Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225530 | RHN76407.1 | 91.246 | 297 | 26 | 0 | 1 | 297 | 140 | 436 | 0.0 | 537 |
| Msa0225530 | RHN76407.1 | 92.537 | 67 | 5 | 0 | 216 | 282 | 17 | 83 | 1.04e-30 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225530 | sp|Q9CA93|BAC2_ARATH | 59.732 | 298 | 107 | 4 | 1 | 297 | 1 | 286 | 4.72e-110 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225530 | A0A396JMZ9 | 91.246 | 297 | 26 | 0 | 1 | 297 | 140 | 436 | 0.0 | 537 |
| Msa0225530 | A0A396JMZ9 | 92.537 | 67 | 5 | 0 | 216 | 282 | 17 | 83 | 4.99e-31 | 130 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0225530 | 0.815673 | 8.195693e-52 | -8.615850e-47 |
| Msa0014970 | Msa0225530 | 0.819366 | 1.205982e-52 | -8.615850e-47 |
| Msa0053260 | Msa0225530 | 0.814898 | 1.218704e-51 | -8.615850e-47 |
| Msa0053360 | Msa0225530 | 0.801496 | 8.759103e-49 | -8.615850e-47 |
| Msa0074860 | Msa0225530 | 0.804890 | 1.738420e-49 | -8.615850e-47 |
| Msa0098750 | Msa0225530 | 0.813455 | 2.537753e-51 | -8.615850e-47 |
| Msa0108500 | Msa0225530 | 0.827499 | 1.512232e-54 | -8.615850e-47 |
| Msa0127910 | Msa0225530 | 0.812168 | 4.856874e-51 | -8.615850e-47 |
| Msa0138340 | Msa0225530 | 0.813818 | 2.111278e-51 | -8.615850e-47 |
| Msa0147960 | Msa0225530 | 0.816542 | 5.240210e-52 | -8.615850e-47 |
| Msa0159240 | Msa0225530 | 0.804352 | 2.250786e-49 | -8.615850e-47 |
| Msa0164580 | Msa0225530 | 0.800455 | 1.429742e-48 | -8.615850e-47 |
| Msa0174060 | Msa0225530 | 0.800920 | 1.149077e-48 | -8.615850e-47 |
| Msa0194750 | Msa0225530 | 0.808658 | 2.779927e-50 | -8.615850e-47 |
| Msa0225530 | Msa0232170 | 0.807830 | 4.172323e-50 | -8.615850e-47 |
| Msa0225530 | Msa0297270 | 0.810551 | 1.089691e-50 | -8.615850e-47 |
| Msa0225530 | Msa0310260 | 0.806333 | 8.657010e-50 | -8.615850e-47 |
| Msa0225530 | Msa0351600 | 0.810494 | 1.121178e-50 | -8.615850e-47 |
| Msa0225530 | Msa0368620 | -0.804339 | 2.265309e-49 | -8.615850e-47 |
| Msa0225530 | Msa0387630 | 0.805875 | 1.080503e-49 | -8.615850e-47 |
| Msa0225530 | Msa0389710 | -0.800987 | 1.113713e-48 | -8.615850e-47 |
| Msa0225530 | Msa0390590 | 0.810663 | 1.030599e-50 | -8.615850e-47 |
| Msa0225530 | Msa0483090 | 0.805280 | 1.440762e-49 | -8.615850e-47 |
| Msa0225530 | Msa0527210 | 0.812913 | 3.337492e-51 | -8.615850e-47 |
| Msa0225530 | Msa0538050 | 0.803913 | 2.778347e-49 | -8.615850e-47 |
| Msa0225530 | Msa0550820 | 0.806191 | 9.275037e-50 | -8.615850e-47 |
| Msa0225530 | Msa0563230 | 0.833293 | 5.797084e-56 | -8.615850e-47 |
| Msa0225530 | Msa0585720 | 0.817321 | 3.502997e-52 | -8.615850e-47 |
| Msa0225530 | Msa0617470 | 0.819969 | 8.785457e-53 | -8.615850e-47 |
| Msa0225530 | Msa0621670 | 0.802648 | 5.078318e-49 | -8.615850e-47 |
| Msa0225530 | Msa0625900 | 0.800879 | 1.171671e-48 | -8.615850e-47 |
| Msa0225530 | Msa0638300 | 0.801028 | 1.092282e-48 | -8.615850e-47 |
| Msa0225530 | Msa0654570 | 0.800830 | 1.199006e-48 | -8.615850e-47 |
| Msa0225530 | Msa0663580 | 0.820643 | 6.155615e-53 | -8.615850e-47 |
| Msa0225530 | Msa0663690 | 0.804241 | 2.374382e-49 | -8.615850e-47 |
| Msa0225530 | Msa0677140 | 0.802301 | 5.985995e-49 | -8.615850e-47 |
| Msa0225530 | Msa0700250 | 0.819976 | 8.750154e-53 | -8.615850e-47 |
| Msa0225530 | Msa0702020 | 0.809093 | 2.243012e-50 | -8.615850e-47 |
| Msa0225530 | Msa0742690 | 0.800091 | 1.695761e-48 | -8.615850e-47 |
| Msa0225530 | Msa0750490 | 0.822498 | 2.294409e-53 | -8.615850e-47 |
| Msa0225530 | Msa0779830 | 0.806024 | 1.005271e-49 | -8.615850e-47 |
| Msa0225530 | Msa0827560 | 0.801404 | 9.147916e-49 | -8.615850e-47 |
| Msa0225530 | Msa0869320 | 0.807879 | 4.074593e-50 | -8.615850e-47 |
| Msa0225530 | Msa0934290 | 0.811194 | 7.910357e-51 | -8.615850e-47 |
| Msa0225530 | Msa0947550 | 0.808184 | 3.507548e-50 | -8.615850e-47 |
| Msa0225530 | Msa0971780 | 0.806937 | 6.454777e-50 | -8.615850e-47 |
| Msa0225530 | Msa1025440 | 0.803101 | 4.093760e-49 | -8.615850e-47 |
| Msa0225530 | Msa1129120 | 0.810362 | 1.197308e-50 | -8.615850e-47 |
| Msa0225530 | Msa1147600 | 0.804528 | 2.068806e-49 | -8.615850e-47 |
| Msa0225530 | Msa1156120 | 0.803105 | 4.085478e-49 | -8.615850e-47 |
| Msa0225530 | Msa1194480 | 0.817413 | 3.340339e-52 | -8.615850e-47 |
| Msa0225530 | Msa1235960 | 0.802631 | 5.120025e-49 | -8.615850e-47 |
| Msa0225530 | Msa1235990 | 0.805847 | 1.095263e-49 | -8.615850e-47 |
| Msa0225530 | Msa1236120 | 0.801838 | 7.453713e-49 | -8.615850e-47 |
| Msa0225530 | Msa1236190 | 0.815262 | 1.011748e-51 | -8.615850e-47 |
| Msa0225530 | Msa1251500 | -0.811090 | 8.329391e-51 | -8.615850e-47 |
| Msa0225530 | Msa1251950 | 0.819836 | 9.423383e-53 | -8.615850e-47 |
| Msa0225530 | Msa1279250 | 0.802594 | 5.210604e-49 | -8.615850e-47 |
| Msa0225530 | Msa1292140 | -0.807734 | 4.374049e-50 | -8.615850e-47 |
| Msa0225530 | Msa1316090 | 0.812550 | 4.007583e-51 | -8.615850e-47 |
| Msa0225530 | Msa1320660 | 0.805302 | 1.425352e-49 | -8.615850e-47 |
| Msa0225530 | Msa1328680 | 0.804139 | 2.493698e-49 | -8.615850e-47 |
| Msa0225530 | Msa1371540 | 0.817227 | 3.679543e-52 | -8.615850e-47 |
| Msa0225530 | Msa1372470 | 0.802743 | 4.854386e-49 | -8.615850e-47 |
| Msa0225530 | Msa1373310 | 0.819319 | 1.236058e-52 | -8.615850e-47 |
| Msa0225530 | Msa1373570 | 0.804655 | 1.946045e-49 | -8.615850e-47 |
| Msa0225530 | Msa1381870 | 0.800901 | 1.159451e-48 | -8.615850e-47 |
| Msa0225530 | Msa1388720 | 0.812009 | 5.258341e-51 | -8.615850e-47 |
| Msa0225530 | Msa1392570 | 0.805607 | 1.230499e-49 | -8.615850e-47 |
| Msa0225530 | Msa1397190 | 0.976729 | 2.191000e-142 | -8.615850e-47 |
| Msa0225530 | Msa1401210 | 0.961176 | 2.122370e-119 | -8.615850e-47 |
| Msa0225530 | Msa1412800 | 0.807587 | 4.699732e-50 | -8.615850e-47 |
| Msa0225530 | Msa1432730 | 0.809714 | 1.650639e-50 | -8.615850e-47 |
| Msa0225530 | Msa1434850 | 0.806380 | 8.461212e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225530 | MtrunA17_Chr2g0331771 | 91.246 | 297 | 26 | 0 | 1 | 297 | 140 | 436 | 0.0 | 537 |
| Msa0225530 | MtrunA17_Chr2g0331771 | 92.537 | 67 | 5 | 0 | 216 | 282 | 17 | 83 | 9.61e-35 | 130 |
| Msa0225530 | MtrunA17_Chr4g0004571 | 62.081 | 298 | 109 | 4 | 1 | 297 | 1 | 295 | 5.67e-135 | 384 |
| Msa0225530 | MtrunA17_Chr8g0366791 | 36.213 | 301 | 173 | 6 | 9 | 294 | 1 | 297 | 3.86e-47 | 160 |
| Msa0225530 | MtrunA17_Chr5g0411411 | 33.887 | 301 | 180 | 6 | 9 | 294 | 1 | 297 | 1.76e-44 | 153 |
| Msa0225530 | MtrunA17_Chr4g0046981 | 28.328 | 293 | 195 | 5 | 15 | 294 | 10 | 300 | 1.58e-28 | 111 |
| Msa0225530 | MtrunA17_Chr8g0385571 | 29.242 | 277 | 188 | 4 | 15 | 288 | 225 | 496 | 5.04e-27 | 110 |
| Msa0225530 | MtrunA17_Chr8g0385571 | 29.688 | 192 | 118 | 7 | 14 | 196 | 319 | 502 | 8.13e-15 | 74.3 |
| Msa0225530 | MtrunA17_Chr3g0131501 | 26.429 | 280 | 198 | 4 | 12 | 288 | 200 | 474 | 1.05e-23 | 100 |
| Msa0225530 | MtrunA17_Chr3g0131501 | 28.814 | 177 | 116 | 3 | 93 | 269 | 190 | 356 | 1.15e-13 | 70.9 |
| Msa0225530 | MtrunA17_Chr4g0028531 | 31.734 | 271 | 163 | 9 | 18 | 275 | 23 | 284 | 3.98e-23 | 97.1 |
| Msa0225530 | MtrunA17_Chr1g0201361 | 30.038 | 263 | 148 | 9 | 18 | 274 | 52 | 284 | 5.69e-23 | 96.3 |
| Msa0225530 | MtrunA17_Chr6g0463351 | 29.286 | 280 | 140 | 8 | 32 | 286 | 82 | 328 | 4.56e-22 | 94.7 |
| Msa0225530 | MtrunA17_Chr7g0252401 | 27.083 | 288 | 189 | 7 | 15 | 294 | 205 | 479 | 5.36e-22 | 95.5 |
| Msa0225530 | MtrunA17_Chr7g0252401 | 23.232 | 198 | 136 | 5 | 5 | 196 | 292 | 479 | 8.00e-12 | 65.5 |
| Msa0225530 | MtrunA17_Chr1g0196921 | 23.735 | 257 | 180 | 5 | 30 | 275 | 27 | 278 | 1.38e-20 | 89.7 |
| Msa0225530 | MtrunA17_Chr1g0196921 | 27.976 | 168 | 111 | 3 | 126 | 288 | 30 | 192 | 7.52e-13 | 67.8 |
| Msa0225530 | MtrunA17_Chr3g0137941 | 30.270 | 185 | 117 | 3 | 104 | 288 | 117 | 289 | 9.41e-20 | 88.6 |
| Msa0225530 | MtrunA17_Chr3g0137941 | 23.077 | 286 | 208 | 5 | 15 | 297 | 120 | 396 | 4.01e-15 | 75.1 |
| Msa0225530 | MtrunA17_Chr7g0240341 | 33.511 | 188 | 115 | 5 | 112 | 292 | 28 | 212 | 1.35e-19 | 87.0 |
| Msa0225530 | MtrunA17_Chr7g0240341 | 24.453 | 274 | 179 | 8 | 16 | 269 | 24 | 289 | 1.13e-13 | 70.5 |
| Msa0225530 | MtrunA17_Chr8g0383321 | 29.433 | 282 | 164 | 10 | 23 | 297 | 55 | 308 | 1.38e-19 | 87.0 |
| Msa0225530 | MtrunA17_Chr8g0386871 | 29.893 | 281 | 160 | 10 | 23 | 288 | 323 | 581 | 3.81e-19 | 87.4 |
| Msa0225530 | MtrunA17_Chr1g0149111 | 29.213 | 178 | 115 | 2 | 111 | 288 | 140 | 306 | 6.00e-19 | 86.3 |
| Msa0225530 | MtrunA17_Chr1g0149111 | 25.338 | 296 | 197 | 9 | 9 | 295 | 131 | 411 | 1.58e-14 | 73.6 |
| Msa0225530 | MtrunA17_Chr3g0135861 | 25.253 | 297 | 195 | 7 | 15 | 289 | 33 | 324 | 1.28e-18 | 84.7 |
| Msa0225530 | MtrunA17_Chr4g0063561 | 28.902 | 173 | 112 | 4 | 102 | 274 | 116 | 277 | 5.29e-18 | 83.6 |
| Msa0225530 | MtrunA17_Chr4g0063561 | 23.509 | 285 | 208 | 4 | 15 | 297 | 121 | 397 | 2.55e-16 | 78.6 |
| Msa0225530 | MtrunA17_Chr7g0269701 | 34.826 | 201 | 119 | 5 | 97 | 288 | 3 | 200 | 9.52e-18 | 82.0 |
| Msa0225530 | MtrunA17_Chr7g0269701 | 26.990 | 289 | 193 | 8 | 23 | 297 | 25 | 309 | 6.97e-17 | 79.3 |
| Msa0225530 | MtrunA17_Chr6g0455381 | 23.232 | 297 | 202 | 8 | 19 | 297 | 21 | 309 | 1.50e-17 | 81.6 |
| Msa0225530 | MtrunA17_Chr6g0455381 | 29.101 | 189 | 120 | 7 | 114 | 294 | 19 | 201 | 1.22e-13 | 70.1 |
| Msa0225530 | MtrunA17_Chr6g0455381 | 29.885 | 174 | 97 | 7 | 18 | 172 | 115 | 282 | 4.06e-11 | 62.8 |
| Msa0225530 | MtrunA17_Chr4g0008061 | 24.818 | 274 | 179 | 7 | 12 | 269 | 10 | 272 | 3.83e-17 | 80.1 |
| Msa0225530 | MtrunA17_Chr4g0008061 | 27.647 | 170 | 115 | 3 | 126 | 288 | 31 | 199 | 3.33e-11 | 62.8 |
| Msa0225530 | MtrunA17_Chr6g0488081 | 31.373 | 204 | 121 | 4 | 97 | 288 | 7 | 203 | 5.05e-17 | 79.7 |
| Msa0225530 | MtrunA17_Chr6g0488081 | 23.022 | 278 | 194 | 6 | 13 | 275 | 15 | 287 | 3.63e-15 | 74.7 |
| Msa0225530 | MtrunA17_Chr8g0378951 | 25.806 | 279 | 189 | 6 | 15 | 284 | 19 | 288 | 9.41e-17 | 79.0 |
| Msa0225530 | MtrunA17_Chr8g0378951 | 26.087 | 184 | 121 | 3 | 113 | 292 | 24 | 196 | 6.40e-12 | 65.1 |
| Msa0225530 | MtrunA17_Chr5g0431531 | 27.969 | 261 | 166 | 6 | 18 | 268 | 40 | 288 | 1.35e-16 | 79.0 |
| Msa0225530 | MtrunA17_Chr5g0431531 | 28.125 | 224 | 142 | 5 | 74 | 294 | 5 | 212 | 5.11e-16 | 77.0 |
| Msa0225530 | MtrunA17_Chr7g0241521 | 23.881 | 268 | 179 | 6 | 17 | 269 | 17 | 274 | 7.17e-16 | 76.6 |
| Msa0225530 | MtrunA17_Chr1g0195101 | 27.208 | 283 | 175 | 9 | 33 | 296 | 35 | 305 | 1.57e-15 | 75.5 |
| Msa0225530 | MtrunA17_Chr8g0343381 | 24.585 | 301 | 191 | 7 | 32 | 297 | 48 | 347 | 2.34e-15 | 75.5 |
| Msa0225530 | MtrunA17_Chr5g0423111 | 27.178 | 287 | 168 | 10 | 33 | 295 | 37 | 306 | 2.46e-15 | 75.5 |
| Msa0225530 | MtrunA17_Chr5g0423111 | 33.333 | 171 | 101 | 6 | 123 | 288 | 34 | 196 | 2.99e-12 | 66.2 |
| Msa0225530 | MtrunA17_Chr5g0396801 | 31.250 | 160 | 98 | 4 | 116 | 268 | 44 | 198 | 3.11e-15 | 75.1 |
| Msa0225530 | MtrunA17_Chr5g0396801 | 24.430 | 307 | 191 | 9 | 15 | 289 | 36 | 333 | 4.98e-14 | 71.6 |
| Msa0225530 | MtrunA17_Chr8g0367641 | 28.041 | 296 | 168 | 12 | 17 | 275 | 6 | 293 | 4.98e-15 | 74.3 |
| Msa0225530 | MtrunA17_Chr8g0347451 | 30.818 | 159 | 100 | 4 | 116 | 268 | 57 | 211 | 5.29e-15 | 74.3 |
| Msa0225530 | MtrunA17_Chr8g0347451 | 23.642 | 313 | 208 | 9 | 5 | 289 | 39 | 348 | 2.93e-13 | 69.3 |
| Msa0225530 | MtrunA17_Chr5g0436041 | 29.518 | 166 | 108 | 3 | 103 | 260 | 24 | 188 | 8.45e-15 | 73.6 |
| Msa0225530 | MtrunA17_Chr3g0103681 | 24.567 | 289 | 192 | 7 | 12 | 284 | 10 | 288 | 1.51e-14 | 72.8 |
| Msa0225530 | MtrunA17_Chr7g0219891 | 22.884 | 319 | 212 | 12 | 3 | 297 | 5 | 313 | 1.52e-14 | 72.8 |
| Msa0225530 | MtrunA17_Chr2g0293621 | 26.154 | 195 | 133 | 3 | 110 | 296 | 130 | 321 | 3.33e-14 | 72.0 |
| Msa0225530 | MtrunA17_Chr3g0088301 | 24.915 | 293 | 202 | 7 | 16 | 295 | 92 | 379 | 3.93e-14 | 72.0 |
| Msa0225530 | MtrunA17_Chr3g0086811 | 26.132 | 287 | 172 | 9 | 15 | 268 | 26 | 305 | 9.18e-14 | 70.9 |
| Msa0225530 | MtrunA17_Chr3g0086811 | 29.570 | 186 | 101 | 5 | 113 | 275 | 31 | 209 | 6.69e-12 | 65.5 |
| Msa0225530 | MtrunA17_Chr2g0328891 | 26.786 | 168 | 118 | 3 | 122 | 288 | 183 | 346 | 9.36e-14 | 70.9 |
| Msa0225530 | MtrunA17_Chr5g0412401 | 26.510 | 298 | 177 | 10 | 17 | 275 | 6 | 300 | 1.00e-13 | 70.5 |
| Msa0225530 | MtrunA17_Chr8g0352031 | 30.657 | 137 | 91 | 2 | 152 | 288 | 217 | 349 | 3.98e-13 | 68.9 |
| Msa0225530 | MtrunA17_Chr1g0196161 | 29.677 | 155 | 99 | 4 | 116 | 268 | 3 | 149 | 9.59e-13 | 65.5 |
| Msa0225530 | MtrunA17_Chr2g0296061 | 25.758 | 198 | 130 | 5 | 17 | 197 | 128 | 325 | 1.54e-12 | 67.0 |
| Msa0225530 | MtrunA17_Chr2g0296061 | 22.436 | 312 | 194 | 9 | 19 | 290 | 17 | 320 | 4.07e-11 | 62.8 |
| Msa0225530 | MtrunA17_Chr4g0051841 | 25.417 | 240 | 158 | 6 | 17 | 243 | 29 | 260 | 4.18e-12 | 65.9 |
| Msa0225530 | MtrunA17_Chr3g0133111 | 28.495 | 186 | 107 | 6 | 126 | 288 | 22 | 204 | 5.80e-12 | 65.1 |
| Msa0225530 | MtrunA17_Chr3g0133111 | 23.418 | 316 | 202 | 8 | 15 | 297 | 4 | 312 | 6.67e-12 | 65.1 |
| Msa0225530 | MtrunA17_Chr4g0067231 | 27.513 | 189 | 119 | 4 | 104 | 275 | 4 | 191 | 8.66e-12 | 64.7 |
| Msa0225530 | MtrunA17_Chr4g0067231 | 23.737 | 198 | 134 | 4 | 17 | 197 | 129 | 326 | 6.85e-11 | 62.0 |
| Msa0225530 | MtrunA17_Chr8g0393031 | 24.254 | 268 | 182 | 7 | 24 | 274 | 22 | 285 | 9.86e-12 | 64.7 |
| Msa0225530 | MtrunA17_Chr8g0372531 | 31.892 | 185 | 100 | 9 | 124 | 296 | 28 | 198 | 2.22e-11 | 63.5 |
| Msa0225530 | MtrunA17_Chr4g0040341 | 27.778 | 144 | 100 | 2 | 145 | 288 | 216 | 355 | 6.88e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0225530 | AT1G79900.1 | 59.732 | 298 | 107 | 4 | 1 | 297 | 1 | 286 | 4.80e-111 | 323 |
| Msa0225530 | AT5G46800.2 | 33.663 | 303 | 179 | 7 | 10 | 294 | 1 | 299 | 1.87e-42 | 148 |
| Msa0225530 | AT5G46800.3 | 33.663 | 303 | 179 | 7 | 10 | 294 | 1 | 299 | 1.87e-42 | 148 |
| Msa0225530 | AT5G46800.1 | 33.663 | 303 | 179 | 7 | 10 | 294 | 1 | 299 | 1.87e-42 | 148 |
| Msa0225530 | AT2G33820.1 | 28.669 | 293 | 194 | 5 | 15 | 294 | 16 | 306 | 5.12e-32 | 121 |
| Msa0225530 | AT2G33820.3 | 27.907 | 301 | 194 | 6 | 15 | 294 | 16 | 314 | 3.20e-29 | 114 |
| Msa0225530 | AT1G34065.2 | 32.075 | 265 | 142 | 9 | 13 | 270 | 71 | 304 | 3.76e-24 | 100 |
| Msa0225530 | AT1G34065.1 | 32.075 | 265 | 142 | 9 | 13 | 270 | 78 | 311 | 3.97e-24 | 100 |
| Msa0225530 | AT2G33820.2 | 29.333 | 225 | 151 | 4 | 76 | 294 | 3 | 225 | 3.63e-23 | 95.5 |
| Msa0225530 | AT5G19760.1 | 28.674 | 279 | 181 | 6 | 15 | 284 | 16 | 285 | 3.12e-22 | 94.4 |
| Msa0225530 | AT5G19760.1 | 26.562 | 192 | 120 | 4 | 113 | 297 | 21 | 198 | 1.69e-13 | 70.1 |
| Msa0225530 | AT4G32400.1 | 33.516 | 182 | 109 | 3 | 111 | 292 | 115 | 284 | 4.00e-22 | 95.5 |
| Msa0225530 | AT4G32400.1 | 25.952 | 289 | 196 | 8 | 15 | 297 | 112 | 388 | 9.44e-19 | 85.9 |
| Msa0225530 | AT5G01340.1 | 29.478 | 268 | 174 | 7 | 18 | 275 | 18 | 280 | 6.47e-22 | 94.0 |
| Msa0225530 | AT2G33820.4 | 27.679 | 224 | 148 | 4 | 15 | 225 | 16 | 238 | 1.54e-21 | 92.0 |
| Msa0225530 | AT2G33820.4 | 27.807 | 187 | 119 | 6 | 111 | 288 | 19 | 198 | 3.48e-11 | 62.8 |
| Msa0225530 | AT4G39460.2 | 29.123 | 285 | 170 | 10 | 17 | 297 | 58 | 314 | 5.67e-21 | 91.7 |
| Msa0225530 | AT4G39460.1 | 29.123 | 285 | 170 | 10 | 17 | 297 | 58 | 314 | 5.67e-21 | 91.7 |
| Msa0225530 | AT4G39460.3 | 29.123 | 285 | 170 | 10 | 17 | 297 | 58 | 314 | 5.67e-21 | 91.7 |
| Msa0225530 | AT3G54110.1 | 26.471 | 272 | 177 | 7 | 12 | 269 | 10 | 272 | 4.61e-20 | 88.6 |
| Msa0225530 | AT3G54110.1 | 27.933 | 179 | 122 | 3 | 116 | 288 | 21 | 198 | 1.70e-12 | 67.0 |
| Msa0225530 | AT4G11440.1 | 28.028 | 289 | 174 | 8 | 15 | 288 | 328 | 597 | 7.35e-20 | 90.1 |
| Msa0225530 | AT4G11440.2 | 28.028 | 289 | 174 | 8 | 15 | 288 | 328 | 597 | 7.35e-20 | 90.1 |
| Msa0225530 | AT3G55640.2 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 5.57e-19 | 84.7 |
| Msa0225530 | AT3G55640.3 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 5.57e-19 | 84.7 |
| Msa0225530 | AT1G14140.1 | 24.907 | 269 | 161 | 9 | 31 | 275 | 30 | 281 | 1.07e-18 | 84.7 |
| Msa0225530 | AT4G03115.1 | 27.237 | 257 | 157 | 8 | 31 | 275 | 52 | 290 | 1.28e-18 | 84.7 |
| Msa0225530 | AT4G03115.3 | 27.237 | 257 | 157 | 8 | 31 | 275 | 84 | 322 | 1.35e-18 | 85.1 |
| Msa0225530 | AT3G55640.1 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 2.27e-18 | 84.3 |
| Msa0225530 | AT3G55640.1 | 32.474 | 194 | 123 | 6 | 1 | 190 | 130 | 319 | 2.43e-16 | 78.6 |
| Msa0225530 | AT3G55640.1 | 26.545 | 275 | 170 | 10 | 16 | 269 | 37 | 300 | 6.45e-15 | 74.3 |
| Msa0225530 | AT3G55640.4 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 2.27e-18 | 84.3 |
| Msa0225530 | AT3G55640.4 | 32.474 | 194 | 123 | 6 | 1 | 190 | 130 | 319 | 2.43e-16 | 78.6 |
| Msa0225530 | AT3G55640.4 | 26.545 | 275 | 170 | 10 | 16 | 269 | 37 | 300 | 6.45e-15 | 74.3 |
| Msa0225530 | AT5G51050.1 | 24.735 | 283 | 198 | 7 | 17 | 294 | 223 | 495 | 5.81e-18 | 84.3 |
| Msa0225530 | AT5G51050.1 | 30.769 | 169 | 107 | 3 | 108 | 274 | 221 | 381 | 1.39e-13 | 71.2 |
| Msa0225530 | AT4G03115.5 | 27.119 | 236 | 148 | 6 | 46 | 275 | 2 | 219 | 9.52e-18 | 81.3 |
| Msa0225530 | AT4G03115.6 | 30.233 | 172 | 106 | 4 | 106 | 275 | 68 | 227 | 1.48e-17 | 80.9 |
| Msa0225530 | AT4G26180.2 | 29.442 | 197 | 121 | 3 | 104 | 288 | 15 | 205 | 2.95e-17 | 80.5 |
| Msa0225530 | AT4G26180.2 | 22.300 | 287 | 193 | 10 | 5 | 269 | 6 | 284 | 2.93e-13 | 69.3 |
| Msa0225530 | AT4G26180.1 | 29.442 | 197 | 121 | 3 | 104 | 288 | 15 | 205 | 5.20e-17 | 80.5 |
| Msa0225530 | AT4G26180.1 | 21.498 | 307 | 211 | 10 | 5 | 289 | 6 | 304 | 3.25e-13 | 69.3 |
| Msa0225530 | AT3G53940.2 | 30.890 | 191 | 112 | 4 | 111 | 289 | 74 | 256 | 7.86e-17 | 79.3 |
| Msa0225530 | AT1G74240.1 | 28.975 | 283 | 166 | 8 | 15 | 268 | 34 | 310 | 8.31e-17 | 80.1 |
| Msa0225530 | AT2G37890.1 | 26.354 | 277 | 170 | 10 | 15 | 269 | 43 | 307 | 8.33e-17 | 79.7 |
| Msa0225530 | AT2G37890.1 | 29.907 | 214 | 135 | 5 | 68 | 274 | 8 | 213 | 1.62e-15 | 76.3 |
| Msa0225530 | AT2G37890.1 | 28.649 | 185 | 125 | 4 | 16 | 196 | 151 | 332 | 4.62e-14 | 72.0 |
| Msa0225530 | AT4G01100.1 | 31.111 | 180 | 114 | 3 | 95 | 268 | 27 | 202 | 1.19e-16 | 79.7 |
| Msa0225530 | AT4G01100.1 | 25.083 | 303 | 196 | 9 | 15 | 289 | 40 | 339 | 2.49e-14 | 72.8 |
| Msa0225530 | AT3G53940.1 | 31.053 | 190 | 111 | 4 | 111 | 288 | 74 | 255 | 2.18e-16 | 79.0 |
| Msa0225530 | AT3G53940.1 | 25.182 | 274 | 177 | 9 | 15 | 269 | 71 | 335 | 1.79e-13 | 70.5 |
| Msa0225530 | AT3G53940.1 | 28.571 | 189 | 120 | 5 | 16 | 196 | 179 | 360 | 4.91e-13 | 69.3 |
| Msa0225530 | AT1G25380.1 | 27.737 | 274 | 178 | 8 | 33 | 292 | 37 | 304 | 3.31e-16 | 78.6 |
| Msa0225530 | AT1G25380.2 | 27.737 | 274 | 178 | 8 | 33 | 292 | 37 | 304 | 3.31e-16 | 78.6 |
| Msa0225530 | AT4G01100.2 | 28.866 | 194 | 114 | 3 | 95 | 268 | 27 | 216 | 4.50e-16 | 78.2 |
| Msa0225530 | AT4G01100.2 | 24.534 | 322 | 198 | 10 | 10 | 289 | 35 | 353 | 6.70e-14 | 71.6 |
| Msa0225530 | AT5G61810.2 | 25.182 | 274 | 191 | 6 | 17 | 288 | 65 | 326 | 4.62e-16 | 77.8 |
| Msa0225530 | AT1G07030.1 | 27.113 | 284 | 164 | 8 | 1 | 268 | 34 | 290 | 5.61e-16 | 77.4 |
| Msa0225530 | AT4G01100.3 | 33.113 | 151 | 91 | 3 | 124 | 268 | 6 | 152 | 8.96e-16 | 76.6 |
| Msa0225530 | AT4G01100.3 | 24.561 | 285 | 184 | 8 | 33 | 289 | 8 | 289 | 4.01e-13 | 68.9 |
| Msa0225530 | AT5G58970.1 | 24.028 | 283 | 190 | 7 | 17 | 284 | 16 | 288 | 1.03e-15 | 76.3 |
| Msa0225530 | AT5G61810.1 | 25.182 | 274 | 191 | 6 | 17 | 288 | 208 | 469 | 1.58e-15 | 77.0 |
| Msa0225530 | AT2G30160.1 | 25.430 | 291 | 163 | 8 | 1 | 268 | 36 | 295 | 1.91e-15 | 75.9 |
| Msa0225530 | AT5G09470.1 | 27.232 | 224 | 152 | 4 | 55 | 275 | 98 | 313 | 2.08e-15 | 75.9 |
| Msa0225530 | AT5G15640.1 | 23.585 | 318 | 214 | 12 | 3 | 297 | 12 | 323 | 6.43e-15 | 74.3 |
| Msa0225530 | AT2G47490.1 | 28.159 | 277 | 181 | 8 | 33 | 297 | 33 | 303 | 7.66e-15 | 73.9 |
| Msa0225530 | AT5G15640.2 | 23.607 | 305 | 205 | 11 | 15 | 297 | 18 | 316 | 1.10e-14 | 73.6 |
| Msa0225530 | AT5G42130.1 | 25.448 | 279 | 178 | 8 | 33 | 297 | 134 | 396 | 3.29e-14 | 72.8 |
| Msa0225530 | AT5G07320.1 | 24.138 | 261 | 184 | 6 | 30 | 288 | 222 | 470 | 3.37e-14 | 73.2 |
| Msa0225530 | AT4G24570.1 | 23.232 | 297 | 183 | 6 | 15 | 275 | 4 | 291 | 5.79e-14 | 71.6 |
| Msa0225530 | AT4G24570.1 | 29.688 | 192 | 103 | 4 | 126 | 288 | 22 | 210 | 7.56e-13 | 68.2 |
| Msa0225530 | AT1G72820.1 | 26.006 | 323 | 205 | 10 | 7 | 297 | 21 | 341 | 9.45e-14 | 71.2 |
| Msa0225530 | AT1G72820.2 | 26.006 | 323 | 205 | 10 | 7 | 297 | 21 | 341 | 9.45e-14 | 71.2 |
| Msa0225530 | AT1G74240.2 | 28.571 | 266 | 155 | 8 | 32 | 268 | 3 | 262 | 1.19e-13 | 70.5 |
| Msa0225530 | AT3G08580.2 | 29.927 | 137 | 92 | 2 | 152 | 288 | 233 | 365 | 3.02e-13 | 69.7 |
| Msa0225530 | AT3G08580.1 | 29.927 | 137 | 92 | 2 | 152 | 288 | 233 | 365 | 3.02e-13 | 69.7 |
| Msa0225530 | AT5G26200.1 | 24.026 | 308 | 205 | 9 | 4 | 288 | 30 | 331 | 3.37e-13 | 69.3 |
| Msa0225530 | AT5G13490.1 | 29.861 | 144 | 97 | 2 | 145 | 288 | 230 | 369 | 3.59e-13 | 69.7 |
| Msa0225530 | AT5G13490.2 | 29.861 | 144 | 97 | 2 | 145 | 288 | 230 | 369 | 3.59e-13 | 69.7 |
| Msa0225530 | AT1G14560.2 | 22.593 | 270 | 183 | 5 | 33 | 281 | 43 | 307 | 1.03e-12 | 67.8 |
| Msa0225530 | AT1G14560.1 | 22.727 | 264 | 178 | 5 | 33 | 275 | 43 | 301 | 1.32e-12 | 67.8 |
| Msa0225530 | AT5G17400.1 | 21.245 | 273 | 197 | 5 | 16 | 274 | 13 | 281 | 1.72e-12 | 67.0 |
| Msa0225530 | AT5G48970.2 | 25.871 | 201 | 129 | 5 | 17 | 197 | 64 | 264 | 2.71e-12 | 66.2 |
| Msa0225530 | AT5G48970.1 | 25.871 | 201 | 129 | 5 | 17 | 197 | 135 | 335 | 6.99e-12 | 65.5 |
| Msa0225530 | AT5G48970.1 | 26.471 | 204 | 135 | 5 | 105 | 296 | 18 | 218 | 9.71e-11 | 62.0 |
| Msa0225530 | AT2G39970.1 | 21.017 | 295 | 187 | 7 | 31 | 284 | 22 | 311 | 7.79e-12 | 65.5 |
| Msa0225530 | AT4G28390.1 | 28.467 | 137 | 94 | 2 | 152 | 288 | 231 | 363 | 1.28e-11 | 65.1 |
| Msa0225530 | AT4G28390.2 | 28.467 | 137 | 94 | 2 | 152 | 288 | 231 | 363 | 1.28e-11 | 65.1 |
| Msa0225530 | AT5G66380.1 | 27.181 | 298 | 186 | 10 | 19 | 294 | 12 | 300 | 2.00e-11 | 63.9 |
| Msa0225530 | AT2G26360.1 | 25.287 | 261 | 171 | 10 | 12 | 268 | 110 | 350 | 3.03e-11 | 63.9 |
Find 73 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATCTTTGATTATCTTTA+AGG | 0.014724 | 2_1:+75664504 | None:intergenic |
| AAATGTTGTGATGAACAATT+TGG | 0.242168 | 2_1:-75666573 | Msa0225530:CDS |
| GAGAAGAGAGAATGGAGTTT+TGG | 0.274701 | 2_1:-75666601 | Msa0225530:exon |
| GAGTTTGTAGCTGGTGGATT+TGG | 0.292105 | 2_1:-75666545 | Msa0225530:CDS |
| CGCGGCATTTATCGAGGATT+TGG | 0.311079 | 2_1:-75664769 | Msa0225530:CDS |
| CCTGCTCTAGCCTTATACTT+TGG | 0.317029 | 2_1:-75664724 | Msa0225530:CDS |
| CTCATATGTCCCAAAGTATA+AGG | 0.332931 | 2_1:+75664714 | None:intergenic |
| ATTGTCCTATGGAGAGGTTT+AGG | 0.345579 | 2_1:-75664475 | Msa0225530:CDS |
| CAACATCGTTAGAAATTTGT+TGG | 0.348347 | 2_1:-75666441 | Msa0225530:CDS |
| CTGCTTATCAAGTCTCTCTA+AGG | 0.354957 | 2_1:-75664408 | Msa0225530:CDS |
| TGAGTCTTGCTAAGAACATT+TGG | 0.357193 | 2_1:-75664807 | Msa0225530:CDS |
| TCCATGGTGAATGTTGCTTT+AGG | 0.368395 | 2_1:-75664949 | Msa0225530:CDS |
| AATGTTGTGATGAACAATTT+GGG | 0.376857 | 2_1:-75666572 | Msa0225530:CDS |
| CTGCTCTAGCCTTATACTTT+GGG | 0.383027 | 2_1:-75664723 | Msa0225530:CDS |
| TTTCTCTTTGATGTAACAAC+AGG | 0.399037 | 2_1:-75666632 | Msa0225530:five_prime_UTR |
| TTTATCTCCTCAACCATTGA+AGG | 0.399256 | 2_1:+75664337 | None:intergenic |
| AAAATTGAGAGAAGAGAGAA+TGG | 0.403716 | 2_1:-75666609 | Msa0225530:exon |
| TCGTGGGATGGCTGTTCCTT+TGG | 0.409968 | 2_1:-75666393 | Msa0225530:CDS |
| CTTGTCTTTATAACATCTGT+AGG | 0.415915 | 2_1:+75664580 | None:intergenic |
| GTTGAAATACAAAGGCATCT+TGG | 0.418743 | 2_1:-75664533 | Msa0225530:CDS |
| CGTGTCATGCAACAACAATC+TGG | 0.425877 | 2_1:-75666479 | Msa0225530:CDS |
| GGGAGAGAGTTTGTAGCTGG+TGG | 0.429135 | 2_1:-75666551 | Msa0225530:CDS |
| TAAAAGCATTACTCCTTCAA+TGG | 0.435285 | 2_1:-75664350 | Msa0225530:three_prime_UTR |
| GCTGTTCCTTTGGCCTCTGT+TGG | 0.447549 | 2_1:-75666383 | Msa0225530:CDS |
| TTCACATGGACCTCCTTCCA+TGG | 0.462240 | 2_1:-75664965 | Msa0225530:CDS |
| TTTGTAGCAGGAGGATTAGC+AGG | 0.467430 | 2_1:-75664628 | Msa0225530:CDS |
| CGTTAGAAATTTGTTGGCTA+AGG | 0.470910 | 2_1:-75666435 | Msa0225530:CDS |
| CATTACTCCTTCAATGGTTG+AGG | 0.474190 | 2_1:-75664344 | Msa0225530:three_prime_UTR |
| AATGTTGCTTTAGGAGGACT+TGG | 0.477406 | 2_1:-75664940 | Msa0225530:CDS |
| TTTGTAGCTGGTGGATTTGG+AGG | 0.479219 | 2_1:-75666542 | Msa0225530:CDS |
| CAGGGGAGATCAAAATACTT+TGG | 0.481107 | 2_1:+75664905 | None:intergenic |
| GGTGGATTTGGAGGCACAGC+AGG | 0.491842 | 2_1:-75666533 | Msa0225530:CDS |
| TTGGGGAGAGAGTTTGTAGC+TGG | 0.494346 | 2_1:-75666554 | Msa0225530:CDS |
| AGAAATTTGTTGGCTAAGGA+AGG | 0.495551 | 2_1:-75666431 | Msa0225530:CDS |
| GCTTTAGGAGGACTTGGTGC+AGG | 0.499633 | 2_1:-75664934 | Msa0225530:CDS |
| TGACAACTTTCTCTGCAACC+AGG | 0.506703 | 2_1:+75664670 | None:intergenic |
| GTGAGTACTATGTTTGTAGC+AGG | 0.516409 | 2_1:-75664640 | Msa0225530:CDS |
| TATAATCTCAAGTTATCCAT+TGG | 0.519724 | 2_1:-75666510 | Msa0225530:CDS |
| ATGGTGAATGTTGCTTTAGG+AGG | 0.521494 | 2_1:-75664946 | Msa0225530:CDS |
| GACCTACTGCTTTGTATCGT+GGG | 0.535570 | 2_1:-75666409 | Msa0225530:CDS |
| GGCCCCTCTACTTCTTCACA+TGG | 0.536333 | 2_1:-75664979 | Msa0225530:CDS |
| ATGAAGGTTCTATTGTCCTA+TGG | 0.539984 | 2_1:-75664486 | Msa0225530:CDS |
| TACTGCTTTGTATCGTGGGA+TGG | 0.540002 | 2_1:-75666405 | Msa0225530:CDS |
| GACAACTTTCTCTGCAACCA+GGG | 0.546362 | 2_1:+75664671 | None:intergenic |
| TTAAAGATAATCAAAGATGA+AGG | 0.551996 | 2_1:-75664502 | Msa0225530:CDS |
| GATTAGCAGGGATAGCAAGT+TGG | 0.552263 | 2_1:-75664615 | Msa0225530:CDS |
| CTTAGAGAGACTTGATAAGC+AGG | 0.553970 | 2_1:+75664409 | None:intergenic |
| GGTTCTATTGTCCTATGGAG+AGG | 0.556965 | 2_1:-75664481 | Msa0225530:CDS |
| GGACCTACTGCTTTGTATCG+TGG | 0.558858 | 2_1:-75666410 | Msa0225530:CDS |
| CCAAAGTATAAGGCTAGAGC+AGG | 0.559278 | 2_1:+75664724 | None:intergenic |
| AGGTCCATGTGAAGAAGTAG+AGG | 0.566149 | 2_1:+75664975 | None:intergenic |
| TCTTCTTCGTTGAAATACAA+AGG | 0.570873 | 2_1:-75664541 | Msa0225530:CDS |
| CTCCCTTAAGAAAATATCGA+GGG | 0.575513 | 2_1:+75664230 | None:intergenic |
| ATGTTCTTAGCAAGACTCAT+GGG | 0.580615 | 2_1:+75664811 | None:intergenic |
| TTGTCTTTATAACATCTGTA+GGG | 0.581616 | 2_1:+75664581 | None:intergenic |
| AAAGCAACATTCACCATGGA+AGG | 0.582192 | 2_1:+75664952 | None:intergenic |
| AATGTTCTTAGCAAGACTCA+TGG | 0.587401 | 2_1:+75664810 | None:intergenic |
| GGCCTTCGCGGCATTTATCG+AGG | 0.588676 | 2_1:-75664775 | Msa0225530:CDS |
| AGTACTATGTTTGTAGCAGG+AGG | 0.589645 | 2_1:-75664637 | Msa0225530:CDS |
| TTGCTCCTAAACCTCTCCAT+AGG | 0.593048 | 2_1:+75664470 | None:intergenic |
| ATCCTCGATAAATGCCGCGA+AGG | 0.596054 | 2_1:+75664773 | None:intergenic |
| GGTCCATGTGAAGAAGTAGA+GGG | 0.615402 | 2_1:+75664976 | None:intergenic |
| ACTCCCTTAAGAAAATATCG+AGG | 0.629365 | 2_1:+75664229 | None:intergenic |
| TGAAAACCAACAGAGGCCAA+AGG | 0.633415 | 2_1:+75666377 | None:intergenic |
| ATGACACGAATTGTATCCAA+TGG | 0.642830 | 2_1:+75666494 | None:intergenic |
| GCAACATTCACCATGGAAGG+AGG | 0.658325 | 2_1:+75664955 | None:intergenic |
| TTGTAGCAGGAGGATTAGCA+GGG | 0.660168 | 2_1:-75664627 | Msa0225530:CDS |
| TCCTAAAGCAACATTCACCA+TGG | 0.660244 | 2_1:+75664948 | None:intergenic |
| ATGTTGTGATGAACAATTTG+GGG | 0.663183 | 2_1:-75666571 | Msa0225530:CDS |
| ATCCCACGATACAAAGCAGT+AGG | 0.668316 | 2_1:+75666407 | None:intergenic |
| GTCCATGTGAAGAAGTAGAG+GGG | 0.690759 | 2_1:+75664977 | None:intergenic |
| CCTAACCTGAAAACCAACAG+AGG | 0.709999 | 2_1:+75666370 | None:intergenic |
| ACAAGAGAGAAACTTCACCC+TGG | 0.733018 | 2_1:-75664688 | Msa0225530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAATTAAATAAAAAA+AGG | + | chr2_1:75665123-75665142 | None:intergenic | 0.0% |
| !! | TAAATTAATTAAATAAAAAA+AGG | + | chr2_1:75665123-75665142 | None:intergenic | 0.0% |
| !! | TCATATCTAATTTAATATAT+CGG | - | chr2_1:75665026-75665045 | Msa0225530:CDS | 10.0% |
| !!! | TTATATAACTTTTATTTTTG+AGG | - | chr2_1:75665143-75665162 | Msa0225530:intron | 10.0% |
| !!! | TTTCTAAAATGTTTAATAAT+AGG | + | chr2_1:75665607-75665626 | None:intergenic | 10.0% |
| !! | TCATATCTAATTTAATATAT+CGG | - | chr2_1:75665026-75665045 | Msa0225530:CDS | 10.0% |
| !!! | TTATATAACTTTTATTTTTG+AGG | - | chr2_1:75665143-75665162 | Msa0225530:intron | 10.0% |
| !!! | TTTCTAAAATGTTTAATAAT+AGG | + | chr2_1:75665607-75665626 | None:intergenic | 10.0% |
| !! | AAACAAGAAAACAAAAATAA+AGG | + | chr2_1:75664936-75664955 | None:intergenic | 15.0% |
| !!! | ATTAAACATTTTAGAAAGAA+TGG | - | chr2_1:75665610-75665629 | Msa0225530:intron | 15.0% |
| !! | TGTTGTCATAAAAAAAAAAA+TGG | + | chr2_1:75666632-75666651 | None:intergenic | 15.0% |
| !! | AAACAAGAAAACAAAAATAA+AGG | + | chr2_1:75664936-75664955 | None:intergenic | 15.0% |
| !!! | ATTAAACATTTTAGAAAGAA+TGG | - | chr2_1:75665610-75665629 | Msa0225530:intron | 15.0% |
| !! | TGTTGTCATAAAAAAAAAAA+TGG | + | chr2_1:75666632-75666651 | None:intergenic | 15.0% |
| !! | TTATTATAATGAAGGGATTA+AGG | + | chr2_1:75664552-75664571 | None:intergenic | 20.0% |
| !! | ATCAAACAATTCAAATTTAG+TGG | - | chr2_1:75664603-75664622 | Msa0225530:CDS | 20.0% |
| !! | TCAATCACAATTTAAAAACA+AGG | + | chr2_1:75664673-75664692 | None:intergenic | 20.0% |
| !!! | GTTTTTAAATTGTGATTGAA+TGG | - | chr2_1:75664674-75664693 | Msa0225530:CDS | 20.0% |
| !! | GAAAACAAAAATAAAGGAAA+TGG | + | chr2_1:75664930-75664949 | None:intergenic | 20.0% |
| !! | TTTAACATGCATAAGTAAAA+TGG | - | chr2_1:75664953-75664972 | Msa0225530:CDS | 20.0% |
| !! | TAAAAAAAGGACAATTCTAT+AGG | + | chr2_1:75665110-75665129 | None:intergenic | 20.0% |
| !! | ATCTAGTTGTTAAAATACTA+CGG | - | chr2_1:75665233-75665252 | Msa0225530:intron | 20.0% |
| !! | AGAAAAATACTATAATTGCA+GGG | + | chr2_1:75665655-75665674 | None:intergenic | 20.0% |
| !! | AAGAAAAATACTATAATTGC+AGG | + | chr2_1:75665656-75665675 | None:intergenic | 20.0% |
| !! | TTCATCTTTGATTATCTTTA+AGG | + | chr2_1:75666382-75666401 | None:intergenic | 20.0% |
| !! | TTAAAGATAATCAAAGATGA+AGG | - | chr2_1:75666381-75666400 | Msa0225530:CDS | 20.0% |
| !!! | ACTTTTTATTGCAATCTTTT+TGG | + | chr2_1:75666575-75666594 | None:intergenic | 20.0% |
| !! | TTATTATAATGAAGGGATTA+AGG | + | chr2_1:75664552-75664571 | None:intergenic | 20.0% |
| !! | ATCAAACAATTCAAATTTAG+TGG | - | chr2_1:75664603-75664622 | Msa0225530:CDS | 20.0% |
| !! | TCAATCACAATTTAAAAACA+AGG | + | chr2_1:75664673-75664692 | None:intergenic | 20.0% |
| !!! | GTTTTTAAATTGTGATTGAA+TGG | - | chr2_1:75664674-75664693 | Msa0225530:CDS | 20.0% |
| !! | GAAAACAAAAATAAAGGAAA+TGG | + | chr2_1:75664930-75664949 | None:intergenic | 20.0% |
| !! | TTTAACATGCATAAGTAAAA+TGG | - | chr2_1:75664953-75664972 | Msa0225530:CDS | 20.0% |
| !! | TAAAAAAAGGACAATTCTAT+AGG | + | chr2_1:75665110-75665129 | None:intergenic | 20.0% |
| !! | ATCTAGTTGTTAAAATACTA+CGG | - | chr2_1:75665233-75665252 | Msa0225530:intron | 20.0% |
| !! | AGAAAAATACTATAATTGCA+GGG | + | chr2_1:75665655-75665674 | None:intergenic | 20.0% |
| !! | AAGAAAAATACTATAATTGC+AGG | + | chr2_1:75665656-75665675 | None:intergenic | 20.0% |
| !! | TTCATCTTTGATTATCTTTA+AGG | + | chr2_1:75666382-75666401 | None:intergenic | 20.0% |
| !! | TTAAAGATAATCAAAGATGA+AGG | - | chr2_1:75666381-75666400 | Msa0225530:CDS | 20.0% |
| !!! | ACTTTTTATTGCAATCTTTT+TGG | + | chr2_1:75666575-75666594 | None:intergenic | 20.0% |
| ! | AAATGTTGTGATGAACAATT+TGG | - | chr2_1:75664310-75664329 | Msa0225530:three_prime_UTR | 25.0% |
| ! | AATGTTGTGATGAACAATTT+GGG | - | chr2_1:75664311-75664330 | Msa0225530:three_prime_UTR | 25.0% |
| ! | TATAATCTCAAGTTATCCAT+TGG | - | chr2_1:75664373-75664392 | Msa0225530:exon | 25.0% |
| ! | CACTTCGTTATTATAATGAA+GGG | + | chr2_1:75664559-75664578 | None:intergenic | 25.0% |
| ! | CTTCATTATAATAACGAAGT+GGG | - | chr2_1:75664558-75664577 | Msa0225530:CDS | 25.0% |
| ! | AATTTGATCAAGATTGACTA+TGG | + | chr2_1:75664791-75664810 | None:intergenic | 25.0% |
| !! | GCGCATTTTTAAATCAATTT+TGG | - | chr2_1:75664844-75664863 | Msa0225530:CDS | 25.0% |
| ! | GTATCTGAAAAATATGCTAT+TGG | + | chr2_1:75665390-75665409 | None:intergenic | 25.0% |
| ! | TTTGTAGAACACATATATGT+TGG | + | chr2_1:75665537-75665556 | None:intergenic | 25.0% |
| ! | GCTCATTTGAAAAATACATT+TGG | - | chr2_1:75665565-75665584 | Msa0225530:intron | 25.0% |
| !!! | AATTTTAATCAACTCAACAG+GGG | + | chr2_1:75665998-75666017 | None:intergenic | 25.0% |
| !!! | GAATTTTAATCAACTCAACA+GGG | + | chr2_1:75665999-75666018 | None:intergenic | 25.0% |
| !! | TTAAGTTCTTTTGTAGTTGA+AGG | + | chr2_1:75666023-75666042 | None:intergenic | 25.0% |
| ! | TAAGAACATTTGGAAAAATG+AGG | - | chr2_1:75666086-75666105 | Msa0225530:intron | 25.0% |
| ! | AAGAACATTTGGAAAAATGA+GGG | - | chr2_1:75666087-75666106 | Msa0225530:intron | 25.0% |
| ! | TTGTCTTTATAACATCTGTA+GGG | + | chr2_1:75666305-75666324 | None:intergenic | 25.0% |
| ! | TGCAATAAAAAGTTAGTAAG+AGG | - | chr2_1:75666582-75666601 | Msa0225530:CDS | 25.0% |
| ! | AAATGTTGTGATGAACAATT+TGG | - | chr2_1:75664310-75664329 | Msa0225530:three_prime_UTR | 25.0% |
| ! | AATGTTGTGATGAACAATTT+GGG | - | chr2_1:75664311-75664330 | Msa0225530:three_prime_UTR | 25.0% |
| ! | TATAATCTCAAGTTATCCAT+TGG | - | chr2_1:75664373-75664392 | Msa0225530:exon | 25.0% |
| ! | CACTTCGTTATTATAATGAA+GGG | + | chr2_1:75664559-75664578 | None:intergenic | 25.0% |
| ! | CTTCATTATAATAACGAAGT+GGG | - | chr2_1:75664558-75664577 | Msa0225530:CDS | 25.0% |
| ! | AATTTGATCAAGATTGACTA+TGG | + | chr2_1:75664791-75664810 | None:intergenic | 25.0% |
| !! | GCGCATTTTTAAATCAATTT+TGG | - | chr2_1:75664844-75664863 | Msa0225530:CDS | 25.0% |
| ! | GTATCTGAAAAATATGCTAT+TGG | + | chr2_1:75665390-75665409 | None:intergenic | 25.0% |
| ! | TTTGTAGAACACATATATGT+TGG | + | chr2_1:75665537-75665556 | None:intergenic | 25.0% |
| ! | GCTCATTTGAAAAATACATT+TGG | - | chr2_1:75665565-75665584 | Msa0225530:intron | 25.0% |
| !!! | AATTTTAATCAACTCAACAG+GGG | + | chr2_1:75665998-75666017 | None:intergenic | 25.0% |
| !!! | GAATTTTAATCAACTCAACA+GGG | + | chr2_1:75665999-75666018 | None:intergenic | 25.0% |
| !! | TTAAGTTCTTTTGTAGTTGA+AGG | + | chr2_1:75666023-75666042 | None:intergenic | 25.0% |
| ! | TAAGAACATTTGGAAAAATG+AGG | - | chr2_1:75666086-75666105 | Msa0225530:intron | 25.0% |
| ! | AAGAACATTTGGAAAAATGA+GGG | - | chr2_1:75666087-75666106 | Msa0225530:intron | 25.0% |
| ! | TTGTCTTTATAACATCTGTA+GGG | + | chr2_1:75666305-75666324 | None:intergenic | 25.0% |
| ! | TGCAATAAAAAGTTAGTAAG+AGG | - | chr2_1:75666582-75666601 | Msa0225530:CDS | 25.0% |
| TTTCTCTTTGATGTAACAAC+AGG | - | chr2_1:75664251-75664270 | Msa0225530:three_prime_UTR | 30.0% | |
| AAAATTGAGAGAAGAGAGAA+TGG | - | chr2_1:75664274-75664293 | Msa0225530:three_prime_UTR | 30.0% | |
| ATGTTGTGATGAACAATTTG+GGG | - | chr2_1:75664312-75664331 | Msa0225530:three_prime_UTR | 30.0% | |
| CAACATCGTTAGAAATTTGT+TGG | - | chr2_1:75664442-75664461 | Msa0225530:CDS | 30.0% | |
| CCACTTCGTTATTATAATGA+AGG | + | chr2_1:75664560-75664579 | None:intergenic | 30.0% | |
| CCTTCATTATAATAACGAAG+TGG | - | chr2_1:75664557-75664576 | Msa0225530:CDS | 30.0% | |
| GATGTGAATTATTGATGCAA+TGG | + | chr2_1:75665008-75665027 | None:intergenic | 30.0% | |
| GGTAAGATTTATTGATCCAA+CGG | - | chr2_1:75665047-75665066 | Msa0225530:intron | 30.0% | |
| CATAAAATAGTTTCTACCGT+TGG | + | chr2_1:75665066-75665085 | None:intergenic | 30.0% | |
| TTAAAATACTACGGTTCAAG+TGG | - | chr2_1:75665242-75665261 | Msa0225530:intron | 30.0% | |
| CCTAGTAAGAAACTTATAGA+GGG | + | chr2_1:75665346-75665365 | None:intergenic | 30.0% | |
| TCCTAGTAAGAAACTTATAG+AGG | + | chr2_1:75665347-75665366 | None:intergenic | 30.0% | |
| AGTTTCTTACTAGGATAACT+AGG | - | chr2_1:75665352-75665371 | Msa0225530:intron | 30.0% | |
| GTTTCTTACTAGGATAACTA+GGG | - | chr2_1:75665353-75665372 | Msa0225530:intron | 30.0% | |
| CATGTGATAAATGAACTCAA+CGG | - | chr2_1:75665496-75665515 | Msa0225530:intron | 30.0% | |
| ! | TATGTTGGACAGTGTTTTAT+AGG | + | chr2_1:75665522-75665541 | None:intergenic | 30.0% |
| TTAACCATTGATGTCATACA+TGG | - | chr2_1:75665738-75665757 | Msa0225530:intron | 30.0% | |
| TATTGTCGCATCAACTTATT+GGG | + | chr2_1:75665788-75665807 | None:intergenic | 30.0% | |
| ATATTGTCGCATCAACTTAT+TGG | + | chr2_1:75665789-75665808 | None:intergenic | 30.0% | |
| !! | ACCGTTTTTACAAGAATTGT+TGG | - | chr2_1:75665883-75665902 | Msa0225530:intron | 30.0% |
| GCCAACAATTCTTGTAAAAA+CGG | + | chr2_1:75665887-75665906 | None:intergenic | 30.0% | |
| !! | CGAATTTTAATCAACTCAAC+AGG | + | chr2_1:75666000-75666019 | None:intergenic | 30.0% |
| CTTGTCTTTATAACATCTGT+AGG | + | chr2_1:75666306-75666325 | None:intergenic | 30.0% | |
| TCTTCTTCGTTGAAATACAA+AGG | - | chr2_1:75666342-75666361 | Msa0225530:intron | 30.0% | |
| !! | TAAAAGCATTACTCCTTCAA+TGG | - | chr2_1:75666533-75666552 | Msa0225530:CDS | 30.0% |
| TTTCTCTTTGATGTAACAAC+AGG | - | chr2_1:75664251-75664270 | Msa0225530:three_prime_UTR | 30.0% | |
| AAAATTGAGAGAAGAGAGAA+TGG | - | chr2_1:75664274-75664293 | Msa0225530:three_prime_UTR | 30.0% | |
| ATGTTGTGATGAACAATTTG+GGG | - | chr2_1:75664312-75664331 | Msa0225530:three_prime_UTR | 30.0% | |
| CAACATCGTTAGAAATTTGT+TGG | - | chr2_1:75664442-75664461 | Msa0225530:CDS | 30.0% | |
| CCACTTCGTTATTATAATGA+AGG | + | chr2_1:75664560-75664579 | None:intergenic | 30.0% | |
| CCTTCATTATAATAACGAAG+TGG | - | chr2_1:75664557-75664576 | Msa0225530:CDS | 30.0% | |
| GATGTGAATTATTGATGCAA+TGG | + | chr2_1:75665008-75665027 | None:intergenic | 30.0% | |
| GGTAAGATTTATTGATCCAA+CGG | - | chr2_1:75665047-75665066 | Msa0225530:intron | 30.0% | |
| CATAAAATAGTTTCTACCGT+TGG | + | chr2_1:75665066-75665085 | None:intergenic | 30.0% | |
| TTAAAATACTACGGTTCAAG+TGG | - | chr2_1:75665242-75665261 | Msa0225530:intron | 30.0% | |
| CCTAGTAAGAAACTTATAGA+GGG | + | chr2_1:75665346-75665365 | None:intergenic | 30.0% | |
| TCCTAGTAAGAAACTTATAG+AGG | + | chr2_1:75665347-75665366 | None:intergenic | 30.0% | |
| AGTTTCTTACTAGGATAACT+AGG | - | chr2_1:75665352-75665371 | Msa0225530:intron | 30.0% | |
| GTTTCTTACTAGGATAACTA+GGG | - | chr2_1:75665353-75665372 | Msa0225530:intron | 30.0% | |
| CATGTGATAAATGAACTCAA+CGG | - | chr2_1:75665496-75665515 | Msa0225530:intron | 30.0% | |
| ! | TATGTTGGACAGTGTTTTAT+AGG | + | chr2_1:75665522-75665541 | None:intergenic | 30.0% |
| TTAACCATTGATGTCATACA+TGG | - | chr2_1:75665738-75665757 | Msa0225530:intron | 30.0% | |
| TATTGTCGCATCAACTTATT+GGG | + | chr2_1:75665788-75665807 | None:intergenic | 30.0% | |
| ATATTGTCGCATCAACTTAT+TGG | + | chr2_1:75665789-75665808 | None:intergenic | 30.0% | |
| !! | ACCGTTTTTACAAGAATTGT+TGG | - | chr2_1:75665883-75665902 | Msa0225530:intron | 30.0% |
| GCCAACAATTCTTGTAAAAA+CGG | + | chr2_1:75665887-75665906 | None:intergenic | 30.0% | |
| !! | CGAATTTTAATCAACTCAAC+AGG | + | chr2_1:75666000-75666019 | None:intergenic | 30.0% |
| CTTGTCTTTATAACATCTGT+AGG | + | chr2_1:75666306-75666325 | None:intergenic | 30.0% | |
| TCTTCTTCGTTGAAATACAA+AGG | - | chr2_1:75666342-75666361 | Msa0225530:intron | 30.0% | |
| !! | TAAAAGCATTACTCCTTCAA+TGG | - | chr2_1:75666533-75666552 | Msa0225530:CDS | 30.0% |
| ATGACACGAATTGTATCCAA+TGG | + | chr2_1:75664392-75664411 | None:intergenic | 35.0% | |
| !! | CGTTAGAAATTTGTTGGCTA+AGG | - | chr2_1:75664448-75664467 | Msa0225530:CDS | 35.0% |
| !! | AGAAATTTGTTGGCTAAGGA+AGG | - | chr2_1:75664452-75664471 | Msa0225530:CDS | 35.0% |
| ! | ACATGCAGTCGATTTAACTT+TGG | + | chr2_1:75664751-75664770 | None:intergenic | 35.0% |
| TGATCAAGATTGACTATGGT+CGG | + | chr2_1:75664787-75664806 | None:intergenic | 35.0% | |
| TTATTGATGCAATGGTGAAG+TGG | + | chr2_1:75665000-75665019 | None:intergenic | 35.0% | |
| GAGTACTCAAGTTTAATCCT+TGG | - | chr2_1:75665309-75665328 | Msa0225530:intron | 35.0% | |
| AGAAACTTATAGAGGGATCA+GGG | + | chr2_1:75665339-75665358 | None:intergenic | 35.0% | |
| AAGAAACTTATAGAGGGATC+AGG | + | chr2_1:75665340-75665359 | None:intergenic | 35.0% | |
| CCCTCTATAAGTTTCTTACT+AGG | - | chr2_1:75665343-75665362 | Msa0225530:intron | 35.0% | |
| !! | TGCAAGTTAAATGGTTTGGT+AGG | + | chr2_1:75665473-75665492 | None:intergenic | 35.0% |
| GAAGTGCAAGTTAAATGGTT+TGG | + | chr2_1:75665477-75665496 | None:intergenic | 35.0% | |
| CACATGAAGTGCAAGTTAAA+TGG | + | chr2_1:75665482-75665501 | None:intergenic | 35.0% | |
| ATTGTCGCATCAACTTATTG+GGG | + | chr2_1:75665787-75665806 | None:intergenic | 35.0% | |
| ATGTTCTTAGCAAGACTCAT+GGG | + | chr2_1:75666075-75666094 | None:intergenic | 35.0% | |
| AATGTTCTTAGCAAGACTCA+TGG | + | chr2_1:75666076-75666095 | None:intergenic | 35.0% | |
| TGAGTCTTGCTAAGAACATT+TGG | - | chr2_1:75666076-75666095 | Msa0225530:intron | 35.0% | |
| CTCATATGTCCCAAAGTATA+AGG | + | chr2_1:75666172-75666191 | None:intergenic | 35.0% | |
| !! | GTTGAAATACAAAGGCATCT+TGG | - | chr2_1:75666350-75666369 | Msa0225530:intron | 35.0% |
| ATGAAGGTTCTATTGTCCTA+TGG | - | chr2_1:75666397-75666416 | Msa0225530:CDS | 35.0% | |
| TTTATCTCCTCAACCATTGA+AGG | + | chr2_1:75666549-75666568 | None:intergenic | 35.0% | |
| ATGACACGAATTGTATCCAA+TGG | + | chr2_1:75664392-75664411 | None:intergenic | 35.0% | |
| !! | CGTTAGAAATTTGTTGGCTA+AGG | - | chr2_1:75664448-75664467 | Msa0225530:CDS | 35.0% |
| !! | AGAAATTTGTTGGCTAAGGA+AGG | - | chr2_1:75664452-75664471 | Msa0225530:CDS | 35.0% |
| ! | ACATGCAGTCGATTTAACTT+TGG | + | chr2_1:75664751-75664770 | None:intergenic | 35.0% |
| TGATCAAGATTGACTATGGT+CGG | + | chr2_1:75664787-75664806 | None:intergenic | 35.0% | |
| TTATTGATGCAATGGTGAAG+TGG | + | chr2_1:75665000-75665019 | None:intergenic | 35.0% | |
| GAGTACTCAAGTTTAATCCT+TGG | - | chr2_1:75665309-75665328 | Msa0225530:intron | 35.0% | |
| AGAAACTTATAGAGGGATCA+GGG | + | chr2_1:75665339-75665358 | None:intergenic | 35.0% | |
| AAGAAACTTATAGAGGGATC+AGG | + | chr2_1:75665340-75665359 | None:intergenic | 35.0% | |
| CCCTCTATAAGTTTCTTACT+AGG | - | chr2_1:75665343-75665362 | Msa0225530:intron | 35.0% | |
| !! | TGCAAGTTAAATGGTTTGGT+AGG | + | chr2_1:75665473-75665492 | None:intergenic | 35.0% |
| GAAGTGCAAGTTAAATGGTT+TGG | + | chr2_1:75665477-75665496 | None:intergenic | 35.0% | |
| CACATGAAGTGCAAGTTAAA+TGG | + | chr2_1:75665482-75665501 | None:intergenic | 35.0% | |
| ATTGTCGCATCAACTTATTG+GGG | + | chr2_1:75665787-75665806 | None:intergenic | 35.0% | |
| ATGTTCTTAGCAAGACTCAT+GGG | + | chr2_1:75666075-75666094 | None:intergenic | 35.0% | |
| AATGTTCTTAGCAAGACTCA+TGG | + | chr2_1:75666076-75666095 | None:intergenic | 35.0% | |
| TGAGTCTTGCTAAGAACATT+TGG | - | chr2_1:75666076-75666095 | Msa0225530:intron | 35.0% | |
| CTCATATGTCCCAAAGTATA+AGG | + | chr2_1:75666172-75666191 | None:intergenic | 35.0% | |
| !! | GTTGAAATACAAAGGCATCT+TGG | - | chr2_1:75666350-75666369 | Msa0225530:intron | 35.0% |
| ATGAAGGTTCTATTGTCCTA+TGG | - | chr2_1:75666397-75666416 | Msa0225530:CDS | 35.0% | |
| TTTATCTCCTCAACCATTGA+AGG | + | chr2_1:75666549-75666568 | None:intergenic | 35.0% | |
| ! | GAGAAGAGAGAATGGAGTTT+TGG | - | chr2_1:75664282-75664301 | Msa0225530:three_prime_UTR | 40.0% |
| !! | ATTTTTCAGATACCCTGACC+CGG | - | chr2_1:75665397-75665416 | Msa0225530:intron | 40.0% |
| AGCAAAACATACGAGTCAGT+TGG | + | chr2_1:75665425-75665444 | None:intergenic | 40.0% | |
| TGGACCATGTATGACATCAA+TGG | + | chr2_1:75665745-75665764 | None:intergenic | 40.0% | |
| TTGTCGCATCAACTTATTGG+GGG | + | chr2_1:75665786-75665805 | None:intergenic | 40.0% | |
| AAAGCAACATTCACCATGGA+AGG | + | chr2_1:75665934-75665953 | None:intergenic | 40.0% | |
| !! | TCCATGGTGAATGTTGCTTT+AGG | - | chr2_1:75665934-75665953 | Msa0225530:intron | 40.0% |
| TCCTAAAGCAACATTCACCA+TGG | + | chr2_1:75665938-75665957 | None:intergenic | 40.0% | |
| !! | ATGGTGAATGTTGCTTTAGG+AGG | - | chr2_1:75665937-75665956 | Msa0225530:intron | 40.0% |
| !! | AATGTTGCTTTAGGAGGACT+TGG | - | chr2_1:75665943-75665962 | Msa0225530:intron | 40.0% |
| CAGGGGAGATCAAAATACTT+TGG | + | chr2_1:75665981-75666000 | None:intergenic | 40.0% | |
| !! | CTGCTCTAGCCTTATACTTT+GGG | - | chr2_1:75666160-75666179 | Msa0225530:intron | 40.0% |
| GTGAGTACTATGTTTGTAGC+AGG | - | chr2_1:75666243-75666262 | Msa0225530:intron | 40.0% | |
| AGTACTATGTTTGTAGCAGG+AGG | - | chr2_1:75666246-75666265 | Msa0225530:intron | 40.0% | |
| ATTGTCCTATGGAGAGGTTT+AGG | - | chr2_1:75666408-75666427 | Msa0225530:CDS | 40.0% | |
| CTTAGAGAGACTTGATAAGC+AGG | + | chr2_1:75666477-75666496 | None:intergenic | 40.0% | |
| CTGCTTATCAAGTCTCTCTA+AGG | - | chr2_1:75666475-75666494 | Msa0225530:CDS | 40.0% | |
| CATTACTCCTTCAATGGTTG+AGG | - | chr2_1:75666539-75666558 | Msa0225530:CDS | 40.0% | |
| ! | GAGAAGAGAGAATGGAGTTT+TGG | - | chr2_1:75664282-75664301 | Msa0225530:three_prime_UTR | 40.0% |
| !! | ATTTTTCAGATACCCTGACC+CGG | - | chr2_1:75665397-75665416 | Msa0225530:intron | 40.0% |
| AGCAAAACATACGAGTCAGT+TGG | + | chr2_1:75665425-75665444 | None:intergenic | 40.0% | |
| TGGACCATGTATGACATCAA+TGG | + | chr2_1:75665745-75665764 | None:intergenic | 40.0% | |
| TTGTCGCATCAACTTATTGG+GGG | + | chr2_1:75665786-75665805 | None:intergenic | 40.0% | |
| AAAGCAACATTCACCATGGA+AGG | + | chr2_1:75665934-75665953 | None:intergenic | 40.0% | |
| !! | TCCATGGTGAATGTTGCTTT+AGG | - | chr2_1:75665934-75665953 | Msa0225530:intron | 40.0% |
| TCCTAAAGCAACATTCACCA+TGG | + | chr2_1:75665938-75665957 | None:intergenic | 40.0% | |
| !! | ATGGTGAATGTTGCTTTAGG+AGG | - | chr2_1:75665937-75665956 | Msa0225530:intron | 40.0% |
| !! | AATGTTGCTTTAGGAGGACT+TGG | - | chr2_1:75665943-75665962 | Msa0225530:intron | 40.0% |
| CAGGGGAGATCAAAATACTT+TGG | + | chr2_1:75665981-75666000 | None:intergenic | 40.0% | |
| !! | CTGCTCTAGCCTTATACTTT+GGG | - | chr2_1:75666160-75666179 | Msa0225530:intron | 40.0% |
| GTGAGTACTATGTTTGTAGC+AGG | - | chr2_1:75666243-75666262 | Msa0225530:intron | 40.0% | |
| AGTACTATGTTTGTAGCAGG+AGG | - | chr2_1:75666246-75666265 | Msa0225530:intron | 40.0% | |
| ATTGTCCTATGGAGAGGTTT+AGG | - | chr2_1:75666408-75666427 | Msa0225530:CDS | 40.0% | |
| CTTAGAGAGACTTGATAAGC+AGG | + | chr2_1:75666477-75666496 | None:intergenic | 40.0% | |
| CTGCTTATCAAGTCTCTCTA+AGG | - | chr2_1:75666475-75666494 | Msa0225530:CDS | 40.0% | |
| CATTACTCCTTCAATGGTTG+AGG | - | chr2_1:75666539-75666558 | Msa0225530:CDS | 40.0% | |
| !! | GAGTTTGTAGCTGGTGGATT+TGG | - | chr2_1:75664338-75664357 | Msa0225530:three_prime_UTR | 45.0% |
| !! | TTTGTAGCTGGTGGATTTGG+AGG | - | chr2_1:75664341-75664360 | Msa0225530:three_prime_UTR | 45.0% |
| CGTGTCATGCAACAACAATC+TGG | - | chr2_1:75664404-75664423 | Msa0225530:CDS | 45.0% | |
| GACCTACTGCTTTGTATCGT+GGG | - | chr2_1:75664474-75664493 | Msa0225530:CDS | 45.0% | |
| ATCCCACGATACAAAGCAGT+AGG | + | chr2_1:75664479-75664498 | None:intergenic | 45.0% | |
| TACTGCTTTGTATCGTGGGA+TGG | - | chr2_1:75664478-75664497 | Msa0225530:CDS | 45.0% | |
| TGAAAACCAACAGAGGCCAA+AGG | + | chr2_1:75664509-75664528 | None:intergenic | 45.0% | |
| !!! | TTTGGCCTCTGTTGGTTTTC+AGG | - | chr2_1:75664508-75664527 | Msa0225530:CDS | 45.0% |
| CCTAACCTGAAAACCAACAG+AGG | + | chr2_1:75664516-75664535 | None:intergenic | 45.0% | |
| !!! | CCTCTGTTGGTTTTCAGGTT+AGG | - | chr2_1:75664513-75664532 | Msa0225530:CDS | 45.0% |
| AATAACGAAGTGGGCAACTG+TGG | - | chr2_1:75664567-75664586 | Msa0225530:CDS | 45.0% | |
| GTGAAGTGGACACTTGTGTA+CGG | + | chr2_1:75664986-75665005 | None:intergenic | 45.0% | |
| GGCACACGGTGTGATTTAAT+TGG | + | chr2_1:75665765-75665784 | None:intergenic | 45.0% | |
| ! | ATCAACTTATTGGGGGCACA+CGG | + | chr2_1:75665779-75665798 | None:intergenic | 45.0% |
| GTCCATGTGAAGAAGTAGAG+GGG | + | chr2_1:75665909-75665928 | None:intergenic | 45.0% | |
| GGTCCATGTGAAGAAGTAGA+GGG | + | chr2_1:75665910-75665929 | None:intergenic | 45.0% | |
| AGGTCCATGTGAAGAAGTAG+AGG | + | chr2_1:75665911-75665930 | None:intergenic | 45.0% | |
| CCAAAGTATAAGGCTAGAGC+AGG | + | chr2_1:75666162-75666181 | None:intergenic | 45.0% | |
| !! | CCTGCTCTAGCCTTATACTT+TGG | - | chr2_1:75666159-75666178 | Msa0225530:intron | 45.0% |
| ACAAGAGAGAAACTTCACCC+TGG | - | chr2_1:75666195-75666214 | Msa0225530:intron | 45.0% | |
| GACAACTTTCTCTGCAACCA+GGG | + | chr2_1:75666215-75666234 | None:intergenic | 45.0% | |
| TGACAACTTTCTCTGCAACC+AGG | + | chr2_1:75666216-75666235 | None:intergenic | 45.0% | |
| ! | TTTGTAGCAGGAGGATTAGC+AGG | - | chr2_1:75666255-75666274 | Msa0225530:intron | 45.0% |
| ! | TTGTAGCAGGAGGATTAGCA+GGG | - | chr2_1:75666256-75666275 | Msa0225530:intron | 45.0% |
| GATTAGCAGGGATAGCAAGT+TGG | - | chr2_1:75666268-75666287 | Msa0225530:intron | 45.0% | |
| GGTTCTATTGTCCTATGGAG+AGG | - | chr2_1:75666402-75666421 | Msa0225530:CDS | 45.0% | |
| TTGCTCCTAAACCTCTCCAT+AGG | + | chr2_1:75666416-75666435 | None:intergenic | 45.0% | |
| !! | GAGTTTGTAGCTGGTGGATT+TGG | - | chr2_1:75664338-75664357 | Msa0225530:three_prime_UTR | 45.0% |
| !! | TTTGTAGCTGGTGGATTTGG+AGG | - | chr2_1:75664341-75664360 | Msa0225530:three_prime_UTR | 45.0% |
| CGTGTCATGCAACAACAATC+TGG | - | chr2_1:75664404-75664423 | Msa0225530:CDS | 45.0% | |
| GACCTACTGCTTTGTATCGT+GGG | - | chr2_1:75664474-75664493 | Msa0225530:CDS | 45.0% | |
| ATCCCACGATACAAAGCAGT+AGG | + | chr2_1:75664479-75664498 | None:intergenic | 45.0% | |
| TACTGCTTTGTATCGTGGGA+TGG | - | chr2_1:75664478-75664497 | Msa0225530:CDS | 45.0% | |
| TGAAAACCAACAGAGGCCAA+AGG | + | chr2_1:75664509-75664528 | None:intergenic | 45.0% | |
| !!! | TTTGGCCTCTGTTGGTTTTC+AGG | - | chr2_1:75664508-75664527 | Msa0225530:CDS | 45.0% |
| CCTAACCTGAAAACCAACAG+AGG | + | chr2_1:75664516-75664535 | None:intergenic | 45.0% | |
| !!! | CCTCTGTTGGTTTTCAGGTT+AGG | - | chr2_1:75664513-75664532 | Msa0225530:CDS | 45.0% |
| AATAACGAAGTGGGCAACTG+TGG | - | chr2_1:75664567-75664586 | Msa0225530:CDS | 45.0% | |
| GTGAAGTGGACACTTGTGTA+CGG | + | chr2_1:75664986-75665005 | None:intergenic | 45.0% | |
| GGCACACGGTGTGATTTAAT+TGG | + | chr2_1:75665765-75665784 | None:intergenic | 45.0% | |
| ! | ATCAACTTATTGGGGGCACA+CGG | + | chr2_1:75665779-75665798 | None:intergenic | 45.0% |
| GTCCATGTGAAGAAGTAGAG+GGG | + | chr2_1:75665909-75665928 | None:intergenic | 45.0% | |
| GGTCCATGTGAAGAAGTAGA+GGG | + | chr2_1:75665910-75665929 | None:intergenic | 45.0% | |
| AGGTCCATGTGAAGAAGTAG+AGG | + | chr2_1:75665911-75665930 | None:intergenic | 45.0% | |
| CCAAAGTATAAGGCTAGAGC+AGG | + | chr2_1:75666162-75666181 | None:intergenic | 45.0% | |
| !! | CCTGCTCTAGCCTTATACTT+TGG | - | chr2_1:75666159-75666178 | Msa0225530:intron | 45.0% |
| ACAAGAGAGAAACTTCACCC+TGG | - | chr2_1:75666195-75666214 | Msa0225530:intron | 45.0% | |
| GACAACTTTCTCTGCAACCA+GGG | + | chr2_1:75666215-75666234 | None:intergenic | 45.0% | |
| TGACAACTTTCTCTGCAACC+AGG | + | chr2_1:75666216-75666235 | None:intergenic | 45.0% | |
| ! | TTTGTAGCAGGAGGATTAGC+AGG | - | chr2_1:75666255-75666274 | Msa0225530:intron | 45.0% |
| ! | TTGTAGCAGGAGGATTAGCA+GGG | - | chr2_1:75666256-75666275 | Msa0225530:intron | 45.0% |
| GATTAGCAGGGATAGCAAGT+TGG | - | chr2_1:75666268-75666287 | Msa0225530:intron | 45.0% | |
| GGTTCTATTGTCCTATGGAG+AGG | - | chr2_1:75666402-75666421 | Msa0225530:CDS | 45.0% | |
| TTGCTCCTAAACCTCTCCAT+AGG | + | chr2_1:75666416-75666435 | None:intergenic | 45.0% | |
| !!! | AAAAAATATGTTTATTTTTA+TGG | - | chr2_1:75665830-75665849 | Msa0225530:intron | 5.0% |
| !!! | AAAAAATATGTTTATTTTTA+TGG | - | chr2_1:75665830-75665849 | Msa0225530:intron | 5.0% |
| TTGGGGAGAGAGTTTGTAGC+TGG | - | chr2_1:75664329-75664348 | Msa0225530:three_prime_UTR | 50.0% | |
| GGACCTACTGCTTTGTATCG+TGG | - | chr2_1:75664473-75664492 | Msa0225530:CDS | 50.0% | |
| ! | ACATACGAGTCAGTTGGCTC+CGG | + | chr2_1:75665419-75665438 | None:intergenic | 50.0% |
| TTCACATGGACCTCCTTCCA+TGG | - | chr2_1:75665918-75665937 | Msa0225530:intron | 50.0% | |
| GCAACATTCACCATGGAAGG+AGG | + | chr2_1:75665931-75665950 | None:intergenic | 50.0% | |
| TGGAAAAATGAGGGCCTTCG+CGG | - | chr2_1:75666096-75666115 | Msa0225530:intron | 50.0% | |
| ATCCTCGATAAATGCCGCGA+AGG | + | chr2_1:75666113-75666132 | None:intergenic | 50.0% | |
| CGCGGCATTTATCGAGGATT+TGG | - | chr2_1:75666114-75666133 | Msa0225530:intron | 50.0% | |
| TTGGGGAGAGAGTTTGTAGC+TGG | - | chr2_1:75664329-75664348 | Msa0225530:three_prime_UTR | 50.0% | |
| GGACCTACTGCTTTGTATCG+TGG | - | chr2_1:75664473-75664492 | Msa0225530:CDS | 50.0% | |
| ! | ACATACGAGTCAGTTGGCTC+CGG | + | chr2_1:75665419-75665438 | None:intergenic | 50.0% |
| TTCACATGGACCTCCTTCCA+TGG | - | chr2_1:75665918-75665937 | Msa0225530:intron | 50.0% | |
| GCAACATTCACCATGGAAGG+AGG | + | chr2_1:75665931-75665950 | None:intergenic | 50.0% | |
| TGGAAAAATGAGGGCCTTCG+CGG | - | chr2_1:75666096-75666115 | Msa0225530:intron | 50.0% | |
| ATCCTCGATAAATGCCGCGA+AGG | + | chr2_1:75666113-75666132 | None:intergenic | 50.0% | |
| CGCGGCATTTATCGAGGATT+TGG | - | chr2_1:75666114-75666133 | Msa0225530:intron | 50.0% | |
| GGGAGAGAGTTTGTAGCTGG+TGG | - | chr2_1:75664332-75664351 | Msa0225530:three_prime_UTR | 55.0% | |
| TCGTGGGATGGCTGTTCCTT+TGG | - | chr2_1:75664490-75664509 | Msa0225530:CDS | 55.0% | |
| GCTGTTCCTTTGGCCTCTGT+TGG | - | chr2_1:75664500-75664519 | Msa0225530:CDS | 55.0% | |
| AGAGGGATCAGGGAGATCCA+AGG | + | chr2_1:75665329-75665348 | None:intergenic | 55.0% | |
| ! | CATACGAGTCAGTTGGCTCC+GGG | + | chr2_1:75665418-75665437 | None:intergenic | 55.0% |
| GGCCCCTCTACTTCTTCACA+TGG | - | chr2_1:75665904-75665923 | Msa0225530:intron | 55.0% | |
| !! | GCTTTAGGAGGACTTGGTGC+AGG | - | chr2_1:75665949-75665968 | Msa0225530:intron | 55.0% |
| GGGAGAGAGTTTGTAGCTGG+TGG | - | chr2_1:75664332-75664351 | Msa0225530:three_prime_UTR | 55.0% | |
| TCGTGGGATGGCTGTTCCTT+TGG | - | chr2_1:75664490-75664509 | Msa0225530:CDS | 55.0% | |
| GCTGTTCCTTTGGCCTCTGT+TGG | - | chr2_1:75664500-75664519 | Msa0225530:CDS | 55.0% | |
| AGAGGGATCAGGGAGATCCA+AGG | + | chr2_1:75665329-75665348 | None:intergenic | 55.0% | |
| ! | CATACGAGTCAGTTGGCTCC+GGG | + | chr2_1:75665418-75665437 | None:intergenic | 55.0% |
| GGCCCCTCTACTTCTTCACA+TGG | - | chr2_1:75665904-75665923 | Msa0225530:intron | 55.0% | |
| !! | GCTTTAGGAGGACTTGGTGC+AGG | - | chr2_1:75665949-75665968 | Msa0225530:intron | 55.0% |
| ! | GGTGGATTTGGAGGCACAGC+AGG | - | chr2_1:75664350-75664369 | Msa0225530:three_prime_UTR | 60.0% |
| ! | AGTCAGTTGGCTCCGGGTCA+GGG | + | chr2_1:75665412-75665431 | None:intergenic | 60.0% |
| GGCCTTCGCGGCATTTATCG+AGG | - | chr2_1:75666108-75666127 | Msa0225530:intron | 60.0% | |
| ! | GGTGGATTTGGAGGCACAGC+AGG | - | chr2_1:75664350-75664369 | Msa0225530:three_prime_UTR | 60.0% |
| ! | AGTCAGTTGGCTCCGGGTCA+GGG | + | chr2_1:75665412-75665431 | None:intergenic | 60.0% |
| GGCCTTCGCGGCATTTATCG+AGG | - | chr2_1:75666108-75666127 | Msa0225530:intron | 60.0% | |
| ! | GAGTCAGTTGGCTCCGGGTC+AGG | + | chr2_1:75665413-75665432 | None:intergenic | 65.0% |
| ! | GAGTCAGTTGGCTCCGGGTC+AGG | + | chr2_1:75665413-75665432 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 75664240 | 75666665 | 75664240 | ID=Msa0225530;Name=Msa0225530 |
| chr2_1 | mRNA | 75664240 | 75666665 | 75664240 | ID=Msa0225530-mRNA-1;Parent=Msa0225530;Name=Msa0225530-mRNA-1;_AED=0.02;_eAED=0.02;_QI=53|1|1|1|1|1|2|150|297 |
| chr2_1 | exon | 75664240 | 75665046 | 75664240 | ID=Msa0225530-mRNA-1:exon:22673;Parent=Msa0225530-mRNA-1 |
| chr2_1 | exon | 75666376 | 75666665 | 75666376 | ID=Msa0225530-mRNA-1:exon:22672;Parent=Msa0225530-mRNA-1 |
| chr2_1 | five_prime_UTR | 75666613 | 75666665 | 75666613 | ID=Msa0225530-mRNA-1:five_prime_utr;Parent=Msa0225530-mRNA-1 |
| chr2_1 | CDS | 75666376 | 75666612 | 75666376 | ID=Msa0225530-mRNA-1:cds;Parent=Msa0225530-mRNA-1 |
| chr2_1 | CDS | 75664390 | 75665046 | 75664390 | ID=Msa0225530-mRNA-1:cds;Parent=Msa0225530-mRNA-1 |
| chr2_1 | three_prime_UTR | 75664240 | 75664389 | 75664240 | ID=Msa0225530-mRNA-1:three_prime_utr;Parent=Msa0225530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
