AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0585720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0585720 MtrunA17_Chr4g0001471 96.859 382 9 1 1 382 1 379 0.0 754
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0585720 AT1G73060.1 72.487 378 82 3 5 381 1 357 0.0 532

Find 209 sgRNAs with CRISPR-Local

Find 472 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATAGTAATAGCTATTA+TGG 0.126403 4_2:+6794831 Msa0585710:CDS
GGCAAGCTTGCTGCAGATTT+TGG 0.164117 4_2:-6795586 Msa0585720:three_prime_UTR
GGTGGGGACTTCAGAATTTA+AGG 0.170474 4_2:+6794375 Msa0585710:CDS
CCTCAAAGTTCGTCAAAATT+TGG 0.172842 4_2:+6795889 Msa0585710:CDS
CCATAGACAGTAACAAAATT+TGG 0.208171 4_2:-6794354 Msa0585720:three_prime_UTR
TCATTATAATCATACATATT+TGG 0.213712 4_2:+6796459 None:intergenic
TAAACAGATACACCTGATTT+AGG 0.217240 4_2:+6801853 None:intergenic
TTCTGCAAGGGCGTTGGTTC+CGG 0.218060 4_2:+6795864 Msa0585710:CDS
CTGCATGGAGGAAGCATTTA+AGG 0.231374 4_2:+6795782 Msa0585710:CDS
ATATCTCTTCTAAGATCTTT+TGG 0.250851 4_2:-6795167 Msa0585720:three_prime_UTR
CAGCAACATTTCTTCATATA+AGG 0.266428 4_2:-6800488 Msa0585720:intron
GACCCTCAACAATTCTTCTT+TGG 0.270857 4_2:+6797166 None:intergenic
ATACAGTGTGACAAACATTT+TGG 0.276062 4_2:+6796174 None:intergenic
TGAATTCGCAGTGCTGATTT+AGG 0.279676 4_2:-6798295 Msa0585720:intron
AGTGCTGATTTAGGCCTTCT+AGG 0.283454 4_2:-6798286 Msa0585720:CDS
AAAGCGGTATTGCAAATCTT+TGG 0.283496 4_2:+6798255 None:intergenic
CAGAGAAGACTTACATAGTT+AGG 0.283571 4_2:+6795413 Msa0585710:CDS
AATAAAAGTGTTGGGGTTGA+TGG 0.284314 4_2:+6798436 None:intergenic
AGGGGTCGATGAAGAAAATT+TGG 0.285665 4_2:+6795133 Msa0585710:CDS
CCCCATAATAGCTATTACTA+TGG 0.288425 4_2:-6794833 Msa0585720:three_prime_UTR
TCTGCAAGGGCGTTGGTTCC+GGG 0.297464 4_2:+6795865 Msa0585710:CDS
CCACTGTAATTGACAATATA+AGG 0.298504 4_2:+6798056 None:intergenic
AAATTTGGGGAAAACTTCTA+TGG 0.302110 4_2:-6794339 Msa0585720:three_prime_UTR
GCTTTGTCCTCGTATTTCTT+TGG 0.302301 4_2:+6796579 None:intergenic
GCCTAGAGCCATGTATTTAT+AGG 0.310323 4_2:-6796206 Msa0585720:three_prime_UTR
CATAGACAGTAACAAAATTT+GGG 0.315147 4_2:-6794353 Msa0585720:three_prime_UTR
GTGTTGTGTGGCACTGAAAT+TGG 0.317840 4_2:+6802080 None:intergenic
GTGCTCTTTGCTCTTCTGAT+TGG 0.318517 4_2:+6794859 Msa0585710:CDS
AAATTGGCTCAGCACAAATA+TGG 0.323793 4_2:+6802096 None:intergenic
TCCATAGTAATAGCTATTAT+GGG 0.333113 4_2:+6794832 Msa0585710:CDS
AATCAGGTTCTGAGGGCTTT+GGG 0.347993 4_2:-6796002 Msa0585720:three_prime_UTR
AAATCAGGTTCTGAGGGCTT+TGG 0.350213 4_2:-6796003 Msa0585720:three_prime_UTR
CAAGATTAAATAAAAGTGTT+GGG 0.358312 4_2:+6798428 None:intergenic
AATTTCTACGAAGAGGCTAT+AGG 0.362385 4_2:-6797109 Msa0585720:CDS
TCAATCAATGTCGGTTCGTC+TGG 0.370374 4_2:+6794995 Msa0585710:CDS
CTTTGGGTGGGAAGCCTAGA+AGG 0.376335 4_2:+6798272 None:intergenic
ATACAACAGTCTATGCTTCT+CGG 0.384722 4_2:+6795917 Msa0585710:CDS
TCATTGAGAGCACTGAAATC+AGG 0.395867 4_2:-6796018 Msa0585720:three_prime_UTR
ATGAACAACATCTCATCAAC+TGG 0.395916 4_2:-6795445 Msa0585720:three_prime_UTR
AAGCGGTATTGCAAATCTTT+GGG 0.399943 4_2:+6798256 None:intergenic
GTGGGAAGAAGATTCTGATT+TGG 0.401550 4_2:-6796755 Msa0585720:CDS
TTAGGATCGAAACCACGATT+TGG 0.404526 4_2:+6801871 None:intergenic
TGAAGAAGTTCTTGCTTATG+AGG 0.407718 4_2:+6796048 None:intergenic
GAAGAATTGTTGAGGGTCCT+TGG 0.409519 4_2:-6797161 Msa0585720:CDS
ATTTCTACGAAGAGGCTATA+GGG 0.409617 4_2:-6797108 Msa0585720:intron
AAGGTTGATGGCCTTACTAT+AGG 0.409941 4_2:-6799573 Msa0585720:CDS
CTTGCAGAATCATCACTTCC+CGG 0.414286 4_2:-6795850 Msa0585720:three_prime_UTR
CGGTTTGCTGCTAATCTTCG+TGG 0.417955 4_2:+6795937 Msa0585710:CDS
TTCACGGTTCTTGTTGATGA+TGG 0.422131 4_2:-6795607 Msa0585720:three_prime_UTR
TACCTCACTCATAGCTTTCA+CGG 0.425446 4_2:-6795623 Msa0585720:three_prime_UTR
TTACTCCAGTGTTCTACATT+CGG 0.425820 4_2:-6798222 Msa0585720:CDS
TCCTGCAGGGATATCATCTA+AGG 0.428313 4_2:+6799548 None:intergenic
CTTATATGAAGAAATGTTGC+TGG 0.430887 4_2:+6800489 None:intergenic
CGTGGTTTCGATCCTAAATC+AGG 0.444850 4_2:-6801865 Msa0585720:CDS
TCCATTGTTGCGAATAGAAA+CGG 0.447494 4_2:-6795732 Msa0585720:three_prime_UTR
TGCCAACATTCAACTTGTCT+TGG 0.448124 4_2:-6800003 Msa0585720:CDS
TCATAAATCGTTCAGGTCCC+TGG 0.448130 4_2:-6797348 Msa0585720:intron
TTGCTTAAGCATCACCTGCC+AGG 0.449595 4_2:+6797330 None:intergenic
GCGAGAACTTCATAAGACTT+AGG 0.454079 4_2:+6801826 None:intergenic
GGGTGTTCAACCACTTGTAT+TGG 0.454525 4_2:-6795109 Msa0585720:three_prime_UTR
ATGGAAAACAAAACCTCTCC+AGG 0.456409 4_2:-6794814 Msa0585720:three_prime_UTR
TCAGTTGTTCAAAGCAGCTC+TGG 0.458399 4_2:-6799782 Msa0585720:CDS
CCATGTAGATGTGTTAAACT+TGG 0.461273 4_2:-6796281 Msa0585720:three_prime_UTR
GCATCATCGCTTGCTTCCTC+CGG 0.465125 4_2:+6795058 Msa0585710:CDS
GCTTGCTTCCTCCGGACCTA+AGG 0.465489 4_2:+6795066 Msa0585710:CDS
CATCTTCAAAGTCAAAATCA+AGG 0.471831 4_2:+6799490 None:intergenic
AATGAAGCCACAGGTCCTGC+AGG 0.472666 4_2:+6799534 None:intergenic
TCAAGATTAAATAAAAGTGT+TGG 0.473701 4_2:+6798427 None:intergenic
TACATTAATTAAACTGTGCA+TGG 0.475186 4_2:+6796393 None:intergenic
TTAGTAGTAGAAATTGAAGA+AGG 0.484021 4_2:+6801964 None:intergenic
TTCACCAGCTCTCTTGAACT+TGG 0.484399 4_2:-6795976 Msa0585720:three_prime_UTR
CTGACTCTTTCCCTTAGGTC+CGG 0.486118 4_2:-6795077 Msa0585720:three_prime_UTR
GACTTTGAAGATGAGAATGA+AGG 0.486387 4_2:-6799480 Msa0585720:intron
AGCGTCTGACTCTTTCCCTT+AGG 0.488363 4_2:-6795082 Msa0585720:three_prime_UTR
AATAGCAGTACACGTGAACT+TGG 0.489119 4_2:-6799231 Msa0585720:CDS
ATATAGCTGTACCAGGGTAC+TGG 0.490688 4_2:+6798021 None:intergenic
CCTCCTCTTCTTGAAGTCCA+AGG 0.491038 4_2:+6797144 None:intergenic
TGAAGAAATGTTGCTGGGCA+AGG 0.493271 4_2:+6800495 None:intergenic
AGAGAAGACTTACATAGTTA+GGG 0.493349 4_2:+6795414 Msa0585710:CDS
GAAAGCATGTAAAGAAGTTG+AGG 0.502958 4_2:+6794142 Msa0585710:CDS
TTCTTAGAAGTGCAGGTCGT+TGG 0.503758 4_2:-6799290 Msa0585720:intron
GGTTCCTCTCTTTGCTAACA+TGG 0.504157 4_2:+6795339 Msa0585710:intron
GAAGAAGGTGAAGAAGATAG+TGG 0.505084 4_2:+6801979 None:intergenic
GGCATTTGCTTTAGAAGCAG+AGG 0.505619 4_2:+6795648 Msa0585710:CDS
AATTCACATTTCTTGTATTG+TGG 0.506801 4_2:+6794170 Msa0585710:CDS
GACAATCGCAGCGGCAGCAG+TGG 0.513635 4_2:-6796089 Msa0585720:three_prime_UTR
AGTGCAACTCGCTTCACCCT+TGG 0.516086 4_2:-6797277 Msa0585720:CDS
TTTGTTTGAATTTAGTCAGA+AGG 0.518058 4_2:+6795201 Msa0585710:CDS
TCCTTAGATGATATCCCTGC+AGG 0.518676 4_2:-6799549 Msa0585720:CDS
ATTCGCAACAATGGAGAACA+TGG 0.522904 4_2:+6795740 Msa0585710:CDS
GACGAACCGACATTGATTGA+AGG 0.524267 4_2:-6794992 Msa0585720:three_prime_UTR
TGGAGGAAATGAGGATCAAA+AGG 0.526808 4_2:+6795015 Msa0585710:CDS
TCCGTTTCTATTCGCAACAA+TGG 0.528384 4_2:+6795731 Msa0585710:CDS
GTATTTGTCAGCTGCAGTGT+TGG 0.529453 4_2:+6796148 None:intergenic
GGAAGAAAAGTGAGGTTGTG+AGG 0.531314 4_2:+6802015 None:intergenic
GATAGTGGAGAAAGATGTGA+AGG 0.532078 4_2:+6801994 None:intergenic
AGAGTTGCTAACATGGGCAT+TGG 0.533440 4_2:+6795561 Msa0585710:CDS
TGATGATTCTGCAAGGGCGT+TGG 0.534637 4_2:+6795858 Msa0585710:CDS
TTTCACAGTACACTTGGTCA+GGG 0.537219 4_2:+6794772 Msa0585710:intron
GAAAGCTATGAGTGAGGTAG+AGG 0.537681 4_2:+6795627 Msa0585710:CDS
GAGATGTTGTTCATCATTCG+TGG 0.539150 4_2:+6795454 Msa0585710:CDS
CTAGAGAGTGTTACTACAGA+TGG 0.541421 4_2:+6795481 Msa0585710:CDS
AGTTCAAGTAAGCATATACC+AGG 0.542819 4_2:+6794194 Msa0585710:CDS
GTCTTCTCTGTATATAAACT+CGG 0.543647 4_2:-6795400 Msa0585720:three_prime_UTR
TAGACACATACATAGTAGAC+AGG 0.544177 4_2:+6795696 Msa0585710:CDS
ACATTAATTAAACTGTGCAT+GGG 0.546350 4_2:+6796394 None:intergenic
ATCAATGTCGGTTCGTCTGG+AGG 0.548219 4_2:+6794998 Msa0585710:CDS
TAGGCTTGTTGAATTTCGAT+AGG 0.548727 4_2:+6796224 None:intergenic
CATCTAAGGAGCCTATAGTA+AGG 0.549669 4_2:+6799562 None:intergenic
CGGTATTGCAAATCTTTGGG+TGG 0.549941 4_2:+6798259 None:intergenic
CAACACAATGCTACTATCCA+TGG 0.551674 4_2:-6802058 Msa0585720:exon
TTGTTTGAATTTAGTCAGAA+GGG 0.551796 4_2:+6795202 Msa0585710:CDS
GCACTGAAATCAGGTTCTGA+GGG 0.551873 4_2:-6796009 Msa0585720:three_prime_UTR
AGAAGTGGCTTCTTCAACAG+AGG 0.551875 4_2:+6795508 Msa0585710:CDS
CTTGCTTCCTCCGGACCTAA+GGG 0.552988 4_2:+6795067 Msa0585710:CDS
AGCACTGAAATCAGGTTCTG+AGG 0.553944 4_2:-6796010 Msa0585720:three_prime_UTR
AAATCGTTCAGGTCCCTGGC+AGG 0.556462 4_2:-6797344 Msa0585720:intron
TTTGACGAACTTTGAGGACC+CGG 0.557037 4_2:-6795883 Msa0585720:three_prime_UTR
AAAGCATGTAAAGAAGTTGA+GGG 0.558423 4_2:+6794143 Msa0585710:CDS
TTGCAGAATCATCACTTCCC+GGG 0.558557 4_2:-6795849 Msa0585720:three_prime_UTR
TGCTTAAGCATCACCTGCCA+GGG 0.558854 4_2:+6797331 None:intergenic
GCCTATAAATACATGGCTCT+AGG 0.559293 4_2:+6796205 None:intergenic
TACAAATAGTGTCATGCTGA+AGG 0.559604 4_2:-6796111 Msa0585720:three_prime_UTR
GAAGAAATGTTGCTGGGCAA+GGG 0.561828 4_2:+6800496 None:intergenic
CGGTTCGTCTGGAGGAAATG+AGG 0.562037 4_2:+6795006 Msa0585710:CDS
GGCCAAAGAAGAATTGTTGA+GGG 0.563652 4_2:-6797168 Msa0585720:CDS
TGGTTATATTGAGAAGTATG+TGG 0.564545 4_2:-6799211 Msa0585720:intron
AGTACCAAGTTCAAGAGAGC+TGG 0.565279 4_2:+6795972 Msa0585710:CDS
TCTTCTGATTGGAAACATGC+AGG 0.565687 4_2:+6794870 Msa0585710:CDS
ACTACAGATGGTGGAAGAAG+TGG 0.567107 4_2:+6795493 Msa0585710:CDS
AGCCAAGACAAGTTGAATGT+TGG 0.570943 4_2:+6800001 None:intergenic
TTATATGAAGAAATGTTGCT+GGG 0.572669 4_2:+6800490 None:intergenic
AAGATTAAATAAAAGTGTTG+GGG 0.574401 4_2:+6798429 None:intergenic
TTCACAGTACACTTGGTCAG+GGG 0.577586 4_2:+6794773 Msa0585710:intron
CCAAGTTTAACACATCTACA+TGG 0.577774 4_2:+6796281 None:intergenic
TGCTCATATGCAGAGAAAGA+AGG 0.579598 4_2:-6796652 Msa0585720:three_prime_UTR
TTTAAGGCGAAGGCGAAGGA+AGG 0.579780 4_2:+6795798 Msa0585710:CDS
GCTGTGTTTCGCCAGTACCC+TGG 0.579836 4_2:-6798032 Msa0585720:intron
CCATAGTAATAGCTATTATG+GGG 0.581237 4_2:+6794833 Msa0585710:CDS
TTAATGAATATGTAGAGCGA+TGG 0.581715 4_2:+6799252 None:intergenic
ATGAATATGTAGAGCGATGG+AGG 0.586924 4_2:+6799255 None:intergenic
AGCATTTAAGGCGAAGGCGA+AGG 0.589667 4_2:+6795794 Msa0585710:CDS
TCTCTAGAATTTCTACGAAG+AGG 0.589731 4_2:-6797116 Msa0585720:CDS
CCTCTAGCAATGTTCTACTC+AGG 0.589927 4_2:+6796711 None:intergenic
ATTGCAGTCAAGCACGTGGT+GGG 0.590052 4_2:-6796773 Msa0585720:intron
CTGATCCGAATGTAGAACAC+TGG 0.590070 4_2:+6798217 None:intergenic
CAATCTATATTCAAGCTGCA+TGG 0.590954 4_2:+6795767 Msa0585710:CDS
GGAGGAAGCATTTAAGGCGA+AGG 0.591557 4_2:+6795788 Msa0585710:CDS
AATGCTACTATCCATGGCTA+TGG 0.594263 4_2:-6802052 Msa0585720:CDS
ATATTACGAATCTGATTACC+CGG 0.594747 4_2:+6795831 Msa0585710:CDS
GGTATTGCAAATCTTTGGGT+GGG 0.594858 4_2:+6798260 None:intergenic
TAGCATTGTGTTGTGTTGTG+TGG 0.596955 4_2:+6802068 None:intergenic
GCGATGATGCATCCACTGCT+CGG 0.598686 4_2:-6795045 Msa0585720:three_prime_UTR
CCTTGGACTTCAAGAAGAGG+AGG 0.602803 4_2:-6797144 Msa0585720:CDS
ATCTTCAAAGTCAAAATCAA+GGG 0.605002 4_2:+6799491 None:intergenic
ATATACCAGGGTATGACAGT+TGG 0.606713 4_2:+6794207 Msa0585710:CDS
GACTAGTACCTACCCTGGAG+AGG 0.607375 4_2:+6794801 Msa0585710:CDS
CCTTATATTGTCAATTACAG+TGG 0.607987 4_2:-6798056 Msa0585720:CDS
TGATATCCCTGCAGGACCTG+TGG 0.610302 4_2:-6799541 Msa0585720:CDS
ATCTTGAGCTAGATACACTA+CGG 0.610940 4_2:-6798411 Msa0585720:intron
AGGCCAAAGAAGAATTGTTG+AGG 0.612770 4_2:-6797169 Msa0585720:CDS
GAGAGTGTTACTACAGATGG+TGG 0.613056 4_2:+6795484 Msa0585710:CDS
GACCTACCTTCAATCAATGT+CGG 0.613772 4_2:+6794986 Msa0585710:intron
AAGGCGAAGGCGAAGGAAGG+AGG 0.615424 4_2:+6795801 Msa0585710:CDS
ACTCTTTCCCTTAGGTCCGG+AGG 0.617015 4_2:-6795074 Msa0585720:three_prime_UTR
AGATGACATAGCCATAGCCA+TGG 0.621508 4_2:+6802041 None:intergenic
AAAGGCGTGACTCCGAGCAG+TGG 0.621729 4_2:+6795033 Msa0585710:CDS
TCATGAACTTACTTCACCAA+GGG 0.622484 4_2:+6797261 None:intergenic
AAACAAAACCTCTCCAGGGT+AGG 0.625990 4_2:-6794809 Msa0585720:three_prime_UTR
GTGGTGAAGAGTTGCTAACA+TGG 0.626286 4_2:+6795554 Msa0585710:CDS
CGGGAAGTGATGATTCTGCA+AGG 0.626896 4_2:+6795851 Msa0585710:CDS
AAGACTTACATAGTTAGGGA+AGG 0.629987 4_2:+6795418 Msa0585710:CDS
ATGAAGCCACAGGTCCTGCA+GGG 0.630187 4_2:+6799535 None:intergenic
TACAAGTGGTTGAACACCCG+AGG 0.630986 4_2:+6795113 Msa0585710:CDS
ATTTGGAAGTATCATCTGCA+TGG 0.634373 4_2:-6796738 Msa0585720:CDS
TCTTCATCAGAGCCAAATCG+TGG 0.636063 4_2:-6801883 Msa0585720:CDS
GTGGTTAGCCTATAAATACA+TGG 0.636389 4_2:+6796198 None:intergenic
GACGCTACGACCAATACAAG+TGG 0.637852 4_2:+6795099 Msa0585710:CDS
CATTAATTAAACTGTGCATG+GGG 0.637978 4_2:+6796395 None:intergenic
TACACAAGCATAAGAACCAT+CGG 0.638469 4_2:+6797306 None:intergenic
TATTGCAGTCAAGCACGTGG+TGG 0.640120 4_2:-6796774 Msa0585720:intron
TTCATGAACTTACTTCACCA+AGG 0.640836 4_2:+6797260 None:intergenic
GTGATGCTTAAGCAAACCGA+TGG 0.643172 4_2:-6797322 Msa0585720:CDS
TGGAAAACAAAACCTCTCCA+GGG 0.644846 4_2:-6794813 Msa0585720:three_prime_UTR
TCGTCCATGTTAGCAAAGAG+AGG 0.645418 4_2:-6795343 Msa0585720:three_prime_UTR
GGGAAGTGATGATTCTGCAA+GGG 0.645571 4_2:+6795852 Msa0585710:CDS
GAGTAAATTGAGAAAGAAAG+CGG 0.647482 4_2:+6798239 None:intergenic
GGTCCTTGGACTTCAAGAAG+AGG 0.649587 4_2:-6797147 Msa0585720:CDS
TTTCTCCAACTGTCATACCC+TGG 0.659364 4_2:-6794212 Msa0585720:three_prime_UTR
TCGGATCAGAGATTATTCAA+AGG 0.660666 4_2:-6798203 Msa0585720:intron
CTTGGACTTCAAGAAGAGGA+GGG 0.667611 4_2:-6797143 Msa0585720:CDS
ATAGACAGTAACAAAATTTG+GGG 0.668163 4_2:-6794352 Msa0585720:three_prime_UTR
CTTCTGACTAGTACCTACCC+TGG 0.672528 4_2:+6794796 Msa0585710:CDS
CCTGAGTAGAACATTGCTAG+AGG 0.675597 4_2:-6796711 Msa0585720:exon
ACAAGTGGTTGAACACCCGA+GGG 0.676415 4_2:+6795114 Msa0585710:CDS
AACCGTGAAAGCTATGAGTG+AGG 0.683734 4_2:+6795621 Msa0585710:CDS
TTCGCAACAATGGAGAACAT+GGG 0.684012 4_2:+6795741 Msa0585710:CDS
GATGTGAAGGAAGAAAAGTG+AGG 0.687118 4_2:+6802007 None:intergenic
AGCTGCTTTGAACAACTGAG+AGG 0.692149 4_2:+6799786 None:intergenic
GAGTAGAACATTGCTAGAGG+AGG 0.693732 4_2:-6796708 Msa0585720:three_prime_UTR
TGGTGAAGAGTTGCTAACAT+GGG 0.697702 4_2:+6795555 Msa0585710:CDS
TATTACGAATCTGATTACCC+GGG 0.702346 4_2:+6795832 Msa0585710:CDS
AACCGACATTGATTGAAGGT+AGG 0.702813 4_2:-6794988 Msa0585720:three_prime_UTR
TCTATATTCAAGCTGCATGG+AGG 0.707083 4_2:+6795770 Msa0585710:CDS
TGGAAGTATCATCTGCATGG+CGG 0.725682 4_2:-6796735 Msa0585720:CDS
TGATATTGCAGTCAAGCACG+TGG 0.735833 4_2:-6796777 Msa0585720:intron
ATGCTGAAGGACAATCGCAG+CGG 0.746460 4_2:-6796098 Msa0585720:three_prime_UTR
GTTCAAGTAAGCATATACCA+GGG 0.749555 4_2:+6794195 Msa0585710:CDS
CAAGTGGTTGAACACCCGAG+GGG 0.768003 4_2:+6795115 Msa0585710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAGCAAATTTAAAAT+CGG - chr4_2:6795146-6795165 Msa0585720:three_prime_UTR 10.0%
!! TATTATTCAATATTTATCTA+TGG - chr4_2:6795569-6795588 Msa0585720:three_prime_UTR 10.0%
!!! ATTTTAACAAATTTTCATTA+TGG - chr4_2:6795988-6796007 Msa0585720:three_prime_UTR 10.0%
!!! ATCTAAAATTCTATAAATTA+TGG - chr4_2:6801640-6801659 Msa0585720:intron 10.0%
!!! AATTTGAAACTATATTTGTA+GGG - chr4_2:6795009-6795028 Msa0585720:three_prime_UTR 15.0%
!! TAATTTATCCTACTAATATT+TGG + chr4_2:6795918-6795937 Msa0585710:CDS 15.0%
!! ATACATCAAATTAAATAACT+AGG + chr4_2:6797762-6797781 None:intergenic 15.0%
!!! ATATTTTCTCAAATAATATG+AGG - chr4_2:6798135-6798154 Msa0585720:intron 15.0%
!! CGATTTATGAAAAATATTTA+GGG + chr4_2:6798899-6798918 None:intergenic 15.0%
!! ACGATTTATGAAAAATATTT+AGG + chr4_2:6798900-6798919 None:intergenic 15.0%
!!! TATAAATATTTTAAGAAGGT+TGG + chr4_2:6799356-6799375 None:intergenic 15.0%
!!! CTTGTATAAATATTTTAAGA+AGG + chr4_2:6799360-6799379 None:intergenic 15.0%
!! TTTAAAAGAAAAAACTATGT+AGG + chr4_2:6799636-6799655 None:intergenic 15.0%
!! TCATTATAATCATACATATT+TGG + chr4_2:6799801-6799820 None:intergenic 15.0%
!! ATATTTATAAAGGATGATAT+AGG - chr4_2:6801591-6801610 Msa0585720:intron 15.0%
!! AAATATATATGTATTAGTGT+CGG + chr4_2:6801762-6801781 None:intergenic 15.0%
!!! TTGCTATTTTCTCAAATTTT+CGG + chr4_2:6794773-6794792 Msa0585710:intron 20.0%
!! TCTTGATATTGTGAAATTTA+TGG - chr4_2:6794915-6794934 Msa0585720:intron 20.0%
!! TTGTGAAATTTATGGATAAA+TGG - chr4_2:6794923-6794942 Msa0585720:intron 20.0%
!!! CAATTTGAAACTATATTTGT+AGG - chr4_2:6795008-6795027 Msa0585720:three_prime_UTR 20.0%
!! GTAATTAAAAGGAGATTATT+TGG - chr4_2:6795428-6795447 Msa0585720:three_prime_UTR 20.0%
!! TTCAATATTTATCTATGGAA+AGG - chr4_2:6795574-6795593 Msa0585720:three_prime_UTR 20.0%
!! AGAAAAAATGTTGAAAATGT+AGG + chr4_2:6795613-6795632 Msa0585710:CDS 20.0%
!!! TAATAACAATATTTTGCTTG+CGG - chr4_2:6795680-6795699 Msa0585720:three_prime_UTR 20.0%
!!! TGAATTATTTGTTTCAGTTT+TGG - chr4_2:6795834-6795853 Msa0585720:three_prime_UTR 20.0%
!!! TGAAAATTTGTTAAAATCCA+TGG + chr4_2:6795985-6796004 Msa0585710:CDS 20.0%
!! TCAAATTCCTAAATATTTCA+AGG - chr4_2:6796209-6796228 Msa0585720:three_prime_UTR 20.0%
!! CAAATTCCTAAATATTTCAA+GGG - chr4_2:6796210-6796229 Msa0585720:three_prime_UTR 20.0%
!!! GAATATTCTTATTTACTATG+AGG - chr4_2:6796522-6796541 Msa0585720:three_prime_UTR 20.0%
!! TATGATATCTTCATTCTTTA+TGG + chr4_2:6796615-6796634 None:intergenic 20.0%
!!! TTCATCTTTATTTTGTTTCA+AGG - chr4_2:6796665-6796684 Msa0585720:three_prime_UTR 20.0%
!!! AAATTTTTCTTGAGTCATAT+TGG - chr4_2:6796886-6796905 Msa0585720:intron 20.0%
!!! AAAATCATGAAACCTTTTAA+TGG + chr4_2:6797085-6797104 None:intergenic 20.0%
!!! TTCATGATTTTTTATCTGTT+CGG - chr4_2:6797094-6797113 Msa0585720:intron 20.0%
!! ATTCTCGAATTAGAAATATA+GGG + chr4_2:6797470-6797489 None:intergenic 20.0%
!! TAAATAGTAAAACTTGATGT+AGG - chr4_2:6797628-6797647 Msa0585720:intron 20.0%
!!! AAGATTAAATAAAAGTGTTG+GGG + chr4_2:6797831-6797850 None:intergenic 20.0%
!!! CAAGATTAAATAAAAGTGTT+GGG + chr4_2:6797832-6797851 None:intergenic 20.0%
!!! TCAAGATTAAATAAAAGTGT+TGG + chr4_2:6797833-6797852 None:intergenic 20.0%
!!! TTGTACTCTTTTTTGTTTAT+TGG - chr4_2:6797875-6797894 Msa0585720:intron 20.0%
!! CAGATAATGATAAATATCTA+GGG + chr4_2:6798103-6798122 None:intergenic 20.0%
!! TCAGATAATGATAAATATCT+AGG + chr4_2:6798104-6798123 None:intergenic 20.0%
!! TCAAATTGTCAATATGAAAA+AGG - chr4_2:6798739-6798758 Msa0585720:intron 20.0%
!! CAAATTGTCAATATGAAAAA+GGG - chr4_2:6798740-6798759 Msa0585720:intron 20.0%
!! ATTCATTTGTGTAATGAATT+TGG - chr4_2:6798774-6798793 Msa0585720:intron 20.0%
!! ATAAAAATAAACTAGCTATC+TGG + chr4_2:6798827-6798846 None:intergenic 20.0%
!!! ATATTTTTCATAAATCGTTC+AGG - chr4_2:6798902-6798921 Msa0585720:intron 20.0%
!! ATACCTTATCTAATATCTAT+TGG - chr4_2:6799058-6799077 Msa0585720:intron 20.0%
!!! ATGTGTAAATTTTACATAAG+AGG + chr4_2:6799267-6799286 None:intergenic 20.0%
!! ATAGGATCATAAATCATATT+TGG - chr4_2:6799415-6799434 Msa0585720:intron 20.0%
!! ATGTTTACAGTAAAAACTTT+CGG - chr4_2:6801360-6801379 Msa0585720:intron 20.0%
!! GAATCAAAGCATATTTATAA+AGG - chr4_2:6801581-6801600 Msa0585720:intron 20.0%
!!! TTATAAACTGAGTGTTTTAT+AGG - chr4_2:6801799-6801818 Msa0585720:CDS 20.0%
! TTAGTAGTAGAAATTGAAGA+AGG + chr4_2:6794296-6794315 Msa0585710:CDS 25.0%
! AGAATGAAAATTAAACGTAC+GGG + chr4_2:6794523-6794542 Msa0585710:intron 25.0%
! GAGAATGAAAATTAAACGTA+CGG + chr4_2:6794524-6794543 Msa0585710:intron 25.0%
! TATTCATTAATTGACTGATG+TGG + chr4_2:6794692-6794711 Msa0585710:intron 25.0%
! AACTATATTTGTAGGGAATT+TGG - chr4_2:6795016-6795035 Msa0585720:three_prime_UTR 25.0%
! TCAATATTTGAATCCAACAT+TGG - chr4_2:6795093-6795112 Msa0585720:three_prime_UTR 25.0%
!!! TAGTTGCTTTGCTATTATTA+TGG - chr4_2:6795259-6795278 Msa0585720:intron 25.0%
! TGTATTCCAAATTACTTGTT+TGG - chr4_2:6795331-6795350 Msa0585720:intron 25.0%
! AAAGATCCAAACAAGTAATT+TGG + chr4_2:6795340-6795359 Msa0585710:CDS 25.0%
!!! TAGAGAATCTATTTTTGTGT+AGG + chr4_2:6795365-6795384 Msa0585710:CDS 25.0%
! GGGACATAATAGTAATTAAA+AGG - chr4_2:6795417-6795436 Msa0585720:three_prime_UTR 25.0%
! TTTGGTTGAGAGATAATATT+TGG - chr4_2:6795446-6795465 Msa0585720:three_prime_UTR 25.0%
! TTATATGAAGAAATGTTGCT+GGG + chr4_2:6795770-6795789 Msa0585710:CDS 25.0%
!! TGTATATAGGTCTATGTTTT+TGG - chr4_2:6795865-6795884 Msa0585720:three_prime_UTR 25.0%
! ACAAAGTTCCAAATATTAGT+AGG - chr4_2:6795907-6795926 Msa0585720:three_prime_UTR 25.0%
! TTAAAATCCATGGTAAACAA+AGG + chr4_2:6795975-6795994 Msa0585710:CDS 25.0%
!! ATATTTTGCTAATCAGAAGT+AGG + chr4_2:6796039-6796058 None:intergenic 25.0%
!!! TTATTTTGTTTCAAGGTTGA+TGG - chr4_2:6796672-6796691 Msa0585720:three_prime_UTR 25.0%
! ATCTTCAAAGTCAAAATCAA+GGG + chr4_2:6796769-6796788 None:intergenic 25.0%
! TAATGCATAAGTTTCAAACA+TGG + chr4_2:6796859-6796878 None:intergenic 25.0%
!! ATTAAATTTCTTAGAAGTGC+AGG - chr4_2:6796960-6796979 Msa0585720:intron 25.0%
!!! GTTCTTTCATTTGTTGTTTT+TGG - chr4_2:6797245-6797264 Msa0585720:intron 25.0%
! TAGTATGATTATATTCCCTT+GGG + chr4_2:6797394-6797413 None:intergenic 25.0%
! TTAGTATGATTATATTCCCT+TGG + chr4_2:6797395-6797414 None:intergenic 25.0%
! TTCTCGAATTAGAAATATAG+GGG + chr4_2:6797469-6797488 None:intergenic 25.0%
! CATTCTCGAATTAGAAATAT+AGG + chr4_2:6797471-6797490 None:intergenic 25.0%
!! TTATATTGTGCTATTGGTAA+TGG + chr4_2:6797505-6797524 None:intergenic 25.0%
!! TTTGGTTTATATTGTGCTAT+TGG + chr4_2:6797511-6797530 None:intergenic 25.0%
!! TCAAGTTTTACTATTTACTG+CGG + chr4_2:6797625-6797644 None:intergenic 25.0%
! GAAATGTGAGTTTCTTAATA+TGG - chr4_2:6797684-6797703 Msa0585720:intron 25.0%
!! TTCTATTACTACTATTTTGC+AGG - chr4_2:6797787-6797806 Msa0585720:intron 25.0%
! ATAAATATATAGCTGTACCA+GGG + chr4_2:6798245-6798264 None:intergenic 25.0%
! TATAAATATATAGCTGTACC+AGG + chr4_2:6798246-6798265 None:intergenic 25.0%
! ATCATGTATCACAGATTATT+AGG + chr4_2:6798327-6798346 None:intergenic 25.0%
! TGTTAATATTAGATAACTGG+TGG + chr4_2:6798454-6798473 None:intergenic 25.0%
!! TGGTGTTAATATTAGATAAC+TGG + chr4_2:6798457-6798476 None:intergenic 25.0%
! TCAGTATATGTAACAACAAT+AGG - chr4_2:6798496-6798515 Msa0585720:intron 25.0%
! AATGAGAAATAGAGGAAATA+TGG + chr4_2:6798600-6798619 None:intergenic 25.0%
! CACAAAGAATTATCAAAATC+TGG - chr4_2:6798654-6798673 Msa0585720:intron 25.0%
! AGATAATATGCAATAAGGTA+AGG + chr4_2:6798689-6798708 None:intergenic 25.0%
! GATACAGATAATATGCAATA+AGG + chr4_2:6798694-6798713 None:intergenic 25.0%
!! ATTGGCAAATAAAAGCATAT+TGG + chr4_2:6798863-6798882 None:intergenic 25.0%
! TCACAGTTAGTAAGAAAATA+AGG + chr4_2:6799028-6799047 None:intergenic 25.0%
! AAGCCAATAGATATTAGATA+AGG + chr4_2:6799064-6799083 None:intergenic 25.0%
! TTATTTCAACCATAGCAAAA+AGG + chr4_2:6799224-6799243 None:intergenic 25.0%
!! AGCCAAATTTTCATTATAGT+GGG - chr4_2:6799387-6799406 Msa0585720:intron 25.0%
! AACCCACTATAATGAAAATT+TGG + chr4_2:6799392-6799411 None:intergenic 25.0%
!!! TCATTATAGTGGGTTATTAT+AGG - chr4_2:6799397-6799416 Msa0585720:intron 25.0%
! ACATTAATTAAACTGTGCAT+GGG + chr4_2:6799866-6799885 None:intergenic 25.0%
! TACATTAATTAAACTGTGCA+TGG + chr4_2:6799867-6799886 None:intergenic 25.0%
! GTGTATGACATATATTATTC+AGG + chr4_2:6800942-6800961 None:intergenic 25.0%
! TGAGAAAATAAAGAGTTAGA+AGG - chr4_2:6800972-6800991 Msa0585720:intron 25.0%
! TTGTTTGAATTTAGTCAGAA+GGG + chr4_2:6801058-6801077 None:intergenic 25.0%
! TTTGTTTGAATTTAGTCAGA+AGG + chr4_2:6801059-6801078 None:intergenic 25.0%
!!! ATATCTCTTCTAAGATCTTT+TGG - chr4_2:6801090-6801109 Msa0585720:intron 25.0%
! TCCATAGTAATAGCTATTAT+GGG + chr4_2:6801428-6801447 None:intergenic 25.0%
! TTCCATAGTAATAGCTATTA+TGG + chr4_2:6801429-6801448 None:intergenic 25.0%
!!! GTTTTATAGGTGTTATAAAG+AGG - chr4_2:6801812-6801831 Msa0585720:CDS 25.0%
! CATAGACAGTAACAAAATTT+GGG - chr4_2:6801904-6801923 Msa0585720:CDS 25.0%
! ATAGACAGTAACAAAATTTG+GGG - chr4_2:6801905-6801924 Msa0585720:CDS 25.0%
! AATTCACATTTCTTGTATTG+TGG + chr4_2:6802090-6802109 None:intergenic 25.0%
! TGATGAAGAAGCTTCTTTTT+CGG + chr4_2:6794363-6794382 Msa0585710:CDS 30.0%
TAAACAGATACACCTGATTT+AGG + chr4_2:6794407-6794426 Msa0585710:intron 30.0%
GAGTGTAAGTAGTTTATGTT+TGG - chr4_2:6794572-6794591 Msa0585720:intron 30.0%
GTTCTATGTAGTACATATCA+CGG + chr4_2:6794872-6794891 Msa0585710:CDS 30.0%
!! TAGAACTAGTCTTATCACTA+TGG - chr4_2:6794886-6794905 Msa0585720:intron 30.0%
CTGTCAAAATCTTTATGTTG+CGG - chr4_2:6794966-6794985 Msa0585720:intron 30.0%
GGATTCAAATATTGATCAAC+TGG + chr4_2:6795088-6795107 Msa0585710:CDS 30.0%
! AAATTTAAAATCGGAGCTGT+TGG - chr4_2:6795155-6795174 Msa0585720:three_prime_UTR 30.0%
! AATTTAAAATCGGAGCTGTT+GGG - chr4_2:6795156-6795175 Msa0585720:three_prime_UTR 30.0%
! TTGCTATTATTATGGATGCA+TGG - chr4_2:6795267-6795286 Msa0585720:intron 30.0%
CTAAAGTCACCAAATATCAA+CGG + chr4_2:6795388-6795407 Msa0585710:CDS 30.0%
CAAAATGTAGACAATCGAAA+GGG - chr4_2:6795496-6795515 Msa0585720:three_prime_UTR 30.0%
AGGAACAAAAAAGATCAGAA+TGG + chr4_2:6795724-6795743 Msa0585710:CDS 30.0%
!!! ATTCTGATCTTTTTTGTTCC+TGG - chr4_2:6795723-6795742 Msa0585720:three_prime_UTR 30.0%
!!! TTCTGATCTTTTTTGTTCCT+GGG - chr4_2:6795724-6795743 Msa0585720:three_prime_UTR 30.0%
CTTATATGAAGAAATGTTGC+TGG + chr4_2:6795771-6795790 Msa0585710:CDS 30.0%
CAGCAACATTTCTTCATATA+AGG - chr4_2:6795769-6795788 Msa0585720:three_prime_UTR 30.0%
TTTGGTCCTTCATTGTATAT+AGG - chr4_2:6795852-6795871 Msa0585720:three_prime_UTR 30.0%
CATAGACCTATATACAATGA+AGG + chr4_2:6795861-6795880 Msa0585710:CDS 30.0%
TTGTAGCTAAGCTAATATGA+TGG - chr4_2:6796087-6796106 Msa0585720:three_prime_UTR 30.0%
TGTAGCTAAGCTAATATGAT+GGG - chr4_2:6796088-6796107 Msa0585720:three_prime_UTR 30.0%
GAAGATCCCTTGAAATATTT+AGG + chr4_2:6796219-6796238 None:intergenic 30.0%
!!! TAGATTTGGGACTTTTTTGT+AGG - chr4_2:6796418-6796437 Msa0585720:three_prime_UTR 30.0%
! CCAATAGTGTGATCATTTTA+TGG + chr4_2:6796565-6796584 None:intergenic 30.0%
CCATAAAATGATCACACTAT+TGG - chr4_2:6796562-6796581 Msa0585720:three_prime_UTR 30.0%
ATGAAACTTCAGAATATGAC+AGG + chr4_2:6796650-6796669 None:intergenic 30.0%
CATCTTCAAAGTCAAAATCA+AGG + chr4_2:6796770-6796789 None:intergenic 30.0%
TTAATGAATATGTAGAGCGA+TGG + chr4_2:6797008-6797027 None:intergenic 30.0%
! TGGTTATATTGAGAAGTATG+TGG - chr4_2:6797046-6797065 Msa0585720:intron 30.0%
! ATATTGAGAAGTATGTGGTA+TGG - chr4_2:6797051-6797070 Msa0585720:intron 30.0%
CATTCTTATCTGTATTAGCT+TGG - chr4_2:6797147-6797166 Msa0585720:CDS 30.0%
!!! GACGTTTATTTTTTCTCCAT+TGG - chr4_2:6797190-6797209 Msa0585720:intron 30.0%
TGCACATTATTTATCACCAA+TGG + chr4_2:6797209-6797228 None:intergenic 30.0%
AATTTATACTGTCAAACCCA+AGG - chr4_2:6797375-6797394 Msa0585720:intron 30.0%
ATTTATACTGTCAAACCCAA+GGG - chr4_2:6797376-6797395 Msa0585720:intron 30.0%
! ACAGGGATTATTCTTTCTTT+TGG + chr4_2:6797529-6797548 None:intergenic 30.0%
TTCAGTATAATACAGCTGTA+GGG + chr4_2:6797552-6797571 None:intergenic 30.0%
GAGTAAATTGAGAAAGAAAG+CGG + chr4_2:6798021-6798040 None:intergenic 30.0%
CCACTGTAATTGACAATATA+AGG + chr4_2:6798204-6798223 None:intergenic 30.0%
CCTTATATTGTCAATTACAG+TGG - chr4_2:6798201-6798220 Msa0585720:intron 30.0%
GAGAAGTTGTGTTAAAAGAA+AGG - chr4_2:6798404-6798423 Msa0585720:intron 30.0%
ATTGTCAATATGAAAAAGGG+AGG - chr4_2:6798743-6798762 Msa0585720:intron 30.0%
! TAGGGCATCATTCATATAAT+TGG + chr4_2:6798881-6798900 None:intergenic 30.0%
!! TAATATCTATTGGCTTGTCT+AGG - chr4_2:6799068-6799087 Msa0585720:intron 30.0%
GTAAAATTTACACATTCCTG+TGG - chr4_2:6799272-6799291 Msa0585720:CDS 30.0%
GCACATTAGGGAATATAATT+GGG + chr4_2:6799326-6799345 None:intergenic 30.0%
TGCACATTAGGGAATATAAT+TGG + chr4_2:6799327-6799346 None:intergenic 30.0%
GTTGGTATTTATGCACATTA+GGG + chr4_2:6799338-6799357 None:intergenic 30.0%
! GAGCCAAATTTTCATTATAG+TGG - chr4_2:6799386-6799405 Msa0585720:intron 30.0%
!! GTTGGTAACAGATTTAAAAC+TGG + chr4_2:6799454-6799473 None:intergenic 30.0%
CATTAATTAAACTGTGCATG+GGG + chr4_2:6799865-6799884 None:intergenic 30.0%
! ATACAGTGTGACAAACATTT+TGG + chr4_2:6800086-6800105 None:intergenic 30.0%
ATATTACGAATCTGATTACC+CGG + chr4_2:6800429-6800448 None:intergenic 30.0%
AGAGAAGACTTACATAGTTA+GGG + chr4_2:6800846-6800865 None:intergenic 30.0%
GTCTTCTCTGTATATAAACT+CGG - chr4_2:6800857-6800876 Msa0585720:intron 30.0%
CCTTGTGTTATAAATGCAAT+TGG + chr4_2:6801300-6801319 None:intergenic 30.0%
CCAATTGCATTTATAACACA+AGG - chr4_2:6801297-6801316 Msa0585720:intron 30.0%
CCATAGTAATAGCTATTATG+GGG + chr4_2:6801427-6801446 None:intergenic 30.0%
AAGCAAAACAGAAGGATATT+TGG - chr4_2:6801507-6801526 Msa0585720:intron 30.0%
TTGTAGATTCACTTGATGTT+GGG + chr4_2:6801621-6801640 None:intergenic 30.0%
ATTGTAGATTCACTTGATGT+TGG + chr4_2:6801622-6801641 None:intergenic 30.0%
TCTGATCTTCATATCAAAGT+CGG + chr4_2:6801685-6801704 None:intergenic 30.0%
ATGGCTAATGTGAAAAACAT+AGG - chr4_2:6801733-6801752 Msa0585720:intron 30.0%
! ATTTTGTTACTGTCTATGGT+GGG + chr4_2:6801902-6801921 None:intergenic 30.0%
! AATTTTGTTACTGTCTATGG+TGG + chr4_2:6801903-6801922 None:intergenic 30.0%
! CCAAATTTTGTTACTGTCTA+TGG + chr4_2:6801906-6801925 None:intergenic 30.0%
CCATAGACAGTAACAAAATT+TGG - chr4_2:6801903-6801922 Msa0585720:CDS 30.0%
AAATTTGGGGAAAACTTCTA+TGG - chr4_2:6801918-6801937 Msa0585720:CDS 30.0%
!! GATAACTCAGCTTTTAACTA+TGG + chr4_2:6801982-6802001 None:intergenic 30.0%
! AAATTGGCTCAGCACAAATA+TGG + chr4_2:6794164-6794183 Msa0585710:CDS 35.0%
! CTCAATTTTGCTCTTCAAGA+TGG - chr4_2:6794473-6794492 Msa0585720:intron 35.0%
!!! AATTTTCGGTGTCTACATGT+CGG + chr4_2:6794759-6794778 Msa0585710:intron 35.0%
TGTCATATTACTCAGTGTAG+TGG - chr4_2:6794819-6794838 Msa0585720:three_prime_UTR 35.0%
CAAGCTAATGCATGAATACA+AGG + chr4_2:6795062-6795081 Msa0585710:CDS 35.0%
AAATCAGAGTCATCCAATGT+TGG + chr4_2:6795109-6795128 Msa0585710:CDS 35.0%
! CTATTGACTATGTGAACACA+TGG - chr4_2:6795200-6795219 Msa0585720:three_prime_UTR 35.0%
ATGGATTCTTTGACTGTAGT+AGG - chr4_2:6795219-6795238 Msa0585720:intron 35.0%
GATTCTCTACCGTTGATATT+TGG - chr4_2:6795376-6795395 Msa0585720:three_prime_UTR 35.0%
! TTGGTGACTTTAGTGTACTT+AGG - chr4_2:6795395-6795414 Msa0585720:three_prime_UTR 35.0%
TGGTGACTTTAGTGTACTTA+GGG - chr4_2:6795396-6795415 Msa0585720:three_prime_UTR 35.0%
! CCTTTCGATTGTCTACATTT+TGG + chr4_2:6795498-6795517 Msa0585710:CDS 35.0%
CCAAAATGTAGACAATCGAA+AGG - chr4_2:6795495-6795514 Msa0585720:three_prime_UTR 35.0%
!!! TCTGATCTTTTTTGTTCCTG+GGG - chr4_2:6795725-6795744 Msa0585720:three_prime_UTR 35.0%
! TAAGGTACTATTCTTTGCTC+TGG - chr4_2:6795787-6795806 Msa0585720:three_prime_UTR 35.0%
! ATTGACAGTTGACGTTTTTG+AGG - chr4_2:6796151-6796170 Msa0585720:three_prime_UTR 35.0%
! TTTTCTTACTATGCAAGCTC+TGG + chr4_2:6796313-6796332 None:intergenic 35.0%
!! GAAGTACTTGTTGCTTTGAA+AGG + chr4_2:6796357-6796376 None:intergenic 35.0%
!!! GAAGCTTTTCTGGTTTATCA+GGG + chr4_2:6796448-6796467 None:intergenic 35.0%
! GACTTTGAAGATGAGAATGA+AGG - chr4_2:6796777-6796796 Msa0585720:intron 35.0%
! ATGAAACCTTTTAATGGCAG+AGG + chr4_2:6797079-6797098 None:intergenic 35.0%
! TAGCTTGGTCTTTGATTCTT+TGG - chr4_2:6797162-6797181 Msa0585720:CDS 35.0%
! TTGGTCTTTGATTCTTTGGT+AGG - chr4_2:6797166-6797185 Msa0585720:CDS 35.0%
AATCATACTAAGAACACCTG+AGG - chr4_2:6797404-6797423 Msa0585720:intron 35.0%
CTTCAGTATAATACAGCTGT+AGG + chr4_2:6797553-6797572 None:intergenic 35.0%
!! TGACTTTTGATAGCCTTTGT+TGG - chr4_2:6797660-6797679 Msa0585720:intron 35.0%
AACTCACATTTCACCAACAA+AGG + chr4_2:6797676-6797695 None:intergenic 35.0%
AACACGTTAATTATGTGCAC+TGG - chr4_2:6797731-6797750 Msa0585720:intron 35.0%
!! AATAAAAGTGTTGGGGTTGA+TGG + chr4_2:6797824-6797843 None:intergenic 35.0%
ATCTTGAGCTAGATACACTA+CGG - chr4_2:6797846-6797865 Msa0585720:intron 35.0%
AAGCGGTATTGCAAATCTTT+GGG + chr4_2:6798004-6798023 None:intergenic 35.0%
AAAGCGGTATTGCAAATCTT+TGG + chr4_2:6798005-6798024 None:intergenic 35.0%
TTACTCCAGTGTTCTACATT+CGG - chr4_2:6798035-6798054 Msa0585720:CDS 35.0%
TCGGATCAGAGATTATTCAA+AGG - chr4_2:6798054-6798073 Msa0585720:CDS 35.0%
AGGGACTATTCAATAGAGAA+GGG + chr4_2:6798084-6798103 None:intergenic 35.0%
TAGGGACTATTCAATAGAGA+AGG + chr4_2:6798085-6798104 None:intergenic 35.0%
TATTAACACCAGATCTTGCA+AGG - chr4_2:6798466-6798485 Msa0585720:intron 35.0%
AAAATCTTCCTTGCAAGATC+TGG + chr4_2:6798477-6798496 None:intergenic 35.0%
! TGCTTACATACTTCCCTTTT+TGG - chr4_2:6798539-6798558 Msa0585720:intron 35.0%
AATTACTCCCATGCCAAAAA+GGG + chr4_2:6798555-6798574 None:intergenic 35.0%
TAATTACTCCCATGCCAAAA+AGG + chr4_2:6798556-6798575 None:intergenic 35.0%
GAGTAATTAGTAAGGGAAAG+AGG - chr4_2:6798567-6798586 Msa0585720:intron 35.0%
TAGTAAGGGAAAGAGGAATA+TGG - chr4_2:6798574-6798593 Msa0585720:intron 35.0%
TGTGACTTACTTCAAGTCAA+AGG + chr4_2:6798638-6798657 None:intergenic 35.0%
TGTATCACCTGAAAAAAGCA+GGG - chr4_2:6798708-6798727 Msa0585720:intron 35.0%
TACACAAGCATAAGAACCAT+CGG + chr4_2:6798954-6798973 None:intergenic 35.0%
TCATGAACTTACTTCACCAA+GGG + chr4_2:6798999-6799018 None:intergenic 35.0%
TTCATGAACTTACTTCACCA+AGG + chr4_2:6799000-6799019 None:intergenic 35.0%
ATGCATAAAAGCAACGCAAA+CGG + chr4_2:6799193-6799212 None:intergenic 35.0%
! GGTTGGTATTTATGCACATT+AGG + chr4_2:6799339-6799358 None:intergenic 35.0%
! TTAAAACTGGACTAGAGACA+TGG + chr4_2:6799441-6799460 None:intergenic 35.0%
ACTGCAATATCACAAGATGT+TGG + chr4_2:6799472-6799491 None:intergenic 35.0%
!! ATTTGGAAGTATCATCTGCA+TGG - chr4_2:6799519-6799538 Msa0585720:CDS 35.0%
! ACTTTTGCCAAAGAAATACG+AGG - chr4_2:6799671-6799690 Msa0585720:intron 35.0%
CCAAGTTTAACACATCTACA+TGG + chr4_2:6799979-6799998 None:intergenic 35.0%
CCATGTAGATGTGTTAAACT+TGG - chr4_2:6799976-6799995 Msa0585720:CDS 35.0%
!! TAGGCTTGTTGAATTTCGAT+AGG + chr4_2:6800036-6800055 None:intergenic 35.0%
!! GTGGTTAGCCTATAAATACA+TGG + chr4_2:6800062-6800081 None:intergenic 35.0%
TACAAATAGTGTCATGCTGA+AGG - chr4_2:6800146-6800165 Msa0585720:intron 35.0%
TGAAGAAGTTCTTGCTTATG+AGG + chr4_2:6800212-6800231 None:intergenic 35.0%
ATACAACAGTCTATGCTTCT+CGG + chr4_2:6800343-6800362 None:intergenic 35.0%
CCTCAAAGTTCGTCAAAATT+TGG + chr4_2:6800371-6800390 None:intergenic 35.0%
!! CCAAATTTTGACGAACTTTG+AGG - chr4_2:6800368-6800387 Msa0585720:intron 35.0%
TATTACGAATCTGATTACCC+GGG + chr4_2:6800428-6800447 None:intergenic 35.0%
CAATCTATATTCAAGCTGCA+TGG + chr4_2:6800493-6800512 None:intergenic 35.0%
TCCATTGTTGCGAATAGAAA+CGG - chr4_2:6800525-6800544 Msa0585720:intron 35.0%
TAGACACATACATAGTAGAC+AGG + chr4_2:6800564-6800583 None:intergenic 35.0%
! TTGAAGGAAGGTGATTTTTG+TGG + chr4_2:6800725-6800744 None:intergenic 35.0%
ATGAACAACATCTCATCAAC+TGG - chr4_2:6800812-6800831 Msa0585720:intron 35.0%
AAGACTTACATAGTTAGGGA+AGG + chr4_2:6800842-6800861 None:intergenic 35.0%
CAGAGAAGACTTACATAGTT+AGG + chr4_2:6800847-6800866 None:intergenic 35.0%
TGCAATGAGAAATCTCAGAA+AGG - chr4_2:6801008-6801027 Msa0585720:intron 35.0%
CCCCATAATAGCTATTACTA+TGG - chr4_2:6801424-6801443 Msa0585720:intron 35.0%
!! TTTGCTTTTCACAGTACACT+TGG + chr4_2:6801494-6801513 None:intergenic 35.0%
ACTGTGAAAAGCAAAACAGA+AGG - chr4_2:6801499-6801518 Msa0585720:intron 35.0%
! TTTTCACATTAGCCATGTAG+AGG + chr4_2:6801729-6801748 None:intergenic 35.0%
TGTTATAAAGAGGACTCATG+TGG - chr4_2:6801822-6801841 Msa0585720:CDS 35.0%
! TTTTGTTACTGTCTATGGTG+GGG + chr4_2:6801901-6801920 None:intergenic 35.0%
GTTCAAGTAAGCATATACCA+GGG + chr4_2:6802065-6802084 None:intergenic 35.0%
AGTTCAAGTAAGCATATACC+AGG + chr4_2:6802066-6802085 None:intergenic 35.0%
TAGCATTGTGTTGTGTTGTG+TGG + chr4_2:6794192-6794211 Msa0585710:CDS 40.0%
CAACACAATGCTACTATCCA+TGG - chr4_2:6794199-6794218 Msa0585720:three_prime_UTR 40.0%
AATGCTACTATCCATGGCTA+TGG - chr4_2:6794205-6794224 Msa0585720:three_prime_UTR 40.0%
GATGTGAAGGAAGAAAAGTG+AGG + chr4_2:6794253-6794272 Msa0585710:CDS 40.0%
!! GATAGTGGAGAAAGATGTGA+AGG + chr4_2:6794266-6794285 Msa0585710:CDS 40.0%
GAAGAAGGTGAAGAAGATAG+TGG + chr4_2:6794281-6794300 Msa0585710:CDS 40.0%
TTAGGATCGAAACCACGATT+TGG + chr4_2:6794389-6794408 Msa0585710:intron 40.0%
GCGAGAACTTCATAAGACTT+AGG + chr4_2:6794434-6794453 Msa0585710:intron 40.0%
GTACATATCACGGACACTTA+CGG + chr4_2:6794862-6794881 Msa0585710:CDS 40.0%
!! GCTGTTGGGTATTGATTCTA+TGG - chr4_2:6795170-6795189 Msa0585720:three_prime_UTR 40.0%
GGTGACTTTAGTGTACTTAG+GGG - chr4_2:6795397-6795416 Msa0585720:three_prime_UTR 40.0%
AAGTAGGCATAGATGAACTG+AGG + chr4_2:6796023-6796042 Msa0585710:CDS 40.0%
TGCCAACATTCAACTTGTCT+TGG - chr4_2:6796254-6796273 Msa0585720:three_prime_UTR 40.0%
! AGCCAAGACAAGTTGAATGT+TGG + chr4_2:6796259-6796278 None:intergenic 40.0%
GGCTGTTGTAAAAAAGCTAC+AGG - chr4_2:6796275-6796294 Msa0585720:three_prime_UTR 40.0%
TCCGAGATGTCACTAGATTT+GGG - chr4_2:6796405-6796424 Msa0585720:three_prime_UTR 40.0%
TCCCAAATCTAGTGACATCT+CGG + chr4_2:6796409-6796428 None:intergenic 40.0%
!!! CGAAGCTTTTCTGGTTTATC+AGG + chr4_2:6796449-6796468 None:intergenic 40.0%
!! AAGGTTGATGGCCTTACTAT+AGG - chr4_2:6796684-6796703 Msa0585720:three_prime_UTR 40.0%
CATCTAAGGAGCCTATAGTA+AGG + chr4_2:6796698-6796717 None:intergenic 40.0%
GATCTGAAAAATGAAGCCAC+AGG + chr4_2:6796735-6796754 None:intergenic 40.0%
! AGAATGAAGGTTAGCTCTTG+CGG - chr4_2:6796790-6796809 Msa0585720:intron 40.0%
ATGAATATGTAGAGCGATGG+AGG + chr4_2:6797005-6797024 None:intergenic 40.0%
AATAGCAGTACACGTGAACT+TGG - chr4_2:6797026-6797045 Msa0585720:intron 40.0%
AACACCTGAGGAACAAAAGA+GGG - chr4_2:6797416-6797435 Msa0585720:intron 40.0%
AGCTACCGGAAAATTGATAG+AGG - chr4_2:6797439-6797458 Msa0585720:intron 40.0%
! GCACACCTCTATCAATTTTC+CGG + chr4_2:6797447-6797466 None:intergenic 40.0%
ATAATACAGCTGTAGGGACA+GGG + chr4_2:6797546-6797565 None:intergenic 40.0%
TATAATACAGCTGTAGGGAC+AGG + chr4_2:6797547-6797566 None:intergenic 40.0%
! GATCAAGTTGTGTGGTCAAT+TGG + chr4_2:6797589-6797608 None:intergenic 40.0%
TACTATTTACTGCGGTCACT+GGG + chr4_2:6797617-6797636 None:intergenic 40.0%
TTACTATTTACTGCGGTCAC+TGG + chr4_2:6797618-6797637 None:intergenic 40.0%
GTAAAACTTGATGTAGGCTC+TGG - chr4_2:6797634-6797653 Msa0585720:intron 40.0%
GTCTAAGTCCTTAACTACGT+CGG - chr4_2:6797911-6797930 Msa0585720:intron 40.0%
ATAAGTGTCCGACGTAGTTA+AGG + chr4_2:6797922-6797941 None:intergenic 40.0%
!! TGAATTCGCAGTGCTGATTT+AGG - chr4_2:6797962-6797981 Msa0585720:intron 40.0%
GGTATTGCAAATCTTTGGGT+GGG + chr4_2:6798000-6798019 None:intergenic 40.0%
GGACTATTCAATAGAGAAGG+GGG + chr4_2:6798082-6798101 None:intergenic 40.0%
GGGACTATTCAATAGAGAAG+GGG + chr4_2:6798083-6798102 None:intergenic 40.0%
!! ACATACTTCCCTTTTTGGCA+TGG - chr4_2:6798544-6798563 Msa0585720:intron 40.0%
!! CATACTTCCCTTTTTGGCAT+GGG - chr4_2:6798545-6798564 Msa0585720:intron 40.0%
TGGCATGGGAGTAATTAGTA+AGG - chr4_2:6798559-6798578 Msa0585720:intron 40.0%
GGCATGGGAGTAATTAGTAA+GGG - chr4_2:6798560-6798579 Msa0585720:intron 40.0%
CCACGTCAAATGAGAAATAG+AGG + chr4_2:6798608-6798627 None:intergenic 40.0%
! CCTCTATTTCTCATTTGACG+TGG - chr4_2:6798605-6798624 Msa0585720:intron 40.0%
CTGTATCACCTGAAAAAAGC+AGG - chr4_2:6798707-6798726 Msa0585720:intron 40.0%
!!! ATCTATGCCCTGCTTTTTTC+AGG + chr4_2:6798718-6798737 None:intergenic 40.0%
AGGCCAAAGAAGAATTGTTG+AGG - chr4_2:6799088-6799107 Msa0585720:intron 40.0%
GGCCAAAGAAGAATTGTTGA+GGG - chr4_2:6799089-6799108 Msa0585720:intron 40.0%
GACCCTCAACAATTCTTCTT+TGG + chr4_2:6799094-6799113 None:intergenic 40.0%
! TGCTTGTGTCCTTTTTGCTA+TGG - chr4_2:6799212-6799231 Msa0585720:CDS 40.0%
GTGGGAAGAAGATTCTGATT+TGG - chr4_2:6799502-6799521 Msa0585720:CDS 40.0%
! CTGTGTTTTATCACACGCAA+TGG - chr4_2:6799574-6799593 Msa0585720:intron 40.0%
TGCTCATATGCAGAGAAAGA+AGG - chr4_2:6799605-6799624 Msa0585720:intron 40.0%
GCTTTGTCCTCGTATTTCTT+TGG + chr4_2:6799681-6799700 None:intergenic 40.0%
GCCTAGAGCCATGTATTTAT+AGG - chr4_2:6800051-6800070 Msa0585720:intron 40.0%
GCCTATAAATACATGGCTCT+AGG + chr4_2:6800055-6800074 None:intergenic 40.0%
!! GTGTGACAAACATTTTGGTG+TGG + chr4_2:6800081-6800100 None:intergenic 40.0%
!! TCATTGAGAGCACTGAAATC+AGG - chr4_2:6800239-6800258 Msa0585720:intron 40.0%
TCTATATTCAAGCTGCATGG+AGG + chr4_2:6800490-6800509 None:intergenic 40.0%
TTCGCAACAATGGAGAACAT+GGG + chr4_2:6800519-6800538 None:intergenic 40.0%
ATTCGCAACAATGGAGAACA+TGG + chr4_2:6800520-6800539 None:intergenic 40.0%
TCCGTTTCTATTCGCAACAA+TGG + chr4_2:6800529-6800548 None:intergenic 40.0%
TACCTCACTCATAGCTTTCA+CGG - chr4_2:6800634-6800653 Msa0585720:intron 40.0%
! TTCACGGTTCTTGTTGATGA+TGG - chr4_2:6800650-6800669 Msa0585720:intron 40.0%
TGGTGAAGAGTTGCTAACAT+GGG + chr4_2:6800705-6800724 None:intergenic 40.0%
!!! AACAGAGGAGTTTTGAAGGA+AGG + chr4_2:6800737-6800756 None:intergenic 40.0%
!! CTTCAACAGAGGAGTTTTGA+AGG + chr4_2:6800741-6800760 None:intergenic 40.0%
!! CTAGAGAGTGTTACTACAGA+TGG + chr4_2:6800779-6800798 None:intergenic 40.0%
GAGATGTTGTTCATCATTCG+TGG + chr4_2:6800806-6800825 None:intergenic 40.0%
AGGGGTCGATGAAGAAAATT+TGG + chr4_2:6801127-6801146 None:intergenic 40.0%
! AATTTTCTTCATCGACCCCT+CGG - chr4_2:6801127-6801146 Msa0585720:intron 40.0%
TGGAGGAAATGAGGATCAAA+AGG + chr4_2:6801245-6801264 None:intergenic 40.0%
! AACCGACATTGATTGAAGGT+AGG - chr4_2:6801269-6801288 Msa0585720:intron 40.0%
GACCTACCTTCAATCAATGT+CGG + chr4_2:6801274-6801293 None:intergenic 40.0%
TCTTCTGATTGGAAACATGC+AGG + chr4_2:6801390-6801409 None:intergenic 40.0%
ATGGAAAACAAAACCTCTCC+AGG - chr4_2:6801443-6801462 Msa0585720:intron 40.0%
TGGAAAACAAAACCTCTCCA+GGG - chr4_2:6801444-6801463 Msa0585720:intron 40.0%
TTTCACAGTACACTTGGTCA+GGG + chr4_2:6801488-6801507 None:intergenic 40.0%
! TTTTCACAGTACACTTGGTC+AGG + chr4_2:6801489-6801508 None:intergenic 40.0%
TGAAGATCAGACACACGATA+TGG - chr4_2:6801694-6801713 Msa0585720:intron 40.0%
GAAGATCAGACACACGATAT+GGG - chr4_2:6801695-6801714 Msa0585720:intron 40.0%
ATATACCAGGGTATGACAGT+TGG + chr4_2:6802053-6802072 None:intergenic 40.0%
! GTGTTGTGTGGCACTGAAAT+TGG + chr4_2:6794180-6794199 Msa0585710:CDS 45.0%
AGATGACATAGCCATAGCCA+TGG + chr4_2:6794219-6794238 Msa0585710:CDS 45.0%
GGAAGAAAAGTGAGGTTGTG+AGG + chr4_2:6794245-6794264 Msa0585710:CDS 45.0%
TCTTCATCAGAGCCAAATCG+TGG - chr4_2:6794374-6794393 Msa0585720:three_prime_UTR 45.0%
CGTGGTTTCGATCCTAAATC+AGG - chr4_2:6794392-6794411 Msa0585720:intron 45.0%
CAAGAACGTTGCGTTTAGGA+CGG + chr4_2:6795535-6795554 Msa0585710:CDS 45.0%
AGAGCAAGAACGTTGCGTTT+AGG + chr4_2:6795539-6795558 Msa0585710:CDS 45.0%
GAAGAAATGTTGCTGGGCAA+GGG + chr4_2:6795764-6795783 Msa0585710:CDS 45.0%
TGAAGAAATGTTGCTGGGCA+AGG + chr4_2:6795765-6795784 Msa0585710:CDS 45.0%
! TCGCATGCCTTTGTTTACCA+TGG - chr4_2:6795965-6795984 Msa0585720:three_prime_UTR 45.0%
CTCCGAGATGTCACTAGATT+TGG - chr4_2:6796404-6796423 Msa0585720:three_prime_UTR 45.0%
! AGCTGCTTTGAACAACTGAG+AGG + chr4_2:6796474-6796493 None:intergenic 45.0%
TCAGTTGTTCAAAGCAGCTC+TGG - chr4_2:6796475-6796494 Msa0585720:three_prime_UTR 45.0%
TCCTTAGATGATATCCCTGC+AGG - chr4_2:6796708-6796727 Msa0585720:three_prime_UTR 45.0%
TCCTGCAGGGATATCATCTA+AGG + chr4_2:6796712-6796731 None:intergenic 45.0%
! GAATGAAGGTTAGCTCTTGC+GGG - chr4_2:6796791-6796810 Msa0585720:intron 45.0%
! TTCTTAGAAGTGCAGGTCGT+TGG - chr4_2:6796967-6796986 Msa0585720:intron 45.0%
ATGGTGCCTCTGCCATTAAA+AGG - chr4_2:6797070-6797089 Msa0585720:intron 45.0%
ACTCACTCTTAGCTCCTGAT+TGG - chr4_2:6797323-6797342 Msa0585720:CDS 45.0%
CTCACTCTTAGCTCCTGATT+GGG - chr4_2:6797324-6797343 Msa0585720:CDS 45.0%
TCACTCTTAGCTCCTGATTG+GGG - chr4_2:6797325-6797344 Msa0585720:CDS 45.0%
!! TTAGCTTGTACACCCCAATC+AGG + chr4_2:6797340-6797359 None:intergenic 45.0%
GAACACCTGAGGAACAAAAG+AGG - chr4_2:6797415-6797434 Msa0585720:intron 45.0%
!! AGTGCTGATTTAGGCCTTCT+AGG - chr4_2:6797971-6797990 Msa0585720:intron 45.0%
CGGTATTGCAAATCTTTGGG+TGG + chr4_2:6798001-6798020 None:intergenic 45.0%
CTGATCCGAATGTAGAACAC+TGG + chr4_2:6798043-6798062 None:intergenic 45.0%
ATATAGCTGTACCAGGGTAC+TGG + chr4_2:6798239-6798258 None:intergenic 45.0%
! AGCTATCTGGTGTTAACTGC+TGG + chr4_2:6798814-6798833 None:intergenic 45.0%
TCATAAATCGTTCAGGTCCC+TGG - chr4_2:6798909-6798928 Msa0585720:intron 45.0%
GTGATGCTTAAGCAAACCGA+TGG - chr4_2:6798935-6798954 Msa0585720:intron 45.0%
GAAGAATTGTTGAGGGTCCT+TGG - chr4_2:6799096-6799115 Msa0585720:intron 45.0%
CTTGGACTTCAAGAAGAGGA+GGG - chr4_2:6799114-6799133 Msa0585720:intron 45.0%
TGATATTGCAGTCAAGCACG+TGG - chr4_2:6799480-6799499 Msa0585720:intron 45.0%
!! TGGAAGTATCATCTGCATGG+CGG - chr4_2:6799522-6799541 Msa0585720:CDS 45.0%
CCTCTAGCAATGTTCTACTC+AGG + chr4_2:6799549-6799568 None:intergenic 45.0%
CCTGAGTAGAACATTGCTAG+AGG - chr4_2:6799546-6799565 Msa0585720:CDS 45.0%
GAGTAGAACATTGCTAGAGG+AGG - chr4_2:6799549-6799568 Msa0585720:CDS 45.0%
GTATTTGTCAGCTGCAGTGT+TGG + chr4_2:6800112-6800131 None:intergenic 45.0%
! AGCACTGAAATCAGGTTCTG+AGG - chr4_2:6800247-6800266 Msa0585720:intron 45.0%
! GCACTGAAATCAGGTTCTGA+GGG - chr4_2:6800248-6800267 Msa0585720:intron 45.0%
!! AAATCAGGTTCTGAGGGCTT+TGG - chr4_2:6800254-6800273 Msa0585720:intron 45.0%
!! AATCAGGTTCTGAGGGCTTT+GGG - chr4_2:6800255-6800274 Msa0585720:intron 45.0%
TTCACCAGCTCTCTTGAACT+TGG - chr4_2:6800281-6800300 Msa0585720:intron 45.0%
AGTACCAAGTTCAAGAGAGC+TGG + chr4_2:6800288-6800307 None:intergenic 45.0%
! TTTGACGAACTTTGAGGACC+CGG - chr4_2:6800374-6800393 Msa0585720:intron 45.0%
GGGAAGTGATGATTCTGCAA+GGG + chr4_2:6800408-6800427 None:intergenic 45.0%
CTTGCAGAATCATCACTTCC+CGG - chr4_2:6800407-6800426 Msa0585720:intron 45.0%
TTGCAGAATCATCACTTCCC+GGG - chr4_2:6800408-6800427 Msa0585720:intron 45.0%
!! CTGCATGGAGGAAGCATTTA+AGG + chr4_2:6800478-6800497 None:intergenic 45.0%
!! GGCATTTGCTTTAGAAGCAG+AGG + chr4_2:6800612-6800631 None:intergenic 45.0%
GAAAGCTATGAGTGAGGTAG+AGG + chr4_2:6800633-6800652 None:intergenic 45.0%
AACCGTGAAAGCTATGAGTG+AGG + chr4_2:6800639-6800658 None:intergenic 45.0%
AGAGTTGCTAACATGGGCAT+TGG + chr4_2:6800699-6800718 None:intergenic 45.0%
GTGGTGAAGAGTTGCTAACA+TGG + chr4_2:6800706-6800725 None:intergenic 45.0%
AGAAGTGGCTTCTTCAACAG+AGG + chr4_2:6800752-6800771 None:intergenic 45.0%
!! ACTACAGATGGTGGAAGAAG+TGG + chr4_2:6800767-6800786 None:intergenic 45.0%
!! GAGAGTGTTACTACAGATGG+TGG + chr4_2:6800776-6800795 None:intergenic 45.0%
TCGTCCATGTTAGCAAAGAG+AGG - chr4_2:6800914-6800933 Msa0585720:intron 45.0%
GGTTCCTCTCTTTGCTAACA+TGG + chr4_2:6800921-6800940 None:intergenic 45.0%
! ATTTTCTTCATCGACCCCTC+GGG - chr4_2:6801128-6801147 Msa0585720:intron 45.0%
GGGTGTTCAACCACTTGTAT+TGG - chr4_2:6801148-6801167 Msa0585720:intron 45.0%
!! TCAATCAATGTCGGTTCGTC+TGG + chr4_2:6801265-6801284 None:intergenic 45.0%
! GACGAACCGACATTGATTGA+AGG - chr4_2:6801265-6801284 Msa0585720:intron 45.0%
GTGCTCTTTGCTCTTCTGAT+TGG + chr4_2:6801401-6801420 None:intergenic 45.0%
AAACAAAACCTCTCCAGGGT+AGG - chr4_2:6801448-6801467 Msa0585720:intron 45.0%
TTCACAGTACACTTGGTCAG+GGG + chr4_2:6801487-6801506 None:intergenic 45.0%
GGTGGGGACTTCAGAATTTA+AGG + chr4_2:6801885-6801904 None:intergenic 45.0%
TTTCTCCAACTGTCATACCC+TGG - chr4_2:6802045-6802064 Msa0585720:CDS 45.0%
TGTTGCGGTTGTTGAGTGTG+AGG - chr4_2:6794981-6795000 Msa0585720:intron 50.0%
! TGCTTGCGGCTTTTATGTGC+TGG - chr4_2:6795694-6795713 Msa0585720:three_prime_UTR 50.0%
! GCTTGCGGCTTTTATGTGCT+GGG - chr4_2:6795695-6795714 Msa0585720:three_prime_UTR 50.0%
GTTCCTGGGGTTATGTATGC+AGG - chr4_2:6795738-6795757 Msa0585720:three_prime_UTR 50.0%
! TGAGAGGCTCGAAGCTTTTC+TGG + chr4_2:6796458-6796477 None:intergenic 50.0%
! GGTTAGCTCTTGCGGGAAAA+TGG - chr4_2:6796798-6796817 Msa0585720:intron 50.0%
! AGCTCCCTCTTTTGTTCCTC+AGG + chr4_2:6797423-6797442 None:intergenic 50.0%
GGAACAAAAGAGGGAGCTAC+CGG - chr4_2:6797425-6797444 Msa0585720:intron 50.0%
! GGGATAGGGATCAAGTTGTG+TGG + chr4_2:6797597-6797616 None:intergenic 50.0%
TTACTGCGGTCACTGGGATA+GGG + chr4_2:6797611-6797630 None:intergenic 50.0%
TTTACTGCGGTCACTGGGAT+AGG + chr4_2:6797612-6797631 None:intergenic 50.0%
TGCTTAAGCATCACCTGCCA+GGG + chr4_2:6798929-6798948 None:intergenic 50.0%
TTGCTTAAGCATCACCTGCC+AGG + chr4_2:6798930-6798949 None:intergenic 50.0%
GGTCCTTGGACTTCAAGAAG+AGG - chr4_2:6799110-6799129 Msa0585720:intron 50.0%
CCTCCTCTTCTTGAAGTCCA+AGG + chr4_2:6799116-6799135 None:intergenic 50.0%
CCTTGGACTTCAAGAAGAGG+AGG - chr4_2:6799113-6799132 Msa0585720:intron 50.0%
AAGATGCAGTGCAGAACCAC+AGG + chr4_2:6799291-6799310 None:intergenic 50.0%
TATTGCAGTCAAGCACGTGG+TGG - chr4_2:6799483-6799502 Msa0585720:CDS 50.0%
ATTGCAGTCAAGCACGTGGT+GGG - chr4_2:6799484-6799503 Msa0585720:CDS 50.0%
ATGCTGAAGGACAATCGCAG+CGG - chr4_2:6800159-6800178 Msa0585720:intron 50.0%
!! CGGTTTGCTGCTAATCTTCG+TGG + chr4_2:6800323-6800342 None:intergenic 50.0%
! TGATGATTCTGCAAGGGCGT+TGG + chr4_2:6800402-6800421 None:intergenic 50.0%
CGGGAAGTGATGATTCTGCA+AGG + chr4_2:6800409-6800428 None:intergenic 50.0%
! TTTAAGGCGAAGGCGAAGGA+AGG + chr4_2:6800462-6800481 None:intergenic 50.0%
! AGCATTTAAGGCGAAGGCGA+AGG + chr4_2:6800466-6800485 None:intergenic 50.0%
!! GGAGGAAGCATTTAAGGCGA+AGG + chr4_2:6800472-6800491 None:intergenic 50.0%
!!! GGCAAGCTTGCTGCAGATTT+TGG - chr4_2:6800671-6800690 Msa0585720:intron 50.0%
ACAAGTGGTTGAACACCCGA+GGG + chr4_2:6801146-6801165 None:intergenic 50.0%
TACAAGTGGTTGAACACCCG+AGG + chr4_2:6801147-6801166 None:intergenic 50.0%
GACGCTACGACCAATACAAG+TGG + chr4_2:6801161-6801180 None:intergenic 50.0%
AGCGTCTGACTCTTTCCCTT+AGG - chr4_2:6801175-6801194 Msa0585720:intron 50.0%
CTGACTCTTTCCCTTAGGTC+CGG - chr4_2:6801180-6801199 Msa0585720:intron 50.0%
!! ATCAATGTCGGTTCGTCTGG+AGG + chr4_2:6801262-6801281 None:intergenic 50.0%
CTTCTGACTAGTACCTACCC+TGG + chr4_2:6801464-6801483 None:intergenic 50.0%
! CGTTGCGTTTAGGACGGAGA+GGG + chr4_2:6795529-6795548 Msa0585710:CDS 55.0%
! ACGTTGCGTTTAGGACGGAG+AGG + chr4_2:6795530-6795549 Msa0585710:CDS 55.0%
TGATATCCCTGCAGGACCTG+TGG - chr4_2:6796716-6796735 Msa0585720:exon 55.0%
ATGAAGCCACAGGTCCTGCA+GGG + chr4_2:6796725-6796744 None:intergenic 55.0%
AATGAAGCCACAGGTCCTGC+AGG + chr4_2:6796726-6796745 None:intergenic 55.0%
CTTTGGGTGGGAAGCCTAGA+AGG + chr4_2:6797988-6798007 None:intergenic 55.0%
AAATCGTTCAGGTCCCTGGC+AGG - chr4_2:6798913-6798932 Msa0585720:intron 55.0%
AGTGCAACTCGCTTCACCCT+TGG - chr4_2:6798980-6798999 Msa0585720:intron 55.0%
!! TTCTGCAAGGGCGTTGGTTC+CGG + chr4_2:6800396-6800415 None:intergenic 55.0%
CAAGTGGTTGAACACCCGAG+GGG + chr4_2:6801145-6801164 None:intergenic 55.0%
ACTCTTTCCCTTAGGTCCGG+AGG - chr4_2:6801183-6801202 Msa0585720:intron 55.0%
CTTGCTTCCTCCGGACCTAA+GGG + chr4_2:6801193-6801212 None:intergenic 55.0%
GCATCATCGCTTGCTTCCTC+CGG + chr4_2:6801202-6801221 None:intergenic 55.0%
GCGATGATGCATCCACTGCT+CGG - chr4_2:6801212-6801231 Msa0585720:intron 55.0%
CGGTTCGTCTGGAGGAAATG+AGG + chr4_2:6801254-6801273 None:intergenic 55.0%
GACTAGTACCTACCCTGGAG+AGG + chr4_2:6801459-6801478 None:intergenic 55.0%
TGGGCACATGCACCTCTACA+TGG - chr4_2:6801714-6801733 Msa0585720:intron 55.0%
GGGCCTGCATACATAACCCC+AGG + chr4_2:6795744-6795763 Msa0585710:CDS 60.0%
GCTGTGTTTCGCCAGTACCC+TGG - chr4_2:6798225-6798244 Msa0585720:CDS 60.0%
!! TCTGCAAGGGCGTTGGTTCC+GGG + chr4_2:6800395-6800414 None:intergenic 60.0%
AAGGCGAAGGCGAAGGAAGG+AGG + chr4_2:6800459-6800478 None:intergenic 60.0%
GCTTGCTTCCTCCGGACCTA+AGG + chr4_2:6801194-6801213 None:intergenic 60.0%
! AAAGGCGTGACTCCGAGCAG+TGG + chr4_2:6801227-6801246 None:intergenic 60.0%
GACAATCGCAGCGGCAGCAG+TGG - chr4_2:6800168-6800187 Msa0585720:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 6794151 6802128 6794151 ID=Msa0585720;Name=Msa0585720
chr4_2 mRNA 6794151 6802128 6794151 ID=Msa0585720-mRNA-1;Parent=Msa0585720;Name=Msa0585720-mRNA-1;_AED=0.18;_eAED=0.18;_QI=55|1|1|1|0.78|0.73|15|1984|382
chr4_2 exon 6794151 6794394 6794151 ID=Msa0585720-mRNA-1:exon:1714;Parent=Msa0585720-mRNA-1
chr4_2 exon 6794778 6794889 6794778 ID=Msa0585720-mRNA-1:exon:1713;Parent=Msa0585720-mRNA-1
chr4_2 exon 6794985 6795223 6794985 ID=Msa0585720-mRNA-1:exon:1712;Parent=Msa0585720-mRNA-1
chr4_2 exon 6795340 6796788 6795340 ID=Msa0585720-mRNA-1:exon:1711;Parent=Msa0585720-mRNA-1
chr4_2 exon 6797109 6797189 6797109 ID=Msa0585720-mRNA-1:exon:1710;Parent=Msa0585720-mRNA-1
chr4_2 exon 6797273 6797355 6797273 ID=Msa0585720-mRNA-1:exon:1709;Parent=Msa0585720-mRNA-1
chr4_2 exon 6798033 6798093 6798033 ID=Msa0585720-mRNA-1:exon:1708;Parent=Msa0585720-mRNA-1
chr4_2 exon 6798204 6798306 6798204 ID=Msa0585720-mRNA-1:exon:1707;Parent=Msa0585720-mRNA-1
chr4_2 exon 6798412 6798470 6798412 ID=Msa0585720-mRNA-1:exon:1706;Parent=Msa0585720-mRNA-1
chr4_2 exon 6799212 6799297 6799212 ID=Msa0585720-mRNA-1:exon:1705;Parent=Msa0585720-mRNA-1
chr4_2 exon 6799481 6799592 6799481 ID=Msa0585720-mRNA-1:exon:1704;Parent=Msa0585720-mRNA-1
chr4_2 exon 6799777 6799839 6799777 ID=Msa0585720-mRNA-1:exon:1703;Parent=Msa0585720-mRNA-1
chr4_2 exon 6799956 6800048 6799956 ID=Msa0585720-mRNA-1:exon:1702;Parent=Msa0585720-mRNA-1
chr4_2 exon 6800489 6800519 6800489 ID=Msa0585720-mRNA-1:exon:1701;Parent=Msa0585720-mRNA-1
chr4_2 exon 6801757 6802128 6801757 ID=Msa0585720-mRNA-1:exon:1700;Parent=Msa0585720-mRNA-1
chr4_2 five_prime_UTR 6802074 6802128 6802074 ID=Msa0585720-mRNA-1:five_prime_utr;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6801757 6802073 6801757 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6800489 6800519 6800489 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6799956 6800048 6799956 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6799777 6799839 6799777 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6799481 6799592 6799481 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6799212 6799297 6799212 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6798412 6798470 6798412 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6798204 6798306 6798204 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6798033 6798093 6798033 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6797273 6797355 6797273 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6797109 6797189 6797109 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 CDS 6796729 6796788 6796729 ID=Msa0585720-mRNA-1:cds;Parent=Msa0585720-mRNA-1
chr4_2 three_prime_UTR 6795340 6796728 6795340 ID=Msa0585720-mRNA-1:three_prime_utr;Parent=Msa0585720-mRNA-1
chr4_2 three_prime_UTR 6794985 6795223 6794985 ID=Msa0585720-mRNA-1:three_prime_utr;Parent=Msa0585720-mRNA-1
chr4_2 three_prime_UTR 6794778 6794889 6794778 ID=Msa0585720-mRNA-1:three_prime_utr;Parent=Msa0585720-mRNA-1
chr4_2 three_prime_UTR 6794151 6794394 6794151 ID=Msa0585720-mRNA-1:three_prime_utr;Parent=Msa0585720-mRNA-1
Gene Sequence

>Msa0585720

ATGCTACTATCCATGGCTATGGCTATGTCATCTCTGCCTCACAACCTCACTTTTCTTCCTTCACATCTTTCTCCACTATCTTCTTCACCTTCTTCAATTTCTACTACTAAATCTCTTCGAAACACTTCTTTATTCAAAATCAAATGCATTAAAACCGAAAAAGAAGCTTCTTCATCAGAGCCAAATCGTGGTTTCGATCCTAAATCAGGTGTATCTGTTTACAAACCTAAGTCTTATGAAGTTCTCGCTACTGATGCTGCTAATTCACTCAATTTTGCTCTTCAAGATGGAAAACTGAGACTCGAAATCGATTTCCCGCCCTTGCCCAGCAACATTTCTTCATATAAGGGATCTTCAGATGATTTCATCGATGCCAACATTCAACTTGTCTTGGCTGTTGTAAAAAAGCTACAGGAGAAAAAAGAGACCAGAGCTTGCATAGTATTCCCTGATAAACCAGAAAAGCTTCGAGCCTCTCAGTTGTTCAAAGCAGCTCTGGATTCAGTTGATGGCCTTACTATAGGCTCCTTAGATGATATCCCTGCAGGACCTGTGGCTTCATTTTTCAGATCTGTTAGAAACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGGTCGTTGGCAGTCAAGTGAACCTCCATCGCTCTACATATTCATTAATAGCAGTACACGTGAACTTGGTTATATTGAGAAGTATGTGGAAAAATTTGCTCCATCAACCCCAACACTTTTATTTAATCTTGAGCTAGATACACTACGTGCTGATTTAGGCCTTCTAGGCTTCCCACCCAAAGATTTGCAATACCGCTTTCTTTCTCAATTTACTCCAGTGTTCTACATTCGGATCAGAGATTATTCAAAGACAGTTGCAGTAGCACCTTATATTGTCAATTACAGTGGAGCTGTGTTTCGCCAGTACCCTGGTCCCTGGCAGGTGATGCTTAAGCAAACCGATGGTTCTTATGCTTGTGTAGCAGAAAGTGCAACTCGCTTCACCCTTGGTGAAGCCAAAGAAGAATTGTTGAGGGTCCTTGGACTTCAAGAAGAGGAGGGAAGCTCTCTAGAATTTCTACGAAGAGGCTATAGGTCAAGCACGTGGTGGGAAGAAGATTCTGATTTGGAAGTATCATCTGCATGGCGGACCTGA

Protein sequence

>Msa0585720

MLLSMAMAMSSLPHNLTFLPSHLSPLSSSPSSISTTKSLRNTSLFKIKCIKTEKEASSSEPNRGFDPKSGVSVYKPKSYEVLATDAANSLNFALQDGKLRLEIDFPPLPSNISSYKGSSDDFIDANIQLVLAVVKKLQEKKETRACIVFPDKPEKLRASQLFKAALDSVDGLTIGSLDDIPAGPVASFFRSVRNTLDFDFEDENEGRWQSSEPPSLYIFINSSTRELGYIEKYVEKFAPSTPTLLFNLELDTLRADLGLLGFPPKDLQYRFLSQFTPVFYIRIRDYSKTVAVAPYIVNYSGAVFRQYPGPWQVMLKQTDGSYACVAESATRFTLGEAKEELLRVLGLQEEEGSSLEFLRRGYRSSTWWEEDSDLEVSSAWRT*