AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0625900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625900 MtrunA17_Chr4g0001471 96.859 382 9 1 1 382 1 379 0.0 754
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625900 AT1G73060.1 72.487 378 82 3 5 381 1 357 0.0 532

Find 209 sgRNAs with CRISPR-Local

Find 472 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATAGTAATAGCTATTA+TGG 0.126403 4_3:-5223249 Msa0625910:CDS
GGCAAGCTTGCTGCAGATTT+TGG 0.164117 4_3:+5222494 Msa0625900:three_prime_UTR
GGTGGGGACTTCAGAATTTA+AGG 0.170474 4_3:-5223705 Msa0625910:intron
CCTCAAAGTTCGTCAAAATT+TGG 0.172842 4_3:-5222191 Msa0625910:CDS
CCATAGACAGTAACAAAATT+TGG 0.208171 4_3:+5223726 Msa0625900:three_prime_UTR
TCATTATAATCATACATATT+TGG 0.213712 4_3:-5221621 None:intergenic
TAAACAGATACACCTGATTT+AGG 0.217240 4_3:-5216230 None:intergenic
TTCTGCAAGGGCGTTGGTTC+CGG 0.218060 4_3:-5222216 Msa0625910:CDS
CTGCATGGAGGAAGCATTTA+AGG 0.231374 4_3:-5222298 Msa0625910:CDS
ATATCTCTTCTAAGATCTTT+TGG 0.250851 4_3:+5222913 Msa0625900:three_prime_UTR
CAGCAACATTTCTTCATATA+AGG 0.266428 4_3:+5217593 Msa0625900:CDS
GACCCTCAACAATTCTTCTT+TGG 0.270857 4_3:-5220915 None:intergenic
ATACAGTGTGACAAACATTT+TGG 0.276062 4_3:-5221906 None:intergenic
TGAATTCGCAGTGCTGATTT+AGG 0.279676 4_3:+5219786 Msa0625900:intron
AGTGCTGATTTAGGCCTTCT+AGG 0.283454 4_3:+5219795 Msa0625900:intron
AAAGCGGTATTGCAAATCTT+TGG 0.283496 4_3:-5219826 None:intergenic
CAGAGAAGACTTACATAGTT+AGG 0.283571 4_3:-5222667 Msa0625910:CDS
AATAAAAGTGTTGGGGTTGA+TGG 0.284314 4_3:-5219645 None:intergenic
AGGGGTCGATGAAGAAAATT+TGG 0.285665 4_3:-5222947 Msa0625910:CDS
CCCCATAATAGCTATTACTA+TGG 0.288425 4_3:+5223247 Msa0625900:three_prime_UTR
TCTGCAAGGGCGTTGGTTCC+GGG 0.297464 4_3:-5222215 Msa0625910:CDS
CCACTGTAATTGACAATATA+AGG 0.298504 4_3:-5220025 None:intergenic
AAATTTGGGGAAAACTTCTA+TGG 0.302110 4_3:+5223741 Msa0625900:three_prime_UTR
GCTTTGTCCTCGTATTTCTT+TGG 0.302301 4_3:-5221502 None:intergenic
GCCTAGAGCCATGTATTTAT+AGG 0.310323 4_3:+5221874 Msa0625900:three_prime_UTR
CATAGACAGTAACAAAATTT+GGG 0.315147 4_3:+5223727 Msa0625900:three_prime_UTR
GTGTTGTGTGGCACTGAAAT+TGG 0.317840 4_3:-5216003 None:intergenic
GTGCTCTTTGCTCTTCTGAT+TGG 0.318517 4_3:-5223221 Msa0625910:CDS
AAATTGGCTCAGCACAAATA+TGG 0.323793 4_3:-5215987 None:intergenic
TCCATAGTAATAGCTATTAT+GGG 0.333113 4_3:-5223248 Msa0625910:CDS
AATCAGGTTCTGAGGGCTTT+GGG 0.347993 4_3:+5222078 Msa0625900:three_prime_UTR
AAATCAGGTTCTGAGGGCTT+TGG 0.350213 4_3:+5222077 Msa0625900:three_prime_UTR
CAAGATTAAATAAAAGTGTT+GGG 0.358312 4_3:-5219653 None:intergenic
AATTTCTACGAAGAGGCTAT+AGG 0.362385 4_3:+5220972 Msa0625900:CDS
TCAATCAATGTCGGTTCGTC+TGG 0.370374 4_3:-5223085 Msa0625910:CDS
CTTTGGGTGGGAAGCCTAGA+AGG 0.376335 4_3:-5219809 None:intergenic
ATACAACAGTCTATGCTTCT+CGG 0.384722 4_3:-5222163 Msa0625910:CDS
TCATTGAGAGCACTGAAATC+AGG 0.395867 4_3:+5222062 Msa0625900:three_prime_UTR
ATGAACAACATCTCATCAAC+TGG 0.395916 4_3:+5222635 Msa0625900:three_prime_UTR
AAGCGGTATTGCAAATCTTT+GGG 0.399943 4_3:-5219825 None:intergenic
GTGGGAAGAAGATTCTGATT+TGG 0.401550 4_3:+5221326 Msa0625900:CDS
TTAGGATCGAAACCACGATT+TGG 0.404526 4_3:-5216212 None:intergenic
TGAAGAAGTTCTTGCTTATG+AGG 0.407718 4_3:-5222032 None:intergenic
GAAGAATTGTTGAGGGTCCT+TGG 0.409519 4_3:+5220920 Msa0625900:CDS
ATTTCTACGAAGAGGCTATA+GGG 0.409617 4_3:+5220973 Msa0625900:CDS
AAGGTTGATGGCCTTACTAT+AGG 0.409941 4_3:+5218508 Msa0625900:intron
CTTGCAGAATCATCACTTCC+CGG 0.414286 4_3:+5222230 Msa0625900:three_prime_UTR
CGGTTTGCTGCTAATCTTCG+TGG 0.417955 4_3:-5222143 Msa0625910:CDS
TTCACGGTTCTTGTTGATGA+TGG 0.422131 4_3:+5222473 Msa0625900:three_prime_UTR
TACCTCACTCATAGCTTTCA+CGG 0.425446 4_3:+5222457 Msa0625900:three_prime_UTR
TTACTCCAGTGTTCTACATT+CGG 0.425820 4_3:+5219859 Msa0625900:CDS
TCCTGCAGGGATATCATCTA+AGG 0.428313 4_3:-5218533 None:intergenic
CTTATATGAAGAAATGTTGC+TGG 0.430887 4_3:-5217592 None:intergenic
CGTGGTTTCGATCCTAAATC+AGG 0.444850 4_3:+5216218 Msa0625900:CDS
TCCATTGTTGCGAATAGAAA+CGG 0.447494 4_3:+5222348 Msa0625900:three_prime_UTR
TGCCAACATTCAACTTGTCT+TGG 0.448124 4_3:+5218078 Msa0625900:CDS
TCATAAATCGTTCAGGTCCC+TGG 0.448130 4_3:+5220733 Msa0625900:intron
TTGCTTAAGCATCACCTGCC+AGG 0.449595 4_3:-5220751 None:intergenic
GCGAGAACTTCATAAGACTT+AGG 0.454079 4_3:-5216257 None:intergenic
GGGTGTTCAACCACTTGTAT+TGG 0.454525 4_3:+5222971 Msa0625900:three_prime_UTR
ATGGAAAACAAAACCTCTCC+AGG 0.456409 4_3:+5223266 Msa0625900:three_prime_UTR
TCAGTTGTTCAAAGCAGCTC+TGG 0.458399 4_3:+5218299 Msa0625900:CDS
CCATGTAGATGTGTTAAACT+TGG 0.461273 4_3:+5221799 Msa0625900:three_prime_UTR
GCATCATCGCTTGCTTCCTC+CGG 0.465125 4_3:-5223022 Msa0625910:CDS
GCTTGCTTCCTCCGGACCTA+AGG 0.465489 4_3:-5223014 Msa0625910:CDS
CATCTTCAAAGTCAAAATCA+AGG 0.471831 4_3:-5218591 None:intergenic
AATGAAGCCACAGGTCCTGC+AGG 0.472666 4_3:-5218547 None:intergenic
TCAAGATTAAATAAAAGTGT+TGG 0.473701 4_3:-5219654 None:intergenic
TACATTAATTAAACTGTGCA+TGG 0.475186 4_3:-5221687 None:intergenic
TTAGTAGTAGAAATTGAAGA+AGG 0.484021 4_3:-5216119 None:intergenic
TTCACCAGCTCTCTTGAACT+TGG 0.484399 4_3:+5222104 Msa0625900:three_prime_UTR
CTGACTCTTTCCCTTAGGTC+CGG 0.486118 4_3:+5223003 Msa0625900:three_prime_UTR
GACTTTGAAGATGAGAATGA+AGG 0.486387 4_3:+5218601 Msa0625900:CDS
AGCGTCTGACTCTTTCCCTT+AGG 0.488363 4_3:+5222998 Msa0625900:three_prime_UTR
AATAGCAGTACACGTGAACT+TGG 0.489119 4_3:+5218850 Msa0625900:CDS
ATATAGCTGTACCAGGGTAC+TGG 0.490688 4_3:-5220060 None:intergenic
CCTCCTCTTCTTGAAGTCCA+AGG 0.491038 4_3:-5220937 None:intergenic
TGAAGAAATGTTGCTGGGCA+AGG 0.493271 4_3:-5217586 None:intergenic
AGAGAAGACTTACATAGTTA+GGG 0.493349 4_3:-5222666 Msa0625910:CDS
GAAAGCATGTAAAGAAGTTG+AGG 0.502958 4_3:-5223938 Msa0625910:CDS
TTCTTAGAAGTGCAGGTCGT+TGG 0.503758 4_3:+5218791 Msa0625900:intron
GGTTCCTCTCTTTGCTAACA+TGG 0.504157 4_3:-5222741 Msa0625910:CDS
GAAGAAGGTGAAGAAGATAG+TGG 0.505084 4_3:-5216104 None:intergenic
GGCATTTGCTTTAGAAGCAG+AGG 0.505619 4_3:-5222432 Msa0625910:CDS
AATTCACATTTCTTGTATTG+TGG 0.506801 4_3:-5223910 Msa0625910:CDS
GACAATCGCAGCGGCAGCAG+TGG 0.513635 4_3:+5221991 Msa0625900:three_prime_UTR
AGTGCAACTCGCTTCACCCT+TGG 0.516086 4_3:+5220804 Msa0625900:CDS
TTTGTTTGAATTTAGTCAGA+AGG 0.518058 4_3:-5222879 Msa0625910:CDS
TCCTTAGATGATATCCCTGC+AGG 0.518676 4_3:+5218532 Msa0625900:CDS
ATTCGCAACAATGGAGAACA+TGG 0.522904 4_3:-5222340 Msa0625910:CDS
GACGAACCGACATTGATTGA+AGG 0.524267 4_3:+5223088 Msa0625900:three_prime_UTR
TGGAGGAAATGAGGATCAAA+AGG 0.526808 4_3:-5223065 Msa0625910:CDS
TCCGTTTCTATTCGCAACAA+TGG 0.528384 4_3:-5222349 Msa0625910:CDS
GTATTTGTCAGCTGCAGTGT+TGG 0.529453 4_3:-5221932 None:intergenic
GATAGTGGAGAAAGATGTGA+AGG 0.532078 4_3:-5216089 None:intergenic
AGAGTTGCTAACATGGGCAT+TGG 0.533440 4_3:-5222519 Msa0625910:CDS
TGATGATTCTGCAAGGGCGT+TGG 0.534637 4_3:-5222222 Msa0625910:CDS
GGAAGAAAAGTGAGGTTGTG+AGG 0.536168 4_3:-5216068 None:intergenic
TTTCACAGTACACTTGGTCA+GGG 0.537219 4_3:-5223308 Msa0625910:intron
GAAAGCTATGAGTGAGGTAG+AGG 0.537681 4_3:-5222453 Msa0625910:CDS
GAGATGTTGTTCATCATTCG+TGG 0.539150 4_3:-5222626 Msa0625910:CDS
CTAGAGAGTGTTACTACAGA+TGG 0.541421 4_3:-5222599 Msa0625910:CDS
AGTTCAAGTAAGCATATACC+AGG 0.542819 4_3:-5223886 Msa0625910:CDS
GTCTTCTCTGTATATAAACT+CGG 0.543647 4_3:+5222680 Msa0625900:three_prime_UTR
TAGACACATACATAGTAGAC+AGG 0.544177 4_3:-5222384 Msa0625910:CDS
ACATTAATTAAACTGTGCAT+GGG 0.546350 4_3:-5221686 None:intergenic
ATCAATGTCGGTTCGTCTGG+AGG 0.548219 4_3:-5223082 Msa0625910:CDS
TAGGCTTGTTGAATTTCGAT+AGG 0.548727 4_3:-5221856 None:intergenic
CATCTAAGGAGCCTATAGTA+AGG 0.549669 4_3:-5218519 None:intergenic
CGGTATTGCAAATCTTTGGG+TGG 0.549941 4_3:-5219822 None:intergenic
CAACACAATGCTACTATCCA+TGG 0.551674 4_3:+5216025 Msa0625900:exon
TTGTTTGAATTTAGTCAGAA+GGG 0.551796 4_3:-5222878 Msa0625910:intron
GCACTGAAATCAGGTTCTGA+GGG 0.551873 4_3:+5222071 Msa0625900:three_prime_UTR
AGAAGTGGCTTCTTCAACAG+AGG 0.551875 4_3:-5222572 Msa0625910:CDS
CTTGCTTCCTCCGGACCTAA+GGG 0.552988 4_3:-5223013 Msa0625910:CDS
AGCACTGAAATCAGGTTCTG+AGG 0.553944 4_3:+5222070 Msa0625900:three_prime_UTR
AAATCGTTCAGGTCCCTGGC+AGG 0.556462 4_3:+5220737 Msa0625900:intron
TTTGACGAACTTTGAGGACC+CGG 0.557037 4_3:+5222197 Msa0625900:three_prime_UTR
AAAGCATGTAAAGAAGTTGA+GGG 0.558423 4_3:-5223937 Msa0625910:CDS
TTGCAGAATCATCACTTCCC+GGG 0.558557 4_3:+5222231 Msa0625900:three_prime_UTR
TGCTTAAGCATCACCTGCCA+GGG 0.558854 4_3:-5220750 None:intergenic
GCCTATAAATACATGGCTCT+AGG 0.559293 4_3:-5221875 None:intergenic
TACAAATAGTGTCATGCTGA+AGG 0.559604 4_3:+5221969 Msa0625900:three_prime_UTR
GAAGAAATGTTGCTGGGCAA+GGG 0.561828 4_3:-5217585 None:intergenic
CGGTTCGTCTGGAGGAAATG+AGG 0.562037 4_3:-5223074 Msa0625910:CDS
GGCCAAAGAAGAATTGTTGA+GGG 0.563652 4_3:+5220913 Msa0625900:intron
TGGTTATATTGAGAAGTATG+TGG 0.564545 4_3:+5218870 Msa0625900:CDS
AGTACCAAGTTCAAGAGAGC+TGG 0.565279 4_3:-5222108 Msa0625910:CDS
TCTTCTGATTGGAAACATGC+AGG 0.565687 4_3:-5223210 Msa0625910:intron
ACTACAGATGGTGGAAGAAG+TGG 0.567107 4_3:-5222587 Msa0625910:CDS
AGCCAAGACAAGTTGAATGT+TGG 0.570943 4_3:-5218080 None:intergenic
TTATATGAAGAAATGTTGCT+GGG 0.572669 4_3:-5217591 None:intergenic
AAGATTAAATAAAAGTGTTG+GGG 0.574401 4_3:-5219652 None:intergenic
TTCACAGTACACTTGGTCAG+GGG 0.577586 4_3:-5223307 Msa0625910:intron
CCAAGTTTAACACATCTACA+TGG 0.577774 4_3:-5221799 None:intergenic
TGCTCATATGCAGAGAAAGA+AGG 0.579598 4_3:+5221429 Msa0625900:three_prime_UTR
TTTAAGGCGAAGGCGAAGGA+AGG 0.579780 4_3:-5222282 Msa0625910:CDS
GCTGTGTTTCGCCAGTACCC+TGG 0.579836 4_3:+5220049 Msa0625900:CDS
CCATAGTAATAGCTATTATG+GGG 0.581237 4_3:-5223247 Msa0625910:CDS
TTAATGAATATGTAGAGCGA+TGG 0.581715 4_3:-5218829 None:intergenic
ATGAATATGTAGAGCGATGG+AGG 0.586924 4_3:-5218826 None:intergenic
AGCATTTAAGGCGAAGGCGA+AGG 0.589667 4_3:-5222286 Msa0625910:CDS
TCTCTAGAATTTCTACGAAG+AGG 0.589731 4_3:+5220965 Msa0625900:CDS
CCTCTAGCAATGTTCTACTC+AGG 0.589927 4_3:-5221370 None:intergenic
ATTGCAGTCAAGCACGTGGT+GGG 0.590052 4_3:+5221308 Msa0625900:intron
CTGATCCGAATGTAGAACAC+TGG 0.590070 4_3:-5219864 None:intergenic
CAATCTATATTCAAGCTGCA+TGG 0.590954 4_3:-5222313 Msa0625910:CDS
GGAGGAAGCATTTAAGGCGA+AGG 0.591557 4_3:-5222292 Msa0625910:CDS
AATGCTACTATCCATGGCTA+TGG 0.594263 4_3:+5216031 Msa0625900:exon
ATATTACGAATCTGATTACC+CGG 0.594747 4_3:-5222249 Msa0625910:CDS
GGTATTGCAAATCTTTGGGT+GGG 0.594858 4_3:-5219821 None:intergenic
TAGCATTGTGTTGTGTTGTG+TGG 0.596955 4_3:-5216015 None:intergenic
GCGATGATGCATCCACTGCT+CGG 0.598686 4_3:+5223035 Msa0625900:three_prime_UTR
CCTTGGACTTCAAGAAGAGG+AGG 0.602803 4_3:+5220937 Msa0625900:CDS
ATCTTCAAAGTCAAAATCAA+GGG 0.605002 4_3:-5218590 None:intergenic
ATATACCAGGGTATGACAGT+TGG 0.606713 4_3:-5223873 Msa0625910:CDS
GACTAGTACCTACCCTGGAG+AGG 0.607375 4_3:-5223279 Msa0625910:CDS
CCTTATATTGTCAATTACAG+TGG 0.607987 4_3:+5220025 Msa0625900:CDS
TGATATCCCTGCAGGACCTG+TGG 0.610302 4_3:+5218540 Msa0625900:CDS
ATCTTGAGCTAGATACACTA+CGG 0.610940 4_3:+5219670 Msa0625900:CDS
AGGCCAAAGAAGAATTGTTG+AGG 0.612770 4_3:+5220912 Msa0625900:intron
GAGAGTGTTACTACAGATGG+TGG 0.613056 4_3:-5222596 Msa0625910:CDS
GACCTACCTTCAATCAATGT+CGG 0.613772 4_3:-5223094 Msa0625910:CDS
AAGGCGAAGGCGAAGGAAGG+AGG 0.615424 4_3:-5222279 Msa0625910:CDS
ACTCTTTCCCTTAGGTCCGG+AGG 0.617015 4_3:+5223006 Msa0625900:three_prime_UTR
AGATGACATAGCCATAGCCA+TGG 0.618729 4_3:-5216042 None:intergenic
AAAGGCGTGACTCCGAGCAG+TGG 0.621729 4_3:-5223047 Msa0625910:CDS
TCATGAACTTACTTCACCAA+GGG 0.622484 4_3:-5220820 None:intergenic
AAACAAAACCTCTCCAGGGT+AGG 0.625990 4_3:+5223271 Msa0625900:three_prime_UTR
GTGGTGAAGAGTTGCTAACA+TGG 0.626286 4_3:-5222526 Msa0625910:CDS
CGGGAAGTGATGATTCTGCA+AGG 0.626896 4_3:-5222229 Msa0625910:CDS
AAGACTTACATAGTTAGGGA+AGG 0.629987 4_3:-5222662 Msa0625910:CDS
ATGAAGCCACAGGTCCTGCA+GGG 0.630187 4_3:-5218546 None:intergenic
TACAAGTGGTTGAACACCCG+AGG 0.630986 4_3:-5222967 Msa0625910:CDS
ATTTGGAAGTATCATCTGCA+TGG 0.634373 4_3:+5221343 Msa0625900:CDS
TCTTCATCAGAGCCAAATCG+TGG 0.636063 4_3:+5216200 Msa0625900:CDS
GTGGTTAGCCTATAAATACA+TGG 0.636389 4_3:-5221882 None:intergenic
GACGCTACGACCAATACAAG+TGG 0.637852 4_3:-5222981 Msa0625910:CDS
CATTAATTAAACTGTGCATG+GGG 0.637978 4_3:-5221685 None:intergenic
TACACAAGCATAAGAACCAT+CGG 0.638469 4_3:-5220775 None:intergenic
TATTGCAGTCAAGCACGTGG+TGG 0.640120 4_3:+5221307 Msa0625900:intron
TTCATGAACTTACTTCACCA+AGG 0.640836 4_3:-5220821 None:intergenic
GTGATGCTTAAGCAAACCGA+TGG 0.643172 4_3:+5220759 Msa0625900:CDS
TGGAAAACAAAACCTCTCCA+GGG 0.644846 4_3:+5223267 Msa0625900:three_prime_UTR
TCGTCCATGTTAGCAAAGAG+AGG 0.645418 4_3:+5222737 Msa0625900:three_prime_UTR
GGGAAGTGATGATTCTGCAA+GGG 0.645571 4_3:-5222228 Msa0625910:CDS
GAGTAAATTGAGAAAGAAAG+CGG 0.647482 4_3:-5219842 None:intergenic
GGTCCTTGGACTTCAAGAAG+AGG 0.649587 4_3:+5220934 Msa0625900:CDS
TTTCTCCAACTGTCATACCC+TGG 0.659364 4_3:+5223868 Msa0625900:three_prime_UTR
TCGGATCAGAGATTATTCAA+AGG 0.660666 4_3:+5219878 Msa0625900:CDS
CTTGGACTTCAAGAAGAGGA+GGG 0.667611 4_3:+5220938 Msa0625900:CDS
ATAGACAGTAACAAAATTTG+GGG 0.668163 4_3:+5223728 Msa0625900:three_prime_UTR
CTTCTGACTAGTACCTACCC+TGG 0.672528 4_3:-5223284 Msa0625910:CDS
CCTGAGTAGAACATTGCTAG+AGG 0.675597 4_3:+5221370 Msa0625900:exon
ACAAGTGGTTGAACACCCGA+GGG 0.676415 4_3:-5222966 Msa0625910:CDS
AACCGTGAAAGCTATGAGTG+AGG 0.683734 4_3:-5222459 Msa0625910:CDS
TTCGCAACAATGGAGAACAT+GGG 0.684012 4_3:-5222339 Msa0625910:CDS
GATGTGAAGGAAGAAAAGTG+AGG 0.687118 4_3:-5216076 None:intergenic
AGCTGCTTTGAACAACTGAG+AGG 0.692149 4_3:-5218295 None:intergenic
GAGTAGAACATTGCTAGAGG+AGG 0.693732 4_3:+5221373 Msa0625900:exon
TGGTGAAGAGTTGCTAACAT+GGG 0.697702 4_3:-5222525 Msa0625910:CDS
TATTACGAATCTGATTACCC+GGG 0.702346 4_3:-5222248 Msa0625910:CDS
AACCGACATTGATTGAAGGT+AGG 0.702813 4_3:+5223092 Msa0625900:three_prime_UTR
TCTATATTCAAGCTGCATGG+AGG 0.707083 4_3:-5222310 Msa0625910:CDS
TGGAAGTATCATCTGCATGG+CGG 0.725682 4_3:+5221346 Msa0625900:CDS
TGATATTGCAGTCAAGCACG+TGG 0.735833 4_3:+5221304 Msa0625900:intron
ATGCTGAAGGACAATCGCAG+CGG 0.746460 4_3:+5221982 Msa0625900:three_prime_UTR
GTTCAAGTAAGCATATACCA+GGG 0.749555 4_3:-5223885 Msa0625910:CDS
CAAGTGGTTGAACACCCGAG+GGG 0.768003 4_3:-5222965 Msa0625910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAGCAAATTTAAAAT+CGG + chr4_3:5216970-5216989 Msa0625900:intron 10.0%
!! TATTATTCAATATTTATCTA+TGG + chr4_3:5217393-5217412 Msa0625900:intron 10.0%
!!! ATTTTAACAAATTTTCATTA+TGG + chr4_3:5217812-5217831 Msa0625900:intron 10.0%
!!! ATCTAAAATTCTATAAATTA+TGG + chr4_3:5223463-5223482 Msa0625900:intron 10.0%
!!! AATTTGAAACTATATTTGTA+GGG + chr4_3:5216833-5216852 Msa0625900:intron 15.0%
!! TAATTTATCCTACTAATATT+TGG - chr4_3:5217742-5217761 None:intergenic 15.0%
!! ATACATCAAATTAAATAACT+AGG - chr4_3:5219586-5219605 None:intergenic 15.0%
!!! ATATTTTCTCAAATAATATG+AGG + chr4_3:5219959-5219978 Msa0625900:intron 15.0%
!! CGATTTATGAAAAATATTTA+GGG - chr4_3:5220723-5220742 None:intergenic 15.0%
!! ACGATTTATGAAAAATATTT+AGG - chr4_3:5220724-5220743 None:intergenic 15.0%
!!! TATAAATATTTTAAGAAGGT+TGG - chr4_3:5221180-5221199 None:intergenic 15.0%
!!! CTTGTATAAATATTTTAAGA+AGG - chr4_3:5221184-5221203 None:intergenic 15.0%
!! TTTAAAAGAAAAAACTATGT+AGG - chr4_3:5221460-5221479 None:intergenic 15.0%
!! TCATTATAATCATACATATT+TGG - chr4_3:5221624-5221643 None:intergenic 15.0%
!! ATATTTATAAAGGATGATAT+AGG + chr4_3:5223414-5223433 Msa0625900:intron 15.0%
!! AAATATATATGTATTAGTGT+CGG - chr4_3:5223585-5223604 Msa0625910:intron 15.0%
!!! TTGCTATTTTCTCAAATTTT+CGG - chr4_3:5216597-5216616 None:intergenic 20.0%
!! TCTTGATATTGTGAAATTTA+TGG + chr4_3:5216739-5216758 Msa0625900:intron 20.0%
!! TTGTGAAATTTATGGATAAA+TGG + chr4_3:5216747-5216766 Msa0625900:intron 20.0%
!!! CAATTTGAAACTATATTTGT+AGG + chr4_3:5216832-5216851 Msa0625900:intron 20.0%
!! GTAATTAAAAGGAGATTATT+TGG + chr4_3:5217252-5217271 Msa0625900:intron 20.0%
!! TTCAATATTTATCTATGGAA+AGG + chr4_3:5217398-5217417 Msa0625900:intron 20.0%
!! AGAAAAAATGTTGAAAATGT+AGG - chr4_3:5217437-5217456 None:intergenic 20.0%
!!! TAATAACAATATTTTGCTTG+CGG + chr4_3:5217504-5217523 Msa0625900:intron 20.0%
!!! TGAATTATTTGTTTCAGTTT+TGG + chr4_3:5217658-5217677 Msa0625900:intron 20.0%
!!! TGAAAATTTGTTAAAATCCA+TGG - chr4_3:5217809-5217828 None:intergenic 20.0%
!! TCAAATTCCTAAATATTTCA+AGG + chr4_3:5218033-5218052 Msa0625900:intron 20.0%
!! CAAATTCCTAAATATTTCAA+GGG + chr4_3:5218034-5218053 Msa0625900:intron 20.0%
!!! GAATATTCTTATTTACTATG+AGG + chr4_3:5218346-5218365 Msa0625900:intron 20.0%
!! TATGATATCTTCATTCTTTA+TGG - chr4_3:5218439-5218458 None:intergenic 20.0%
!!! TTCATCTTTATTTTGTTTCA+AGG + chr4_3:5218489-5218508 Msa0625900:intron 20.0%
!!! AAATTTTTCTTGAGTCATAT+TGG + chr4_3:5218710-5218729 Msa0625900:intron 20.0%
!!! AAAATCATGAAACCTTTTAA+TGG - chr4_3:5218909-5218928 None:intergenic 20.0%
!!! TTCATGATTTTTTATCTGTT+CGG + chr4_3:5218918-5218937 Msa0625900:intron 20.0%
!! ATTCTCGAATTAGAAATATA+GGG - chr4_3:5219294-5219313 None:intergenic 20.0%
!! TAAATAGTAAAACTTGATGT+AGG + chr4_3:5219452-5219471 Msa0625900:intron 20.0%
!!! AAGATTAAATAAAAGTGTTG+GGG - chr4_3:5219655-5219674 None:intergenic 20.0%
!!! CAAGATTAAATAAAAGTGTT+GGG - chr4_3:5219656-5219675 None:intergenic 20.0%
!!! TCAAGATTAAATAAAAGTGT+TGG - chr4_3:5219657-5219676 None:intergenic 20.0%
!!! TTGTACTCTTTTTTGTTTAT+TGG + chr4_3:5219699-5219718 Msa0625900:intron 20.0%
!! CAGATAATGATAAATATCTA+GGG - chr4_3:5219927-5219946 None:intergenic 20.0%
!! TCAGATAATGATAAATATCT+AGG - chr4_3:5219928-5219947 None:intergenic 20.0%
!! TCAAATTGTCAATATGAAAA+AGG + chr4_3:5220563-5220582 Msa0625900:intron 20.0%
!! CAAATTGTCAATATGAAAAA+GGG + chr4_3:5220564-5220583 Msa0625900:intron 20.0%
!! ATTCATTTGTGTAATGAATT+TGG + chr4_3:5220598-5220617 Msa0625900:intron 20.0%
!! ATAAAAATAAACTAGCTATC+TGG - chr4_3:5220651-5220670 None:intergenic 20.0%
!!! ATATTTTTCATAAATCGTTC+AGG + chr4_3:5220726-5220745 Msa0625900:intron 20.0%
!! ATACCTTATCTAATATCTAT+TGG + chr4_3:5220882-5220901 Msa0625900:intron 20.0%
!!! ATGTGTAAATTTTACATAAG+AGG - chr4_3:5221091-5221110 None:intergenic 20.0%
!! ATAGGATCATAAATCATATT+TGG + chr4_3:5221239-5221258 Msa0625900:intron 20.0%
!! ATGTTTACAGTAAAAACTTT+CGG + chr4_3:5223183-5223202 Msa0625900:intron 20.0%
!! GAATCAAAGCATATTTATAA+AGG + chr4_3:5223404-5223423 Msa0625900:intron 20.0%
!!! TTATAAACTGAGTGTTTTAT+AGG + chr4_3:5223622-5223641 Msa0625900:intron 20.0%
! TTAGTAGTAGAAATTGAAGA+AGG - chr4_3:5216122-5216141 None:intergenic 25.0%
! AGAATGAAAATTAAACGTAC+GGG - chr4_3:5216349-5216368 None:intergenic 25.0%
! GAGAATGAAAATTAAACGTA+CGG - chr4_3:5216350-5216369 None:intergenic 25.0%
! TATTCATTAATTGACTGATG+TGG - chr4_3:5216516-5216535 None:intergenic 25.0%
! AACTATATTTGTAGGGAATT+TGG + chr4_3:5216840-5216859 Msa0625900:intron 25.0%
! TCAATATTTGAATCCAACAT+TGG + chr4_3:5216917-5216936 Msa0625900:intron 25.0%
!!! TAGTTGCTTTGCTATTATTA+TGG + chr4_3:5217083-5217102 Msa0625900:intron 25.0%
! TGTATTCCAAATTACTTGTT+TGG + chr4_3:5217155-5217174 Msa0625900:intron 25.0%
! AAAGATCCAAACAAGTAATT+TGG - chr4_3:5217164-5217183 None:intergenic 25.0%
!!! TAGAGAATCTATTTTTGTGT+AGG - chr4_3:5217189-5217208 None:intergenic 25.0%
! GGGACATAATAGTAATTAAA+AGG + chr4_3:5217241-5217260 Msa0625900:intron 25.0%
! TTTGGTTGAGAGATAATATT+TGG + chr4_3:5217270-5217289 Msa0625900:intron 25.0%
! TTATATGAAGAAATGTTGCT+GGG - chr4_3:5217594-5217613 None:intergenic 25.0%
!! TGTATATAGGTCTATGTTTT+TGG + chr4_3:5217689-5217708 Msa0625900:intron 25.0%
! ACAAAGTTCCAAATATTAGT+AGG + chr4_3:5217731-5217750 Msa0625900:intron 25.0%
! TTAAAATCCATGGTAAACAA+AGG - chr4_3:5217799-5217818 None:intergenic 25.0%
!! ATATTTTGCTAATCAGAAGT+AGG - chr4_3:5217863-5217882 None:intergenic 25.0%
!!! TTATTTTGTTTCAAGGTTGA+TGG + chr4_3:5218496-5218515 Msa0625900:intron 25.0%
! ATCTTCAAAGTCAAAATCAA+GGG - chr4_3:5218593-5218612 None:intergenic 25.0%
! TAATGCATAAGTTTCAAACA+TGG - chr4_3:5218683-5218702 None:intergenic 25.0%
!! ATTAAATTTCTTAGAAGTGC+AGG + chr4_3:5218784-5218803 Msa0625900:intron 25.0%
!!! GTTCTTTCATTTGTTGTTTT+TGG + chr4_3:5219069-5219088 Msa0625900:intron 25.0%
! TAGTATGATTATATTCCCTT+GGG - chr4_3:5219218-5219237 None:intergenic 25.0%
! TTAGTATGATTATATTCCCT+TGG - chr4_3:5219219-5219238 None:intergenic 25.0%
! TTCTCGAATTAGAAATATAG+GGG - chr4_3:5219293-5219312 None:intergenic 25.0%
! CATTCTCGAATTAGAAATAT+AGG - chr4_3:5219295-5219314 None:intergenic 25.0%
!! TTATATTGTGCTATTGGTAA+TGG - chr4_3:5219329-5219348 None:intergenic 25.0%
!! TTTGGTTTATATTGTGCTAT+TGG - chr4_3:5219335-5219354 None:intergenic 25.0%
!! TCAAGTTTTACTATTTACTG+CGG - chr4_3:5219449-5219468 None:intergenic 25.0%
! GAAATGTGAGTTTCTTAATA+TGG + chr4_3:5219508-5219527 Msa0625900:intron 25.0%
!! TTCTATTACTACTATTTTGC+AGG + chr4_3:5219611-5219630 Msa0625900:intron 25.0%
! ATAAATATATAGCTGTACCA+GGG - chr4_3:5220069-5220088 None:intergenic 25.0%
! TATAAATATATAGCTGTACC+AGG - chr4_3:5220070-5220089 None:intergenic 25.0%
! ATCATGTATCACAGATTATT+AGG - chr4_3:5220151-5220170 None:intergenic 25.0%
! TGTTAATATTAGATAACTGG+TGG - chr4_3:5220278-5220297 None:intergenic 25.0%
!! TGGTGTTAATATTAGATAAC+TGG - chr4_3:5220281-5220300 None:intergenic 25.0%
! TCAGTATATGTAACAACAAT+AGG + chr4_3:5220320-5220339 Msa0625900:intron 25.0%
! AATGAGAAATAGAGGAAATA+TGG - chr4_3:5220424-5220443 None:intergenic 25.0%
! CACAAAGAATTATCAAAATC+TGG + chr4_3:5220478-5220497 Msa0625900:intron 25.0%
! AGATAATATGCAATAAGGTA+AGG - chr4_3:5220513-5220532 None:intergenic 25.0%
! GATACAGATAATATGCAATA+AGG - chr4_3:5220518-5220537 None:intergenic 25.0%
!! ATTGGCAAATAAAAGCATAT+TGG - chr4_3:5220687-5220706 None:intergenic 25.0%
! TCACAGTTAGTAAGAAAATA+AGG - chr4_3:5220852-5220871 None:intergenic 25.0%
! AAGCCAATAGATATTAGATA+AGG - chr4_3:5220888-5220907 None:intergenic 25.0%
! TTATTTCAACCATAGCAAAA+AGG - chr4_3:5221048-5221067 None:intergenic 25.0%
!! AGCCAAATTTTCATTATAGT+GGG + chr4_3:5221211-5221230 Msa0625900:intron 25.0%
! AACCCACTATAATGAAAATT+TGG - chr4_3:5221216-5221235 None:intergenic 25.0%
!!! TCATTATAGTGGGTTATTAT+AGG + chr4_3:5221221-5221240 Msa0625900:intron 25.0%
! ACATTAATTAAACTGTGCAT+GGG - chr4_3:5221689-5221708 None:intergenic 25.0%
! TACATTAATTAAACTGTGCA+TGG - chr4_3:5221690-5221709 None:intergenic 25.0%
! GTGTATGACATATATTATTC+AGG - chr4_3:5222765-5222784 Msa0625910:intron 25.0%
! TGAGAAAATAAAGAGTTAGA+AGG + chr4_3:5222795-5222814 Msa0625900:intron 25.0%
! TTGTTTGAATTTAGTCAGAA+GGG - chr4_3:5222881-5222900 Msa0625910:CDS 25.0%
! TTTGTTTGAATTTAGTCAGA+AGG - chr4_3:5222882-5222901 Msa0625910:CDS 25.0%
!!! ATATCTCTTCTAAGATCTTT+TGG + chr4_3:5222913-5222932 Msa0625900:three_prime_UTR 25.0%
! TCCATAGTAATAGCTATTAT+GGG - chr4_3:5223251-5223270 Msa0625910:CDS 25.0%
! TTCCATAGTAATAGCTATTA+TGG - chr4_3:5223252-5223271 Msa0625910:CDS 25.0%
!!! GTTTTATAGGTGTTATAAAG+AGG + chr4_3:5223635-5223654 Msa0625900:intron 25.0%
! CATAGACAGTAACAAAATTT+GGG + chr4_3:5223727-5223746 Msa0625900:three_prime_UTR 25.0%
! ATAGACAGTAACAAAATTTG+GGG + chr4_3:5223728-5223747 Msa0625900:three_prime_UTR 25.0%
! AATTCACATTTCTTGTATTG+TGG - chr4_3:5223913-5223932 Msa0625910:CDS 25.0%
! TGATGAAGAAGCTTCTTTTT+CGG - chr4_3:5216189-5216208 None:intergenic 30.0%
TAAACAGATACACCTGATTT+AGG - chr4_3:5216233-5216252 None:intergenic 30.0%
GAGTGTAAGTAGTTTATGTT+TGG + chr4_3:5216398-5216417 Msa0625900:intron 30.0%
GTTCTATGTAGTACATATCA+CGG - chr4_3:5216696-5216715 None:intergenic 30.0%
!! TAGAACTAGTCTTATCACTA+TGG + chr4_3:5216710-5216729 Msa0625900:intron 30.0%
CTGTCAAAATCTTTATGTTG+CGG + chr4_3:5216790-5216809 Msa0625900:intron 30.0%
GGATTCAAATATTGATCAAC+TGG - chr4_3:5216912-5216931 None:intergenic 30.0%
! AAATTTAAAATCGGAGCTGT+TGG + chr4_3:5216979-5216998 Msa0625900:intron 30.0%
! AATTTAAAATCGGAGCTGTT+GGG + chr4_3:5216980-5216999 Msa0625900:intron 30.0%
! TTGCTATTATTATGGATGCA+TGG + chr4_3:5217091-5217110 Msa0625900:intron 30.0%
CTAAAGTCACCAAATATCAA+CGG - chr4_3:5217212-5217231 None:intergenic 30.0%
CAAAATGTAGACAATCGAAA+GGG + chr4_3:5217320-5217339 Msa0625900:intron 30.0%
AGGAACAAAAAAGATCAGAA+TGG - chr4_3:5217548-5217567 None:intergenic 30.0%
!!! ATTCTGATCTTTTTTGTTCC+TGG + chr4_3:5217547-5217566 Msa0625900:intron 30.0%
!!! TTCTGATCTTTTTTGTTCCT+GGG + chr4_3:5217548-5217567 Msa0625900:intron 30.0%
CTTATATGAAGAAATGTTGC+TGG - chr4_3:5217595-5217614 None:intergenic 30.0%
CAGCAACATTTCTTCATATA+AGG + chr4_3:5217593-5217612 Msa0625900:CDS 30.0%
TTTGGTCCTTCATTGTATAT+AGG + chr4_3:5217676-5217695 Msa0625900:intron 30.0%
CATAGACCTATATACAATGA+AGG - chr4_3:5217685-5217704 None:intergenic 30.0%
TTGTAGCTAAGCTAATATGA+TGG + chr4_3:5217911-5217930 Msa0625900:intron 30.0%
TGTAGCTAAGCTAATATGAT+GGG + chr4_3:5217912-5217931 Msa0625900:intron 30.0%
GAAGATCCCTTGAAATATTT+AGG - chr4_3:5218043-5218062 None:intergenic 30.0%
!!! TAGATTTGGGACTTTTTTGT+AGG + chr4_3:5218242-5218261 Msa0625900:intron 30.0%
! CCAATAGTGTGATCATTTTA+TGG - chr4_3:5218389-5218408 None:intergenic 30.0%
CCATAAAATGATCACACTAT+TGG + chr4_3:5218386-5218405 Msa0625900:intron 30.0%
ATGAAACTTCAGAATATGAC+AGG - chr4_3:5218474-5218493 None:intergenic 30.0%
CATCTTCAAAGTCAAAATCA+AGG - chr4_3:5218594-5218613 None:intergenic 30.0%
TTAATGAATATGTAGAGCGA+TGG - chr4_3:5218832-5218851 None:intergenic 30.0%
! TGGTTATATTGAGAAGTATG+TGG + chr4_3:5218870-5218889 Msa0625900:CDS 30.0%
! ATATTGAGAAGTATGTGGTA+TGG + chr4_3:5218875-5218894 Msa0625900:intron 30.0%
CATTCTTATCTGTATTAGCT+TGG + chr4_3:5218971-5218990 Msa0625900:intron 30.0%
!!! GACGTTTATTTTTTCTCCAT+TGG + chr4_3:5219014-5219033 Msa0625900:intron 30.0%
TGCACATTATTTATCACCAA+TGG - chr4_3:5219033-5219052 None:intergenic 30.0%
AATTTATACTGTCAAACCCA+AGG + chr4_3:5219199-5219218 Msa0625900:intron 30.0%
ATTTATACTGTCAAACCCAA+GGG + chr4_3:5219200-5219219 Msa0625900:intron 30.0%
! ACAGGGATTATTCTTTCTTT+TGG - chr4_3:5219353-5219372 None:intergenic 30.0%
TTCAGTATAATACAGCTGTA+GGG - chr4_3:5219376-5219395 None:intergenic 30.0%
GAGTAAATTGAGAAAGAAAG+CGG - chr4_3:5219845-5219864 None:intergenic 30.0%
CCACTGTAATTGACAATATA+AGG - chr4_3:5220028-5220047 None:intergenic 30.0%
CCTTATATTGTCAATTACAG+TGG + chr4_3:5220025-5220044 Msa0625900:CDS 30.0%
GAGAAGTTGTGTTAAAAGAA+AGG + chr4_3:5220228-5220247 Msa0625900:intron 30.0%
ATTGTCAATATGAAAAAGGG+AGG + chr4_3:5220567-5220586 Msa0625900:intron 30.0%
! TAGGGCATCATTCATATAAT+TGG - chr4_3:5220705-5220724 None:intergenic 30.0%
!! TAATATCTATTGGCTTGTCT+AGG + chr4_3:5220892-5220911 Msa0625900:intron 30.0%
GTAAAATTTACACATTCCTG+TGG + chr4_3:5221096-5221115 Msa0625900:intron 30.0%
GCACATTAGGGAATATAATT+GGG - chr4_3:5221150-5221169 None:intergenic 30.0%
TGCACATTAGGGAATATAAT+TGG - chr4_3:5221151-5221170 None:intergenic 30.0%
GTTGGTATTTATGCACATTA+GGG - chr4_3:5221162-5221181 None:intergenic 30.0%
! GAGCCAAATTTTCATTATAG+TGG + chr4_3:5221210-5221229 Msa0625900:intron 30.0%
!! GTTGGTAACAGATTTAAAAC+TGG - chr4_3:5221278-5221297 None:intergenic 30.0%
CATTAATTAAACTGTGCATG+GGG - chr4_3:5221688-5221707 None:intergenic 30.0%
! ATACAGTGTGACAAACATTT+TGG - chr4_3:5221909-5221928 None:intergenic 30.0%
ATATTACGAATCTGATTACC+CGG - chr4_3:5222252-5222271 Msa0625910:CDS 30.0%
AGAGAAGACTTACATAGTTA+GGG - chr4_3:5222669-5222688 Msa0625910:CDS 30.0%
GTCTTCTCTGTATATAAACT+CGG + chr4_3:5222680-5222699 Msa0625900:three_prime_UTR 30.0%
CCTTGTGTTATAAATGCAAT+TGG - chr4_3:5223123-5223142 Msa0625910:intron 30.0%
CCAATTGCATTTATAACACA+AGG + chr4_3:5223120-5223139 Msa0625900:intron 30.0%
CCATAGTAATAGCTATTATG+GGG - chr4_3:5223250-5223269 Msa0625910:CDS 30.0%
AAGCAAAACAGAAGGATATT+TGG + chr4_3:5223330-5223349 Msa0625900:intron 30.0%
TTGTAGATTCACTTGATGTT+GGG - chr4_3:5223444-5223463 Msa0625910:intron 30.0%
ATTGTAGATTCACTTGATGT+TGG - chr4_3:5223445-5223464 Msa0625910:intron 30.0%
TCTGATCTTCATATCAAAGT+CGG - chr4_3:5223508-5223527 Msa0625910:intron 30.0%
ATGGCTAATGTGAAAAACAT+AGG + chr4_3:5223556-5223575 Msa0625900:intron 30.0%
! ATTTTGTTACTGTCTATGGT+GGG - chr4_3:5223725-5223744 Msa0625910:CDS 30.0%
! AATTTTGTTACTGTCTATGG+TGG - chr4_3:5223726-5223745 Msa0625910:CDS 30.0%
! CCAAATTTTGTTACTGTCTA+TGG - chr4_3:5223729-5223748 Msa0625910:CDS 30.0%
CCATAGACAGTAACAAAATT+TGG + chr4_3:5223726-5223745 Msa0625900:three_prime_UTR 30.0%
AAATTTGGGGAAAACTTCTA+TGG + chr4_3:5223741-5223760 Msa0625900:three_prime_UTR 30.0%
!! GATAACTCAGCTTTTAACTA+TGG - chr4_3:5223805-5223824 Msa0625910:CDS 30.0%
! AAATTGGCTCAGCACAAATA+TGG - chr4_3:5215990-5216009 None:intergenic 35.0%
! CTCAATTTTGCTCTTCAAGA+TGG + chr4_3:5216299-5216318 Msa0625900:CDS 35.0%
!!! AATTTTCGGTGTCTACATGT+CGG - chr4_3:5216583-5216602 None:intergenic 35.0%
TGTCATATTACTCAGTGTAG+TGG + chr4_3:5216643-5216662 Msa0625900:intron 35.0%
CAAGCTAATGCATGAATACA+AGG - chr4_3:5216886-5216905 None:intergenic 35.0%
AAATCAGAGTCATCCAATGT+TGG - chr4_3:5216933-5216952 None:intergenic 35.0%
! CTATTGACTATGTGAACACA+TGG + chr4_3:5217024-5217043 Msa0625900:intron 35.0%
ATGGATTCTTTGACTGTAGT+AGG + chr4_3:5217043-5217062 Msa0625900:intron 35.0%
GATTCTCTACCGTTGATATT+TGG + chr4_3:5217200-5217219 Msa0625900:intron 35.0%
! TTGGTGACTTTAGTGTACTT+AGG + chr4_3:5217219-5217238 Msa0625900:intron 35.0%
TGGTGACTTTAGTGTACTTA+GGG + chr4_3:5217220-5217239 Msa0625900:intron 35.0%
! CCTTTCGATTGTCTACATTT+TGG - chr4_3:5217322-5217341 None:intergenic 35.0%
CCAAAATGTAGACAATCGAA+AGG + chr4_3:5217319-5217338 Msa0625900:intron 35.0%
!!! TCTGATCTTTTTTGTTCCTG+GGG + chr4_3:5217549-5217568 Msa0625900:intron 35.0%
! TAAGGTACTATTCTTTGCTC+TGG + chr4_3:5217611-5217630 Msa0625900:intron 35.0%
! ATTGACAGTTGACGTTTTTG+AGG + chr4_3:5217975-5217994 Msa0625900:intron 35.0%
! TTTTCTTACTATGCAAGCTC+TGG - chr4_3:5218137-5218156 None:intergenic 35.0%
!! GAAGTACTTGTTGCTTTGAA+AGG - chr4_3:5218181-5218200 None:intergenic 35.0%
!!! GAAGCTTTTCTGGTTTATCA+GGG - chr4_3:5218272-5218291 None:intergenic 35.0%
! GACTTTGAAGATGAGAATGA+AGG + chr4_3:5218601-5218620 Msa0625900:CDS 35.0%
! ATGAAACCTTTTAATGGCAG+AGG - chr4_3:5218903-5218922 None:intergenic 35.0%
! TAGCTTGGTCTTTGATTCTT+TGG + chr4_3:5218986-5219005 Msa0625900:intron 35.0%
! TTGGTCTTTGATTCTTTGGT+AGG + chr4_3:5218990-5219009 Msa0625900:intron 35.0%
AATCATACTAAGAACACCTG+AGG + chr4_3:5219228-5219247 Msa0625900:intron 35.0%
CTTCAGTATAATACAGCTGT+AGG - chr4_3:5219377-5219396 None:intergenic 35.0%
!! TGACTTTTGATAGCCTTTGT+TGG + chr4_3:5219484-5219503 Msa0625900:intron 35.0%
AACTCACATTTCACCAACAA+AGG - chr4_3:5219500-5219519 None:intergenic 35.0%
AACACGTTAATTATGTGCAC+TGG + chr4_3:5219555-5219574 Msa0625900:intron 35.0%
!! AATAAAAGTGTTGGGGTTGA+TGG - chr4_3:5219648-5219667 None:intergenic 35.0%
ATCTTGAGCTAGATACACTA+CGG + chr4_3:5219670-5219689 Msa0625900:CDS 35.0%
AAGCGGTATTGCAAATCTTT+GGG - chr4_3:5219828-5219847 None:intergenic 35.0%
AAAGCGGTATTGCAAATCTT+TGG - chr4_3:5219829-5219848 None:intergenic 35.0%
TTACTCCAGTGTTCTACATT+CGG + chr4_3:5219859-5219878 Msa0625900:CDS 35.0%
TCGGATCAGAGATTATTCAA+AGG + chr4_3:5219878-5219897 Msa0625900:CDS 35.0%
AGGGACTATTCAATAGAGAA+GGG - chr4_3:5219908-5219927 None:intergenic 35.0%
TAGGGACTATTCAATAGAGA+AGG - chr4_3:5219909-5219928 None:intergenic 35.0%
TATTAACACCAGATCTTGCA+AGG + chr4_3:5220290-5220309 Msa0625900:intron 35.0%
AAAATCTTCCTTGCAAGATC+TGG - chr4_3:5220301-5220320 None:intergenic 35.0%
! TGCTTACATACTTCCCTTTT+TGG + chr4_3:5220363-5220382 Msa0625900:intron 35.0%
AATTACTCCCATGCCAAAAA+GGG - chr4_3:5220379-5220398 None:intergenic 35.0%
TAATTACTCCCATGCCAAAA+AGG - chr4_3:5220380-5220399 None:intergenic 35.0%
GAGTAATTAGTAAGGGAAAG+AGG + chr4_3:5220391-5220410 Msa0625900:intron 35.0%
TAGTAAGGGAAAGAGGAATA+TGG + chr4_3:5220398-5220417 Msa0625900:intron 35.0%
TGTGACTTACTTCAAGTCAA+AGG - chr4_3:5220462-5220481 None:intergenic 35.0%
TGTATCACCTGAAAAAAGCA+GGG + chr4_3:5220532-5220551 Msa0625900:intron 35.0%
TACACAAGCATAAGAACCAT+CGG - chr4_3:5220778-5220797 None:intergenic 35.0%
TCATGAACTTACTTCACCAA+GGG - chr4_3:5220823-5220842 None:intergenic 35.0%
TTCATGAACTTACTTCACCA+AGG - chr4_3:5220824-5220843 None:intergenic 35.0%
ATGCATAAAAGCAACGCAAA+CGG - chr4_3:5221017-5221036 None:intergenic 35.0%
! GGTTGGTATTTATGCACATT+AGG - chr4_3:5221163-5221182 None:intergenic 35.0%
! TTAAAACTGGACTAGAGACA+TGG - chr4_3:5221265-5221284 None:intergenic 35.0%
ACTGCAATATCACAAGATGT+TGG - chr4_3:5221296-5221315 None:intergenic 35.0%
!! ATTTGGAAGTATCATCTGCA+TGG + chr4_3:5221343-5221362 Msa0625900:CDS 35.0%
! ACTTTTGCCAAAGAAATACG+AGG + chr4_3:5221495-5221514 Msa0625900:three_prime_UTR 35.0%
CCAAGTTTAACACATCTACA+TGG - chr4_3:5221802-5221821 None:intergenic 35.0%
CCATGTAGATGTGTTAAACT+TGG + chr4_3:5221799-5221818 Msa0625900:three_prime_UTR 35.0%
!! TAGGCTTGTTGAATTTCGAT+AGG - chr4_3:5221859-5221878 None:intergenic 35.0%
!! GTGGTTAGCCTATAAATACA+TGG - chr4_3:5221885-5221904 None:intergenic 35.0%
TACAAATAGTGTCATGCTGA+AGG + chr4_3:5221969-5221988 Msa0625900:three_prime_UTR 35.0%
TGAAGAAGTTCTTGCTTATG+AGG - chr4_3:5222035-5222054 None:intergenic 35.0%
ATACAACAGTCTATGCTTCT+CGG - chr4_3:5222166-5222185 Msa0625910:CDS 35.0%
CCTCAAAGTTCGTCAAAATT+TGG - chr4_3:5222194-5222213 Msa0625910:CDS 35.0%
!! CCAAATTTTGACGAACTTTG+AGG + chr4_3:5222191-5222210 Msa0625900:three_prime_UTR 35.0%
TATTACGAATCTGATTACCC+GGG - chr4_3:5222251-5222270 Msa0625910:CDS 35.0%
CAATCTATATTCAAGCTGCA+TGG - chr4_3:5222316-5222335 Msa0625910:CDS 35.0%
TCCATTGTTGCGAATAGAAA+CGG + chr4_3:5222348-5222367 Msa0625900:three_prime_UTR 35.0%
TAGACACATACATAGTAGAC+AGG - chr4_3:5222387-5222406 Msa0625910:CDS 35.0%
! TTGAAGGAAGGTGATTTTTG+TGG - chr4_3:5222548-5222567 Msa0625910:CDS 35.0%
ATGAACAACATCTCATCAAC+TGG + chr4_3:5222635-5222654 Msa0625900:three_prime_UTR 35.0%
AAGACTTACATAGTTAGGGA+AGG - chr4_3:5222665-5222684 Msa0625910:CDS 35.0%
CAGAGAAGACTTACATAGTT+AGG - chr4_3:5222670-5222689 Msa0625910:CDS 35.0%
TGCAATGAGAAATCTCAGAA+AGG + chr4_3:5222831-5222850 Msa0625900:intron 35.0%
CCCCATAATAGCTATTACTA+TGG + chr4_3:5223247-5223266 Msa0625900:three_prime_UTR 35.0%
!! TTTGCTTTTCACAGTACACT+TGG - chr4_3:5223317-5223336 Msa0625910:intron 35.0%
ACTGTGAAAAGCAAAACAGA+AGG + chr4_3:5223322-5223341 Msa0625900:intron 35.0%
! TTTTCACATTAGCCATGTAG+AGG - chr4_3:5223552-5223571 Msa0625910:intron 35.0%
TGTTATAAAGAGGACTCATG+TGG + chr4_3:5223645-5223664 Msa0625900:intron 35.0%
! TTTTGTTACTGTCTATGGTG+GGG - chr4_3:5223724-5223743 Msa0625910:CDS 35.0%
GTTCAAGTAAGCATATACCA+GGG - chr4_3:5223888-5223907 Msa0625910:CDS 35.0%
AGTTCAAGTAAGCATATACC+AGG - chr4_3:5223889-5223908 Msa0625910:CDS 35.0%
TAGCATTGTGTTGTGTTGTG+TGG - chr4_3:5216018-5216037 None:intergenic 40.0%
CAACACAATGCTACTATCCA+TGG + chr4_3:5216025-5216044 Msa0625900:exon 40.0%
AATGCTACTATCCATGGCTA+TGG + chr4_3:5216031-5216050 Msa0625900:exon 40.0%
GATGTGAAGGAAGAAAAGTG+AGG - chr4_3:5216079-5216098 None:intergenic 40.0%
!! GATAGTGGAGAAAGATGTGA+AGG - chr4_3:5216092-5216111 None:intergenic 40.0%
GAAGAAGGTGAAGAAGATAG+TGG - chr4_3:5216107-5216126 None:intergenic 40.0%
TTAGGATCGAAACCACGATT+TGG - chr4_3:5216215-5216234 None:intergenic 40.0%
GCGAGAACTTCATAAGACTT+AGG - chr4_3:5216260-5216279 None:intergenic 40.0%
GTACATATCACGGACACTTA+CGG - chr4_3:5216686-5216705 None:intergenic 40.0%
!! GCTGTTGGGTATTGATTCTA+TGG + chr4_3:5216994-5217013 Msa0625900:intron 40.0%
GGTGACTTTAGTGTACTTAG+GGG + chr4_3:5217221-5217240 Msa0625900:intron 40.0%
AAGTAGGCATAGATGAACTG+AGG - chr4_3:5217847-5217866 None:intergenic 40.0%
TGCCAACATTCAACTTGTCT+TGG + chr4_3:5218078-5218097 Msa0625900:CDS 40.0%
! AGCCAAGACAAGTTGAATGT+TGG - chr4_3:5218083-5218102 None:intergenic 40.0%
GGCTGTTGTAAAAAAGCTAC+AGG + chr4_3:5218099-5218118 Msa0625900:CDS 40.0%
TCCGAGATGTCACTAGATTT+GGG + chr4_3:5218229-5218248 Msa0625900:intron 40.0%
TCCCAAATCTAGTGACATCT+CGG - chr4_3:5218233-5218252 None:intergenic 40.0%
!!! CGAAGCTTTTCTGGTTTATC+AGG - chr4_3:5218273-5218292 None:intergenic 40.0%
!! AAGGTTGATGGCCTTACTAT+AGG + chr4_3:5218508-5218527 Msa0625900:intron 40.0%
CATCTAAGGAGCCTATAGTA+AGG - chr4_3:5218522-5218541 None:intergenic 40.0%
GATCTGAAAAATGAAGCCAC+AGG - chr4_3:5218559-5218578 None:intergenic 40.0%
! AGAATGAAGGTTAGCTCTTG+CGG + chr4_3:5218614-5218633 Msa0625900:intron 40.0%
ATGAATATGTAGAGCGATGG+AGG - chr4_3:5218829-5218848 None:intergenic 40.0%
AATAGCAGTACACGTGAACT+TGG + chr4_3:5218850-5218869 Msa0625900:CDS 40.0%
AACACCTGAGGAACAAAAGA+GGG + chr4_3:5219240-5219259 Msa0625900:intron 40.0%
AGCTACCGGAAAATTGATAG+AGG + chr4_3:5219263-5219282 Msa0625900:intron 40.0%
! GCACACCTCTATCAATTTTC+CGG - chr4_3:5219271-5219290 None:intergenic 40.0%
ATAATACAGCTGTAGGGACA+GGG - chr4_3:5219370-5219389 None:intergenic 40.0%
TATAATACAGCTGTAGGGAC+AGG - chr4_3:5219371-5219390 None:intergenic 40.0%
! GATCAAGTTGTGTGGTCAAT+TGG - chr4_3:5219413-5219432 None:intergenic 40.0%
TACTATTTACTGCGGTCACT+GGG - chr4_3:5219441-5219460 None:intergenic 40.0%
TTACTATTTACTGCGGTCAC+TGG - chr4_3:5219442-5219461 None:intergenic 40.0%
GTAAAACTTGATGTAGGCTC+TGG + chr4_3:5219458-5219477 Msa0625900:intron 40.0%
GTCTAAGTCCTTAACTACGT+CGG + chr4_3:5219735-5219754 Msa0625900:intron 40.0%
ATAAGTGTCCGACGTAGTTA+AGG - chr4_3:5219746-5219765 None:intergenic 40.0%
!! TGAATTCGCAGTGCTGATTT+AGG + chr4_3:5219786-5219805 Msa0625900:intron 40.0%
GGTATTGCAAATCTTTGGGT+GGG - chr4_3:5219824-5219843 None:intergenic 40.0%
GGACTATTCAATAGAGAAGG+GGG - chr4_3:5219906-5219925 None:intergenic 40.0%
GGGACTATTCAATAGAGAAG+GGG - chr4_3:5219907-5219926 None:intergenic 40.0%
!! ACATACTTCCCTTTTTGGCA+TGG + chr4_3:5220368-5220387 Msa0625900:intron 40.0%
!! CATACTTCCCTTTTTGGCAT+GGG + chr4_3:5220369-5220388 Msa0625900:intron 40.0%
TGGCATGGGAGTAATTAGTA+AGG + chr4_3:5220383-5220402 Msa0625900:intron 40.0%
GGCATGGGAGTAATTAGTAA+GGG + chr4_3:5220384-5220403 Msa0625900:intron 40.0%
CCACGTCAAATGAGAAATAG+AGG - chr4_3:5220432-5220451 None:intergenic 40.0%
! CCTCTATTTCTCATTTGACG+TGG + chr4_3:5220429-5220448 Msa0625900:intron 40.0%
CTGTATCACCTGAAAAAAGC+AGG + chr4_3:5220531-5220550 Msa0625900:intron 40.0%
!!! ATCTATGCCCTGCTTTTTTC+AGG - chr4_3:5220542-5220561 None:intergenic 40.0%
AGGCCAAAGAAGAATTGTTG+AGG + chr4_3:5220912-5220931 Msa0625900:intron 40.0%
GGCCAAAGAAGAATTGTTGA+GGG + chr4_3:5220913-5220932 Msa0625900:intron 40.0%
GACCCTCAACAATTCTTCTT+TGG - chr4_3:5220918-5220937 None:intergenic 40.0%
! TGCTTGTGTCCTTTTTGCTA+TGG + chr4_3:5221036-5221055 Msa0625900:intron 40.0%
GTGGGAAGAAGATTCTGATT+TGG + chr4_3:5221326-5221345 Msa0625900:CDS 40.0%
! CTGTGTTTTATCACACGCAA+TGG + chr4_3:5221398-5221417 Msa0625900:three_prime_UTR 40.0%
TGCTCATATGCAGAGAAAGA+AGG + chr4_3:5221429-5221448 Msa0625900:three_prime_UTR 40.0%
GCTTTGTCCTCGTATTTCTT+TGG - chr4_3:5221505-5221524 None:intergenic 40.0%
GCCTAGAGCCATGTATTTAT+AGG + chr4_3:5221874-5221893 Msa0625900:three_prime_UTR 40.0%
GCCTATAAATACATGGCTCT+AGG - chr4_3:5221878-5221897 None:intergenic 40.0%
!! GTGTGACAAACATTTTGGTG+TGG - chr4_3:5221904-5221923 None:intergenic 40.0%
!! TCATTGAGAGCACTGAAATC+AGG + chr4_3:5222062-5222081 Msa0625900:three_prime_UTR 40.0%
TCTATATTCAAGCTGCATGG+AGG - chr4_3:5222313-5222332 Msa0625910:CDS 40.0%
TTCGCAACAATGGAGAACAT+GGG - chr4_3:5222342-5222361 Msa0625910:CDS 40.0%
ATTCGCAACAATGGAGAACA+TGG - chr4_3:5222343-5222362 Msa0625910:CDS 40.0%
TCCGTTTCTATTCGCAACAA+TGG - chr4_3:5222352-5222371 Msa0625910:CDS 40.0%
TACCTCACTCATAGCTTTCA+CGG + chr4_3:5222457-5222476 Msa0625900:three_prime_UTR 40.0%
! TTCACGGTTCTTGTTGATGA+TGG + chr4_3:5222473-5222492 Msa0625900:three_prime_UTR 40.0%
TGGTGAAGAGTTGCTAACAT+GGG - chr4_3:5222528-5222547 Msa0625910:CDS 40.0%
!!! AACAGAGGAGTTTTGAAGGA+AGG - chr4_3:5222560-5222579 Msa0625910:CDS 40.0%
!! CTTCAACAGAGGAGTTTTGA+AGG - chr4_3:5222564-5222583 Msa0625910:CDS 40.0%
!! CTAGAGAGTGTTACTACAGA+TGG - chr4_3:5222602-5222621 Msa0625910:CDS 40.0%
GAGATGTTGTTCATCATTCG+TGG - chr4_3:5222629-5222648 Msa0625910:CDS 40.0%
AGGGGTCGATGAAGAAAATT+TGG - chr4_3:5222950-5222969 Msa0625910:CDS 40.0%
! AATTTTCTTCATCGACCCCT+CGG + chr4_3:5222950-5222969 Msa0625900:three_prime_UTR 40.0%
TGGAGGAAATGAGGATCAAA+AGG - chr4_3:5223068-5223087 Msa0625910:CDS 40.0%
! AACCGACATTGATTGAAGGT+AGG + chr4_3:5223092-5223111 Msa0625900:three_prime_UTR 40.0%
GACCTACCTTCAATCAATGT+CGG - chr4_3:5223097-5223116 Msa0625910:intron 40.0%
TCTTCTGATTGGAAACATGC+AGG - chr4_3:5223213-5223232 Msa0625910:CDS 40.0%
ATGGAAAACAAAACCTCTCC+AGG + chr4_3:5223266-5223285 Msa0625900:three_prime_UTR 40.0%
TGGAAAACAAAACCTCTCCA+GGG + chr4_3:5223267-5223286 Msa0625900:three_prime_UTR 40.0%
TTTCACAGTACACTTGGTCA+GGG - chr4_3:5223311-5223330 Msa0625910:intron 40.0%
! TTTTCACAGTACACTTGGTC+AGG - chr4_3:5223312-5223331 Msa0625910:intron 40.0%
TGAAGATCAGACACACGATA+TGG + chr4_3:5223517-5223536 Msa0625900:intron 40.0%
GAAGATCAGACACACGATAT+GGG + chr4_3:5223518-5223537 Msa0625900:intron 40.0%
ATATACCAGGGTATGACAGT+TGG - chr4_3:5223876-5223895 Msa0625910:CDS 40.0%
! GTGTTGTGTGGCACTGAAAT+TGG - chr4_3:5216006-5216025 None:intergenic 45.0%
AGATGACATAGCCATAGCCA+TGG - chr4_3:5216045-5216064 None:intergenic 45.0%
GGAAGAAAAGTGAGGTTGTG+AGG - chr4_3:5216071-5216090 None:intergenic 45.0%
TCTTCATCAGAGCCAAATCG+TGG + chr4_3:5216200-5216219 Msa0625900:CDS 45.0%
CGTGGTTTCGATCCTAAATC+AGG + chr4_3:5216218-5216237 Msa0625900:CDS 45.0%
CAAGAACGTTGCGTTTAGGA+CGG - chr4_3:5217359-5217378 None:intergenic 45.0%
AGAGCAAGAACGTTGCGTTT+AGG - chr4_3:5217363-5217382 None:intergenic 45.0%
GAAGAAATGTTGCTGGGCAA+GGG - chr4_3:5217588-5217607 None:intergenic 45.0%
TGAAGAAATGTTGCTGGGCA+AGG - chr4_3:5217589-5217608 None:intergenic 45.0%
! TCGCATGCCTTTGTTTACCA+TGG + chr4_3:5217789-5217808 Msa0625900:intron 45.0%
CTCCGAGATGTCACTAGATT+TGG + chr4_3:5218228-5218247 Msa0625900:intron 45.0%
! AGCTGCTTTGAACAACTGAG+AGG - chr4_3:5218298-5218317 None:intergenic 45.0%
TCAGTTGTTCAAAGCAGCTC+TGG + chr4_3:5218299-5218318 Msa0625900:CDS 45.0%
TCCTTAGATGATATCCCTGC+AGG + chr4_3:5218532-5218551 Msa0625900:CDS 45.0%
TCCTGCAGGGATATCATCTA+AGG - chr4_3:5218536-5218555 None:intergenic 45.0%
! GAATGAAGGTTAGCTCTTGC+GGG + chr4_3:5218615-5218634 Msa0625900:intron 45.0%
! TTCTTAGAAGTGCAGGTCGT+TGG + chr4_3:5218791-5218810 Msa0625900:intron 45.0%
ATGGTGCCTCTGCCATTAAA+AGG + chr4_3:5218894-5218913 Msa0625900:intron 45.0%
ACTCACTCTTAGCTCCTGAT+TGG + chr4_3:5219147-5219166 Msa0625900:intron 45.0%
CTCACTCTTAGCTCCTGATT+GGG + chr4_3:5219148-5219167 Msa0625900:intron 45.0%
TCACTCTTAGCTCCTGATTG+GGG + chr4_3:5219149-5219168 Msa0625900:intron 45.0%
!! TTAGCTTGTACACCCCAATC+AGG - chr4_3:5219164-5219183 None:intergenic 45.0%
GAACACCTGAGGAACAAAAG+AGG + chr4_3:5219239-5219258 Msa0625900:intron 45.0%
!! AGTGCTGATTTAGGCCTTCT+AGG + chr4_3:5219795-5219814 Msa0625900:intron 45.0%
CGGTATTGCAAATCTTTGGG+TGG - chr4_3:5219825-5219844 None:intergenic 45.0%
CTGATCCGAATGTAGAACAC+TGG - chr4_3:5219867-5219886 None:intergenic 45.0%
ATATAGCTGTACCAGGGTAC+TGG - chr4_3:5220063-5220082 None:intergenic 45.0%
! AGCTATCTGGTGTTAACTGC+TGG - chr4_3:5220638-5220657 None:intergenic 45.0%
TCATAAATCGTTCAGGTCCC+TGG + chr4_3:5220733-5220752 Msa0625900:intron 45.0%
GTGATGCTTAAGCAAACCGA+TGG + chr4_3:5220759-5220778 Msa0625900:CDS 45.0%
GAAGAATTGTTGAGGGTCCT+TGG + chr4_3:5220920-5220939 Msa0625900:CDS 45.0%
CTTGGACTTCAAGAAGAGGA+GGG + chr4_3:5220938-5220957 Msa0625900:CDS 45.0%
TGATATTGCAGTCAAGCACG+TGG + chr4_3:5221304-5221323 Msa0625900:intron 45.0%
!! TGGAAGTATCATCTGCATGG+CGG + chr4_3:5221346-5221365 Msa0625900:CDS 45.0%
CCTCTAGCAATGTTCTACTC+AGG - chr4_3:5221373-5221392 None:intergenic 45.0%
CCTGAGTAGAACATTGCTAG+AGG + chr4_3:5221370-5221389 Msa0625900:exon 45.0%
GAGTAGAACATTGCTAGAGG+AGG + chr4_3:5221373-5221392 Msa0625900:exon 45.0%
GTATTTGTCAGCTGCAGTGT+TGG - chr4_3:5221935-5221954 None:intergenic 45.0%
! AGCACTGAAATCAGGTTCTG+AGG + chr4_3:5222070-5222089 Msa0625900:three_prime_UTR 45.0%
! GCACTGAAATCAGGTTCTGA+GGG + chr4_3:5222071-5222090 Msa0625900:three_prime_UTR 45.0%
!! AAATCAGGTTCTGAGGGCTT+TGG + chr4_3:5222077-5222096 Msa0625900:three_prime_UTR 45.0%
!! AATCAGGTTCTGAGGGCTTT+GGG + chr4_3:5222078-5222097 Msa0625900:three_prime_UTR 45.0%
TTCACCAGCTCTCTTGAACT+TGG + chr4_3:5222104-5222123 Msa0625900:three_prime_UTR 45.0%
AGTACCAAGTTCAAGAGAGC+TGG - chr4_3:5222111-5222130 Msa0625910:CDS 45.0%
! TTTGACGAACTTTGAGGACC+CGG + chr4_3:5222197-5222216 Msa0625900:three_prime_UTR 45.0%
GGGAAGTGATGATTCTGCAA+GGG - chr4_3:5222231-5222250 Msa0625910:CDS 45.0%
CTTGCAGAATCATCACTTCC+CGG + chr4_3:5222230-5222249 Msa0625900:three_prime_UTR 45.0%
TTGCAGAATCATCACTTCCC+GGG + chr4_3:5222231-5222250 Msa0625900:three_prime_UTR 45.0%
!! CTGCATGGAGGAAGCATTTA+AGG - chr4_3:5222301-5222320 Msa0625910:CDS 45.0%
!! GGCATTTGCTTTAGAAGCAG+AGG - chr4_3:5222435-5222454 Msa0625910:CDS 45.0%
GAAAGCTATGAGTGAGGTAG+AGG - chr4_3:5222456-5222475 Msa0625910:CDS 45.0%
AACCGTGAAAGCTATGAGTG+AGG - chr4_3:5222462-5222481 Msa0625910:CDS 45.0%
AGAGTTGCTAACATGGGCAT+TGG - chr4_3:5222522-5222541 Msa0625910:CDS 45.0%
GTGGTGAAGAGTTGCTAACA+TGG - chr4_3:5222529-5222548 Msa0625910:CDS 45.0%
AGAAGTGGCTTCTTCAACAG+AGG - chr4_3:5222575-5222594 Msa0625910:CDS 45.0%
!! ACTACAGATGGTGGAAGAAG+TGG - chr4_3:5222590-5222609 Msa0625910:CDS 45.0%
!! GAGAGTGTTACTACAGATGG+TGG - chr4_3:5222599-5222618 Msa0625910:CDS 45.0%
TCGTCCATGTTAGCAAAGAG+AGG + chr4_3:5222737-5222756 Msa0625900:three_prime_UTR 45.0%
GGTTCCTCTCTTTGCTAACA+TGG - chr4_3:5222744-5222763 Msa0625910:intron 45.0%
! ATTTTCTTCATCGACCCCTC+GGG + chr4_3:5222951-5222970 Msa0625900:three_prime_UTR 45.0%
GGGTGTTCAACCACTTGTAT+TGG + chr4_3:5222971-5222990 Msa0625900:three_prime_UTR 45.0%
!! TCAATCAATGTCGGTTCGTC+TGG - chr4_3:5223088-5223107 Msa0625910:CDS 45.0%
! GACGAACCGACATTGATTGA+AGG + chr4_3:5223088-5223107 Msa0625900:three_prime_UTR 45.0%
GTGCTCTTTGCTCTTCTGAT+TGG - chr4_3:5223224-5223243 Msa0625910:CDS 45.0%
AAACAAAACCTCTCCAGGGT+AGG + chr4_3:5223271-5223290 Msa0625900:three_prime_UTR 45.0%
TTCACAGTACACTTGGTCAG+GGG - chr4_3:5223310-5223329 Msa0625910:intron 45.0%
GGTGGGGACTTCAGAATTTA+AGG - chr4_3:5223708-5223727 Msa0625910:CDS 45.0%
TTTCTCCAACTGTCATACCC+TGG + chr4_3:5223868-5223887 Msa0625900:three_prime_UTR 45.0%
TGTTGCGGTTGTTGAGTGTG+AGG + chr4_3:5216805-5216824 Msa0625900:intron 50.0%
! TGCTTGCGGCTTTTATGTGC+TGG + chr4_3:5217518-5217537 Msa0625900:intron 50.0%
! GCTTGCGGCTTTTATGTGCT+GGG + chr4_3:5217519-5217538 Msa0625900:intron 50.0%
GTTCCTGGGGTTATGTATGC+AGG + chr4_3:5217562-5217581 Msa0625900:intron 50.0%
! TGAGAGGCTCGAAGCTTTTC+TGG - chr4_3:5218282-5218301 None:intergenic 50.0%
! GGTTAGCTCTTGCGGGAAAA+TGG + chr4_3:5218622-5218641 Msa0625900:intron 50.0%
! AGCTCCCTCTTTTGTTCCTC+AGG - chr4_3:5219247-5219266 None:intergenic 50.0%
GGAACAAAAGAGGGAGCTAC+CGG + chr4_3:5219249-5219268 Msa0625900:intron 50.0%
! GGGATAGGGATCAAGTTGTG+TGG - chr4_3:5219421-5219440 None:intergenic 50.0%
TTACTGCGGTCACTGGGATA+GGG - chr4_3:5219435-5219454 None:intergenic 50.0%
TTTACTGCGGTCACTGGGAT+AGG - chr4_3:5219436-5219455 None:intergenic 50.0%
TGCTTAAGCATCACCTGCCA+GGG - chr4_3:5220753-5220772 None:intergenic 50.0%
TTGCTTAAGCATCACCTGCC+AGG - chr4_3:5220754-5220773 None:intergenic 50.0%
GGTCCTTGGACTTCAAGAAG+AGG + chr4_3:5220934-5220953 Msa0625900:CDS 50.0%
CCTCCTCTTCTTGAAGTCCA+AGG - chr4_3:5220940-5220959 None:intergenic 50.0%
CCTTGGACTTCAAGAAGAGG+AGG + chr4_3:5220937-5220956 Msa0625900:CDS 50.0%
AAGATGCAGTGCAGAACCAC+AGG - chr4_3:5221115-5221134 None:intergenic 50.0%
TATTGCAGTCAAGCACGTGG+TGG + chr4_3:5221307-5221326 Msa0625900:intron 50.0%
ATTGCAGTCAAGCACGTGGT+GGG + chr4_3:5221308-5221327 Msa0625900:intron 50.0%
ATGCTGAAGGACAATCGCAG+CGG + chr4_3:5221982-5222001 Msa0625900:three_prime_UTR 50.0%
!! CGGTTTGCTGCTAATCTTCG+TGG - chr4_3:5222146-5222165 Msa0625910:CDS 50.0%
! TGATGATTCTGCAAGGGCGT+TGG - chr4_3:5222225-5222244 Msa0625910:CDS 50.0%
CGGGAAGTGATGATTCTGCA+AGG - chr4_3:5222232-5222251 Msa0625910:CDS 50.0%
! TTTAAGGCGAAGGCGAAGGA+AGG - chr4_3:5222285-5222304 Msa0625910:CDS 50.0%
! AGCATTTAAGGCGAAGGCGA+AGG - chr4_3:5222289-5222308 Msa0625910:CDS 50.0%
!! GGAGGAAGCATTTAAGGCGA+AGG - chr4_3:5222295-5222314 Msa0625910:CDS 50.0%
!!! GGCAAGCTTGCTGCAGATTT+TGG + chr4_3:5222494-5222513 Msa0625900:three_prime_UTR 50.0%
ACAAGTGGTTGAACACCCGA+GGG - chr4_3:5222969-5222988 Msa0625910:CDS 50.0%
TACAAGTGGTTGAACACCCG+AGG - chr4_3:5222970-5222989 Msa0625910:CDS 50.0%
GACGCTACGACCAATACAAG+TGG - chr4_3:5222984-5223003 Msa0625910:CDS 50.0%
AGCGTCTGACTCTTTCCCTT+AGG + chr4_3:5222998-5223017 Msa0625900:three_prime_UTR 50.0%
CTGACTCTTTCCCTTAGGTC+CGG + chr4_3:5223003-5223022 Msa0625900:three_prime_UTR 50.0%
!! ATCAATGTCGGTTCGTCTGG+AGG - chr4_3:5223085-5223104 Msa0625910:CDS 50.0%
CTTCTGACTAGTACCTACCC+TGG - chr4_3:5223287-5223306 Msa0625910:CDS 50.0%
! CGTTGCGTTTAGGACGGAGA+GGG - chr4_3:5217353-5217372 None:intergenic 55.0%
! ACGTTGCGTTTAGGACGGAG+AGG - chr4_3:5217354-5217373 None:intergenic 55.0%
TGATATCCCTGCAGGACCTG+TGG + chr4_3:5218540-5218559 Msa0625900:CDS 55.0%
ATGAAGCCACAGGTCCTGCA+GGG - chr4_3:5218549-5218568 None:intergenic 55.0%
AATGAAGCCACAGGTCCTGC+AGG - chr4_3:5218550-5218569 None:intergenic 55.0%
CTTTGGGTGGGAAGCCTAGA+AGG - chr4_3:5219812-5219831 None:intergenic 55.0%
AAATCGTTCAGGTCCCTGGC+AGG + chr4_3:5220737-5220756 Msa0625900:intron 55.0%
AGTGCAACTCGCTTCACCCT+TGG + chr4_3:5220804-5220823 Msa0625900:CDS 55.0%
!! TTCTGCAAGGGCGTTGGTTC+CGG - chr4_3:5222219-5222238 Msa0625910:CDS 55.0%
CAAGTGGTTGAACACCCGAG+GGG - chr4_3:5222968-5222987 Msa0625910:CDS 55.0%
ACTCTTTCCCTTAGGTCCGG+AGG + chr4_3:5223006-5223025 Msa0625900:three_prime_UTR 55.0%
CTTGCTTCCTCCGGACCTAA+GGG - chr4_3:5223016-5223035 Msa0625910:CDS 55.0%
GCATCATCGCTTGCTTCCTC+CGG - chr4_3:5223025-5223044 Msa0625910:CDS 55.0%
GCGATGATGCATCCACTGCT+CGG + chr4_3:5223035-5223054 Msa0625900:three_prime_UTR 55.0%
CGGTTCGTCTGGAGGAAATG+AGG - chr4_3:5223077-5223096 Msa0625910:CDS 55.0%
GACTAGTACCTACCCTGGAG+AGG - chr4_3:5223282-5223301 Msa0625910:CDS 55.0%
TGGGCACATGCACCTCTACA+TGG + chr4_3:5223537-5223556 Msa0625900:intron 55.0%
GGGCCTGCATACATAACCCC+AGG - chr4_3:5217568-5217587 None:intergenic 60.0%
GCTGTGTTTCGCCAGTACCC+TGG + chr4_3:5220049-5220068 Msa0625900:CDS 60.0%
!! TCTGCAAGGGCGTTGGTTCC+GGG - chr4_3:5222218-5222237 Msa0625910:CDS 60.0%
AAGGCGAAGGCGAAGGAAGG+AGG - chr4_3:5222282-5222301 Msa0625910:CDS 60.0%
GCTTGCTTCCTCCGGACCTA+AGG - chr4_3:5223017-5223036 Msa0625910:CDS 60.0%
! AAAGGCGTGACTCCGAGCAG+TGG - chr4_3:5223050-5223069 Msa0625910:CDS 60.0%
GACAATCGCAGCGGCAGCAG+TGG + chr4_3:5221991-5222010 Msa0625900:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 5215977 5223951 5215977 ID=Msa0625900;Name=Msa0625900
chr4_3 mRNA 5215977 5223951 5215977 ID=Msa0625900-mRNA-1;Parent=Msa0625900;Name=Msa0625900-mRNA-1;_AED=0.18;_eAED=0.18;_QI=55|1|1|1|0.78|0.73|15|1983|382
chr4_3 exon 5215977 5216348 5215977 ID=Msa0625900-mRNA-1:exon:1433;Parent=Msa0625900-mRNA-1
chr4_3 exon 5217584 5217614 5217584 ID=Msa0625900-mRNA-1:exon:1434;Parent=Msa0625900-mRNA-1
chr4_3 exon 5218055 5218147 5218055 ID=Msa0625900-mRNA-1:exon:1435;Parent=Msa0625900-mRNA-1
chr4_3 exon 5218264 5218326 5218264 ID=Msa0625900-mRNA-1:exon:1436;Parent=Msa0625900-mRNA-1
chr4_3 exon 5218511 5218622 5218511 ID=Msa0625900-mRNA-1:exon:1437;Parent=Msa0625900-mRNA-1
chr4_3 exon 5218806 5218891 5218806 ID=Msa0625900-mRNA-1:exon:1438;Parent=Msa0625900-mRNA-1
chr4_3 exon 5219633 5219691 5219633 ID=Msa0625900-mRNA-1:exon:1439;Parent=Msa0625900-mRNA-1
chr4_3 exon 5219797 5219899 5219797 ID=Msa0625900-mRNA-1:exon:1440;Parent=Msa0625900-mRNA-1
chr4_3 exon 5220010 5220070 5220010 ID=Msa0625900-mRNA-1:exon:1441;Parent=Msa0625900-mRNA-1
chr4_3 exon 5220748 5220830 5220748 ID=Msa0625900-mRNA-1:exon:1442;Parent=Msa0625900-mRNA-1
chr4_3 exon 5220914 5220994 5220914 ID=Msa0625900-mRNA-1:exon:1443;Parent=Msa0625900-mRNA-1
chr4_3 exon 5221315 5222762 5221315 ID=Msa0625900-mRNA-1:exon:1444;Parent=Msa0625900-mRNA-1
chr4_3 exon 5222879 5223117 5222879 ID=Msa0625900-mRNA-1:exon:1445;Parent=Msa0625900-mRNA-1
chr4_3 exon 5223213 5223324 5223213 ID=Msa0625900-mRNA-1:exon:1446;Parent=Msa0625900-mRNA-1
chr4_3 exon 5223708 5223951 5223708 ID=Msa0625900-mRNA-1:exon:1447;Parent=Msa0625900-mRNA-1
chr4_3 five_prime_UTR 5215977 5216031 5215977 ID=Msa0625900-mRNA-1:five_prime_utr;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5216032 5216348 5216032 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5217584 5217614 5217584 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5218055 5218147 5218055 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5218264 5218326 5218264 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5218511 5218622 5218511 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5218806 5218891 5218806 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5219633 5219691 5219633 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5219797 5219899 5219797 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5220010 5220070 5220010 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5220748 5220830 5220748 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5220914 5220994 5220914 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 CDS 5221315 5221374 5221315 ID=Msa0625900-mRNA-1:cds;Parent=Msa0625900-mRNA-1
chr4_3 three_prime_UTR 5221375 5222762 5221375 ID=Msa0625900-mRNA-1:three_prime_utr;Parent=Msa0625900-mRNA-1
chr4_3 three_prime_UTR 5222879 5223117 5222879 ID=Msa0625900-mRNA-1:three_prime_utr;Parent=Msa0625900-mRNA-1
chr4_3 three_prime_UTR 5223213 5223324 5223213 ID=Msa0625900-mRNA-1:three_prime_utr;Parent=Msa0625900-mRNA-1
chr4_3 three_prime_UTR 5223708 5223951 5223708 ID=Msa0625900-mRNA-1:three_prime_utr;Parent=Msa0625900-mRNA-1
Gene Sequence

>Msa0625900

ATGCTACTATCCATGGCTATGGCTATGTCATCTCTACCTCACAACCTCACTTTTCTTCCTTCACATCTTTCTCCACTATCTTCTTCACCTTCTTCAATTTCTACTACTAAATCTCTTCGAAACACTTCTTTATTCAAAATCAAATGCATTAAAACCGAAAAAGAAGCTTCTTCATCAGAGCCAAATCGTGGTTTCGATCCTAAATCAGGTGTATCTGTTTACAAACCTAAGTCTTATGAAGTTCTCGCTACTGATGCTGCTAATTCACTCAATTTTGCTCTTCAAGATGGAAAACTGAGACTCGAAATCGATTTCCCGCCCTTGCCCAGCAACATTTCTTCATATAAGGGATCTTCAGATGATTTCATCGATGCCAACATTCAACTTGTCTTGGCTGTTGTAAAAAAGCTACAGGAGAAAAAAGAGACCAGAGCTTGCATAGTATTCCCTGATAAACCAGAAAAGCTTCGAGCCTCTCAGTTGTTCAAAGCAGCTCTGGATTCAGTTGATGGCCTTACTATAGGCTCCTTAGATGATATCCCTGCAGGACCTGTGGCTTCATTTTTCAGATCTGTTAGAAACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGGTCGTTGGCAGTCAAGTGAACCTCCATCGCTCTACATATTCATTAATAGCAGTACACGTGAACTTGGTTATATTGAGAAGTATGTGGAAAAATTTGCTCCATCAACCCCAACACTTTTATTTAATCTTGAGCTAGATACACTACGTGCTGATTTAGGCCTTCTAGGCTTCCCACCCAAAGATTTGCAATACCGCTTTCTTTCTCAATTTACTCCAGTGTTCTACATTCGGATCAGAGATTATTCAAAGACAGTTGCAGTAGCACCTTATATTGTCAATTACAGTGGAGCTGTGTTTCGCCAGTACCCTGGTCCCTGGCAGGTGATGCTTAAGCAAACCGATGGTTCTTATGCTTGTGTAGCAGAAAGTGCAACTCGCTTCACCCTTGGTGAAGCCAAAGAAGAATTGTTGAGGGTCCTTGGACTTCAAGAAGAGGAGGGAAGCTCTCTAGAATTTCTACGAAGAGGCTATAGGTCAAGCACGTGGTGGGAAGAAGATTCTGATTTGGAAGTATCATCTGCATGGCGGACCTGA

Protein sequence

>Msa0625900

MLLSMAMAMSSLPHNLTFLPSHLSPLSSSPSSISTTKSLRNTSLFKIKCIKTEKEASSSEPNRGFDPKSGVSVYKPKSYEVLATDAANSLNFALQDGKLRLEIDFPPLPSNISSYKGSSDDFIDANIQLVLAVVKKLQEKKETRACIVFPDKPEKLRASQLFKAALDSVDGLTIGSLDDIPAGPVASFFRSVRNTLDFDFEDENEGRWQSSEPPSLYIFINSSTRELGYIEKYVEKFAPSTPTLLFNLELDTLRADLGLLGFPPKDLQYRFLSQFTPVFYIRIRDYSKTVAVAPYIVNYSGAVFRQYPGPWQVMLKQTDGSYACVAESATRFTLGEAKEELLRVLGLQEEEGSSLEFLRRGYRSSTWWEEDSDLEVSSAWRT*