGTT+AGG | + | tig0022500:86886-86905 | Msa1401210:intron | 45.0% |
| AATAACGAAGTGGGCAACTG+TGG | + | tig0022500:86940-86959 | Msa1401210:intron | 45.0% | |
| GTGAAGTGGACACTTGTGTA+CGG | - | tig0022500:87359-87378 | None:intergenic | 45.0% | |
| GGCACACGGTGTGATTTAAT+TGG | - | tig0022500:88135-88154 | None:intergenic | 45.0% | |
| ! | ATCAACTTATTGGGGGCACA+CGG | - | tig0022500:88149-88168 | None:intergenic | 45.0% |
| GTCCATGTGAAGAAGTAGAG+GGG | - | tig0022500:88280-88299 | None:intergenic | 45.0% | |
| GGTCCATGTGAAGAAGTAGA+GGG | - | tig0022500:88281-88300 | None:intergenic | 45.0% | |
| AGGTCCATGTGAAGAAGTAG+AGG | - | tig0022500:88282-88301 | None:intergenic | 45.0% | |
| CCAAAGTATAAGGCTAGAGC+AGG | - | tig0022500:88533-88552 | None:intergenic | 45.0% | |
| !! | CCTGCTCTAGCCTTATACTT+TGG | + | tig0022500:88530-88549 | Msa1401210:CDS | 45.0% |
| ACAAGAGAGAAACTTCACCC+TGG | + | tig0022500:88566-88585 | Msa1401210:CDS | 45.0% | |
| GACAACTTTCTCTGCAACCA+GGG | - | tig0022500:88586-88605 | None:intergenic | 45.0% | |
| TGACAACTTTCTCTGCAACC+AGG | - | tig0022500:88587-88606 | None:intergenic | 45.0% | |
| ! | TTTGTAGCAGGAGGATTAGC+AGG | + | tig0022500:88626-88645 | Msa1401210:CDS | 45.0% |
| ! | TTGTAGCAGGAGGATTAGCA+GGG | + | tig0022500:88627-88646 | Msa1401210:CDS | 45.0% |
| GATTAGCAGGGATAGCAAGT+TGG | + | tig0022500:88639-88658 | Msa1401210:CDS | 45.0% | |
| GGTTCTATTGTCCTATGGAG+AGG | + | tig0022500:88773-88792 | Msa1401210:CDS | 45.0% | |
| TTGCTCCTAAACCTCTCCAT+AGG | - | tig0022500:88787-88806 | None:intergenic | 45.0% | |
| !! | GAGTTTGTAGCTGGTGGATT+TGG | + | tig0022500:86711-86730 | Msa1401210:CDS | 45.0% |
| !! | TTTGTAGCTGGTGGATTTGG+AGG | + | tig0022500:86714-86733 | Msa1401210:CDS | 45.0% |
| CGTGTCATGCAACAACAATC+TGG | + | tig0022500:86777-86796 | Msa1401210:CDS | 45.0% | |
| GACCTACTGCTTTGTATCGT+GGG | + | tig0022500:86847-86866 | Msa1401210:CDS | 45.0% | |
| ATCCCACGATACAAAGCAGT+AGG | - | tig0022500:86852-86871 | None:intergenic | 45.0% | |
| TACTGCTTTGTATCGTGGGA+TGG | + | tig0022500:86851-86870 | Msa1401210:CDS | 45.0% | |
| TGAAAACCAACAGAGGCCAA+AGG | - | tig0022500:86882-86901 | None:intergenic | 45.0% | |
| !!! | TTTGGCCTCTGTTGGTTTTC+AGG | + | tig0022500:86881-86900 | Msa1401210:CDS | 45.0% |
| CCTAACCTGAAAACCAACAG+AGG | - | tig0022500:86889-86908 | None:intergenic | 45.0% | |
| !!! | CCTCTGTTGGTTTTCAGGTT+AGG | + | tig0022500:86886-86905 | Msa1401210:intron | 45.0% |
| AATAACGAAGTGGGCAACTG+TGG | + | tig0022500:86940-86959 | Msa1401210:intron | 45.0% | |
| GTGAAGTGGACACTTGTGTA+CGG | - | tig0022500:87359-87378 | None:intergenic | 45.0% | |
| GGCACACGGTGTGATTTAAT+TGG | - | tig0022500:88135-88154 | None:intergenic | 45.0% | |
| ! | ATCAACTTATTGGGGGCACA+CGG | - | tig0022500:88149-88168 | None:intergenic | 45.0% |
| GTCCATGTGAAGAAGTAGAG+GGG | - | tig0022500:88280-88299 | None:intergenic | 45.0% | |
| GGTCCATGTGAAGAAGTAGA+GGG | - | tig0022500:88281-88300 | None:intergenic | 45.0% | |
| AGGTCCATGTGAAGAAGTAG+AGG | - | tig0022500:88282-88301 | None:intergenic | 45.0% | |
| CCAAAGTATAAGGCTAGAGC+AGG | - | tig0022500:88533-88552 | None:intergenic | 45.0% | |
| !! | CCTGCTCTAGCCTTATACTT+TGG | + | tig0022500:88530-88549 | Msa1401210:CDS | 45.0% |
| ACAAGAGAGAAACTTCACCC+TGG | + | tig0022500:88566-88585 | Msa1401210:CDS | 45.0% | |
| GACAACTTTCTCTGCAACCA+GGG | - | tig0022500:88586-88605 | None:intergenic | 45.0% | |
| TGACAACTTTCTCTGCAACC+AGG | - | tig0022500:88587-88606 | None:intergenic | 45.0% | |
| ! | TTTGTAGCAGGAGGATTAGC+AGG | + | tig0022500:88626-88645 | Msa1401210:CDS | 45.0% |
| ! | TTGTAGCAGGAGGATTAGCA+GGG | + | tig0022500:88627-88646 | Msa1401210:CDS | 45.0% |
| GATTAGCAGGGATAGCAAGT+TGG | + | tig0022500:88639-88658 | Msa1401210:CDS | 45.0% | |
| GGTTCTATTGTCCTATGGAG+AGG | + | tig0022500:88773-88792 | Msa1401210:CDS | 45.0% | |
| TTGCTCCTAAACCTCTCCAT+AGG | - | tig0022500:88787-88806 | None:intergenic | 45.0% | |
| !!! | AAAAAATATGTTTATTTTTA+TGG | + | tig0022500:88201-88220 | Msa1401210:intron | 5.0% |
| !!! | AAAAAATATGTTTATTTTTA+TGG | + | tig0022500:88201-88220 | Msa1401210:intron | 5.0% |
| TTGGGGAGAGAGTTTGTAGC+TGG | + | tig0022500:86702-86721 | Msa1401210:CDS | 50.0% | |
| GGACCTACTGCTTTGTATCG+TGG | + | tig0022500:86846-86865 | Msa1401210:CDS | 50.0% | |
| TCGTGGGATGGCTATTCCTT+TGG | + | tig0022500:86863-86882 | Msa1401210:CDS | 50.0% | |
| GCTATTCCTTTGGCCTCTGT+TGG | + | tig0022500:86873-86892 | Msa1401210:CDS | 50.0% | |
| ! | ACATACGAGTCAGTTGGCTC+CGG | - | tig0022500:87789-87808 | None:intergenic | 50.0% |
| TTCACATGGACCTCCTTCCA+TGG | + | tig0022500:88289-88308 | Msa1401210:CDS | 50.0% | |
| GCAACATTCACCATGGAAGG+AGG | - | tig0022500:88302-88321 | None:intergenic | 50.0% | |
| TGGAAAAATGAGGGCCTTCG+CGG | + | tig0022500:88467-88486 | Msa1401210:CDS | 50.0% | |
| ATCCTCGATAAATGCCGCGA+AGG | - | tig0022500:88484-88503 | None:intergenic | 50.0% | |
| CGCGGCATTTATCGAGGATT+TGG | + | tig0022500:88485-88504 | Msa1401210:CDS | 50.0% | |
| TTGGGGAGAGAGTTTGTAGC+TGG | + | tig0022500:86702-86721 | Msa1401210:CDS | 50.0% | |
| GGACCTACTGCTTTGTATCG+TGG | + | tig0022500:86846-86865 | Msa1401210:CDS | 50.0% | |
| TCGTGGGATGGCTATTCCTT+TGG | + | tig0022500:86863-86882 | Msa1401210:CDS | 50.0% | |
| GCTATTCCTTTGGCCTCTGT+TGG | + | tig0022500:86873-86892 | Msa1401210:CDS | 50.0% | |
| ! | ACATACGAGTCAGTTGGCTC+CGG | - | tig0022500:87789-87808 | None:intergenic | 50.0% |
| TTCACATGGACCTCCTTCCA+TGG | + | tig0022500:88289-88308 | Msa1401210:CDS | 50.0% | |
| GCAACATTCACCATGGAAGG+AGG | - | tig0022500:88302-88321 | None:intergenic | 50.0% | |
| TGGAAAAATGAGGGCCTTCG+CGG | + | tig0022500:88467-88486 | Msa1401210:CDS | 50.0% | |
| ATCCTCGATAAATGCCGCGA+AGG | - | tig0022500:88484-88503 | None:intergenic | 50.0% | |
| CGCGGCATTTATCGAGGATT+TGG | + | tig0022500:88485-88504 | Msa1401210:CDS | 50.0% | |
| GGGAGAGAGTTTGTAGCTGG+TGG | + | tig0022500:86705-86724 | Msa1401210:CDS | 55.0% | |
| AGAGGGATCAGGGAGATCCA+AGG | - | tig0022500:87699-87718 | None:intergenic | 55.0% | |
| ! | CATACGAGTCAGTTGGCTCC+GGG | - | tig0022500:87788-87807 | None:intergenic | 55.0% |
| GGCCCCTCTACTTCTTCACA+TGG | + | tig0022500:88275-88294 | Msa1401210:CDS | 55.0% | |
| !! | GCTTTAGGAGGACTTGGTGC+AGG | + | tig0022500:88320-88339 | Msa1401210:CDS | 55.0% |
| GGGAGAGAGTTTGTAGCTGG+TGG | + | tig0022500:86705-86724 | Msa1401210:CDS | 55.0% | |
| AGAGGGATCAGGGAGATCCA+AGG | - | tig0022500:87699-87718 | None:intergenic | 55.0% | |
| ! | CATACGAGTCAGTTGGCTCC+GGG | - | tig0022500:87788-87807 | None:intergenic | 55.0% |
| GGCCCCTCTACTTCTTCACA+TGG | + | tig0022500:88275-88294 | Msa1401210:CDS | 55.0% | |
| !! | GCTTTAGGAGGACTTGGTGC+AGG | + | tig0022500:88320-88339 | Msa1401210:CDS | 55.0% |
| ! | GGTGGATTTGGAGGCACAGC+AGG | + | tig0022500:86723-86742 | Msa1401210:CDS | 60.0% |
| ! | AGTCAGTTGGCTCCGGGTCA+GGG | - | tig0022500:87782-87801 | None:intergenic | 60.0% |
| GGCCTTCGCGGCATTTATCG+AGG | + | tig0022500:88479-88498 | Msa1401210:CDS | 60.0% | |
| ! | GGTGGATTTGGAGGCACAGC+AGG | + | tig0022500:86723-86742 | Msa1401210:CDS | 60.0% |
| ! | AGTCAGTTGGCTCCGGGTCA+GGG | - | tig0022500:87782-87801 | None:intergenic | 60.0% |
| GGCCTTCGCGGCATTTATCG+AGG | + | tig0022500:88479-88498 | Msa1401210:CDS | 60.0% | |
| ! | GAGTCAGTTGGCTCCGGGTC+AGG | - | tig0022500:87783-87802 | None:intergenic | 65.0% |
| ! | GAGTCAGTTGGCTCCGGGTC+AGG | - | tig0022500:87783-87802 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022500 | gene | 86613 | 89035 | 86613 | ID=Msa1401210;Name=Msa1401210 |
| tig0022500 | mRNA | 86613 | 89035 | 86613 | ID=Msa1401210-mRNA-1;Parent=Msa1401210;Name=Msa1401210-mRNA-1;_AED=0.24;_eAED=0.24;_QI=53|1|1|1|1|1|2|149|297 |
| tig0022500 | exon | 86613 | 86902 | 86613 | ID=Msa1401210-mRNA-1:exon:18191;Parent=Msa1401210-mRNA-1 |
| tig0022500 | exon | 88230 | 89035 | 88230 | ID=Msa1401210-mRNA-1:exon:18192;Parent=Msa1401210-mRNA-1 |
| tig0022500 | five_prime_UTR | 86613 | 86665 | 86613 | ID=Msa1401210-mRNA-1:five_prime_utr;Parent=Msa1401210-mRNA-1 |
| tig0022500 | CDS | 86666 | 86902 | 86666 | ID=Msa1401210-mRNA-1:cds;Parent=Msa1401210-mRNA-1 |
| tig0022500 | CDS | 88230 | 88886 | 88230 | ID=Msa1401210-mRNA-1:cds;Parent=Msa1401210-mRNA-1 |
| tig0022500 | three_prime_UTR | 88887 | 89035 | 88887 | ID=Msa1401210-mRNA-1:three_prime_utr;Parent=Msa1401210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
