AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0563230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563230 MtrunA17_Chr8g0377101 97.052 916 27 0 1 916 1 916 0.0 1838
Msa0563230 MtrunA17_Chr8g0344201 53.673 844 379 8 78 915 89 926 0.0 942
Msa0563230 MtrunA17_Chr3g0118651 48.084 809 401 10 115 916 107 903 0.0 800
Msa0563230 MtrunA17_Chr3g0118641 47.551 837 418 12 89 916 78 902 0.0 790
Msa0563230 MtrunA17_Chr4g0047281 47.393 844 406 13 79 915 82 894 0.0 775
Msa0563230 MtrunA17_Chr3g0118621 46.181 864 449 9 59 916 12 865 0.0 758
Msa0563230 MtrunA17_Chr4g0033171 50.780 705 333 8 217 916 30 725 0.0 745
Msa0563230 MtrunA17_Chr1g0191921 43.793 870 446 17 69 916 10 858 0.0 706
Msa0563230 MtrunA17_Chr7g0272791 43.560 854 448 15 83 916 28 867 0.0 700
Msa0563230 MtrunA17_Chr2g0329911 44.203 828 434 15 100 916 51 861 0.0 688
Msa0563230 MtrunA17_Chr8g0343021 44.322 819 429 14 109 916 62 864 0.0 687
Msa0563230 MtrunA17_Chr2g0329901 45.177 819 421 16 109 916 62 863 0.0 684
Msa0563230 MtrunA17_Chr1g0205611 42.276 861 460 17 80 916 9 856 0.0 682
Msa0563230 MtrunA17_Chr8g0343031 44.336 821 426 15 109 916 63 865 0.0 681
Msa0563230 MtrunA17_Chr8g0342881 42.604 845 448 16 89 916 32 856 0.0 672
Msa0563230 MtrunA17_Chr3g0120071 44.015 827 420 16 109 916 56 858 0.0 666
Msa0563230 MtrunA17_Chr5g0406871 44.859 778 397 15 152 916 109 867 0.0 658
Msa0563230 MtrunA17_Chr8g0342891 44.243 773 410 12 152 916 102 861 0.0 646
Msa0563230 MtrunA17_Chr8g0342921 42.875 821 440 15 109 916 65 869 0.0 644
Msa0563230 MtrunA17_Chr8g0344211 41.818 825 443 16 109 916 64 868 0.0 642
Msa0563230 MtrunA17_Chr8g0342971 43.959 778 406 14 152 916 110 870 0.0 638
Msa0563230 MtrunA17_Chr8g0343011 42.125 819 444 15 109 916 66 865 0.0 632
Msa0563230 MtrunA17_Chr8g0342931 43.864 766 403 12 162 916 1 750 0.0 626
Msa0563230 MtrunA17_Chr8g0342951 42.909 825 434 16 109 916 64 868 0.0 623
Msa0563230 MtrunA17_Chr8g0342901 41.560 782 406 13 145 916 88 828 0.0 603
Msa0563230 MtrunA17_Chr8g0342981 40.580 828 432 18 110 916 35 823 0.0 581
Msa0563230 MtrunA17_Chr8g0338451 40.551 762 427 13 149 899 104 850 0.0 558
Msa0563230 MtrunA17_Chr8g0343001 38.923 817 428 18 113 916 49 807 0.0 543
Msa0563230 MtrunA17_Chr8g0342991 37.990 816 437 17 113 916 49 807 0.0 543
Msa0563230 MtrunA17_Chr6g0471951 39.286 504 263 7 380 879 18 482 1.39e-118 370
Msa0563230 MtrunA17_Chr8g0344241 44.140 401 212 4 522 916 67 461 2.54e-113 355
Msa0563230 MtrunA17_Chr7g0218231 61.345 119 46 0 566 684 14 132 3.02e-48 167
Msa0563230 MtrunA17_Chr6g0468081 60.674 89 35 0 596 684 1 89 8.38e-33 122
Msa0563230 MtrunA17_Chr4g0047271 50.000 92 45 1 824 915 1 91 5.37e-23 94.0
Msa0563230 MtrunA17_Chr4g0033181 31.646 158 98 4 73 223 63 217 1.44e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563230 AT1G67560.1 64.114 914 309 9 10 916 16 917 0.0 1181
Msa0563230 AT1G72520.1 54.923 843 370 7 78 916 90 926 0.0 955
Msa0563230 AT1G17420.1 52.088 910 414 10 23 916 16 919 0.0 942
Msa0563230 AT3G45140.1 46.897 838 424 11 86 916 73 896 0.0 786
Msa0563230 AT3G45140.2 49.279 763 374 8 158 916 1 754 0.0 773
Msa0563230 AT1G55020.1 43.950 876 451 17 62 916 3 859 0.0 724
Msa0563230 AT3G22400.1 41.618 865 467 16 75 916 37 886 0.0 669

Find 251 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTGTTATTGCTGATTC+TGG 0.123296 4_1:+63540548 None:intergenic
TTCCCCTGACGAAGAGTATT+TGG 0.159442 4_1:-63538770 Msa0563230:CDS
CTAACAAGTTCCTCTTTATC+AGG 0.169266 4_1:+63541731 None:intergenic
AGAATTTACTAAACAATTTC+AGG 0.178920 4_1:+63538701 None:intergenic
TTATATTGATGGTGTTAATT+TGG 0.191367 4_1:-63541324 Msa0563230:CDS
CGCCATAGTGGCTGCAAGTT+TGG 0.215210 4_1:+63541391 None:intergenic
TTCAATAGCTCAATATTTAC+TGG 0.223964 4_1:+63540695 None:intergenic
AGATTCTACCCATTCTTTAA+TGG 0.248411 4_1:+63539182 None:intergenic
GCTCGGCAAAGTTTAATAAA+TGG 0.270473 4_1:-63539830 Msa0563230:CDS
GGAGGATGATTTCCGATAAA+TGG 0.273826 4_1:+63542208 None:intergenic
TATATTGATGGTGTTAATTT+GGG 0.275468 4_1:-63541323 Msa0563230:CDS
ACCAATGATTTACTAGTTGA+TGG 0.293539 4_1:+63540105 None:intergenic
TCATCTCGCGGCACATAAAC+AGG 0.295508 4_1:+63541485 None:intergenic
TTCAAAGGAGTTCCATTTAT+CGG 0.310252 4_1:-63542220 Msa0563230:CDS
CTCTTCCGGCAGATCTTATT+CGG 0.323141 4_1:-63539712 Msa0563230:CDS
CATTCCTTTCAAGTGTTTCT+CGG 0.335053 4_1:-63541360 Msa0563230:CDS
ATTGACAAGCTTTATATTGA+TGG 0.336229 4_1:-63541335 Msa0563230:CDS
GCCATAGTGGCTGCAAGTTT+GGG 0.336382 4_1:+63541392 None:intergenic
TCATACTTACGACAATCATA+TGG 0.339367 4_1:-63539011 Msa0563230:CDS
TGTGTTAGCTGGAAAGAAAA+TGG 0.341273 4_1:+63542167 None:intergenic
AATTTCGGACAATACCCTTT+TGG 0.341971 4_1:-63538961 Msa0563230:CDS
TAGTGTGGTTGAGGAGTTTG+AGG 0.343973 4_1:-63545771 Msa0563230:CDS
TTGGGAGATGAAGAGAATAA+AGG 0.344498 4_1:-63541305 Msa0563230:CDS
TCCTCTTTGGTATCTAGTTT+AGG 0.345137 4_1:+63539042 None:intergenic
AATTATAAATGCAAGAAATA+AGG 0.345568 4_1:-63538653 Msa0563230:CDS
ATGAAACAGGTCTTCAGTTC+TGG 0.346773 4_1:-63541251 Msa0563230:CDS
ATGCCACAGCACACTGGATT+TGG 0.347347 4_1:-63540169 Msa0563230:CDS
TCTCCTCCGGTGCCTCTTAT+CGG 0.348322 4_1:+63545994 None:intergenic
GACATCCCAGCTATTGTAAA+AGG 0.352857 4_1:-63541209 Msa0563230:intron
ACAACATATGGAATGTTTGA+TGG 0.357193 4_1:+63542315 None:intergenic
TACCAAAGTAATGGCTGTTC+AGG 0.357660 4_1:-63538809 Msa0563230:CDS
CAACATGCTGCTATAAATTT+CGG 0.360621 4_1:-63538976 Msa0563230:CDS
AGATAGATTTGCTTGGTTGC+GGG 0.363128 4_1:-63540756 Msa0563230:CDS
AAACTAGATCCAACTATCTA+TGG 0.366904 4_1:-63540575 Msa0563230:CDS
TGACTCATTTGCATAATCAT+TGG 0.376857 4_1:-63538741 Msa0563230:CDS
CGATGCAATTGAATTTGATT+CGG 0.377861 4_1:+63539140 None:intergenic
ATCATCCTCCACGGCTTCAC+TGG 0.380490 4_1:-63542195 Msa0563230:CDS
GACTCCACGACCAGTTGCTC+CGG 0.383763 4_1:+63538561 None:intergenic
GAGCATGTGGAGATTTGATA+TGG 0.388119 4_1:-63539738 Msa0563230:CDS
ACAATCATATGGGTTGCTTC+AGG 0.388863 4_1:-63539000 Msa0563230:CDS
TTCACAGTGCCAAGTGACTT+TGG 0.393066 4_1:-63542276 Msa0563230:CDS
GGATGTAGCAACTTGTAAAT+AGG 0.393191 4_1:+63539887 None:intergenic
TGATTTCACTCCACCACTCT+TGG 0.397874 4_1:+63539106 None:intergenic
GAACTCCTTTGAACGAAGAT+TGG 0.398217 4_1:+63542230 None:intergenic
TATCCTCGTCGCTGTAGAAC+CGG 0.398710 4_1:-63541680 Msa0563230:CDS
ATTTGATATGGAGTCTCTTC+CGG 0.403194 4_1:-63539726 Msa0563230:CDS
GTTCTACAGCGACGAGGATA+AGG 0.403861 4_1:+63541683 None:intergenic
TGGGAGATGAAGAGAATAAA+GGG 0.405860 4_1:-63541304 Msa0563230:CDS
CTGCAGATGGACTTCTAATC+TGG 0.406327 4_1:-63539209 Msa0563230:CDS
TATGAAAGATAGGTCCTCTT+TGG 0.407757 4_1:+63539029 None:intergenic
TTGAATATGATTCTACTTTG+AGG 0.408949 4_1:+63542120 None:intergenic
GCAGAGTATTCCACAACATA+TGG 0.411374 4_1:+63542303 None:intergenic
ACCCAAACTTGCAGCCACTA+TGG 0.412388 4_1:-63541393 Msa0563230:CDS
TCCCCTGACGAAGAGTATTT+GGG 0.416587 4_1:-63538769 Msa0563230:CDS
TGAATATGATTCTACTTTGA+GGG 0.420439 4_1:+63542121 None:intergenic
TTGTCAGGACCCGGAGCAAC+TGG 0.420733 4_1:-63538571 Msa0563230:CDS
TGAGGAGTTTGAGGATCAGT+TGG 0.424110 4_1:-63545762 Msa0563230:CDS
CTATGAGTAGCAATTATATA+CGG 0.426664 4_1:+63539929 None:intergenic
AGCAATAACAAAGGAACTAC+TGG 0.430247 4_1:-63540540 Msa0563230:CDS
GTTGAGTAGGCAATGATGAT+AGG 0.431532 4_1:+63538839 None:intergenic
GAGATAGATTTGCTTGGTTG+CGG 0.431829 4_1:-63540757 Msa0563230:CDS
TATGGAATGTTTGATGGCTT+CGG 0.432986 4_1:+63542321 None:intergenic
TTTGCAAGGCAAGCCTTAGC+TGG 0.434446 4_1:-63540725 Msa0563230:CDS
GATCATATAGATATACTGTT+GGG 0.436421 4_1:+63538538 None:intergenic
TAGTCCTGGAAAATATGCTT+TGG 0.437847 4_1:-63539783 Msa0563230:CDS
TGGTGGAATAAGCTTGGAAA+AGG 0.441048 4_1:-63540507 Msa0563230:intron
AAGCGGTGCTGCCCAAGAAC+AGG 0.441538 4_1:-63541810 Msa0563230:CDS
AGGGTTGCCTAACTCATTGT+AGG 0.442421 4_1:+63541751 None:intergenic
TCTGGTCTGCCATTAAAGAA+TGG 0.443639 4_1:-63539191 Msa0563230:CDS
CCAAGTTTGAAAAGTAGAAC+TGG 0.445657 4_1:-63538628 Msa0563230:CDS
TCCATCAACTAGTAAATCAT+TGG 0.446490 4_1:-63540106 Msa0563230:intron
GGACCCGGAGCAACTGGTCG+TGG 0.447142 4_1:-63538565 Msa0563230:CDS
AGAAGTCCATCTGCAGCATA+AGG 0.447808 4_1:+63539216 None:intergenic
GTGGAGTGAAATCAAGTGTA+AGG 0.450222 4_1:-63539097 Msa0563230:CDS
ATTGATCAATTCGTTTATGC+TGG 0.453876 4_1:-63538332 Msa0563230:three_prime_UTR
AAAGGAAGCAAAAGTTCATA+AGG 0.455254 4_1:+63538592 None:intergenic
CATACTTACGACAATCATAT+GGG 0.460891 4_1:-63539010 Msa0563230:CDS
TGACCCAAATACTCTTCGTC+AGG 0.461331 4_1:+63538766 None:intergenic
GAGTTCATCTTCTTGATGAA+TGG 0.462879 4_1:+63540335 None:intergenic
TTCATCAATGGTGTTGGTCA+AGG 0.463683 4_1:-63545734 Msa0563230:CDS
AGAGAAAGCTCAATAGCTAT+AGG 0.463940 4_1:+63540245 None:intergenic
TTTACACCACAGGGCATTGA+AGG 0.466878 4_1:+63539258 None:intergenic
TCCATTGTATAGCGCGTATG+AGG 0.467969 4_1:+63539866 None:intergenic
CATTACCAATCTTCGTTCAA+AGG 0.468216 4_1:-63542235 Msa0563230:CDS
CTCATGAGGGTAGGACGGTT+AGG 0.468763 4_1:+63538928 None:intergenic
GAACTTGTTAGACCAGTCAT+TGG 0.470623 4_1:-63541719 Msa0563230:CDS
CTGGTCTGCCATTAAAGAAT+GGG 0.472539 4_1:-63539190 Msa0563230:CDS
GGATCTAGTTTGCTGCGGAT+TGG 0.473071 4_1:+63540587 None:intergenic
AATGAAAGTTAGTGTGGTTG+AGG 0.473822 4_1:-63545780 Msa0563230:CDS
AGTAAATATTGAGCTATTGA+AGG 0.476774 4_1:-63540693 Msa0563230:intron
TAATCATTGGATCAATGATC+AGG 0.480482 4_1:-63538728 Msa0563230:CDS
TTGGTAGCTTGAAGTTGAGT+AGG 0.480940 4_1:+63538826 None:intergenic
TACTAGACTTGAGGAGATAG+AGG 0.484216 4_1:-63538677 Msa0563230:CDS
TTAGGCACATATCCTCCAAA+AGG 0.484226 4_1:+63538946 None:intergenic
TCGATCAATTTCGATTGCCT+TGG 0.485249 4_1:-63538517 Msa0563230:three_prime_UTR
TTGCTCACTTTGCTGTCCAC+CGG 0.486780 4_1:+63545887 None:intergenic
CAGTTGGAGTATTTCATCAA+TGG 0.487178 4_1:-63545746 Msa0563230:CDS
GGTGGGAAAAGTGATGAAAC+AGG 0.490922 4_1:-63541264 Msa0563230:CDS
GAACTACTGGAGCAAGAACT+TGG 0.493456 4_1:-63540527 Msa0563230:CDS
ATAAACGAATTGATCAATAT+CGG 0.493904 4_1:+63538337 None:intergenic
GGAGCGAGTAGGAGGTCTTC+CGG 0.493994 4_1:+63541661 None:intergenic
AAACAGGATGCATTTGCTGC+TGG 0.495438 4_1:-63541446 Msa0563230:CDS
TTGCTTCCTTTGTCAGGACC+CGG 0.497544 4_1:-63538580 Msa0563230:CDS
CGAATCAAATTCAATTGCAT+CGG 0.498807 4_1:-63539139 Msa0563230:CDS
GAGGCATAAGCTTTCCTCTC+GGG 0.499830 4_1:+63540308 None:intergenic
TTGTAATGAAGAGAATCGTC+CGG 0.500870 4_1:+63540285 None:intergenic
GTGTTAGCTGGAAAGAAAAT+GGG 0.502615 4_1:+63542168 None:intergenic
GCAAAGTTTAATAAATGGAG+GGG 0.503263 4_1:-63539825 Msa0563230:CDS
CTCTCATGATCTCCAATGAC+TGG 0.509818 4_1:+63541707 None:intergenic
CACTTCAAATCATAAGTTTG+AGG 0.511119 4_1:+63537949 None:intergenic
TACTGGATTGACTCCAGCTA+AGG 0.511465 4_1:+63540712 None:intergenic
GAGTATTTCATCAATGGTGT+TGG 0.511662 4_1:-63545740 Msa0563230:CDS
ATAATAGAAAATCTCTTGGT+GGG 0.512813 4_1:-63541281 Msa0563230:CDS
TTGTTATTGCTGATTCTGGA+GGG 0.513518 4_1:+63540552 None:intergenic
TATGCTCCCTACAATGAGTT+AGG 0.514068 4_1:-63541758 Msa0563230:CDS
GAATGAATCCATGTGTTAGC+TGG 0.514422 4_1:+63542156 None:intergenic
AGAACTTGGTGGAATAAGCT+TGG 0.516371 4_1:-63540513 Msa0563230:CDS
CAAGATCTATGGTCAAGGTA+GGG 0.517590 4_1:-63538285 Msa0563230:three_prime_UTR
TTGTCGTAAGTATGAAAGAT+AGG 0.519427 4_1:+63539019 None:intergenic
CGCGGCACATAAACAGGGTG+TGG 0.521515 4_1:+63541491 None:intergenic
GTCCTGAACAGCCATTACTT+TGG 0.521910 4_1:+63538807 None:intergenic
CGTCGGTGTTCTCCGATAAG+AGG 0.523684 4_1:-63546006 Msa0563230:CDS
ATTCTCTTCATTACAAAGGC+CGG 0.525411 4_1:-63540278 Msa0563230:CDS
CAAGACTACGACGTCGTCTC+CGG 0.526468 4_1:-63545906 Msa0563230:CDS
TCATCAATGGTGTTGGTCAA+GGG 0.527017 4_1:-63545733 Msa0563230:CDS
AGGGATAATAGAAAATCTCT+TGG 0.530957 4_1:-63541285 Msa0563230:CDS
TACCTCCGAATAAGATCTGC+CGG 0.531659 4_1:+63539707 None:intergenic
GAAGTCCATCTGCAGCATAA+GGG 0.532536 4_1:+63539217 None:intergenic
ACTCCACGACCAGTTGCTCC+GGG 0.533633 4_1:+63538562 None:intergenic
ATCAAACATTCCATATGTTG+TGG 0.534612 4_1:-63542313 Msa0563230:CDS
CGATCATATAGATATACTGT+TGG 0.534665 4_1:+63538537 None:intergenic
CATGTTAGCTCAAATGATGC+TGG 0.535268 4_1:-63540131 Msa0563230:CDS
GTTAGGCAACCCTGATAAAG+AGG 0.537690 4_1:-63541741 Msa0563230:CDS
CGTCGAAGATCTTTGATACC+AGG 0.540574 4_1:+63541857 None:intergenic
TCTGGAGGGCCATAGATAGT+TGG 0.541049 4_1:+63540566 None:intergenic
GAATTGCATCTCCAAGGGGT+TGG 0.541143 4_1:+63538155 None:intergenic
TAACAAGTTCCTCTTTATCA+GGG 0.541380 4_1:+63541732 None:intergenic
CGGAGAACACCGACGGCGAT+CGG 0.542880 4_1:+63546014 None:intergenic
TTGAAAAGTAGAACTGGTGC+AGG 0.545990 4_1:-63538622 Msa0563230:CDS
ACAAGATCTATGGTCAAGGT+AGG 0.546021 4_1:-63538286 Msa0563230:three_prime_UTR
CATGACTTATATGCGACATA+TGG 0.549105 4_1:+63538193 None:intergenic
GATAATAGAAAATCTCTTGG+TGG 0.550624 4_1:-63541282 Msa0563230:CDS
ACAAAAGAAATGAACCTTGG+TGG 0.550976 4_1:-63539065 Msa0563230:CDS
TAAGAGGAATTGCATCTCCA+AGG 0.553093 4_1:+63538149 None:intergenic
AAGATCTATGGTCAAGGTAG+GGG 0.553229 4_1:-63538284 Msa0563230:three_prime_UTR
ACCGTGAAATGATTCTCCTC+CGG 0.555957 4_1:+63545981 None:intergenic
TAAATTCTCTACTAGACTTG+AGG 0.557721 4_1:-63538686 Msa0563230:CDS
TTACAGGAGATAGATTTGCT+TGG 0.559693 4_1:-63540763 Msa0563230:intron
TCCTCATACGCGCTATACAA+TGG 0.560220 4_1:-63539867 Msa0563230:CDS
TTGGTAATGAGAATAGCAGC+TGG 0.560990 4_1:+63542249 None:intergenic
TTGCTAAGCACAAGGGGAAG+CGG 0.561266 4_1:-63541827 Msa0563230:CDS
TTTGTTATTGCTGATTCTGG+AGG 0.561343 4_1:+63540551 None:intergenic
AGAGGAAAGCTTATGCCTCC+CGG 0.561811 4_1:-63540304 Msa0563230:CDS
AAAGAAAATGAAAGTTAGTG+TGG 0.562354 4_1:-63545786 Msa0563230:CDS
AAGCAACGGTGAAATGATAG+AGG 0.564793 4_1:-63545831 Msa0563230:CDS
GGAGGCATAAGCTTTCCTCT+CGG 0.565442 4_1:+63540307 None:intergenic
GACTACCCTTATGCTGCAGA+TGG 0.565485 4_1:-63539222 Msa0563230:CDS
AAGAGGAATTGCATCTCCAA+GGG 0.565612 4_1:+63538150 None:intergenic
CGGCAAAGTTTAATAAATGG+AGG 0.565618 4_1:-63539827 Msa0563230:CDS
TGTAATGAAGAGAATCGTCC+GGG 0.566537 4_1:+63540286 None:intergenic
TCCAGTGTGCTGTGGCATCA+TGG 0.566754 4_1:+63540174 None:intergenic
TATCTAACAAATGAGATATG+TGG 0.567465 4_1:+63538003 None:intergenic
GTTAAGGACTCATGCATGCA+TGG 0.567574 4_1:-63539954 Msa0563230:CDS
ACTTCAAGCTACCAAAGTAA+TGG 0.567833 4_1:-63538818 Msa0563230:CDS
GCTTCACTAAGCCAACCCCT+TGG 0.569548 4_1:-63538166 Msa0563230:three_prime_UTR
TGCGGGACAACGAATTTGCA+AGG 0.570627 4_1:-63540739 Msa0563230:CDS
TGGGTCCTCCAGTGAAGCCG+TGG 0.572006 4_1:+63542187 None:intergenic
ATACCAGGTGGTGTTTGTGA+TGG 0.574236 4_1:+63541872 None:intergenic
GGAAGACCTCCTACTCGCTC+CGG 0.576419 4_1:-63541659 Msa0563230:intron
GAATGTGCTTTCCAGGGGCA+TGG 0.578236 4_1:-63539292 Msa0563230:intron
TGGAATCTTACGTAGGAGGT+TGG 0.578287 4_1:-63542347 Msa0563230:CDS
ACCGGAGGAGAATCATTTCA+CGG 0.579496 4_1:-63545982 Msa0563230:CDS
GGGTTGCCTAACTCATTGTA+GGG 0.579957 4_1:+63541752 None:intergenic
ATCCTCCACGGCTTCACTGG+AGG 0.580284 4_1:-63542192 Msa0563230:CDS
TCATTTCACGGTCATCTGAA+CGG 0.584499 4_1:-63545970 Msa0563230:CDS
TCGAGTGGTGGCAGAAGCAA+CGG 0.588302 4_1:-63545845 Msa0563230:CDS
AGCTATAGGACGCAGAACAC+CGG 0.590530 4_1:+63540259 None:intergenic
TGGAAATTAATGCACTTGCT+CGG 0.591105 4_1:-63539847 Msa0563230:CDS
GGCAAAGTTTAATAAATGGA+GGG 0.591198 4_1:-63539826 Msa0563230:CDS
TAGGCACATATCCTCCAAAA+GGG 0.592242 4_1:+63538947 None:intergenic
GTTACTCCTCCGATCGCCGT+CGG 0.593763 4_1:-63546023 Msa0563230:CDS
GTTAGTGAACTCATAGACCC+TGG 0.596456 4_1:-63545695 Msa0563230:intron
ACTCTACCGGAGCGAGTAGG+AGG 0.596562 4_1:+63541653 None:intergenic
GACGGCGATCGGAGGAGTAA+CGG 0.598155 4_1:+63546025 None:intergenic
CTTGTGCAAAATATACATGA+AGG 0.598263 4_1:+63538304 None:intergenic
GACTACGACGTCGTCTCCGG+TGG 0.600534 4_1:-63545903 Msa0563230:CDS
CAAGTTATATTATAATGCCA+AGG 0.600956 4_1:+63538500 None:intergenic
TTTACACTGACAGGCTATGG+AGG 0.600987 4_1:-63540399 Msa0563230:intron
CAAGTTTGGGTATGAGATTG+TGG 0.602086 4_1:+63541405 None:intergenic
GACGATTCTCTTCATTACAA+AGG 0.603810 4_1:-63540282 Msa0563230:CDS
CTGACAAAAGAAATGAACCT+TGG 0.604053 4_1:-63539068 Msa0563230:CDS
TGGTAATGAGAATAGCAGCT+GGG 0.604515 4_1:+63542250 None:intergenic
GCCATGATGCCACAGCACAC+TGG 0.604888 4_1:-63540175 Msa0563230:CDS
TGCGGCGAAGTAAGTGTCTG+AGG 0.607972 4_1:+63540221 None:intergenic
TTGCACAAGATCTATGGTCA+AGG 0.609401 4_1:-63538290 Msa0563230:three_prime_UTR
CAAAGTTTAATAAATGGAGG+GGG 0.611294 4_1:-63539824 Msa0563230:CDS
TTACCATCACAAACACCACC+TGG 0.612280 4_1:-63541875 Msa0563230:CDS
AGCGTGGAATCTTACGTAGG+AGG 0.612694 4_1:-63542351 Msa0563230:CDS
TGTTCTCCGATAAGAGGCAC+CGG 0.614102 4_1:-63546000 Msa0563230:CDS
GGGGTTGGCTTAGTGAAGCA+TGG 0.616417 4_1:+63538170 None:intergenic
GACCCAAATACTCTTCGTCA+GGG 0.617656 4_1:+63538767 None:intergenic
TCTTCAAAAGTTTCATCTCG+CGG 0.618364 4_1:+63541473 None:intergenic
CAGCTGCTTACAAGAGCATG+TGG 0.619462 4_1:-63539751 Msa0563230:CDS
AGAACACCGACGGCGATCGG+AGG 0.619515 4_1:+63546017 None:intergenic
ATGTTGAGCTCCAAGAGTGG+TGG 0.620332 4_1:-63539116 Msa0563230:CDS
GTTGCTCCGGGTCCTGACAA+AGG 0.621179 4_1:+63538574 None:intergenic
CTTCCAAATCCAGTGTGCTG+TGG 0.622388 4_1:+63540166 None:intergenic
GTGAGGATTTGCTAAGCACA+AGG 0.622715 4_1:-63541835 Msa0563230:CDS
ACTAAAATAGTGTATCAGAT+CGG 0.623685 4_1:+63538458 None:intergenic
GCTGGGGATCCAAAGTCACT+TGG 0.625360 4_1:+63542267 None:intergenic
TTATCGGAAATCATCCTCCA+CGG 0.626060 4_1:-63542204 Msa0563230:CDS
CTACTGGAGCAAGAACTTGG+TGG 0.628297 4_1:-63540524 Msa0563230:CDS
ATCATATAGATATACTGTTG+GGG 0.629144 4_1:+63538539 None:intergenic
TTACACCACAGGGCATTGAA+GGG 0.629797 4_1:+63539259 None:intergenic
GTGGACAGCAAAGTGAGCAA+TGG 0.630531 4_1:-63545884 Msa0563230:CDS
ATCTCCGAGAAACACTTGAA+AGG 0.632975 4_1:+63541356 None:intergenic
GAGGATTTGCTAAGCACAAG+GGG 0.635557 4_1:-63541833 Msa0563230:CDS
CAAGTTCAAGCAGTGATCAG+TGG 0.636193 4_1:-63545938 Msa0563230:CDS
TCGTTACAAAGTAGCTCGAG+TGG 0.638320 4_1:-63545860 Msa0563230:CDS
TCAATTCTAGTCTCACATCG+TGG 0.638934 4_1:+63541518 None:intergenic
GGAAGCAAAAGTTCATAAGG+AGG 0.642933 4_1:+63538595 None:intergenic
GTCCTCCAGTGAAGCCGTGG+AGG 0.643200 4_1:+63542190 None:intergenic
AGGTCTTCAGTTCTGGAGAG+CGG 0.643829 4_1:-63541244 Msa0563230:CDS
CATCTCGCGGCACATAAACA+GGG 0.644374 4_1:+63541486 None:intergenic
CGGATGTTGAGCTCCAAGAG+TGG 0.647233 4_1:-63539119 Msa0563230:CDS
TTCCGGCAGATCTTATTCGG+AGG 0.647929 4_1:-63539709 Msa0563230:intron
AATGTCTGAATTCGCCATAG+TGG 0.648310 4_1:+63541379 None:intergenic
CTCTTATCGGAGAACACCGA+CGG 0.651240 4_1:+63546007 None:intergenic
TGGAGTGAAATCAAGTGTAA+GGG 0.653346 4_1:-63539096 Msa0563230:CDS
ACCCAAATACTCTTCGTCAG+GGG 0.656711 4_1:+63538768 None:intergenic
GTATCTAGTTTAGGCCACCA+AGG 0.657149 4_1:+63539051 None:intergenic
TCCAGAATCAGCAATAACAA+AGG 0.658477 4_1:-63540549 Msa0563230:CDS
GGTAATGAGAATAGCAGCTG+GGG 0.660706 4_1:+63542251 None:intergenic
TTACAAAGTAGCTCGAGTGG+TGG 0.661157 4_1:-63545857 Msa0563230:CDS
AGATGAACTCTTTGCCCGAG+AGG 0.664250 4_1:-63540322 Msa0563230:CDS
GTTCAAGCAGTGATCAGTGG+CGG 0.666328 4_1:-63545935 Msa0563230:CDS
TATCAAAGATCTTCGACGTG+AGG 0.666460 4_1:-63541852 Msa0563230:CDS
TGAACTCTACCGGAGCGAGT+AGG 0.669590 4_1:+63541650 None:intergenic
TGAGGATTTGCTAAGCACAA+GGG 0.669756 4_1:-63541834 Msa0563230:CDS
TAGTTGGATCTAGTTTGCTG+CGG 0.682588 4_1:+63540582 None:intergenic
TGAATGGCAAAAGCATGTCA+TGG 0.684212 4_1:+63540351 None:intergenic
TCTCCGATAAGAGGCACCGG+AGG 0.691008 4_1:-63545997 Msa0563230:CDS
GCCTAAACTAGATACCAAAG+AGG 0.696249 4_1:-63539043 Msa0563230:CDS
CGAAGATCTTTGATACCAGG+TGG 0.696678 4_1:+63541860 None:intergenic
AGAGGAATTGCATCTCCAAG+GGG 0.714942 4_1:+63538151 None:intergenic
AATGAAGAGAATCGTCCGGG+AGG 0.719002 4_1:+63540289 None:intergenic
AAAAGCGTGGAATCTTACGT+AGG 0.726945 4_1:-63542354 Msa0563230:CDS
CTTCCGGTTCTACAGCGACG+AGG 0.730830 4_1:+63541677 None:intergenic
AATGATAGAGGTGAAAGCAG+TGG 0.733351 4_1:-63545819 Msa0563230:CDS
TTTCACGGTCATCTGAACGG+CGG 0.756617 4_1:-63545967 Msa0563230:CDS
GAAGACCCTTCAATGCCCTG+TGG 0.756949 4_1:-63539264 Msa0563230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATTGATTTTAAAAAG+AGG + chr4_1:63538556-63538575 None:intergenic 10.0%
!!! TTACATAGAATTATTTTAAA+AGG - chr4_1:63538836-63538855 Msa0563230:CDS 10.0%
!!! TACATAGAATTATTTTAAAA+GGG - chr4_1:63538837-63538856 Msa0563230:CDS 10.0%
!!! AAAGTTTAAAGTTTAAATTT+AGG + chr4_1:63539810-63539829 None:intergenic 10.0%
!! TAGAATAAAAAATAAAAGAA+GGG + chr4_1:63540234-63540253 None:intergenic 10.0%
!! TTAGAATAAAAAATAAAAGA+AGG + chr4_1:63540235-63540254 None:intergenic 10.0%
!! ATATATTAATAGTTTGAATT+TGG + chr4_1:63541021-63541040 None:intergenic 10.0%
!!! CATATAAGATTTTTTTTTTA+TGG + chr4_1:63541183-63541202 None:intergenic 10.0%
!!! TCATTTATACAATTTTTTTA+TGG - chr4_1:63546058-63546077 Msa0563230:exon 10.0%
!! AACTAAAAAGTAATTAATGA+TGG - chr4_1:63539043-63539062 Msa0563230:CDS 15.0%
!! ACTCCATTTATTATATAAAA+TGG - chr4_1:63539130-63539149 Msa0563230:CDS 15.0%
!!! TCTCCATTTTATATAATAAA+TGG + chr4_1:63539136-63539155 None:intergenic 15.0%
!! ATTTATTATATAAAATGGAG+AGG - chr4_1:63539135-63539154 Msa0563230:CDS 15.0%
!! ATATTCTAACTAAATCAATT+TGG - chr4_1:63539711-63539730 Msa0563230:CDS 15.0%
!!! CACAAATTAATTTTTTTCTT+GGG + chr4_1:63539741-63539760 None:intergenic 15.0%
!!! ACACAAATTAATTTTTTTCT+TGG + chr4_1:63539742-63539761 None:intergenic 15.0%
!!! CATTTAAATTTTACGAAATA+AGG + chr4_1:63540318-63540337 None:intergenic 15.0%
!! CTTATTTCGTAAAATTTAAA+TGG - chr4_1:63540316-63540335 Msa0563230:CDS 15.0%
!!! ACTGTATTTATCTTTATTTT+AGG + chr4_1:63540470-63540489 None:intergenic 15.0%
!!! TAATTTCACACATTTTTATA+TGG - chr4_1:63540492-63540511 Msa0563230:intron 15.0%
!!! GAAATTGAAAAGATTTTAAA+TGG + chr4_1:63540791-63540810 None:intergenic 15.0%
!!! ATCAAATTGTTTTTTATTAG+AGG + chr4_1:63540948-63540967 None:intergenic 15.0%
!!! ATTGTGGATAATTTTTTTTA+GGG + chr4_1:63541262-63541281 None:intergenic 15.0%
!!! AATTGTGGATAATTTTTTTT+AGG + chr4_1:63541263-63541282 None:intergenic 15.0%
!! TCTTCAAAAAAAAGAAATTA+GGG + chr4_1:63541323-63541342 None:intergenic 15.0%
!! TATTATTATCATCATGTTAT+AGG + chr4_1:63541625-63541644 None:intergenic 15.0%
!! CAGTAATAAATAATATATGA+TGG + chr4_1:63544591-63544610 None:intergenic 15.0%
!! ATAAAAAATGTAACACAATT+AGG - chr4_1:63544618-63544637 Msa0563230:intron 15.0%
!! TAAAAAATGTAACACAATTA+GGG - chr4_1:63544619-63544638 Msa0563230:intron 15.0%
!! AATTATAAATGCAAGAAATA+AGG - chr4_1:63545446-63545465 Msa0563230:intron 15.0%
!!! CAGAAAAAATATTTAAGTTT+TGG + chr4_1:63545980-63545999 None:intergenic 15.0%
!! AGATGTGAAAAATAAAAAAT+GGG + chr4_1:63546037-63546056 None:intergenic 15.0%
!! AAGATGTGAAAAATAAAAAA+TGG + chr4_1:63546038-63546057 None:intergenic 15.0%
!! TGATGAATTAAAAGAAGAAA+AGG + chr4_1:63538496-63538515 None:intergenic 20.0%
!!! CTTCTTTTAATTCATCAAAA+AGG - chr4_1:63538499-63538518 Msa0563230:three_prime_UTR 20.0%
!! TAATTAAGTTAGAGAATACT+CGG - chr4_1:63538657-63538676 Msa0563230:CDS 20.0%
!!! TTTAGAATTTCACAATCAAT+TGG - chr4_1:63538886-63538905 Msa0563230:CDS 20.0%
!! AAAAAGTAATTAATGATGGT+AGG - chr4_1:63539047-63539066 Msa0563230:CDS 20.0%
!! AATGTTAATCATTTCTTTAG+AGG - chr4_1:63539334-63539353 Msa0563230:intron 20.0%
!! TGAAATGGTATAATGTTAAT+TGG + chr4_1:63539523-63539542 None:intergenic 20.0%
!!! TTATGTTGATTGAATTTACA+TGG + chr4_1:63539785-63539804 None:intergenic 20.0%
!! ATATGTTAATGAACTATATG+TGG - chr4_1:63541198-63541217 Msa0563230:intron 20.0%
!! CTCTTCAAAAAAAAGAAATT+AGG + chr4_1:63541324-63541343 None:intergenic 20.0%
!!! CTAATTTCTTTTTTTTGAAG+AGG - chr4_1:63541322-63541341 Msa0563230:CDS 20.0%
!! GTAACTTATCGTTTAAATTA+GGG + chr4_1:63541362-63541381 None:intergenic 20.0%
!! TGTAACTTATCGTTTAAATT+AGG + chr4_1:63541363-63541382 None:intergenic 20.0%
!! TACTTATATTCGAGAATAAA+AGG + chr4_1:63541392-63541411 None:intergenic 20.0%
!! AAAAATGTATCAATGTATAG+TGG - chr4_1:63541415-63541434 Msa0563230:CDS 20.0%
!!! GTTTTTTCTTACTTTTTTTG+TGG - chr4_1:63542473-63542492 Msa0563230:intron 20.0%
!! CAAAACCTAAAAATTCAAAA+TGG + chr4_1:63542501-63542520 None:intergenic 20.0%
!!! CATTTTGAATTTTTAGGTTT+TGG - chr4_1:63542499-63542518 Msa0563230:intron 20.0%
!!! TTATATTGATGGTGTTAATT+TGG - chr4_1:63542775-63542794 Msa0563230:intron 20.0%
!!! TATATTGATGGTGTTAATTT+GGG - chr4_1:63542776-63542795 Msa0563230:intron 20.0%
!! TCAACTTGAAACTAAAATTT+GGG + chr4_1:63543067-63543086 None:intergenic 20.0%
!! TTCAACTTGAAACTAAAATT+TGG + chr4_1:63543068-63543087 None:intergenic 20.0%
!! ACAAAGTTATATTGTATTCA+AGG + chr4_1:63543270-63543289 None:intergenic 20.0%
!!! CTTTTTTATTCATACCAATT+AGG - chr4_1:63543436-63543455 Msa0563230:intron 20.0%
!!! GTGTAAACTTTTTTATTTTG+CGG + chr4_1:63543899-63543918 None:intergenic 20.0%
!! AATAAAAAAGTTTACACACA+AGG - chr4_1:63543902-63543921 Msa0563230:intron 20.0%
!! AAAAAATGTAACACAATTAG+GGG - chr4_1:63544620-63544639 Msa0563230:intron 20.0%
!! ATGCAATTGAAAATTTGAAA+CGG - chr4_1:63544665-63544684 Msa0563230:intron 20.0%
!!! TATTAACAGATTGCTATTAA+AGG + chr4_1:63544780-63544799 None:intergenic 20.0%
!! AGAATTTACTAAACAATTTC+AGG + chr4_1:63545401-63545420 None:intergenic 20.0%
!! ATAAACGAATTGATCAATAT+CGG + chr4_1:63545765-63545784 None:intergenic 20.0%
!!! TTTAAGTTTTGGTAAATAAG+AGG + chr4_1:63545969-63545988 None:intergenic 20.0%
! AAAGAAAATGAAAGTTAGTG+TGG - chr4_1:63538313-63538332 Msa0563230:three_prime_UTR 25.0%
! TATTAAGAAGAAACAAACCA+GGG + chr4_1:63538424-63538443 None:intergenic 25.0%
! ATATTAAGAAGAAACAAACC+AGG + chr4_1:63538425-63538444 None:intergenic 25.0%
!! AAAAAAAAGTGTGATTGTGT+GGG + chr4_1:63538530-63538549 None:intergenic 25.0%
!! TAAAAAAAAGTGTGATTGTG+TGG + chr4_1:63538531-63538550 None:intergenic 25.0%
! TACATTGACAAAGAAAATTG+AGG - chr4_1:63538712-63538731 Msa0563230:CDS 25.0%
! AGACACATAAAATAGATAGT+GGG + chr4_1:63539091-63539110 None:intergenic 25.0%
! TAGACACATAAAATAGATAG+TGG + chr4_1:63539092-63539111 None:intergenic 25.0%
! AATAAATGGAGTATGCAATT+TGG + chr4_1:63539122-63539141 None:intergenic 25.0%
! TAACATTATACCATTTCACT+TGG - chr4_1:63539525-63539544 Msa0563230:intron 25.0%
!!! AATTAGTATTTTGGACTCTT+AGG + chr4_1:63539665-63539684 None:intergenic 25.0%
!! GTTTAACCTTTTATCGAATT+TGG - chr4_1:63539926-63539945 Msa0563230:CDS 25.0%
! TGCATCAAAAATTGAAGTAT+TGG + chr4_1:63540050-63540069 None:intergenic 25.0%
!!! TTAAACTTTTTTGGGTGTAA+TGG - chr4_1:63540183-63540202 Msa0563230:CDS 25.0%
!! TACGAAATAAGGAACTATTT+TGG + chr4_1:63540307-63540326 None:intergenic 25.0%
!! TTTAAATGGAAAGTACGTAT+TGG - chr4_1:63540356-63540375 Msa0563230:CDS 25.0%
! AAATAAGTAAAATCCACAGT+CGG + chr4_1:63540685-63540704 None:intergenic 25.0%
!! ACTGTGGATTTTACTTATTT+TGG - chr4_1:63540685-63540704 Msa0563230:intron 25.0%
!! TGAAAAGATTTTAAATGGAG+AGG + chr4_1:63540786-63540805 None:intergenic 25.0%
! ATCAAAATCTTGAAGATCAA+CGG + chr4_1:63540898-63540917 None:intergenic 25.0%
!! CATGTAGTTAATTTTTATGC+TGG + chr4_1:63541112-63541131 None:intergenic 25.0%
!!! TTTTTTTAGGGAATGAATTG+TGG + chr4_1:63541250-63541269 None:intergenic 25.0%
! AATCTAGTCTCGTTAAAAAA+AGG + chr4_1:63541672-63541691 None:intergenic 25.0%
!! ACATTTTCAGCTACTAATAA+TGG - chr4_1:63541721-63541740 Msa0563230:CDS 25.0%
! TGAATATGATTCTACTTTGA+GGG + chr4_1:63541981-63542000 None:intergenic 25.0%
! TTGAATATGATTCTACTTTG+AGG + chr4_1:63541982-63542001 None:intergenic 25.0%
!!! AACTTTTGAAGAAATCAAAC+AGG - chr4_1:63542637-63542656 Msa0563230:intron 25.0%
!! ATTGACAAGCTTTATATTGA+TGG - chr4_1:63542764-63542783 Msa0563230:intron 25.0%
! ATAATAGAAAATCTCTTGGT+GGG - chr4_1:63542818-63542837 Msa0563230:intron 25.0%
! CAACTTGAAACTAAAATTTG+GGG + chr4_1:63543066-63543085 None:intergenic 25.0%
!!! TAGACATGAAGAATTGATTT+TGG + chr4_1:63543139-63543158 None:intergenic 25.0%
!! CAATTCTTCATGTCTAAAAT+CGG - chr4_1:63543143-63543162 Msa0563230:intron 25.0%
! TGAAACCAAACATGTTAAAA+AGG - chr4_1:63543184-63543203 Msa0563230:intron 25.0%
! TAAAAAAAATGTGACTCATG+AGG + chr4_1:63543229-63543248 None:intergenic 25.0%
!!! CACATTTTTTTTACTGTACT+AGG - chr4_1:63543236-63543255 Msa0563230:intron 25.0%
! TTCAATAGCTCAATATTTAC+TGG + chr4_1:63543407-63543426 None:intergenic 25.0%
! AGTAAATATTGAGCTATTGA+AGG - chr4_1:63543406-63543425 Msa0563230:intron 25.0%
! ACAAACAAACAAACAAAACA+TGG + chr4_1:63543624-63543643 None:intergenic 25.0%
! AATGACTTGATGAAAAGAAA+TGG - chr4_1:63544063-63544082 Msa0563230:intron 25.0%
! AATATGTAATATGCAGGTTA+AGG - chr4_1:63544129-63544148 Msa0563230:intron 25.0%
! CTATGAGTAGCAATTATATA+CGG + chr4_1:63544173-63544192 None:intergenic 25.0%
! ATTACTACTATAGTCATGAA+TGG + chr4_1:63544509-63544528 None:intergenic 25.0%
! AAGAAAGGTTGAACTTAAAA+TGG + chr4_1:63544738-63544757 None:intergenic 25.0%
! TATATATGTCCTATGAAGAA+AGG + chr4_1:63544753-63544772 None:intergenic 25.0%
!! AATCAGAATCATTTTCTTGA+GGG + chr4_1:63545206-63545225 None:intergenic 25.0%
!! TAATCAGAATCATTTTCTTG+AGG + chr4_1:63545207-63545226 None:intergenic 25.0%
! ATCATATAGATATACTGTTG+GGG + chr4_1:63545563-63545582 None:intergenic 25.0%
! GATCATATAGATATACTGTT+GGG + chr4_1:63545564-63545583 None:intergenic 25.0%
! CAAGTTATATTATAATGCCA+AGG + chr4_1:63545602-63545621 None:intergenic 25.0%
! ACTAAAATAGTGTATCAGAT+CGG + chr4_1:63545644-63545663 None:intergenic 25.0%
!! TATATTTTGCACAAGATCTA+TGG - chr4_1:63545803-63545822 Msa0563230:CDS 25.0%
!! AGAAAAATAATAGCCTTACA+AGG - chr4_1:63545845-63545864 Msa0563230:CDS 25.0%
!! GAAAAATAATAGCCTTACAA+GGG - chr4_1:63545846-63545865 Msa0563230:CDS 25.0%
! TATCTAACAAATGAGATATG+TGG + chr4_1:63546099-63546118 None:intergenic 25.0%
AAAGAAGAAAAGGAGAGATA+TGG + chr4_1:63538486-63538505 None:intergenic 30.0%
ATATTCCGCTGAACTATTTA+GGG + chr4_1:63539182-63539201 None:intergenic 30.0%
! ACTTCTTTTACCAAGTGAAA+TGG + chr4_1:63539538-63539557 None:intergenic 30.0%
! TCTAAAGTCATTCATTTGAG+AGG - chr4_1:63539569-63539588 Msa0563230:intron 30.0%
! ACTCAACGCAATTAGTATTT+TGG + chr4_1:63539674-63539693 None:intergenic 30.0%
!! TCCATTATTTTCGTTTTTGC+AGG + chr4_1:63539853-63539872 None:intergenic 30.0%
AGATGACCAAATTCGATAAA+AGG + chr4_1:63539935-63539954 None:intergenic 30.0%
!! TGTCGTAAGAGCTTTATTTA+AGG - chr4_1:63539991-63540010 Msa0563230:intron 30.0%
ATTTATCCTGTAAGAAAGAG+AGG - chr4_1:63540142-63540161 Msa0563230:CDS 30.0%
TCTCAGTAGCACAATTTAAA+TGG - chr4_1:63540342-63540361 Msa0563230:CDS 30.0%
!! TCAATTTCTTTCGTTTTGAG+AGG - chr4_1:63540803-63540822 Msa0563230:intron 30.0%
! ATTGATCCACAACTTTTCAA+GGG + chr4_1:63541086-63541105 None:intergenic 30.0%
! AATTGATCCACAACTTTTCA+AGG + chr4_1:63541087-63541106 None:intergenic 30.0%
ACTACATGTGTAAATTTGCA+AGG - chr4_1:63541124-63541143 Msa0563230:intron 30.0%
CTACATGTGTAAATTTGCAA+GGG - chr4_1:63541125-63541144 Msa0563230:intron 30.0%
!!! AAGAAATTAGGGTTTTGAGA+TGG + chr4_1:63541312-63541331 None:intergenic 30.0%
ACCAACAAATTAATCCAAGT+GGG - chr4_1:63541482-63541501 Msa0563230:CDS 30.0%
! TACTAATAATGGAAAAAGCG+TGG - chr4_1:63541732-63541751 Msa0563230:CDS 30.0%
ACAACATATGGAATGTTTGA+TGG + chr4_1:63541787-63541806 None:intergenic 30.0%
ATCAAACATTCCATATGTTG+TGG - chr4_1:63541786-63541805 Msa0563230:CDS 30.0%
TTCAAAGGAGTTCCATTTAT+CGG - chr4_1:63541879-63541898 Msa0563230:CDS 30.0%
! TTTTCACAGTACTACTTACT+TGG + chr4_1:63542008-63542027 None:intergenic 30.0%
CATAACATACACTTCTTCAA+AGG + chr4_1:63542151-63542170 None:intergenic 30.0%
AACAACATGCTAAGTTAAGT+TGG + chr4_1:63542178-63542197 None:intergenic 30.0%
! TTTTGTTGCATGGATTTGAT+AGG - chr4_1:63542196-63542215 Msa0563230:CDS 30.0%
! TGATTTTCTTTCCTGTTCTT+GGG + chr4_1:63542303-63542322 None:intergenic 30.0%
TAACAAGTTCCTCTTTATCA+GGG + chr4_1:63542370-63542389 None:intergenic 30.0%
AGAAAAAACATGAACTCTAC+CGG + chr4_1:63542462-63542481 None:intergenic 30.0%
!!! TGGTGCCATTTTGAATTTTT+AGG - chr4_1:63542493-63542512 Msa0563230:intron 30.0%
!!! AGTGCTCTAAATGTGTTTTT+TGG - chr4_1:63542543-63542562 Msa0563230:intron 30.0%
AGGGATAATAGAAAATCTCT+TGG - chr4_1:63542814-63542833 Msa0563230:intron 30.0%
GATAATAGAAAATCTCTTGG+TGG - chr4_1:63542817-63542836 Msa0563230:intron 30.0%
!! AACATGTTTGGTTTCACTTT+TGG + chr4_1:63543180-63543199 None:intergenic 30.0%
! AAACATGTTAAAAAGGCATG+CGG - chr4_1:63543191-63543210 Msa0563230:intron 30.0%
!! ACTAGTTTGTTGAATGAACA+TGG + chr4_1:63543304-63543323 None:intergenic 30.0%
AAACTAGATCCAACTATCTA+TGG - chr4_1:63543524-63543543 Msa0563230:intron 30.0%
!!! CAATTACTTTTTACACTGAC+AGG - chr4_1:63543691-63543710 Msa0563230:intron 30.0%
TCCATCAACTAGTAAATCAT+TGG - chr4_1:63543993-63544012 Msa0563230:intron 30.0%
ACCAATGATTTACTAGTTGA+TGG + chr4_1:63543997-63544016 None:intergenic 30.0%
TAAATCATTGGTAAGACGAT+TGG - chr4_1:63544005-63544024 Msa0563230:intron 30.0%
GGCAAAGTTTAATAAATGGA+GGG - chr4_1:63544273-63544292 Msa0563230:intron 30.0%
GCAAAGTTTAATAAATGGAG+GGG - chr4_1:63544274-63544293 Msa0563230:intron 30.0%
CAAAGTTTAATAAATGGAGG+GGG - chr4_1:63544275-63544294 Msa0563230:intron 30.0%
AACATTGCTTGATATCTCTT+TGG - chr4_1:63544435-63544454 Msa0563230:intron 30.0%
! TTTGAAACGGTTCCTATAAA+AGG - chr4_1:63544678-63544697 Msa0563230:intron 30.0%
CAAGGAAAAATATCAAGATG+TGG - chr4_1:63544704-63544723 Msa0563230:intron 30.0%
TAAGTTCAACCTTTCTTCAT+AGG - chr4_1:63544741-63544760 Msa0563230:intron 30.0%
AGCAATCTGTTAATACTCTA+TGG - chr4_1:63544785-63544804 Msa0563230:intron 30.0%
AGATTCTACCCATTCTTTAA+TGG + chr4_1:63544920-63544939 None:intergenic 30.0%
CGATGCAATTGAATTTGATT+CGG + chr4_1:63544962-63544981 None:intergenic 30.0%
CGAATCAAATTCAATTGCAT+CGG - chr4_1:63544960-63544979 Msa0563230:intron 30.0%
TTGTCGTAAGTATGAAAGAT+AGG + chr4_1:63545083-63545102 None:intergenic 30.0%
TCATACTTACGACAATCATA+TGG - chr4_1:63545088-63545107 Msa0563230:intron 30.0%
CATACTTACGACAATCATAT+GGG - chr4_1:63545089-63545108 Msa0563230:intron 30.0%
CAACATGCTGCTATAAATTT+CGG - chr4_1:63545123-63545142 Msa0563230:intron 30.0%
GATGATAGGAAAAAAAGTTG+AGG + chr4_1:63545249-63545268 None:intergenic 30.0%
TGACTCATTTGCATAATCAT+TGG - chr4_1:63545358-63545377 Msa0563230:intron 30.0%
TAATCATTGGATCAATGATC+AGG - chr4_1:63545371-63545390 Msa0563230:intron 30.0%
TAAATTCTCTACTAGACTTG+AGG - chr4_1:63545413-63545432 Msa0563230:intron 30.0%
AAAGGAAGCAAAAGTTCATA+AGG + chr4_1:63545510-63545529 None:intergenic 30.0%
CGATCATATAGATATACTGT+TGG + chr4_1:63545565-63545584 None:intergenic 30.0%
!! GATCTGATACACTATTTTAG+TGG - chr4_1:63545643-63545662 Msa0563230:intron 30.0%
ATTGATCAATTCGTTTATGC+TGG - chr4_1:63545767-63545786 Msa0563230:CDS 30.0%
CTTGTGCAAAATATACATGA+AGG + chr4_1:63545798-63545817 None:intergenic 30.0%
! TTTTCTCTATATCCCTTGTA+AGG + chr4_1:63545861-63545880 None:intergenic 30.0%
AATGAAAGTTAGTGTGGTTG+AGG - chr4_1:63538319-63538338 Msa0563230:three_prime_UTR 35.0%
! CAGTTGGAGTATTTCATCAA+TGG - chr4_1:63538353-63538372 Msa0563230:three_prime_UTR 35.0%
GAGTATTTCATCAATGGTGT+TGG - chr4_1:63538359-63538378 Msa0563230:three_prime_UTR 35.0%
CTTGTGTGATTCAAATGAAG+AGG - chr4_1:63538605-63538624 Msa0563230:CDS 35.0%
TACTCTCAACCAAAACAACT+AGG + chr4_1:63538920-63538939 None:intergenic 35.0%
ATCTCTCCAAATGGATGAAA+TGG + chr4_1:63539000-63539019 None:intergenic 35.0%
TGTGTCTATATCTCTCCAAA+TGG + chr4_1:63539009-63539028 None:intergenic 35.0%
TATTCCGCTGAACTATTTAG+GGG + chr4_1:63539181-63539200 None:intergenic 35.0%
CATATTCCGCTGAACTATTT+AGG + chr4_1:63539183-63539202 None:intergenic 35.0%
! GCCACTCATTTAATTTCACT+AGG - chr4_1:63539204-63539223 Msa0563230:CDS 35.0%
GCCTAGTGAAATTAAATGAG+TGG + chr4_1:63539208-63539227 None:intergenic 35.0%
GCCTGCAAAAACGAAAATAA+TGG - chr4_1:63539849-63539868 Msa0563230:CDS 35.0%
TTTCTTTAATAAGCCGACTG+TGG - chr4_1:63540669-63540688 Msa0563230:intron 35.0%
ATCCTTACTCGTTTCTTAAG+AGG - chr4_1:63540826-63540845 Msa0563230:intron 35.0%
!! TTGATCCACAACTTTTCAAG+GGG + chr4_1:63541085-63541104 None:intergenic 35.0%
!! GTTGCTCTTTTTGAGAATTG+TGG + chr4_1:63541278-63541297 None:intergenic 35.0%
ATTCTCAAAAAGAGCAACAC+AGG - chr4_1:63541280-63541299 Msa0563230:CDS 35.0%
! ATAGTGGTCTTACTTCTTAG+TGG - chr4_1:63541431-63541450 Msa0563230:CDS 35.0%
! TAGTGGTCTTACTTCTTAGT+GGG - chr4_1:63541432-63541451 Msa0563230:CDS 35.0%
CACCAACAAATTAATCCAAG+TGG - chr4_1:63541481-63541500 Msa0563230:CDS 35.0%
!! ACCCACTTGGATTAATTTGT+TGG + chr4_1:63541486-63541505 None:intergenic 35.0%
AATTAATCCAAGTGGGTAAC+TGG - chr4_1:63541489-63541508 Msa0563230:CDS 35.0%
GTAGATTCTACTCTCTCAAT+GGG + chr4_1:63541550-63541569 None:intergenic 35.0%
AGTAGATTCTACTCTCTCAA+TGG + chr4_1:63541551-63541570 None:intergenic 35.0%
TTATAGGTAGTTAGTAGCAG+CGG + chr4_1:63541609-63541628 None:intergenic 35.0%
! TATGGAATGTTTGATGGCTT+CGG + chr4_1:63541781-63541800 None:intergenic 35.0%
CATTACCAATCTTCGTTCAA+AGG - chr4_1:63541864-63541883 Msa0563230:CDS 35.0%
GTGTTAGCTGGAAAGAAAAT+GGG + chr4_1:63541934-63541953 None:intergenic 35.0%
TGTGTTAGCTGGAAAGAAAA+TGG + chr4_1:63541935-63541954 None:intergenic 35.0%
! TTTTCTTTCCAGCTAACACA+TGG - chr4_1:63541935-63541954 Msa0563230:intron 35.0%
! CTTGTTTGTTAGTATACACG+TGG + chr4_1:63542110-63542129 None:intergenic 35.0%
!!! TAGCATGTTGTTTTGTTGCA+TGG - chr4_1:63542186-63542205 Msa0563230:CDS 35.0%
! GTGATTTTCTTTCCTGTTCT+TGG + chr4_1:63542304-63542323 None:intergenic 35.0%
CTAACAAGTTCCTCTTTATC+AGG + chr4_1:63542371-63542390 None:intergenic 35.0%
TCTTCAAAAGTTTCATCTCG+CGG + chr4_1:63542629-63542648 None:intergenic 35.0%
! CATTCCTTTCAAGTGTTTCT+CGG - chr4_1:63542739-63542758 Msa0563230:intron 35.0%
TTGGGAGATGAAGAGAATAA+AGG - chr4_1:63542794-63542813 Msa0563230:intron 35.0%
TGGGAGATGAAGAGAATAAA+GGG - chr4_1:63542795-63542814 Msa0563230:intron 35.0%
! GCATACCTTTTACAATAGCT+GGG + chr4_1:63542898-63542917 None:intergenic 35.0%
! AGCATACCTTTTACAATAGC+TGG + chr4_1:63542899-63542918 None:intergenic 35.0%
! GCATGCCTTTTTAACATGTT+TGG + chr4_1:63543192-63543211 None:intergenic 35.0%
! TAGTCCTTTTGCATTGTTAC+AGG - chr4_1:63543320-63543339 Msa0563230:intron 35.0%
ATCTCCTGTAACAATGCAAA+AGG + chr4_1:63543327-63543346 None:intergenic 35.0%
! TTACAGGAGATAGATTTGCT+TGG - chr4_1:63543336-63543355 Msa0563230:intron 35.0%
TACTCATGTAACTGCCTAAT+TGG + chr4_1:63543453-63543472 None:intergenic 35.0%
CATGAGTATCCAACTATTGA+AGG - chr4_1:63543465-63543484 Msa0563230:intron 35.0%
CCAAAAACACCTTCAATAGT+TGG + chr4_1:63543477-63543496 None:intergenic 35.0%
!!! CCAACTATTGAAGGTGTTTT+TGG - chr4_1:63543474-63543493 Msa0563230:intron 35.0%
!! TTGTTATTGCTGATTCTGGA+GGG + chr4_1:63543550-63543569 None:intergenic 35.0%
!! TTTGTTATTGCTGATTCTGG+AGG + chr4_1:63543551-63543570 None:intergenic 35.0%
TCCAGAATCAGCAATAACAA+AGG - chr4_1:63543550-63543569 Msa0563230:intron 35.0%
!! TCCTTTGTTATTGCTGATTC+TGG + chr4_1:63543554-63543573 None:intergenic 35.0%
AGCAATAACAAAGGAACTAC+TGG - chr4_1:63543559-63543578 Msa0563230:intron 35.0%
GAGTTCATCTTCTTGATGAA+TGG + chr4_1:63543767-63543786 None:intergenic 35.0%
TTGTAATGAAGAGAATCGTC+CGG + chr4_1:63543817-63543836 None:intergenic 35.0%
GACGATTCTCTTCATTACAA+AGG - chr4_1:63543817-63543836 Msa0563230:intron 35.0%
ATTCTCTTCATTACAAAGGC+CGG - chr4_1:63543821-63543840 Msa0563230:intron 35.0%
AGAGAAAGCTCAATAGCTAT+AGG + chr4_1:63543857-63543876 None:intergenic 35.0%
CTCTGAGTAAATAGATACAG+TGG - chr4_1:63544105-63544124 Msa0563230:intron 35.0%
AGTGGCAATATGTAATATGC+AGG - chr4_1:63544123-63544142 Msa0563230:intron 35.0%
GGATGTAGCAACTTGTAAAT+AGG + chr4_1:63544215-63544234 None:intergenic 35.0%
TGGAAATTAATGCACTTGCT+CGG - chr4_1:63544252-63544271 Msa0563230:intron 35.0%
GCTCGGCAAAGTTTAATAAA+TGG - chr4_1:63544269-63544288 Msa0563230:intron 35.0%
CGGCAAAGTTTAATAAATGG+AGG - chr4_1:63544272-63544291 Msa0563230:intron 35.0%
!! ATTGAAGCATCTTTTAGTCC+TGG - chr4_1:63544302-63544321 Msa0563230:intron 35.0%
TAGTCCTGGAAAATATGCTT+TGG - chr4_1:63544316-63544335 Msa0563230:intron 35.0%
ATTTGATATGGAGTCTCTTC+CGG - chr4_1:63544373-63544392 Msa0563230:intron 35.0%
! TGATACTGTTTTCCAACTTC+AGG - chr4_1:63544544-63544563 Msa0563230:intron 35.0%
! TAACACAATTAGGGGTATGT+TGG - chr4_1:63544628-63544647 Msa0563230:intron 35.0%
! TTTTCCTTGCCACCTTTTAT+AGG + chr4_1:63544693-63544712 None:intergenic 35.0%
! ATCACAAGTTTTACACCACA+GGG + chr4_1:63544853-63544872 None:intergenic 35.0%
! AATCACAAGTTTTACACCAC+AGG + chr4_1:63544854-63544873 None:intergenic 35.0%
TGGAGTGAAATCAAGTGTAA+GGG - chr4_1:63545003-63545022 Msa0563230:intron 35.0%
CTGACAAAAGAAATGAACCT+TGG - chr4_1:63545031-63545050 Msa0563230:intron 35.0%
ACAAAAGAAATGAACCTTGG+TGG - chr4_1:63545034-63545053 Msa0563230:intron 35.0%
! TCCTCTTTGGTATCTAGTTT+AGG + chr4_1:63545060-63545079 None:intergenic 35.0%
TATGAAAGATAGGTCCTCTT+TGG + chr4_1:63545073-63545092 None:intergenic 35.0%
! AATTTCGGACAATACCCTTT+TGG - chr4_1:63545138-63545157 Msa0563230:intron 35.0%
! ATAAGTTTTCTCATGAGGGT+AGG + chr4_1:63545183-63545202 None:intergenic 35.0%
! AGGGATAAGTTTTCTCATGA+GGG + chr4_1:63545187-63545206 None:intergenic 35.0%
ACTTCAAGCTACCAAAGTAA+TGG - chr4_1:63545281-63545300 Msa0563230:intron 35.0%
!! CCAGTTCTACTTTTCAAACT+TGG + chr4_1:63545474-63545493 None:intergenic 35.0%
CCAAGTTTGAAAAGTAGAAC+TGG - chr4_1:63545471-63545490 Msa0563230:intron 35.0%
CATGACTTATATGCGACATA+TGG + chr4_1:63545909-63545928 None:intergenic 35.0%
TCATTTCACGGTCATCTGAA+CGG - chr4_1:63538129-63538148 Msa0563230:three_prime_UTR 40.0%
AAGCAACGGTGAAATGATAG+AGG - chr4_1:63538268-63538287 Msa0563230:three_prime_UTR 40.0%
AATGATAGAGGTGAAAGCAG+TGG - chr4_1:63538280-63538299 Msa0563230:three_prime_UTR 40.0%
!! TTCATCAATGGTGTTGGTCA+AGG - chr4_1:63538365-63538384 Msa0563230:three_prime_UTR 40.0%
!! TCATCAATGGTGTTGGTCAA+GGG - chr4_1:63538366-63538385 Msa0563230:three_prime_UTR 40.0%
GTTAGAGAATACTCGGATCT+AGG - chr4_1:63538664-63538683 Msa0563230:CDS 40.0%
! TCTAGGCGCTTTTAGATCTT+TGG - chr4_1:63538681-63538700 Msa0563230:CDS 40.0%
! GAGCAGTAACCTAGTTGTTT+TGG - chr4_1:63538908-63538927 Msa0563230:CDS 40.0%
!!! TTGTTTTGGTTGAGAGTAGC+TGG - chr4_1:63538922-63538941 Msa0563230:CDS 40.0%
GAGTTAAGATCCTCTCCATT+TGG - chr4_1:63538966-63538985 Msa0563230:CDS 40.0%
!! GAAATGGAGAGAGTACCAAA+TGG + chr4_1:63538984-63539003 None:intergenic 40.0%
CTCTCTCCATTTCATCCATT+TGG - chr4_1:63538991-63539010 Msa0563230:CDS 40.0%
TGAACTATTTAGGGGACTCA+CGG + chr4_1:63539173-63539192 None:intergenic 40.0%
ACTCTTCCTCTCTTTCTTAC+AGG + chr4_1:63540151-63540170 None:intergenic 40.0%
! AATGCCATTTCCGTCAAAGA+AGG - chr4_1:63540553-63540572 Msa0563230:CDS 40.0%
! ATGCCATTTCCGTCAAAGAA+GGG - chr4_1:63540554-63540573 Msa0563230:CDS 40.0%
TTTACTCCAAGCCATCAAGT+GGG - chr4_1:63540588-63540607 Msa0563230:CDS 40.0%
CACATCGTTGAAACCCAATT+TGG + chr4_1:63540617-63540636 None:intergenic 40.0%
TGAGTTAGATGCTAAAGTCG+TGG - chr4_1:63540642-63540661 Msa0563230:intron 40.0%
TGAATTATGTCCAGACTCGT+TGG - chr4_1:63540737-63540756 Msa0563230:CDS 40.0%
TGCCTCTTAAGAAACGAGTA+AGG + chr4_1:63540831-63540850 None:intergenic 40.0%
! CAATTCATGGGCTACTACAT+TGG + chr4_1:63540856-63540875 None:intergenic 40.0%
TAGTAGCCCATGAATTGACA+AGG - chr4_1:63540859-63540878 Msa0563230:intron 40.0%
AGTAGCCCATGAATTGACAA+GGG - chr4_1:63540860-63540879 Msa0563230:intron 40.0%
AACCACCCTTGTCAATTCAT+GGG + chr4_1:63540868-63540887 None:intergenic 40.0%
TAACCACCCTTGTCAATTCA+TGG + chr4_1:63540869-63540888 None:intergenic 40.0%
GGTGTCTGATCAATACAATC+TGG + chr4_1:63540927-63540946 None:intergenic 40.0%
GGTGCAATAACTACGTCATA+TGG + chr4_1:63541000-63541019 None:intergenic 40.0%
! AGTGGTCTTACTTCTTAGTG+GGG - chr4_1:63541433-63541452 Msa0563230:CDS 40.0%
! AAAAGCGTGGAATCTTACGT+AGG - chr4_1:63541745-63541764 Msa0563230:CDS 40.0%
! GCAGAGTATTCCACAACATA+TGG + chr4_1:63541799-63541818 None:intergenic 40.0%
! TGGTAATGAGAATAGCAGCT+GGG + chr4_1:63541852-63541871 None:intergenic 40.0%
!! TTGGTAATGAGAATAGCAGC+TGG + chr4_1:63541853-63541872 None:intergenic 40.0%
GAACTCCTTTGAACGAAGAT+TGG + chr4_1:63541872-63541891 None:intergenic 40.0%
GGAGGATGATTTCCGATAAA+TGG + chr4_1:63541894-63541913 None:intergenic 40.0%
TTATCGGAAATCATCCTCCA+CGG - chr4_1:63541895-63541914 Msa0563230:intron 40.0%
GAATGAATCCATGTGTTAGC+TGG + chr4_1:63541946-63541965 None:intergenic 40.0%
TATCAAAGATCTTCGACGTG+AGG - chr4_1:63542247-63542266 Msa0563230:CDS 40.0%
!! TGAGGATTTGCTAAGCACAA+GGG - chr4_1:63542265-63542284 Msa0563230:CDS 40.0%
TATGCTCCCTACAATGAGTT+AGG - chr4_1:63542341-63542360 Msa0563230:CDS 40.0%
!! GAACTTGTTAGACCAGTCAT+TGG - chr4_1:63542380-63542399 Msa0563230:intron 40.0%
TCAATTCTAGTCTCACATCG+TGG + chr4_1:63542584-63542603 None:intergenic 40.0%
CAAGTTTGGGTATGAGATTG+TGG + chr4_1:63542697-63542716 None:intergenic 40.0%
AATGTCTGAATTCGCCATAG+TGG + chr4_1:63542723-63542742 None:intergenic 40.0%
ATCTCCGAGAAACACTTGAA+AGG + chr4_1:63542746-63542765 None:intergenic 40.0%
ATGAAACAGGTCTTCAGTTC+TGG - chr4_1:63542848-63542867 Msa0563230:intron 40.0%
GACATCCCAGCTATTGTAAA+AGG - chr4_1:63542890-63542909 Msa0563230:intron 40.0%
TGTGTTTGACTAAGCAGTAG+AGG + chr4_1:63542923-63542942 None:intergenic 40.0%
! GAGATAGATTTGCTTGGTTG+CGG - chr4_1:63543342-63543361 Msa0563230:intron 40.0%
! AGATAGATTTGCTTGGTTGC+GGG - chr4_1:63543343-63543362 Msa0563230:intron 40.0%
!!! AAGGTGTTTTTGGTCTTTGC+AGG - chr4_1:63543484-63543503 Msa0563230:intron 40.0%
!! TAGTTGGATCTAGTTTGCTG+CGG + chr4_1:63543520-63543539 None:intergenic 40.0%
! AGAACTTGGTGGAATAAGCT+TGG - chr4_1:63543586-63543605 Msa0563230:intron 40.0%
TGGTGGAATAAGCTTGGAAA+AGG - chr4_1:63543592-63543611 Msa0563230:intron 40.0%
! CTTTTTACACTGACAGGCTA+TGG - chr4_1:63543697-63543716 Msa0563230:intron 40.0%
! TGAATGGCAAAAGCATGTCA+TGG + chr4_1:63543751-63543770 None:intergenic 40.0%
TGTAATGAAGAGAATCGTCC+GGG + chr4_1:63543816-63543835 None:intergenic 40.0%
CATGTTAGCTCAAATGATGC+TGG - chr4_1:63543968-63543987 Msa0563230:intron 40.0%
! AGCTCCAAAGCATATTTTCC+AGG + chr4_1:63544323-63544342 None:intergenic 40.0%
GAGCATGTGGAGATTTGATA+TGG - chr4_1:63544361-63544380 Msa0563230:intron 40.0%
CTAAATCTCTCTCCTGAAGT+TGG + chr4_1:63544559-63544578 None:intergenic 40.0%
GAAACGGTTCCTATAAAAGG+TGG - chr4_1:63544681-63544700 Msa0563230:intron 40.0%
TCTATGGAATGTGCTTTCCA+GGG - chr4_1:63544801-63544820 Msa0563230:intron 40.0%
TCTGGTCTGCCATTAAAGAA+TGG - chr4_1:63544908-63544927 Msa0563230:intron 40.0%
CTGGTCTGCCATTAAAGAAT+GGG - chr4_1:63544909-63544928 Msa0563230:intron 40.0%
GTGGAGTGAAATCAAGTGTA+AGG - chr4_1:63545002-63545021 Msa0563230:intron 40.0%
GCCTAAACTAGATACCAAAG+AGG - chr4_1:63545056-63545075 Msa0563230:intron 40.0%
! ACAATCATATGGGTTGCTTC+AGG - chr4_1:63545099-63545118 Msa0563230:intron 40.0%
TAGGCACATATCCTCCAAAA+GGG + chr4_1:63545155-63545174 None:intergenic 40.0%
TTAGGCACATATCCTCCAAA+AGG + chr4_1:63545156-63545175 None:intergenic 40.0%
! GAGGGATAAGTTTTCTCATG+AGG + chr4_1:63545188-63545207 None:intergenic 40.0%
GTTGAGTAGGCAATGATGAT+AGG + chr4_1:63545263-63545282 None:intergenic 40.0%
! TTGGTAGCTTGAAGTTGAGT+AGG + chr4_1:63545276-63545295 None:intergenic 40.0%
TACCAAAGTAATGGCTGTTC+AGG - chr4_1:63545290-63545309 Msa0563230:intron 40.0%
TACTAGACTTGAGGAGATAG+AGG - chr4_1:63545422-63545441 Msa0563230:intron 40.0%
TTGAAAAGTAGAACTGGTGC+AGG - chr4_1:63545477-63545496 Msa0563230:intron 40.0%
GGAAGCAAAAGTTCATAAGG+AGG + chr4_1:63545507-63545526 None:intergenic 40.0%
! GAACTTTTGCTTCCTTTGTC+AGG - chr4_1:63545513-63545532 Msa0563230:intron 40.0%
TCGATCAATTTCGATTGCCT+TGG - chr4_1:63545582-63545601 Msa0563230:intron 40.0%
TTGCACAAGATCTATGGTCA+AGG - chr4_1:63545809-63545828 Msa0563230:CDS 40.0%
ACAAGATCTATGGTCAAGGT+AGG - chr4_1:63545813-63545832 Msa0563230:CDS 40.0%
CAAGATCTATGGTCAAGGTA+GGG - chr4_1:63545814-63545833 Msa0563230:CDS 40.0%
AAGATCTATGGTCAAGGTAG+GGG - chr4_1:63545815-63545834 Msa0563230:CDS 40.0%
AAGAGGAATTGCATCTCCAA+GGG + chr4_1:63545952-63545971 None:intergenic 40.0%
TAAGAGGAATTGCATCTCCA+AGG + chr4_1:63545953-63545972 None:intergenic 40.0%
ACCGGAGGAGAATCATTTCA+CGG - chr4_1:63538117-63538136 Msa0563230:three_prime_UTR 45.0%
ACCGTGAAATGATTCTCCTC+CGG + chr4_1:63538121-63538140 None:intergenic 45.0%
CAAGTTCAAGCAGTGATCAG+TGG - chr4_1:63538161-63538180 Msa0563230:three_prime_UTR 45.0%
TCGTTACAAAGTAGCTCGAG+TGG - chr4_1:63538239-63538258 Msa0563230:three_prime_UTR 45.0%
TTACAAAGTAGCTCGAGTGG+TGG - chr4_1:63538242-63538261 Msa0563230:three_prime_UTR 45.0%
TAGTGTGGTTGAGGAGTTTG+AGG - chr4_1:63538328-63538347 Msa0563230:three_prime_UTR 45.0%
TGAGGAGTTTGAGGATCAGT+TGG - chr4_1:63538337-63538356 Msa0563230:three_prime_UTR 45.0%
GTTAGTGAACTCATAGACCC+TGG - chr4_1:63538404-63538423 Msa0563230:intron 45.0%
!!! GTTGAGAGTAGCTGGTCTTT+TGG - chr4_1:63538930-63538949 Msa0563230:CDS 45.0%
!!! GTCTTTTGGTTTCATCCGTG+AGG - chr4_1:63538944-63538963 Msa0563230:CDS 45.0%
GAGAGGATCTTAACTCCTCA+CGG + chr4_1:63538962-63538981 None:intergenic 45.0%
TGGTAGGACCCACTTAATAG+TGG - chr4_1:63539063-63539082 Msa0563230:CDS 45.0%
GGTAGGACCCACTTAATAGT+GGG - chr4_1:63539064-63539083 Msa0563230:CDS 45.0%
AGTGGGTCCCACTATTAAGT+GGG + chr4_1:63539074-63539093 None:intergenic 45.0%
! TAGTGGGTCCCACTATTAAG+TGG + chr4_1:63539075-63539094 None:intergenic 45.0%
TATTTAGGGGACTCACGGAT+GGG + chr4_1:63539168-63539187 None:intergenic 45.0%
GAGTCCCCTAAATAGTTCAG+CGG - chr4_1:63539174-63539193 Msa0563230:CDS 45.0%
! TGCCATTTCCGTCAAAGAAG+GGG - chr4_1:63540555-63540574 Msa0563230:CDS 45.0%
ATCCCCTTCTTTGACGGAAA+TGG + chr4_1:63540560-63540579 None:intergenic 45.0%
GTATGCATCCCCTTCTTTGA+CGG + chr4_1:63540566-63540585 None:intergenic 45.0%
GTCAAAGAAGGGGATGCATA+CGG - chr4_1:63540565-63540584 Msa0563230:CDS 45.0%
GTTTACTCCAAGCCATCAAG+TGG - chr4_1:63540587-63540606 Msa0563230:CDS 45.0%
ATCAAGTGGGTGGCCAAATT+GGG - chr4_1:63540601-63540620 Msa0563230:intron 45.0%
!!! ACTCGTTGGCAGGGTTTTTT+AGG - chr4_1:63540751-63540770 Msa0563230:CDS 45.0%
!!! GGCAGGGTTTTTTAGGAGTT+AGG - chr4_1:63540758-63540777 Msa0563230:CDS 45.0%
ATCCAAGTGGGTAACTGGTA+AGG - chr4_1:63541494-63541513 Msa0563230:CDS 45.0%
TCCAAGTGGGTAACTGGTAA+GGG - chr4_1:63541495-63541514 Msa0563230:CDS 45.0%
TGGAATCTTACGTAGGAGGT+TGG - chr4_1:63541752-63541771 Msa0563230:CDS 45.0%
TTCACAGTGCCAAGTGACTT+TGG - chr4_1:63541823-63541842 Msa0563230:CDS 45.0%
GGTAATGAGAATAGCAGCTG+GGG + chr4_1:63541851-63541870 None:intergenic 45.0%
! CACTTCTTCAAAGGTGTGTG+AGG + chr4_1:63542142-63542161 None:intergenic 45.0%
TTACCATCACAAACACCACC+TGG - chr4_1:63542224-63542243 Msa0563230:CDS 45.0%
ATACCAGGTGGTGTTTGTGA+TGG + chr4_1:63542230-63542249 None:intergenic 45.0%
CGAAGATCTTTGATACCAGG+TGG + chr4_1:63542242-63542261 None:intergenic 45.0%
CGTCGAAGATCTTTGATACC+AGG + chr4_1:63542245-63542264 None:intergenic 45.0%
!! GTGAGGATTTGCTAAGCACA+AGG - chr4_1:63542264-63542283 Msa0563230:CDS 45.0%
!! GAGGATTTGCTAAGCACAAG+GGG - chr4_1:63542266-63542285 Msa0563230:CDS 45.0%
GGGTTGCCTAACTCATTGTA+GGG + chr4_1:63542350-63542369 None:intergenic 45.0%
AGGGTTGCCTAACTCATTGT+AGG + chr4_1:63542351-63542370 None:intergenic 45.0%
GTTAGGCAACCCTGATAAAG+AGG - chr4_1:63542358-63542377 Msa0563230:CDS 45.0%
CTCTCATGATCTCCAATGAC+TGG + chr4_1:63542395-63542414 None:intergenic 45.0%
! AAACAGGATGCATTTGCTGC+TGG - chr4_1:63542653-63542672 Msa0563230:intron 45.0%
GGTGGGAAAAGTGATGAAAC+AGG - chr4_1:63542835-63542854 Msa0563230:intron 45.0%
! TACTGGATTGACTCCAGCTA+AGG + chr4_1:63543390-63543409 None:intergenic 45.0%
GAACTACTGGAGCAAGAACT+TGG - chr4_1:63543572-63543591 Msa0563230:intron 45.0%
TTTACACTGACAGGCTATGG+AGG - chr4_1:63543700-63543719 Msa0563230:intron 45.0%
GTTAAGGACTCATGCATGCA+TGG - chr4_1:63544145-63544164 Msa0563230:intron 45.0%
TCCTCATACGCGCTATACAA+TGG - chr4_1:63544232-63544251 Msa0563230:intron 45.0%
TCCATTGTATAGCGCGTATG+AGG + chr4_1:63544236-63544255 None:intergenic 45.0%
CTCTTCCGGCAGATCTTATT+CGG - chr4_1:63544387-63544406 Msa0563230:intron 45.0%
TACCTCCGAATAAGATCTGC+CGG + chr4_1:63544395-63544414 None:intergenic 45.0%
GGTTCCTATAAAAGGTGGCA+AGG - chr4_1:63544686-63544705 Msa0563230:intron 45.0%
CTCTATGGAATGTGCTTTCC+AGG - chr4_1:63544800-63544819 Msa0563230:intron 45.0%
CTATGGAATGTGCTTTCCAG+GGG - chr4_1:63544802-63544821 Msa0563230:intron 45.0%
!! TTACACCACAGGGCATTGAA+GGG + chr4_1:63544843-63544862 None:intergenic 45.0%
!! TTTACACCACAGGGCATTGA+AGG + chr4_1:63544844-63544863 None:intergenic 45.0%
GAAGTCCATCTGCAGCATAA+GGG + chr4_1:63544885-63544904 None:intergenic 45.0%
AGAAGTCCATCTGCAGCATA+AGG + chr4_1:63544886-63544905 None:intergenic 45.0%
! CTGCAGATGGACTTCTAATC+TGG - chr4_1:63544890-63544909 Msa0563230:intron 45.0%
TGATTTCACTCCACCACTCT+TGG + chr4_1:63544996-63545015 None:intergenic 45.0%
! GTATCTAGTTTAGGCCACCA+AGG + chr4_1:63545051-63545070 None:intergenic 45.0%
! TTCGGACAATACCCTTTTGG+AGG - chr4_1:63545141-63545160 Msa0563230:intron 45.0%
! GTTTTCTCATGAGGGTAGGA+CGG + chr4_1:63545179-63545198 None:intergenic 45.0%
GTCCTGAACAGCCATTACTT+TGG + chr4_1:63545295-63545314 None:intergenic 45.0%
!! TTCCCCTGACGAAGAGTATT+TGG - chr4_1:63545329-63545348 Msa0563230:intron 45.0%
!! TCCCCTGACGAAGAGTATTT+GGG - chr4_1:63545330-63545349 Msa0563230:intron 45.0%
ACCCAAATACTCTTCGTCAG+GGG + chr4_1:63545334-63545353 None:intergenic 45.0%
GACCCAAATACTCTTCGTCA+GGG + chr4_1:63545335-63545354 None:intergenic 45.0%
TGACCCAAATACTCTTCGTC+AGG + chr4_1:63545336-63545355 None:intergenic 45.0%
AGAGGAATTGCATCTCCAAG+GGG + chr4_1:63545951-63545970 None:intergenic 45.0%
!!! AATTAAATTTTAAACTTTTT+TGG - chr4_1:63540174-63540193 Msa0563230:CDS 5.0%
!!! ATTAAATTTTAAACTTTTTT+GGG - chr4_1:63540175-63540194 Msa0563230:CDS 5.0%
CTCTTATCGGAGAACACCGA+CGG + chr4_1:63538095-63538114 None:intergenic 50.0%
! TGTTCTCCGATAAGAGGCAC+CGG - chr4_1:63538099-63538118 Msa0563230:three_prime_UTR 50.0%
TTTCACGGTCATCTGAACGG+CGG - chr4_1:63538132-63538151 Msa0563230:three_prime_UTR 50.0%
GTTCAAGCAGTGATCAGTGG+CGG - chr4_1:63538164-63538183 Msa0563230:three_prime_UTR 50.0%
! TTGCTCACTTTGCTGTCCAC+CGG + chr4_1:63538215-63538234 None:intergenic 50.0%
GTGGACAGCAAAGTGAGCAA+TGG - chr4_1:63538215-63538234 Msa0563230:three_prime_UTR 50.0%
!! GGAGAGAGTACCAAATGGAG+AGG + chr4_1:63538979-63538998 None:intergenic 50.0%
CTATTTAGGGGACTCACGGA+TGG + chr4_1:63539169-63539188 None:intergenic 50.0%
CAATTTGGCCACCCACTTGA+TGG + chr4_1:63540602-63540621 None:intergenic 50.0%
CATCAAGTGGGTGGCCAAAT+TGG - chr4_1:63540600-63540619 Msa0563230:intron 50.0%
TTATGTCCAGACTCGTTGGC+AGG - chr4_1:63540741-63540760 Msa0563230:CDS 50.0%
TATGTCCAGACTCGTTGGCA+GGG - chr4_1:63540742-63540761 Msa0563230:CDS 50.0%
AAAAACCCTGCCAACGAGTC+TGG + chr4_1:63540750-63540769 None:intergenic 50.0%
AGCCCATGAATTGACAAGGG+TGG - chr4_1:63540863-63540882 Msa0563230:intron 50.0%
GTCTGCCCCTTGAAAAGTTG+TGG - chr4_1:63541077-63541096 Msa0563230:intron 50.0%
TCCCTTACCAGTTACCCACT+TGG + chr4_1:63541499-63541518 None:intergenic 50.0%
GCAGCGGTTAATATCTCCGT+CGG + chr4_1:63541593-63541612 None:intergenic 50.0%
AGCGTGGAATCTTACGTAGG+AGG - chr4_1:63541748-63541767 Msa0563230:CDS 50.0%
TTGCTAAGCACAAGGGGAAG+CGG - chr4_1:63542272-63542291 Msa0563230:CDS 50.0%
GTTCTACAGCGACGAGGATA+AGG + chr4_1:63542419-63542438 None:intergenic 50.0%
TATCCTCGTCGCTGTAGAAC+CGG - chr4_1:63542419-63542438 Msa0563230:intron 50.0%
CATCTCGCGGCACATAAACA+GGG + chr4_1:63542616-63542635 None:intergenic 50.0%
TCATCTCGCGGCACATAAAC+AGG + chr4_1:63542617-63542636 None:intergenic 50.0%
ACCCAAACTTGCAGCCACTA+TGG - chr4_1:63542706-63542725 Msa0563230:intron 50.0%
GCCATAGTGGCTGCAAGTTT+GGG + chr4_1:63542710-63542729 None:intergenic 50.0%
!! AGGTCTTCAGTTCTGGAGAG+CGG - chr4_1:63542855-63542874 Msa0563230:intron 50.0%
TGCGGGACAACGAATTTGCA+AGG - chr4_1:63543360-63543379 Msa0563230:intron 50.0%
TTTGCAAGGCAAGCCTTAGC+TGG - chr4_1:63543374-63543393 Msa0563230:intron 50.0%
!! GGATCTAGTTTGCTGCGGAT+TGG + chr4_1:63543515-63543534 None:intergenic 50.0%
TCTGGAGGGCCATAGATAGT+TGG + chr4_1:63543536-63543555 None:intergenic 50.0%
CTACTGGAGCAAGAACTTGG+TGG - chr4_1:63543575-63543594 Msa0563230:intron 50.0%
AGATGAACTCTTTGCCCGAG+AGG - chr4_1:63543777-63543796 Msa0563230:intron 50.0%
GAGGCATAAGCTTTCCTCTC+GGG + chr4_1:63543794-63543813 None:intergenic 50.0%
! GGAGGCATAAGCTTTCCTCT+CGG + chr4_1:63543795-63543814 None:intergenic 50.0%
AGAGGAAAGCTTATGCCTCC+CGG - chr4_1:63543795-63543814 Msa0563230:intron 50.0%
AATGAAGAGAATCGTCCGGG+AGG + chr4_1:63543813-63543832 None:intergenic 50.0%
AGCTATAGGACGCAGAACAC+CGG + chr4_1:63543843-63543862 None:intergenic 50.0%
ATGCCACAGCACACTGGATT+TGG - chr4_1:63543930-63543949 Msa0563230:intron 50.0%
CTTCCAAATCCAGTGTGCTG+TGG + chr4_1:63543936-63543955 None:intergenic 50.0%
! CAGCTGCTTACAAGAGCATG+TGG - chr4_1:63544348-63544367 Msa0563230:intron 50.0%
TTCCGGCAGATCTTATTCGG+AGG - chr4_1:63544390-63544409 Msa0563230:intron 50.0%
GACTACCCTTATGCTGCAGA+TGG - chr4_1:63544877-63544896 Msa0563230:intron 50.0%
ATGTTGAGCTCCAAGAGTGG+TGG - chr4_1:63544983-63545002 Msa0563230:intron 50.0%
TTGCTTCCTTTGTCAGGACC+CGG - chr4_1:63545519-63545538 Msa0563230:intron 50.0%
GAATTGCATCTCCAAGGGGT+TGG + chr4_1:63545947-63545966 None:intergenic 50.0%
! CGTCGGTGTTCTCCGATAAG+AGG - chr4_1:63538093-63538112 Msa0563230:three_prime_UTR 55.0%
TCTCCTCCGGTGCCTCTTAT+CGG + chr4_1:63538108-63538127 None:intergenic 55.0%
CAAGACTACGACGTCGTCTC+CGG - chr4_1:63538193-63538212 Msa0563230:three_prime_UTR 55.0%
TCGAGTGGTGGCAGAAGCAA+CGG - chr4_1:63538254-63538273 Msa0563230:three_prime_UTR 55.0%
ACTCCAAGCCATCAAGTGGG+TGG - chr4_1:63540591-63540610 Msa0563230:CDS 55.0%
GCTGGGGATCCAAAGTCACT+TGG + chr4_1:63541835-63541854 None:intergenic 55.0%
ATCATCCTCCACGGCTTCAC+TGG - chr4_1:63541904-63541923 Msa0563230:intron 55.0%
TGAACTCTACCGGAGCGAGT+AGG + chr4_1:63542452-63542471 None:intergenic 55.0%
CGCCATAGTGGCTGCAAGTT+TGG + chr4_1:63542711-63542730 None:intergenic 55.0%
TGCGGCGAAGTAAGTGTCTG+AGG + chr4_1:63543881-63543900 None:intergenic 55.0%
TCCAGTGTGCTGTGGCATCA+TGG + chr4_1:63543928-63543947 None:intergenic 55.0%
GAATGTGCTTTCCAGGGGCA+TGG - chr4_1:63544807-63544826 Msa0563230:intron 55.0%
GAAGACCCTTCAATGCCCTG+TGG - chr4_1:63544835-63544854 Msa0563230:intron 55.0%
CGGATGTTGAGCTCCAAGAG+TGG - chr4_1:63544980-63544999 Msa0563230:intron 55.0%
CTCATGAGGGTAGGACGGTT+AGG + chr4_1:63545174-63545193 None:intergenic 55.0%
!! GGGGTTGGCTTAGTGAAGCA+TGG + chr4_1:63545932-63545951 None:intergenic 55.0%
GCTTCACTAAGCCAACCCCT+TGG - chr4_1:63545933-63545952 Msa0563230:CDS 55.0%
GACGGCGATCGGAGGAGTAA+CGG + chr4_1:63538077-63538096 None:intergenic 60.0%
GTTACTCCTCCGATCGCCGT+CGG - chr4_1:63538076-63538095 Msa0563230:three_prime_UTR 60.0%
!! TCTCCGATAAGAGGCACCGG+AGG - chr4_1:63538102-63538121 Msa0563230:three_prime_UTR 60.0%
! TGGCCACCCACTTGATGGCT+TGG + chr4_1:63540597-63540616 None:intergenic 60.0%
TGTGCCTCACATGCTGCCGA+CGG - chr4_1:63541574-63541593 Msa0563230:intron 60.0%
ATCTCCGTCGGCAGCATGTG+AGG + chr4_1:63541581-63541600 None:intergenic 60.0%
ATCCTCCACGGCTTCACTGG+AGG - chr4_1:63541907-63541926 Msa0563230:intron 60.0%
!! AAGCGGTGCTGCCCAAGAAC+AGG - chr4_1:63542289-63542308 Msa0563230:CDS 60.0%
CTTCCGGTTCTACAGCGACG+AGG + chr4_1:63542425-63542444 None:intergenic 60.0%
GGAGCGAGTAGGAGGTCTTC+CGG + chr4_1:63542441-63542460 None:intergenic 60.0%
GGAAGACCTCCTACTCGCTC+CGG - chr4_1:63542440-63542459 Msa0563230:intron 60.0%
ACTCTACCGGAGCGAGTAGG+AGG + chr4_1:63542449-63542468 None:intergenic 60.0%
CGCGGCACATAAACAGGGTG+TGG + chr4_1:63542611-63542630 None:intergenic 60.0%
GCCATGATGCCACAGCACAC+TGG - chr4_1:63543924-63543943 Msa0563230:intron 60.0%
GTCTTCTACTGCCATGCCCC+TGG + chr4_1:63544821-63544840 None:intergenic 60.0%
GTTGCTCCGGGTCCTGACAA+AGG + chr4_1:63545528-63545547 None:intergenic 60.0%
TTGTCAGGACCCGGAGCAAC+TGG - chr4_1:63545528-63545547 Msa0563230:intron 60.0%
ACTCCACGACCAGTTGCTCC+GGG + chr4_1:63545540-63545559 None:intergenic 60.0%
GACTCCACGACCAGTTGCTC+CGG + chr4_1:63545541-63545560 None:intergenic 60.0%
AGAACACCGACGGCGATCGG+AGG + chr4_1:63538085-63538104 None:intergenic 65.0%
CGGAGAACACCGACGGCGAT+CGG + chr4_1:63538088-63538107 None:intergenic 65.0%
GACTACGACGTCGTCTCCGG+TGG - chr4_1:63538196-63538215 Msa0563230:three_prime_UTR 65.0%
GTCCTCCAGTGAAGCCGTGG+AGG + chr4_1:63541912-63541931 None:intergenic 65.0%
TGGGTCCTCCAGTGAAGCCG+TGG + chr4_1:63541915-63541934 None:intergenic 65.0%
GGACCCGGAGCAACTGGTCG+TGG - chr4_1:63545534-63545553 Msa0563230:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 63537953 63546168 63537953 ID=Msa0563230;Name=Msa0563230
chr4_1 mRNA 63537953 63546168 63537953 ID=Msa0563230-mRNA-1;Parent=Msa0563230;Name=Msa0563230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=100|1|1|1|0.88|0.8|10|551|916
chr4_1 exon 63537953 63538397 63537953 ID=Msa0563230-mRNA-1:exon:20203;Parent=Msa0563230-mRNA-1
chr4_1 exon 63538434 63539299 63538434 ID=Msa0563230-mRNA-1:exon:20202;Parent=Msa0563230-mRNA-1
chr4_1 exon 63539710 63539976 63539710 ID=Msa0563230-mRNA-1:exon:20201;Parent=Msa0563230-mRNA-1
chr4_1 exon 63540107 63540408 63540107 ID=Msa0563230-mRNA-1:exon:20200;Parent=Msa0563230-mRNA-1
chr4_1 exon 63540508 63540615 63540508 ID=Msa0563230-mRNA-1:exon:20199;Parent=Msa0563230-mRNA-1
chr4_1 exon 63540694 63540779 63540694 ID=Msa0563230-mRNA-1:exon:20198;Parent=Msa0563230-mRNA-1
chr4_1 exon 63541210 63541542 63541210 ID=Msa0563230-mRNA-1:exon:20197;Parent=Msa0563230-mRNA-1
chr4_1 exon 63541660 63541903 63541660 ID=Msa0563230-mRNA-1:exon:20196;Parent=Msa0563230-mRNA-1
chr4_1 exon 63542113 63542390 63542113 ID=Msa0563230-mRNA-1:exon:20195;Parent=Msa0563230-mRNA-1
chr4_1 exon 63545696 63546168 63545696 ID=Msa0563230-mRNA-1:exon:20194;Parent=Msa0563230-mRNA-1
chr4_1 five_prime_UTR 63546069 63546168 63546069 ID=Msa0563230-mRNA-1:five_prime_utr;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63545696 63546068 63545696 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63542113 63542390 63542113 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63541660 63541903 63541660 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63541210 63541542 63541210 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63540694 63540779 63540694 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63540508 63540615 63540508 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63540107 63540408 63540107 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63539710 63539976 63539710 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 CDS 63538540 63539299 63538540 ID=Msa0563230-mRNA-1:cds;Parent=Msa0563230-mRNA-1
chr4_1 three_prime_UTR 63538434 63538539 63538434 ID=Msa0563230-mRNA-1:three_prime_utr;Parent=Msa0563230-mRNA-1
chr4_1 three_prime_UTR 63537953 63538397 63537953 ID=Msa0563230-mRNA-1:three_prime_utr;Parent=Msa0563230-mRNA-1
Gene Sequence

>Msa0563230

ATGTTCGCAGTGAAGTCTAATCCGTTACTCCTCCGATCGCCGTCGGTGTTCTCCGATAAGAGGCACCGGAGGAGAATCATTTCACGGTCATCTGAACGGCGGAGCGTTCAAGTTCAAGCAGTGATCAGTGGCGGAGACAGCAAGACTACGACGTCGTCTCCGGTGGACAGCAAAGTGAGCAATGGCTCGTTACAAAGTAGCTCGAGTGGTGGCAGAAGCAACGGTGAAATGATAGAGGTGAAAGCAGTGGTGATGATAAGAAAGAAAATGAAAGTTAGTGTGGTTGAGGAGTTTGAGGATCAGTTGGAGTATTTCATCAATGGTGTTGGTCAAGGGATACAGATTCAGCTTGTTAGTGAACTCATAGACCCTGCTACTAATAATGGAAAAAGCGTGGAATCTTACGTAGGAGGTTGGCTACCGAAGCCATCAAACATTCCATATGTTGTGGAATACTCTGCTGATTTCACAGTGCCAAGTGACTTTGGATCCCCAGCTGCTATTCTCATTACCAATCTTCGTTCAAAGGAGTTCCATTTATCGGAAATCATCCTCCACGGCTTCACTGGAGGACCCATTTTCTTTCCAGCTAACACATGGATTCATTCGCGTAACGATAACCCTCAAAGTAGAATCATATTCAAAAACCAAGCATATTTACCATCACAAACACCACCTGGTATCAAAGATCTTCGACGTGAGGATTTGCTAAGCACAAGGGGAAGCGGTGCTGCCCAAGAACAGGAAAGAAAATCACATGATAGAATCTATGATTATGCTCCCTACAATGAGTTAGGCAACCCTGATAAAGAGGAACTTGTTAGACCAGTCATTGGAGATCATGAGAGACCTTATCCTCGTCGCTGTAGAACCGGAAGACCTCCTACTCGCTCCGATCCACGATGTGAGACTAGAATTGAAAAGCCACACCCTGTTTATGTGCCGCGAGATGAAACTTTTGAAGAAATCAAACAGGATGCATTTGCTGCTGGAAGATTGAAAGCTGTGTTCCACAATCTCATACCCAAACTTGCAGCCACTATGGCGAATTCAGACATTCCTTTCAAGTGTTTCTCGGAGATTGACAAGCTTTATATTGATGGTGTTAATTTGGGAGATGAAGAGAATAAAGGGATAATAGAAAATCTCTTGGTGGGAAAAGTGATGAAACAGGTCTTCAGTTCTGGAGAGCGGTTGATGAAGTATGACATCCCAGCTATTGTAAAAGGAGATAGATTTGCTTGGTTGCGGGACAACGAATTTGCAAGGCAAGCCTTAGCTGGAGTCAATCCAGTAAATATTGAGCTATTGAAGGAGTTTCCAATCCGCAGCAAACTAGATCCAACTATCTATGGCCCTCCAGAATCAGCAATAACAAAGGAACTACTGGAGCAAGAACTTGGTGGAATAAGCTTGGAAAAGGCTATGGAGGAAAAGAGACTATTTATTATTGATTACCATGACATGCTTTTGCCATTCATCAAGAAGATGAACTCTTTGCCCGAGAGGAAAGCTTATGCCTCCCGGACGATTCTCTTCATTACAAAGGCCGGTGTTCTGCGTCCTATAGCTATTGAGCTTTCTCTTCCTCAGACACTTACTTCGCCGCAAAATAAAAAAGTTTACACACAAGGCCATGATGCCACAGCACACTGGATTTGGAAGTTAGCAAAAGCTCATGTTAGCTCAAATGATGCTGGCATCCATCAACTAGTAAATCATTGGTTAAGGACTCATGCATGCATGGAGCCGTATATAATTGCTACTCATAGACAGTTAAGCTCAATGCATCCTATTTACAAGTTGCTACATCCTCATACGCGCTATACAATGGAAATTAATGCACTTGCTCGGCAAAGTTTAATAAATGGAGGGGGTATAATTGAAGCATCTTTTAGTCCTGGAAAATATGCTTTGGAGCTTAGCTCAGCTGCTTACAAGAGCATGTGGAGATTTGATATGGAGTCTCTTCCGGCAGATCTTATTCGGAGGGGCATGGCAGTAGAAGACCCTTCAATGCCCTGTGGTGTAAAACTTGTGATTGATGACTACCCTTATGCTGCAGATGGACTTCTAATCTGGTCTGCCATTAAAGAATGGGTAGAATCTTATGTCAAACACTTCTATTCCGAATCAAATTCAATTGCATCGGATGTTGAGCTCCAAGAGTGGTGGAGTGAAATCAAGTGTAAGGGTCACGCTGACAAAAGAAATGAACCTTGGTGGCCTAAACTAGATACCAAAGAGGACCTATCTTTCATACTTACGACAATCATATGGGTTGCTTCAGGTCAACATGCTGCTATAAATTTCGGACAATACCCTTTTGGAGGATATGTGCCTAACCGTCCTACCCTCATGAGAAAACTTATCCCTCAAGAAAATGATTCTGATTATGAGAAGTTTATTCGAAATCCTCAACTTTTTTTCCTATCATCATTGCCTACTCAACTTCAAGCTACCAAAGTAATGGCTGTTCAGGACACGTTGTCGACTCATTCCCCTGACGAAGAGTATTTGGGTCAAGTGACTCATTTGCATAATCATTGGATCAATGATCAGGAAGTCCTGAAATTGTTTAGTAAATTCTCTACTAGACTTGAGGAGATAGAGGAAATTATAAATGCAAGAAATAAGGATCCAAGTTTGAAAAGTAGAACTGGTGCAGGTGTTCCTCCTTATGAACTTTTGCTTCCTTTGTCAGGACCCGGAGCAACTGGTCGTGGAGTCCCCAACAGTATATCTATATGA
Protein sequence

>Msa0563230

MFAVKSNPLLLRSPSVFSDKRHRRRIISRSSERRSVQVQAVISGGDSKTTTSSPVDSKVSNGSLQSSSSGGRSNGEMIEVKAVVMIRKKMKVSVVEEFEDQLEYFINGVGQGIQIQLVSELIDPATNNGKSVESYVGGWLPKPSNIPYVVEYSADFTVPSDFGSPAAILITNLRSKEFHLSEIILHGFTGGPIFFPANTWIHSRNDNPQSRIIFKNQAYLPSQTPPGIKDLRREDLLSTRGSGAAQEQERKSHDRIYDYAPYNELGNPDKEELVRPVIGDHERPYPRRCRTGRPPTRSDPRCETRIEKPHPVYVPRDETFEEIKQDAFAAGRLKAVFHNLIPKLAATMANSDIPFKCFSEIDKLYIDGVNLGDEENKGIIENLLVGKVMKQVFSSGERLMKYDIPAIVKGDRFAWLRDNEFARQALAGVNPVNIELLKEFPIRSKLDPTIYGPPESAITKELLEQELGGISLEKAMEEKRLFIIDYHDMLLPFIKKMNSLPERKAYASRTILFITKAGVLRPIAIELSLPQTLTSPQNKKVYTQGHDATAHWIWKLAKAHVSSNDAGIHQLVNHWLRTHACMEPYIIATHRQLSSMHPIYKLLHPHTRYTMEINALARQSLINGGGIIEASFSPGKYALELSSAAYKSMWRFDMESLPADLIRRGMAVEDPSMPCGVKLVIDDYPYAADGLLIWSAIKEWVESYVKHFYSESNSIASDVELQEWWSEIKCKGHADKRNEPWWPKLDTKEDLSFILTTIIWVASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQENDSDYEKFIRNPQLFFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVTHLHNHWINDQEVLKLFSKFSTRLEEIEEIINARNKDPSLKSRTGAGVPPYELLLPLSGPGATGRGVPNSISI*