Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1418500 | sp|Q41640|RAB7_VIGAC | 88.940 | 217 | 12 | 3 | 1 | 216 | 1 | 206 | 1.27e-139 | 391 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1418500 | A0A072VQC0 | 94.907 | 216 | 2 | 1 | 1 | 216 | 1 | 207 | 1.04e-148 | 421 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0016540 | Msa1418500 | 0.807896 | 4.039681e-50 | -8.615850e-47 |
Msa0032020 | Msa1418500 | 0.837395 | 5.330087e-57 | -8.615850e-47 |
Msa0037410 | Msa1418500 | 0.901444 | 2.663927e-78 | -8.615850e-47 |
Msa0062350 | Msa1418500 | 0.813138 | 2.978633e-51 | -8.615850e-47 |
Msa0078360 | Msa1418500 | 0.807666 | 4.522028e-50 | -8.615850e-47 |
Msa1360960 | Msa1418500 | 0.805505 | 1.292648e-49 | -8.615850e-47 |
Msa1373170 | Msa1418500 | 0.829099 | 6.220291e-55 | -8.615850e-47 |
Msa1391480 | Msa1418500 | 0.822718 | 2.039485e-53 | -8.615850e-47 |
Msa1398790 | Msa1418500 | 0.823346 | 1.455361e-53 | -8.615850e-47 |
Msa1403570 | Msa1418500 | 0.842186 | 3.015052e-58 | -8.615850e-47 |
Msa0656810 | Msa1418500 | 0.803133 | 4.031553e-49 | -8.615850e-47 |
Msa0142410 | Msa1418500 | 0.823681 | 1.215100e-53 | -8.615850e-47 |
Msa0168090 | Msa1418500 | 0.814098 | 1.831625e-51 | -8.615850e-47 |
Msa0178120 | Msa1418500 | 0.900245 | 8.886853e-78 | -8.615850e-47 |
Msa0196190 | Msa1418500 | 0.804961 | 1.680374e-49 | -8.615850e-47 |
Msa0209140 | Msa1418500 | 0.813141 | 2.973754e-51 | -8.615850e-47 |
Msa0223170 | Msa1418500 | 0.802494 | 5.461728e-49 | -8.615850e-47 |
Msa1333560 | Msa1418500 | 0.800952 | 1.132141e-48 | -8.615850e-47 |
Msa0427780 | Msa1418500 | 0.817809 | 2.719180e-52 | -8.615850e-47 |
Msa0435370 | Msa1418500 | 0.805809 | 1.115577e-49 | -8.615850e-47 |
Msa1030080 | Msa1418500 | 0.809520 | 1.816585e-50 | -8.615850e-47 |
Msa0241830 | Msa1418500 | 0.801576 | 8.434902e-49 | -8.615850e-47 |
Msa0262480 | Msa1418500 | 0.812190 | 4.802966e-51 | -8.615850e-47 |
Msa0270210 | Msa1418500 | 0.835297 | 1.821402e-56 | -8.615850e-47 |
Msa0296250 | Msa1418500 | 0.803622 | 3.193273e-49 | -8.615850e-47 |
Msa0301520 | Msa1418500 | 0.825640 | 4.199477e-54 | -8.615850e-47 |
Msa0534750 | Msa1418500 | 0.807128 | 5.880000e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1418500 | MtrunA17_Chr1g0201121 | 94.907 | 216 | 2 | 1 | 1 | 216 | 1 | 207 | 2.01e-152 | 421 |
Msa1418500 | MtrunA17_Chr6g0466301 | 85.714 | 217 | 19 | 3 | 1 | 216 | 1 | 206 | 4.07e-134 | 375 |
Msa1418500 | MtrunA17_Chr6g0465491 | 85.714 | 217 | 19 | 3 | 1 | 216 | 1 | 206 | 4.07e-134 | 375 |
Msa1418500 | MtrunA17_Chr8g0383261 | 70.698 | 215 | 52 | 2 | 2 | 216 | 6 | 209 | 9.74e-112 | 318 |
Msa1418500 | MtrunA17_Chr2g0331691 | 71.429 | 210 | 44 | 2 | 4 | 213 | 6 | 199 | 2.68e-108 | 309 |
Msa1418500 | MtrunA17_Chr4g0004661 | 69.907 | 216 | 56 | 1 | 1 | 216 | 57 | 263 | 3.08e-108 | 311 |
Msa1418500 | MtrunA17_Chr4g0034871 | 69.266 | 218 | 53 | 3 | 1 | 216 | 1 | 206 | 2.15e-105 | 302 |
Msa1418500 | MtrunA17_Chr6g0466161 | 69.780 | 182 | 53 | 1 | 35 | 216 | 8 | 187 | 2.61e-87 | 256 |
Msa1418500 | MtrunA17_Chr6g0465471 | 69.231 | 182 | 54 | 1 | 35 | 216 | 8 | 187 | 1.28e-86 | 254 |
Msa1418500 | MtrunA17_Chr6g0466431 | 61.345 | 119 | 28 | 1 | 1 | 119 | 1 | 101 | 1.11e-47 | 152 |
Msa1418500 | MtrunA17_Chr6g0465611 | 61.345 | 119 | 28 | 1 | 1 | 119 | 1 | 101 | 1.11e-47 | 152 |
Msa1418500 | MtrunA17_Chr2g0276941 | 38.919 | 185 | 90 | 5 | 1 | 178 | 1 | 169 | 2.63e-36 | 127 |
Msa1418500 | MtrunA17_Chr8g0351861 | 39.535 | 172 | 88 | 4 | 8 | 179 | 16 | 171 | 7.84e-36 | 125 |
Msa1418500 | MtrunA17_Chr1g0174281 | 40.805 | 174 | 87 | 4 | 8 | 181 | 15 | 172 | 8.97e-36 | 125 |
Msa1418500 | MtrunA17_Chr7g0214241 | 38.674 | 181 | 95 | 4 | 8 | 188 | 15 | 179 | 2.33e-35 | 124 |
Msa1418500 | MtrunA17_Chr4g0040781 | 38.596 | 171 | 89 | 4 | 8 | 178 | 13 | 167 | 5.41e-35 | 123 |
Msa1418500 | MtrunA17_Chr2g0327911 | 38.636 | 176 | 94 | 4 | 8 | 183 | 15 | 176 | 6.31e-35 | 123 |
Msa1418500 | MtrunA17_Chr4g0046261 | 37.427 | 171 | 91 | 4 | 8 | 178 | 13 | 167 | 1.45e-34 | 122 |
Msa1418500 | MtrunA17_Chr4g0032201 | 33.641 | 217 | 118 | 6 | 8 | 214 | 12 | 212 | 1.64e-34 | 122 |
Msa1418500 | MtrunA17_Chr8g0381841 | 37.931 | 174 | 92 | 4 | 8 | 181 | 17 | 174 | 2.38e-34 | 122 |
Msa1418500 | MtrunA17_Chr2g0325091 | 39.429 | 175 | 88 | 5 | 8 | 181 | 11 | 168 | 3.40e-34 | 121 |
Msa1418500 | MtrunA17_Chr7g0231131 | 36.652 | 221 | 111 | 7 | 8 | 216 | 15 | 218 | 4.34e-34 | 121 |
Msa1418500 | MtrunA17_Chr4g0055081 | 32.547 | 212 | 122 | 4 | 10 | 216 | 11 | 206 | 6.14e-34 | 120 |
Msa1418500 | MtrunA17_Chr1g0182301 | 35.096 | 208 | 118 | 5 | 8 | 215 | 15 | 205 | 9.05e-34 | 120 |
Msa1418500 | MtrunA17_Chr2g0283131 | 37.427 | 171 | 91 | 4 | 8 | 178 | 13 | 167 | 1.15e-33 | 120 |
Msa1418500 | MtrunA17_Chr8g0382221 | 34.272 | 213 | 118 | 5 | 10 | 216 | 11 | 207 | 1.32e-33 | 119 |
Msa1418500 | MtrunA17_Chr1g0212521 | 34.597 | 211 | 119 | 6 | 8 | 216 | 15 | 208 | 1.75e-33 | 119 |
Msa1418500 | MtrunA17_Chr3g0123821 | 37.931 | 174 | 92 | 4 | 8 | 181 | 16 | 173 | 1.80e-33 | 119 |
Msa1418500 | MtrunA17_Chr3g0112681 | 36.207 | 174 | 95 | 4 | 8 | 181 | 12 | 169 | 2.28e-33 | 119 |
Msa1418500 | MtrunA17_Chr1g0182321 | 34.615 | 208 | 119 | 5 | 8 | 215 | 15 | 205 | 4.37e-33 | 118 |
Msa1418500 | MtrunA17_Chr5g0400131 | 32.394 | 213 | 122 | 5 | 10 | 216 | 11 | 207 | 6.67e-33 | 117 |
Msa1418500 | MtrunA17_Chr2g0315551 | 38.012 | 171 | 90 | 5 | 8 | 178 | 13 | 167 | 8.44e-33 | 117 |
Msa1418500 | MtrunA17_Chr4g0030911 | 34.634 | 205 | 117 | 5 | 8 | 212 | 15 | 202 | 1.24e-32 | 117 |
Msa1418500 | MtrunA17_Chr8g0390561 | 37.173 | 191 | 102 | 6 | 10 | 198 | 11 | 185 | 1.33e-32 | 116 |
Msa1418500 | MtrunA17_Chr3g0123971 | 33.019 | 212 | 121 | 4 | 10 | 216 | 11 | 206 | 1.38e-32 | 117 |
Msa1418500 | MtrunA17_Chr7g0263071 | 37.500 | 176 | 95 | 4 | 8 | 183 | 15 | 175 | 2.11e-32 | 116 |
Msa1418500 | MtrunA17_Chr7g0234201 | 36.464 | 181 | 99 | 4 | 8 | 188 | 13 | 177 | 2.17e-32 | 116 |
Msa1418500 | MtrunA17_Chr2g0276931 | 35.429 | 175 | 97 | 4 | 8 | 182 | 9 | 167 | 3.00e-32 | 115 |
Msa1418500 | MtrunA17_Chr6g0458081 | 37.017 | 181 | 98 | 4 | 8 | 188 | 6 | 170 | 3.73e-32 | 115 |
Msa1418500 | MtrunA17_Chr4g0055651 | 36.571 | 175 | 95 | 4 | 8 | 182 | 8 | 166 | 6.40e-32 | 115 |
Msa1418500 | MtrunA17_Chr8g0335471 | 36.571 | 175 | 95 | 4 | 8 | 182 | 8 | 166 | 9.97e-32 | 114 |
Msa1418500 | MtrunA17_Chr7g0250531 | 36.158 | 177 | 97 | 4 | 8 | 184 | 8 | 168 | 2.08e-31 | 114 |
Msa1418500 | MtrunA17_Chr5g0433561 | 37.356 | 174 | 93 | 4 | 10 | 183 | 12 | 169 | 3.37e-31 | 113 |
Msa1418500 | MtrunA17_Chr2g0319951 | 36.257 | 171 | 93 | 4 | 8 | 178 | 13 | 167 | 8.40e-31 | 112 |
Msa1418500 | MtrunA17_Chr3g0109721 | 37.356 | 174 | 93 | 4 | 10 | 183 | 12 | 169 | 1.70e-30 | 111 |
Msa1418500 | MtrunA17_Chr6g0465601 | 64.000 | 75 | 27 | 0 | 118 | 192 | 4 | 78 | 2.10e-30 | 107 |
Msa1418500 | MtrunA17_Chr2g0290891 | 33.182 | 220 | 118 | 7 | 8 | 214 | 6 | 209 | 2.57e-30 | 111 |
Msa1418500 | MtrunA17_Chr6g0466421 | 67.606 | 71 | 23 | 0 | 121 | 191 | 17 | 87 | 3.08e-30 | 107 |
Msa1418500 | MtrunA17_Chr7g0275991 | 36.047 | 172 | 94 | 4 | 8 | 179 | 20 | 175 | 3.61e-30 | 111 |
Msa1418500 | MtrunA17_Chr8g0349711 | 33.333 | 186 | 108 | 4 | 3 | 188 | 1 | 170 | 4.70e-30 | 110 |
Msa1418500 | MtrunA17_Chr1g0189361 | 35.795 | 176 | 97 | 3 | 8 | 183 | 14 | 173 | 5.42e-30 | 110 |
Msa1418500 | MtrunA17_Chr8g0349681 | 36.111 | 180 | 99 | 4 | 9 | 188 | 176 | 339 | 5.55e-29 | 113 |
Msa1418500 | MtrunA17_Chr8g0349681 | 33.155 | 187 | 109 | 4 | 8 | 194 | 384 | 554 | 3.10e-26 | 105 |
Msa1418500 | MtrunA17_Chr8g0349681 | 35.227 | 176 | 98 | 5 | 3 | 178 | 8 | 167 | 1.00e-25 | 104 |
Msa1418500 | MtrunA17_Chr6g0482721 | 35.465 | 172 | 95 | 4 | 8 | 179 | 12 | 167 | 5.58e-29 | 107 |
Msa1418500 | MtrunA17_Chr8g0346421 | 35.465 | 172 | 95 | 4 | 8 | 179 | 26 | 181 | 5.85e-29 | 108 |
Msa1418500 | MtrunA17_Chr8g0392931 | 34.359 | 195 | 110 | 5 | 8 | 200 | 14 | 192 | 2.19e-28 | 106 |
Msa1418500 | MtrunA17_Chr1g0199331 | 35.795 | 176 | 96 | 5 | 9 | 183 | 32 | 191 | 8.09e-27 | 102 |
Msa1418500 | MtrunA17_Chr8g0384311 | 32.075 | 212 | 123 | 7 | 8 | 214 | 13 | 208 | 2.65e-24 | 95.5 |
Msa1418500 | MtrunA17_Chr7g0265001 | 35.088 | 171 | 93 | 6 | 10 | 178 | 18 | 172 | 1.03e-23 | 94.4 |
Msa1418500 | MtrunA17_Chr3g0130271 | 36.047 | 172 | 94 | 6 | 8 | 178 | 12 | 168 | 1.74e-23 | 93.6 |
Msa1418500 | MtrunA17_Chr1g0159481 | 35.465 | 172 | 94 | 6 | 8 | 178 | 17 | 172 | 3.28e-23 | 92.8 |
Msa1418500 | MtrunA17_Chr1g0180291 | 33.175 | 211 | 120 | 6 | 9 | 214 | 15 | 209 | 3.31e-23 | 92.8 |
Msa1418500 | MtrunA17_Chr1g0197331 | 36.628 | 172 | 92 | 6 | 9 | 178 | 16 | 172 | 8.46e-22 | 89.0 |
Msa1418500 | MtrunA17_Chr3g0138121 | 26.000 | 200 | 126 | 5 | 9 | 208 | 14 | 191 | 1.42e-21 | 88.6 |
Msa1418500 | MtrunA17_Chr3g0138101 | 26.000 | 200 | 126 | 5 | 9 | 208 | 14 | 191 | 1.42e-21 | 88.6 |
Msa1418500 | MtrunA17_Chr3g0138111 | 26.000 | 200 | 126 | 5 | 9 | 208 | 14 | 191 | 1.50e-21 | 88.6 |
Msa1418500 | MtrunA17_Chr6g0486041 | 29.592 | 196 | 114 | 6 | 8 | 194 | 6 | 186 | 5.05e-19 | 81.6 |
Msa1418500 | MtrunA17_Chr2g0326141 | 64.912 | 57 | 20 | 0 | 138 | 194 | 299 | 355 | 3.91e-18 | 81.6 |
Msa1418500 | MtrunA17_Chr2g0325101 | 29.231 | 195 | 112 | 7 | 1 | 186 | 1 | 178 | 3.64e-16 | 73.6 |
Msa1418500 | MtrunA17_Chr5g0405791 | 31.016 | 187 | 103 | 8 | 1 | 178 | 1 | 170 | 5.49e-16 | 73.2 |
Msa1418500 | MtrunA17_Chr8g0371501 | 31.551 | 187 | 102 | 8 | 1 | 178 | 1 | 170 | 9.10e-16 | 72.8 |
Msa1418500 | MtrunA17_Chr4g0037021 | 28.500 | 200 | 119 | 7 | 8 | 198 | 6 | 190 | 1.39e-15 | 72.0 |
Msa1418500 | MtrunA17_Chr3g0117931 | 28.889 | 180 | 104 | 6 | 8 | 178 | 8 | 172 | 7.29e-14 | 67.8 |
Msa1418500 | MtrunA17_Chr4g0046211 | 30.935 | 139 | 78 | 6 | 1 | 138 | 1 | 122 | 2.99e-12 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1418500 | AT4G09720.1 | 79.167 | 216 | 35 | 2 | 1 | 216 | 1 | 206 | 8.17e-126 | 354 |
Msa1418500 | AT1G22740.1 | 79.167 | 216 | 32 | 2 | 1 | 216 | 1 | 203 | 9.04e-123 | 346 |
Msa1418500 | AT4G09720.4 | 77.376 | 221 | 35 | 3 | 1 | 216 | 1 | 211 | 3.87e-122 | 345 |
Msa1418500 | AT4G09720.3 | 75.330 | 227 | 35 | 3 | 1 | 216 | 1 | 217 | 4.94e-122 | 345 |
Msa1418500 | AT1G52280.1 | 70.183 | 218 | 51 | 3 | 1 | 216 | 1 | 206 | 1.30e-107 | 308 |
Msa1418500 | AT3G16100.1 | 68.807 | 218 | 54 | 3 | 1 | 216 | 1 | 206 | 3.47e-106 | 304 |
Msa1418500 | AT4G09720.6 | 81.395 | 172 | 31 | 1 | 45 | 216 | 2 | 172 | 5.23e-104 | 298 |
Msa1418500 | AT4G09720.5 | 81.395 | 172 | 31 | 1 | 45 | 216 | 2 | 172 | 5.23e-104 | 298 |
Msa1418500 | AT4G09720.2 | 81.395 | 172 | 31 | 1 | 45 | 216 | 2 | 172 | 5.23e-104 | 298 |
Msa1418500 | AT3G18820.1 | 68.349 | 218 | 55 | 3 | 1 | 216 | 1 | 206 | 8.96e-104 | 298 |
Msa1418500 | AT2G21880.1 | 67.421 | 221 | 55 | 4 | 2 | 216 | 3 | 212 | 3.15e-103 | 297 |
Msa1418500 | AT1G49300.2 | 65.596 | 218 | 61 | 3 | 1 | 216 | 1 | 206 | 8.47e-100 | 288 |
Msa1418500 | AT1G49300.1 | 65.596 | 218 | 61 | 3 | 1 | 216 | 1 | 206 | 8.47e-100 | 288 |
Msa1418500 | AT2G21880.2 | 63.801 | 221 | 55 | 5 | 2 | 216 | 3 | 204 | 1.06e-93 | 273 |
Msa1418500 | AT2G21880.4 | 67.204 | 186 | 53 | 3 | 37 | 216 | 4 | 187 | 5.45e-88 | 258 |
Msa1418500 | AT2G21880.3 | 67.204 | 186 | 53 | 3 | 37 | 216 | 4 | 187 | 5.45e-88 | 258 |
Msa1418500 | AT5G39620.1 | 53.271 | 214 | 85 | 3 | 6 | 216 | 3 | 204 | 1.04e-74 | 224 |
Msa1418500 | AT3G12160.1 | 37.104 | 221 | 111 | 6 | 8 | 216 | 15 | 219 | 3.80e-38 | 132 |
Msa1418500 | AT5G47960.1 | 36.199 | 221 | 111 | 7 | 8 | 214 | 15 | 219 | 1.12e-36 | 128 |
Msa1418500 | AT2G33870.1 | 39.766 | 171 | 87 | 5 | 8 | 178 | 13 | 167 | 6.22e-36 | 126 |
Msa1418500 | AT1G28550.1 | 39.766 | 171 | 87 | 4 | 8 | 178 | 13 | 167 | 3.02e-35 | 124 |
Msa1418500 | AT5G60860.1 | 38.596 | 171 | 89 | 4 | 8 | 178 | 13 | 167 | 6.64e-35 | 123 |
Msa1418500 | AT1G09630.1 | 38.506 | 174 | 91 | 4 | 8 | 181 | 12 | 169 | 7.64e-35 | 123 |
Msa1418500 | AT3G15060.1 | 39.181 | 171 | 88 | 4 | 8 | 178 | 13 | 167 | 1.11e-34 | 123 |
Msa1418500 | AT5G45750.1 | 38.012 | 171 | 90 | 4 | 8 | 178 | 13 | 167 | 1.85e-34 | 122 |
Msa1418500 | AT5G59840.1 | 34.615 | 208 | 121 | 4 | 8 | 215 | 15 | 207 | 2.08e-34 | 122 |
Msa1418500 | AT3G53610.2 | 34.135 | 208 | 120 | 5 | 8 | 215 | 15 | 205 | 9.87e-34 | 120 |
Msa1418500 | AT3G53610.3 | 34.135 | 208 | 120 | 5 | 8 | 215 | 15 | 205 | 9.87e-34 | 120 |
Msa1418500 | AT3G53610.1 | 34.135 | 208 | 120 | 5 | 8 | 215 | 15 | 205 | 9.87e-34 | 120 |
Msa1418500 | AT5G59150.1 | 35.632 | 174 | 96 | 4 | 8 | 181 | 12 | 169 | 1.34e-33 | 120 |
Msa1418500 | AT2G44610.1 | 33.178 | 214 | 120 | 5 | 10 | 216 | 11 | 208 | 1.68e-33 | 119 |
Msa1418500 | AT1G05810.1 | 38.286 | 175 | 92 | 4 | 4 | 178 | 8 | 166 | 2.04e-33 | 119 |
Msa1418500 | AT3G46060.2 | 33.654 | 208 | 123 | 4 | 8 | 215 | 15 | 207 | 3.24e-33 | 119 |
Msa1418500 | AT3G46060.3 | 33.654 | 208 | 123 | 4 | 8 | 215 | 15 | 207 | 3.24e-33 | 119 |
Msa1418500 | AT3G46060.1 | 33.654 | 208 | 123 | 4 | 8 | 215 | 15 | 207 | 3.24e-33 | 119 |
Msa1418500 | AT1G05810.2 | 38.286 | 175 | 92 | 4 | 4 | 178 | 54 | 212 | 5.19e-33 | 120 |
Msa1418500 | AT2G31680.1 | 35.359 | 181 | 101 | 4 | 8 | 188 | 12 | 176 | 7.02e-33 | 118 |
Msa1418500 | AT1G07410.1 | 32.407 | 216 | 121 | 6 | 8 | 214 | 12 | 211 | 7.58e-33 | 118 |
Msa1418500 | AT4G18800.1 | 36.842 | 171 | 92 | 4 | 8 | 178 | 13 | 167 | 9.91e-33 | 117 |
Msa1418500 | AT1G18200.1 | 37.356 | 174 | 93 | 5 | 8 | 181 | 13 | 170 | 1.56e-32 | 117 |
Msa1418500 | AT2G43130.1 | 35.912 | 181 | 100 | 4 | 8 | 188 | 12 | 176 | 3.02e-32 | 116 |
Msa1418500 | AT3G11730.1 | 36.813 | 182 | 99 | 4 | 1 | 182 | 1 | 166 | 4.51e-32 | 115 |
Msa1418500 | AT1G16920.1 | 36.842 | 171 | 92 | 4 | 8 | 178 | 13 | 167 | 5.30e-32 | 116 |
Msa1418500 | AT3G46830.1 | 35.057 | 174 | 97 | 4 | 8 | 181 | 12 | 169 | 5.99e-32 | 115 |
Msa1418500 | AT3G46830.2 | 35.057 | 174 | 97 | 4 | 8 | 181 | 12 | 169 | 5.99e-32 | 115 |
Msa1418500 | AT4G17530.1 | 35.676 | 185 | 100 | 5 | 8 | 189 | 8 | 176 | 7.77e-32 | 115 |
Msa1418500 | AT5G65270.1 | 37.356 | 174 | 93 | 4 | 8 | 181 | 17 | 174 | 7.90e-32 | 115 |
Msa1418500 | AT4G18430.1 | 30.500 | 200 | 123 | 4 | 8 | 207 | 13 | 196 | 8.62e-32 | 115 |
Msa1418500 | AT5G47200.1 | 35.676 | 185 | 100 | 5 | 8 | 189 | 8 | 176 | 1.15e-31 | 114 |
Msa1418500 | AT1G73640.1 | 36.207 | 174 | 95 | 4 | 8 | 181 | 13 | 170 | 1.67e-31 | 115 |
Msa1418500 | AT4G35860.1 | 34.807 | 181 | 102 | 4 | 8 | 188 | 6 | 170 | 4.56e-31 | 113 |
Msa1418500 | AT4G39990.1 | 36.257 | 171 | 93 | 4 | 8 | 178 | 17 | 171 | 1.07e-30 | 112 |
Msa1418500 | AT5G10260.1 | 32.093 | 215 | 120 | 6 | 10 | 216 | 11 | 207 | 1.41e-30 | 112 |
Msa1418500 | AT4G17170.1 | 33.636 | 220 | 117 | 7 | 8 | 214 | 6 | 209 | 1.70e-30 | 112 |
Msa1418500 | AT1G02130.1 | 34.463 | 177 | 100 | 4 | 8 | 184 | 8 | 168 | 2.94e-30 | 111 |
Msa1418500 | AT3G09900.1 | 35.821 | 201 | 112 | 5 | 8 | 208 | 15 | 198 | 3.16e-30 | 111 |
Msa1418500 | AT3G07410.1 | 35.359 | 181 | 101 | 3 | 8 | 188 | 12 | 176 | 5.38e-30 | 110 |
Msa1418500 | AT4G39890.1 | 35.632 | 174 | 97 | 4 | 9 | 182 | 10 | 168 | 6.32e-30 | 110 |
Msa1418500 | AT5G03520.1 | 35.323 | 201 | 113 | 5 | 8 | 208 | 15 | 198 | 1.26e-29 | 110 |
Msa1418500 | AT1G06400.1 | 35.088 | 171 | 95 | 3 | 8 | 178 | 13 | 167 | 1.81e-29 | 109 |
Msa1418500 | AT2G22290.1 | 32.394 | 213 | 122 | 6 | 10 | 216 | 11 | 207 | 2.00e-29 | 109 |
Msa1418500 | AT1G01200.1 | 36.628 | 172 | 94 | 4 | 8 | 179 | 28 | 184 | 2.67e-29 | 109 |
Msa1418500 | AT4G17160.1 | 35.227 | 176 | 98 | 4 | 9 | 184 | 7 | 166 | 6.15e-29 | 107 |
Msa1418500 | AT5G45130.1 | 36.782 | 174 | 94 | 4 | 10 | 183 | 12 | 169 | 8.87e-29 | 107 |
Msa1418500 | AT5G47520.1 | 35.227 | 176 | 98 | 4 | 8 | 183 | 14 | 173 | 1.56e-28 | 107 |
Msa1418500 | AT4G19640.1 | 36.207 | 174 | 95 | 4 | 10 | 183 | 12 | 169 | 2.08e-28 | 106 |
Msa1418500 | AT5G64990.1 | 36.957 | 184 | 92 | 5 | 10 | 189 | 9 | 172 | 2.10e-28 | 106 |
Msa1418500 | AT5G45130.2 | 36.628 | 172 | 93 | 4 | 12 | 183 | 22 | 177 | 6.98e-28 | 105 |
Msa1418500 | AT5G64990.2 | 35.602 | 191 | 92 | 6 | 10 | 189 | 9 | 179 | 9.97e-26 | 99.8 |
Msa1418500 | AT1G43890.3 | 37.791 | 172 | 90 | 6 | 8 | 178 | 13 | 168 | 1.66e-25 | 99.4 |
Msa1418500 | AT1G43890.1 | 37.791 | 172 | 90 | 6 | 8 | 178 | 13 | 168 | 1.66e-25 | 99.4 |
Msa1418500 | AT1G43890.2 | 37.791 | 172 | 90 | 6 | 8 | 178 | 13 | 168 | 1.66e-25 | 99.4 |
Msa1418500 | AT3G54840.2 | 34.682 | 173 | 96 | 5 | 9 | 180 | 34 | 190 | 6.58e-25 | 97.1 |
Msa1418500 | AT3G54840.1 | 34.091 | 176 | 99 | 5 | 9 | 183 | 34 | 193 | 1.47e-24 | 96.3 |
Msa1418500 | AT5G03520.2 | 39.695 | 131 | 73 | 2 | 53 | 183 | 41 | 165 | 2.57e-24 | 95.9 |
Msa1418500 | AT4G19640.2 | 36.301 | 146 | 79 | 3 | 10 | 155 | 12 | 143 | 2.63e-24 | 94.4 |
Msa1418500 | AT5G03530.2 | 33.491 | 212 | 118 | 7 | 9 | 214 | 14 | 208 | 2.78e-24 | 95.9 |
Msa1418500 | AT5G03530.1 | 33.491 | 212 | 118 | 7 | 9 | 214 | 14 | 208 | 2.78e-24 | 95.9 |
Msa1418500 | AT3G54840.3 | 33.908 | 174 | 98 | 5 | 11 | 183 | 2 | 159 | 3.78e-24 | 94.4 |
Msa1418500 | AT4G19640.3 | 37.984 | 129 | 67 | 2 | 10 | 138 | 12 | 127 | 1.90e-23 | 93.2 |
Msa1418500 | AT5G20010.1 | 26.531 | 196 | 122 | 5 | 9 | 204 | 14 | 187 | 2.65e-22 | 90.9 |
Msa1418500 | AT4G35860.2 | 36.154 | 130 | 76 | 3 | 59 | 188 | 2 | 124 | 4.09e-22 | 89.0 |
Msa1418500 | AT5G20020.1 | 26.531 | 196 | 122 | 5 | 9 | 204 | 14 | 187 | 4.21e-22 | 90.5 |
Msa1418500 | AT5G55190.1 | 26.000 | 200 | 126 | 5 | 9 | 208 | 14 | 191 | 2.32e-21 | 88.6 |
Msa1418500 | AT4G28950.1 | 30.412 | 194 | 113 | 7 | 8 | 194 | 6 | 184 | 8.13e-20 | 84.0 |
Msa1418500 | AT5G55080.1 | 25.258 | 194 | 123 | 5 | 9 | 202 | 14 | 185 | 2.51e-19 | 83.2 |
Msa1418500 | AT5G59150.2 | 34.146 | 123 | 74 | 3 | 59 | 181 | 3 | 118 | 5.64e-19 | 80.9 |
Msa1418500 | AT3G09910.3 | 33.714 | 175 | 91 | 6 | 9 | 178 | 14 | 168 | 2.42e-18 | 80.1 |
Msa1418500 | AT3G09910.1 | 33.714 | 175 | 91 | 6 | 9 | 178 | 14 | 168 | 2.42e-18 | 80.1 |
Msa1418500 | AT3G09910.2 | 33.714 | 175 | 91 | 6 | 9 | 178 | 14 | 168 | 2.42e-18 | 80.1 |
Msa1418500 | AT3G09910.5 | 33.333 | 171 | 97 | 5 | 9 | 178 | 14 | 168 | 4.81e-18 | 79.0 |
Msa1418500 | AT3G09910.4 | 33.333 | 171 | 97 | 5 | 9 | 178 | 14 | 168 | 4.81e-18 | 79.0 |
Msa1418500 | AT5G45970.1 | 28.723 | 188 | 110 | 6 | 8 | 186 | 6 | 178 | 3.46e-16 | 74.3 |
Msa1418500 | AT1G20090.1 | 29.255 | 188 | 109 | 6 | 8 | 186 | 5 | 177 | 8.35e-16 | 73.2 |
Msa1418500 | AT1G75840.1 | 29.744 | 195 | 111 | 7 | 1 | 186 | 1 | 178 | 1.25e-15 | 72.8 |
Msa1418500 | AT4G35020.1 | 30.769 | 195 | 109 | 8 | 1 | 186 | 1 | 178 | 2.19e-15 | 72.0 |
Msa1418500 | AT4G35020.2 | 30.769 | 195 | 109 | 8 | 1 | 186 | 1 | 178 | 2.19e-15 | 72.0 |
Msa1418500 | AT4G35020.3 | 30.769 | 195 | 109 | 8 | 1 | 186 | 1 | 178 | 2.19e-15 | 72.0 |
Msa1418500 | AT3G51300.1 | 29.947 | 187 | 105 | 7 | 1 | 178 | 1 | 170 | 4.19e-15 | 71.2 |
Msa1418500 | AT2G44690.1 | 30.000 | 180 | 102 | 7 | 8 | 178 | 18 | 182 | 1.27e-14 | 70.1 |
Msa1418500 | AT2G17800.2 | 29.412 | 187 | 106 | 7 | 1 | 178 | 1 | 170 | 2.28e-14 | 69.3 |
Msa1418500 | AT2G17800.1 | 29.412 | 187 | 106 | 7 | 1 | 178 | 1 | 170 | 2.28e-14 | 69.3 |
Msa1418500 | AT4G35950.1 | 29.412 | 187 | 106 | 7 | 1 | 178 | 1 | 170 | 3.07e-14 | 68.9 |
Msa1418500 | AT3G48040.1 | 28.877 | 187 | 109 | 6 | 1 | 178 | 1 | 172 | 3.80e-14 | 68.9 |
Msa1418500 | AT5G62880.1 | 28.342 | 187 | 110 | 6 | 1 | 178 | 1 | 172 | 7.49e-14 | 68.2 |
Msa1418500 | AT5G62880.2 | 28.042 | 189 | 112 | 6 | 1 | 180 | 1 | 174 | 2.10e-13 | 66.6 |
Msa1418500 | AT3G48040.2 | 27.604 | 192 | 113 | 7 | 1 | 183 | 1 | 175 | 5.64e-12 | 62.4 |
Msa1418500 | AT4G35020.4 | 32.117 | 137 | 75 | 6 | 1 | 136 | 1 | 120 | 1.63e-11 | 60.5 |
Msa1418500 | AT4G35020.5 | 32.117 | 137 | 75 | 6 | 1 | 136 | 1 | 120 | 1.63e-11 | 60.5 |
Msa1418500 | AT5G64813.1 | 27.179 | 195 | 104 | 8 | 9 | 178 | 23 | 204 | 1.98e-11 | 62.8 |
Msa1418500 | AT5G64813.3 | 27.179 | 195 | 104 | 8 | 9 | 178 | 23 | 204 | 1.98e-11 | 62.8 |
Msa1418500 | AT5G64813.2 | 27.179 | 195 | 104 | 8 | 9 | 178 | 23 | 204 | 1.98e-11 | 62.8 |
Find 83 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTTTCCAAGCAATATAAA+TGG | 0.260081 | tig0024604:-32585 | None:intergenic |
AAACAATAGTACTATCAAAA+AGG | 0.261754 | tig0024604:-35428 | None:intergenic |
AATGGAAATGCCCTTGTATC+AGG | 0.343477 | tig0024604:-32567 | None:intergenic |
GGTGGATGTGCATGCTGATA+TGG | 0.355032 | tig0024604:+35279 | Msa1418500:exon |
CTCGAACTACCTATGTATAA+TGG | 0.355553 | tig0024604:-30673 | None:intergenic |
CAAGTTTAGTCAGCAGTATA+AGG | 0.371559 | tig0024604:+31480 | Msa1418500:CDS |
GCATTTCCATTTATATTGCT+TGG | 0.372285 | tig0024604:+32579 | Msa1418500:CDS |
TGATTTACCACGAATTAGAT+AGG | 0.376006 | tig0024604:+35502 | Msa1418500:three_prime_UTR |
CGTTTGATTCACTTGACAAC+TGG | 0.386540 | tig0024604:+31782 | Msa1418500:CDS |
TGCGTGAAATTGAGCTTAAT+TGG | 0.388931 | tig0024604:-30867 | None:intergenic |
CCACCACTTTGCTCACTCTC+TGG | 0.394400 | tig0024604:-35255 | None:intergenic |
AAAAGTGAGTAGTTTATATA+TGG | 0.396519 | tig0024604:-30543 | None:intergenic |
GGAAACAAGATTGATATTGA+TGG | 0.401120 | tig0024604:+32600 | Msa1418500:CDS |
CCTGTTCACGCTCATTGGCC+AGG | 0.406113 | tig0024604:-32830 | None:intergenic |
CTTTGAGACATCTGCAAAAG+AGG | 0.406390 | tig0024604:+32764 | Msa1418500:CDS |
CTTGAGAATGTTGCACTCCT+AGG | 0.412075 | tig0024604:+35464 | Msa1418500:three_prime_UTR |
TTGCTCAAGGTCATTGTTCT+CGG | 0.416277 | tig0024604:+30929 | Msa1418500:CDS |
CATGTCCTGTTCACGCTCAT+TGG | 0.416752 | tig0024604:-32835 | None:intergenic |
CTCAAAAGGGGAAAAGGAAA+AGG | 0.427399 | tig0024604:-30751 | None:intergenic |
TCACTCTCTGGAACCGCCTC+AGG | 0.429595 | tig0024604:-35243 | None:intergenic |
AAGGACTGGTGTGCTTCAAA+AGG | 0.438389 | tig0024604:+32729 | Msa1418500:CDS |
ATGATGATTCTGTATTGTAT+TGG | 0.441236 | tig0024604:-30792 | None:intergenic |
CCTGGCCAATGAGCGTGAAC+AGG | 0.444323 | tig0024604:+32830 | Msa1418500:CDS |
TCATTGTTCTCGGCGATAGC+GGG | 0.448213 | tig0024604:+30939 | Msa1418500:CDS |
TTATGAATGAAAACGATTGA+AGG | 0.448624 | tig0024604:+30710 | Msa1418500:five_prime_UTR |
ATGTCAACTTCGAACTCAAA+AGG | 0.448824 | tig0024604:-30765 | None:intergenic |
TGGAAGTACTGAATAATTGC+AGG | 0.450628 | tig0024604:+35299 | Msa1418500:three_prime_UTR |
TTCGAACTCAAAAGGGGAAA+AGG | 0.453130 | tig0024604:-30757 | None:intergenic |
AAAACGCAACTCCAAGACTT+TGG | 0.454601 | tig0024604:-31708 | None:intergenic |
TCTAATTCGTGGTAAATCAA+TGG | 0.457966 | tig0024604:-35498 | None:intergenic |
TGCTGAGTACATCATTCAAA+TGG | 0.459338 | tig0024604:-35587 | None:intergenic |
GCACGAGGAGTTTCTCAAAC+AGG | 0.463788 | tig0024604:+31804 | Msa1418500:CDS |
TGTCATTTCTTTGTTTATGT+CGG | 0.468037 | tig0024604:+30646 | Msa1418500:five_prime_UTR |
CAGCAGTATAAGGCAACAAT+TGG | 0.468961 | tig0024604:+31490 | Msa1418500:CDS |
CGCAATGACATAGCTGGTTA+CGG | 0.471076 | tig0024604:-30896 | None:intergenic |
TGTCAACTTCGAACTCAAAA+GGG | 0.471997 | tig0024604:-30764 | None:intergenic |
AGTGAGCAAAGTGGTGGTGG+TGG | 0.473564 | tig0024604:+35261 | Msa1418500:CDS |
CAAGAGAGATTCCAAAGTCT+TGG | 0.473805 | tig0024604:+31697 | Msa1418500:CDS |
GAATCAGTATCCTCGTTCCT+TGG | 0.478104 | tig0024604:+31085 | Msa1418500:CDS |
AATTTGAAACACAGCATTGA+AGG | 0.485101 | tig0024604:-35327 | None:intergenic |
CAGTGCTTCACATAGTTGAA+TGG | 0.491680 | tig0024604:+35624 | Msa1418500:three_prime_UTR |
AGGCAAACCCTCCTGATACA+AGG | 0.497414 | tig0024604:+32556 | Msa1418500:intron |
CTGTTCACGCTCATTGGCCA+GGG | 0.503718 | tig0024604:-32829 | None:intergenic |
CTTCAAGCCTATCTAATTCG+TGG | 0.509000 | tig0024604:-35509 | None:intergenic |
TTTGCAGATGTCTCAAAGTA+GGG | 0.510999 | tig0024604:-32759 | None:intergenic |
ACAATTTACCCACACAATCA+TGG | 0.519807 | tig0024604:-35391 | None:intergenic |
CACTGTATGCCATGATTGTG+TGG | 0.520653 | tig0024604:+35382 | Msa1418500:three_prime_UTR |
GTCATTGTTCTCGGCGATAG+CGG | 0.540348 | tig0024604:+30938 | Msa1418500:CDS |
AGGACTGGTGTGCTTCAAAA+GGG | 0.543802 | tig0024604:+32730 | Msa1418500:CDS |
TTGAGAATGTTGCACTCCTA+GGG | 0.559466 | tig0024604:+35465 | Msa1418500:three_prime_UTR |
CGTCTGCGCAATGACATAGC+TGG | 0.563049 | tig0024604:-30902 | None:intergenic |
ATTTGAAACACAGCATTGAA+GGG | 0.563465 | tig0024604:-35326 | None:intergenic |
ATGAATTGTTTAGCGTTGAG+AGG | 0.565012 | tig0024604:-30841 | None:intergenic |
CTGAGAAGAAAGCAAAGGAC+TGG | 0.565046 | tig0024604:+32715 | Msa1418500:CDS |
ATGACATAGCTGGTTACGGT+GGG | 0.565949 | tig0024604:-30892 | None:intergenic |
TGGTAGATATGGGACACTGC+TGG | 0.568483 | tig0024604:+31673 | Msa1418500:intron |
GGCAAACCCTCCTGATACAA+GGG | 0.575107 | tig0024604:+32557 | Msa1418500:intron |
ACAAGATTGATATTGATGGC+GGG | 0.576782 | tig0024604:+32604 | Msa1418500:CDS |
GTGTATTGCAAAGACTGCCC+TGG | 0.577400 | tig0024604:+32812 | Msa1418500:CDS |
GAGAGTGAGCAAAGTGGTGG+TGG | 0.590052 | tig0024604:+35258 | Msa1418500:CDS |
TCAAAAGGGGAAAAGGAAAA+GGG | 0.595793 | tig0024604:-30750 | None:intergenic |
GTCGGTAATCCATTATACAT+AGG | 0.607162 | tig0024604:+30664 | Msa1418500:five_prime_UTR |
AACAAGATTGATATTGATGG+CGG | 0.609685 | tig0024604:+32603 | Msa1418500:CDS |
TTGGTGTTCAAATTGAGATG+TGG | 0.611490 | tig0024604:+35547 | Msa1418500:three_prime_UTR |
GAGAACAATGACCTTGAGCA+AGG | 0.617108 | tig0024604:-30927 | None:intergenic |
GGAAATGCCCTTGTATCAGG+AGG | 0.623997 | tig0024604:-32564 | None:intergenic |
AACAAACGGGTAAGAAACCA+AGG | 0.625931 | tig0024604:-31102 | None:intergenic |
ACGAGGATACTGATTCATCA+AGG | 0.628381 | tig0024604:-31078 | None:intergenic |
GCGCAGACGAACCTTGCTCA+AGG | 0.628869 | tig0024604:+30916 | Msa1418500:CDS |
GTCAACTTCGAACTCAAAAG+GGG | 0.633038 | tig0024604:-30763 | None:intergenic |
TTCACTTGACAACTGGCACG+AGG | 0.633292 | tig0024604:+31789 | Msa1418500:CDS |
GAAATGCCCTTGTATCAGGA+GGG | 0.644750 | tig0024604:-32563 | None:intergenic |
CGTATGATGTGAACGTCATG+AGG | 0.648807 | tig0024604:+31758 | Msa1418500:CDS |
TGATTATTTATAGCTAAACA+AGG | 0.651063 | tig0024604:-30600 | None:intergenic |
CCAGAGAGTGAGCAAAGTGG+TGG | 0.665389 | tig0024604:+35255 | Msa1418500:CDS |
GGTTTCTGAGAAGAAAGCAA+AGG | 0.667441 | tig0024604:+32710 | Msa1418500:intron |
ACTGTATGCCATGATTGTGT+GGG | 0.672430 | tig0024604:+35383 | Msa1418500:three_prime_UTR |
TGACATAGCTGGTTACGGTG+GGG | 0.672648 | tig0024604:-30891 | None:intergenic |
AATGACATAGCTGGTTACGG+TGG | 0.700311 | tig0024604:-30893 | None:intergenic |
GGGTAAGAAACCAAGGAACG+AGG | 0.704314 | tig0024604:-31095 | None:intergenic |
TGATGGCGGGAATAGTCGAG+TGG | 0.710562 | tig0024604:+32617 | Msa1418500:CDS |
GTTCCAGAGAGTGAGCAAAG+TGG | 0.720662 | tig0024604:+35252 | Msa1418500:CDS |
AGGATACTGATTCATCAAGG+AGG | 0.733636 | tig0024604:-31075 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACTAATTATAATGTTTTTAT+TGG | + | tig0024604:32952-32971 | Msa1418500:intron | 10.0% |
!! | ACAAATATTTAACAAATTAA+AGG | - | tig0024604:33001-33020 | None:intergenic | 10.0% |
!!! | TGAATATAATTTTAAGAAAA+TGG | - | tig0024604:33270-33289 | None:intergenic | 10.0% |
!! | AAATAAAAACTTTATGAGAT+GGG | - | tig0024604:31181-31200 | None:intergenic | 15.0% |
!! | AAAATAAAAACTTTATGAGA+TGG | - | tig0024604:31182-31201 | None:intergenic | 15.0% |
!!! | AAAGTTTTGACTTTATTTTT+TGG | + | tig0024604:31338-31357 | Msa1418500:intron | 15.0% |
!!! | AAGTTTTGACTTTATTTTTT+GGG | + | tig0024604:31339-31358 | Msa1418500:intron | 15.0% |
!! | TTATAGATATTATTTCCTTA+TGG | + | tig0024604:31410-31429 | Msa1418500:intron | 15.0% |
!! | TATAGATATTATTTCCTTAT+GGG | + | tig0024604:31411-31430 | Msa1418500:intron | 15.0% |
!!! | AAAATTTTGTTTATTTGAGT+GGG | + | tig0024604:31635-31654 | Msa1418500:intron | 15.0% |
!!! | TCTTGATATTTTATAGTTTA+TGG | + | tig0024604:31916-31935 | Msa1418500:intron | 15.0% |
!!! | AATAAATACATGCTTTTTTT+AGG | + | tig0024604:32060-32079 | Msa1418500:intron | 15.0% |
!! | AGGATTGTTTATATAATAAT+AGG | + | tig0024604:32080-32099 | Msa1418500:intron | 15.0% |
!!! | TATTTTTTTTAGAAACAAAC+AGG | - | tig0024604:32341-32360 | None:intergenic | 15.0% |
!!! | TTTGTTTCTAAAAAAAATAC+TGG | + | tig0024604:32342-32361 | Msa1418500:intron | 15.0% |
!! | ATAAGATAATTAGACATTTA+TGG | - | tig0024604:32685-32704 | None:intergenic | 15.0% |
!!! | ATTAGTTTGTTATTATTCTT+TGG | + | tig0024604:33058-33077 | Msa1418500:intron | 15.0% |
!!! | GAAATATTTTTTGTCAATAT+AGG | - | tig0024604:33321-33340 | None:intergenic | 15.0% |
!! | TCAAAGAAATCTTTATATTT+GGG | - | tig0024604:33475-33494 | None:intergenic | 15.0% |
!! | ATCAAAGAAATCTTTATATT+TGG | - | tig0024604:33476-33495 | None:intergenic | 15.0% |
!! | TATTAACAAAATACTAAGTT+AGG | + | tig0024604:34415-34434 | Msa1418500:intron | 15.0% |
!! | TTTAAAAATTCCTATTTGAA+AGG | + | tig0024604:34886-34905 | Msa1418500:intron | 15.0% |
!! | TGATTATTTATAGCTAAACA+AGG | - | tig0024604:30603-30622 | None:intergenic | 20.0% |
!! | CAATGAAAATGAAAGAAAAT+GGG | - | tig0024604:31040-31059 | None:intergenic | 20.0% |
!! | TTAAGTGTGAAATTAACAAA+CGG | - | tig0024604:31119-31138 | None:intergenic | 20.0% |
!!! | GTTTTTATTTTTAACTCATC+TGG | + | tig0024604:31191-31210 | Msa1418500:intron | 20.0% |
!!! | TAAGTGATAATTAGTTTGTT+TGG | + | tig0024604:31267-31286 | Msa1418500:intron | 20.0% |
!!! | AACTTCTGTTGTTTTTATTA+TGG | + | tig0024604:31303-31322 | Msa1418500:intron | 20.0% |
!! | ATAGATATTATTTCCTTATG+GGG | + | tig0024604:31412-31431 | Msa1418500:intron | 20.0% |
!! | CACATATCTAATTTAGTTAA+GGG | - | tig0024604:31455-31474 | None:intergenic | 20.0% |
!!! | GAAAATTTTGTTTATTTGAG+TGG | + | tig0024604:31634-31653 | Msa1418500:intron | 20.0% |
!! | TCAAGAAAAAAATTAATAGC+AGG | - | tig0024604:31902-31921 | None:intergenic | 20.0% |
!!! | ACATTCATTTTAATGTCTAT+TGG | - | tig0024604:31989-32008 | None:intergenic | 20.0% |
!!! | AGTGTTCTATCTTTTAAATT+GGG | + | tig0024604:32308-32327 | Msa1418500:intron | 20.0% |
!! | GTTATAAAAAGATGAAAGAA+TGG | - | tig0024604:32390-32409 | None:intergenic | 20.0% |
!! | ACATTTATGGACATAAATTA+AGG | - | tig0024604:32672-32691 | None:intergenic | 20.0% |
!!! | TTATTCTTTGGAAAATATCA+AGG | + | tig0024604:33070-33089 | Msa1418500:intron | 20.0% |
!!! | CTCTTACTTTTTATGAAATA+AGG | - | tig0024604:33236-33255 | None:intergenic | 20.0% |
!! | TATTTCATAAAAAGTAAGAG+CGG | + | tig0024604:33236-33255 | Msa1418500:intron | 20.0% |
!! | ATATATTAAAACAACGATGA+TGG | - | tig0024604:33446-33465 | None:intergenic | 20.0% |
!!! | TCATCGTTGTTTTAATATAT+TGG | + | tig0024604:33446-33465 | Msa1418500:intron | 20.0% |
!! | AAAGAAATCTTTATATTTGG+GGG | - | tig0024604:33473-33492 | None:intergenic | 20.0% |
!! | CAAAGAAATCTTTATATTTG+GGG | - | tig0024604:33474-33493 | None:intergenic | 20.0% |
!!! | TTATGATACTACTAATTTTG+AGG | - | tig0024604:33942-33961 | None:intergenic | 20.0% |
!!! | ACTTAGTATTTTGTTAATAG+AGG | - | tig0024604:34414-34433 | None:intergenic | 20.0% |
!! | ATGAAAAAGATAAGAGTTAT+TGG | + | tig0024604:34695-34714 | Msa1418500:intron | 20.0% |
!!! | TAGGAATTTTTAAAGATGAT+TGG | - | tig0024604:34880-34899 | None:intergenic | 20.0% |
!!! | TAAAATTTTCTTCCTTTTCT+GGG | + | tig0024604:35095-35114 | Msa1418500:intron | 20.0% |
!! | ACTCAATTTGAAAATTTAGA+AGG | - | tig0024604:35146-35165 | None:intergenic | 20.0% |
!!! | CAAATTCTTCAAATTCTTTT+TGG | + | tig0024604:35344-35363 | Msa1418500:three_prime_UTR | 20.0% |
!! | AACAATAGTACTATCAAAAA+GGG | - | tig0024604:35430-35449 | None:intergenic | 20.0% |
!! | AAACAATAGTACTATCAAAA+AGG | - | tig0024604:35431-35450 | None:intergenic | 20.0% |
!!! | TTTTGATAGTACTATTGTTT+TGG | + | tig0024604:35431-35450 | Msa1418500:three_prime_UTR | 20.0% |
!!! | TTTGATAGTACTATTGTTTT+GGG | + | tig0024604:35432-35451 | Msa1418500:three_prime_UTR | 20.0% |
!! | TGTCATTTCTTTGTTTATGT+CGG | + | tig0024604:30646-30665 | Msa1418500:five_prime_UTR | 25.0% |
! | TTATGAATGAAAACGATTGA+AGG | + | tig0024604:30710-30729 | Msa1418500:five_prime_UTR | 25.0% |
! | ATGATGATTCTGTATTGTAT+TGG | - | tig0024604:30795-30814 | None:intergenic | 25.0% |
! | TTGAATGGAAGGAAAAAAAA+CGG | - | tig0024604:30997-31016 | None:intergenic | 25.0% |
! | ATTATTACGATTTGAATGGA+AGG | - | tig0024604:31008-31027 | None:intergenic | 25.0% |
! | TCGAATTATTACGATTTGAA+TGG | - | tig0024604:31012-31031 | None:intergenic | 25.0% |
! | GCAATGAAAATGAAAGAAAA+TGG | - | tig0024604:31041-31060 | None:intergenic | 25.0% |
! | TAAGTGTGAAATTAACAAAC+GGG | - | tig0024604:31118-31137 | None:intergenic | 25.0% |
! | ATTTCACACTTAATTGTTCA+CGG | + | tig0024604:31126-31145 | Msa1418500:intron | 25.0% |
! | GCACATATCTAATTTAGTTA+AGG | - | tig0024604:31456-31475 | None:intergenic | 25.0% |
!!! | CAACAAAAGTGTTGTTTATA+AGG | - | tig0024604:31843-31862 | None:intergenic | 25.0% |
! | CATAATGATCAAATTAAGTG+TGG | - | tig0024604:31966-31985 | None:intergenic | 25.0% |
! | TAATAGGTTTATGTTAGTTG+AGG | + | tig0024604:32096-32115 | Msa1418500:intron | 25.0% |
! | AATAGGTTTATGTTAGTTGA+GGG | + | tig0024604:32097-32116 | Msa1418500:intron | 25.0% |
! | ATGTAACCTATAAATTAGTC+AGG | + | tig0024604:32205-32224 | Msa1418500:intron | 25.0% |
!! | TAATCAACGGATAAAGTTTT+GGG | + | tig0024604:32245-32264 | Msa1418500:intron | 25.0% |
!! | CAGTGTTCTATCTTTTAAAT+TGG | + | tig0024604:32307-32326 | Msa1418500:intron | 25.0% |
!! | GTGTTCTATCTTTTAAATTG+GGG | + | tig0024604:32309-32328 | Msa1418500:intron | 25.0% |
! | AAGAATGGAAGTCAAATATA+AGG | - | tig0024604:32375-32394 | None:intergenic | 25.0% |
! | TTGTTTCCAAGCAATATAAA+TGG | - | tig0024604:32588-32607 | None:intergenic | 25.0% |
! | GAATTGTATTAACCATTGTA+TGG | + | tig0024604:32974-32993 | Msa1418500:intron | 25.0% |
!! | TTTTTCTCTGAATTTACAAC+AGG | - | tig0024604:33029-33048 | None:intergenic | 25.0% |
!!! | ATTTTTTGTCAATATAGGTG+TGG | - | tig0024604:33316-33335 | None:intergenic | 25.0% |
! | CTAAAAGAGGATAAATTAGA+TGG | - | tig0024604:33343-33362 | None:intergenic | 25.0% |
!! | TCTTGTGAATATTCTAAAAG+AGG | - | tig0024604:33356-33375 | None:intergenic | 25.0% |
! | GAATCAAATTATCTTCTAGA+AGG | - | tig0024604:33870-33889 | None:intergenic | 25.0% |
! | AGATAATTTGATTCAGATGA+TGG | + | tig0024604:33876-33895 | Msa1418500:intron | 25.0% |
! | TTATCTGTTAGAAAGAAGAA+TGG | + | tig0024604:34300-34319 | Msa1418500:intron | 25.0% |
! | TTTCATGCATCATATCTAAA+TGG | - | tig0024604:34351-34370 | None:intergenic | 25.0% |
!!! | ATTTCTTTTTCAGTTGCTAA+GGG | - | tig0024604:34505-34524 | None:intergenic | 25.0% |
!!! | AATTTCTTTTTCAGTTGCTA+AGG | - | tig0024604:34506-34525 | None:intergenic | 25.0% |
!!! | ATAAGAGTTATTGGTTCAAA+AGG | + | tig0024604:34704-34723 | Msa1418500:intron | 25.0% |
! | ATTGAAAGATCAATGTCTTT+CGG | - | tig0024604:34793-34812 | None:intergenic | 25.0% |
! | TGAGTTAAATGCATCAAAAT+TGG | - | tig0024604:34823-34842 | None:intergenic | 25.0% |
! | ATTCCTATTACAAACATCAA+TGG | + | tig0024604:34944-34963 | Msa1418500:intron | 25.0% |
! | CTAAATAAGATAGGTTTAGA+AGG | + | tig0024604:35020-35039 | Msa1418500:intron | 25.0% |
!! | CTAAAATTTTCTTCCTTTTC+TGG | + | tig0024604:35094-35113 | Msa1418500:intron | 25.0% |
!! | AAAATTTTCTTCCTTTTCTG+GGG | + | tig0024604:35096-35115 | Msa1418500:intron | 25.0% |
!! | TTGAATTGCAGATATTTTCA+AGG | + | tig0024604:35216-35235 | Msa1418500:intron | 25.0% |
!! | TGAATTGCAGATATTTTCAA+GGG | + | tig0024604:35217-35236 | Msa1418500:intron | 25.0% |
!!! | GAAGTGATTTTTGTTTTCTT+TGG | + | tig0024604:35528-35547 | Msa1418500:three_prime_UTR | 25.0% |
! | TTTCTTTCATTTTCATTGCC+AGG | + | tig0024604:31042-31061 | Msa1418500:intron | 30.0% |
! | TTCTTTCATTTTCATTGCCA+GGG | + | tig0024604:31043-31062 | Msa1418500:intron | 30.0% |
TTTCACACTTAATTGTTCAC+GGG | + | tig0024604:31127-31146 | Msa1418500:intron | 30.0% | |
AACCTTAAAGAAGTCAAATC+AGG | - | tig0024604:31373-31392 | None:intergenic | 30.0% | |
!!! | GCTTTTGTTTTTTCTGTTCT+TGG | + | tig0024604:31603-31622 | Msa1418500:intron | 30.0% |
!! | TATGATATGGTTGGTAGATA+TGG | + | tig0024604:31662-31681 | Msa1418500:intron | 30.0% |
!! | ATGATATGGTTGGTAGATAT+GGG | + | tig0024604:31663-31682 | Msa1418500:intron | 30.0% |
! | AACACTTTTGTTGCATTTTG+TGG | + | tig0024604:31850-31869 | Msa1418500:intron | 30.0% |
! | TTTGTTGCATTTTGTGGTTT+AGG | + | tig0024604:31856-31875 | Msa1418500:intron | 30.0% |
TTATGGTTATGACGAGAAAA+AGG | + | tig0024604:31933-31952 | Msa1418500:intron | 30.0% | |
GACATTAAAATGAATGTAGC+TGG | + | tig0024604:31992-32011 | Msa1418500:intron | 30.0% | |
CTTACAAAAAGTCAGAATCT+TGG | + | tig0024604:32023-32042 | Msa1418500:intron | 30.0% | |
TCACAACCTGACTAATTTAT+AGG | - | tig0024604:32214-32233 | None:intergenic | 30.0% | |
! | ATAAATTAGTCAGGTTGTGA+AGG | + | tig0024604:32214-32233 | Msa1418500:intron | 30.0% |
! | CTAATCAACGGATAAAGTTT+TGG | + | tig0024604:32244-32263 | Msa1418500:intron | 30.0% |
GCATTTCCATTTATATTGCT+TGG | + | tig0024604:32579-32598 | Msa1418500:CDS | 30.0% | |
GGAAACAAGATTGATATTGA+TGG | + | tig0024604:32600-32619 | Msa1418500:CDS | 30.0% | |
AACAAGATTGATATTGATGG+CGG | + | tig0024604:32603-32622 | Msa1418500:CDS | 30.0% | |
ATTAAGGAAACTTAGAAGTG+AGG | - | tig0024604:32656-32675 | None:intergenic | 30.0% | |
TGTCTAATTATCTTATGTGC+AGG | + | tig0024604:32689-32708 | Msa1418500:intron | 30.0% | |
CAAATTAAAGGTCCATACAA+TGG | - | tig0024604:32989-33008 | None:intergenic | 30.0% | |
TACGATCTTGTAAATCTCTA+TGG | - | tig0024604:33208-33227 | None:intergenic | 30.0% | |
GATCATATCTCTAATTAACG+TGG | + | tig0024604:33493-33512 | Msa1418500:intron | 30.0% | |
!! | CTGGAATTCTAAGATAGTAT+TGG | - | tig0024604:33667-33686 | None:intergenic | 30.0% |
ACTATCTTAGAATTCCAGTT+AGG | + | tig0024604:33669-33688 | Msa1418500:intron | 30.0% | |
TTGATTGTAACAAAAGGCTT+GGG | - | tig0024604:33730-33749 | None:intergenic | 30.0% | |
TTTGATTGTAACAAAAGGCT+TGG | - | tig0024604:33731-33750 | None:intergenic | 30.0% | |
CGTAGTTTGATTGTAACAAA+AGG | - | tig0024604:33736-33755 | None:intergenic | 30.0% | |
AATCAAACTACGTAGTATGT+AGG | + | tig0024604:33744-33763 | Msa1418500:intron | 30.0% | |
! | AGTTTTCATTCCCATGAAAT+AGG | + | tig0024604:33909-33928 | Msa1418500:intron | 30.0% |
TCTTCATTATCCCTATGAAA+TGG | + | tig0024604:33968-33987 | Msa1418500:intron | 30.0% | |
CTTCATTATCCCTATGAAAT+GGG | + | tig0024604:33969-33988 | Msa1418500:intron | 30.0% | |
AATTGGGAGCAAAAGAAAAT+GGG | - | tig0024604:34045-34064 | None:intergenic | 30.0% | |
AAATTGGGAGCAAAAGAAAA+TGG | - | tig0024604:34046-34065 | None:intergenic | 30.0% | |
!! | GACCTATTGGTTCAAAAATT+GGG | - | tig0024604:34061-34080 | None:intergenic | 30.0% |
!! | AGACCTATTGGTTCAAAAAT+TGG | - | tig0024604:34062-34081 | None:intergenic | 30.0% |
!!! | TGTTTTAGCATGCCTATTAT+TGG | + | tig0024604:34438-34457 | Msa1418500:intron | 30.0% |
TTGCTTTCTGTTCCAATAAT+AGG | - | tig0024604:34453-34472 | None:intergenic | 30.0% | |
!!! | TTTCTTTTTCAGTTGCTAAG+GGG | - | tig0024604:34504-34523 | None:intergenic | 30.0% |
GTATCTGCATCTAAATAGAA+AGG | + | tig0024604:34908-34927 | Msa1418500:intron | 30.0% | |
CTAAATAGAAAGGAACTGTA+AGG | + | tig0024604:34918-34937 | Msa1418500:intron | 30.0% | |
TCACCATTGATGTTTGTAAT+AGG | - | tig0024604:34950-34969 | None:intergenic | 30.0% | |
ATTACAAACATCAATGGTGA+AGG | + | tig0024604:34950-34969 | Msa1418500:intron | 30.0% | |
GAGGAGATTCTAAATAAGAT+AGG | + | tig0024604:35011-35030 | Msa1418500:intron | 30.0% | |
! | AAATTTTCTTCCTTTTCTGG+GGG | + | tig0024604:35097-35116 | Msa1418500:intron | 30.0% |
! | ATTTGAAACACAGCATTGAA+GGG | - | tig0024604:35329-35348 | None:intergenic | 30.0% |
! | AATTTGAAACACAGCATTGA+AGG | - | tig0024604:35330-35349 | None:intergenic | 30.0% |
!!! | ATAGTACTATTGTTTTGGGA+AGG | + | tig0024604:35436-35455 | Msa1418500:three_prime_UTR | 30.0% |
TCTAATTCGTGGTAAATCAA+TGG | - | tig0024604:35501-35520 | None:intergenic | 30.0% | |
TGATTTACCACGAATTAGAT+AGG | + | tig0024604:35502-35521 | Msa1418500:three_prime_UTR | 30.0% | |
GTCGGTAATCCATTATACAT+AGG | + | tig0024604:30664-30683 | Msa1418500:five_prime_UTR | 35.0% | |
CTCGAACTACCTATGTATAA+TGG | - | tig0024604:30676-30695 | None:intergenic | 35.0% | |
TCAAAAGGGGAAAAGGAAAA+GGG | - | tig0024604:30753-30772 | None:intergenic | 35.0% | |
TGTCAACTTCGAACTCAAAA+GGG | - | tig0024604:30767-30786 | None:intergenic | 35.0% | |
ATGTCAACTTCGAACTCAAA+AGG | - | tig0024604:30768-30787 | None:intergenic | 35.0% | |
! | ATGAATTGTTTAGCGTTGAG+AGG | - | tig0024604:30844-30863 | None:intergenic | 35.0% |
TGCGTGAAATTGAGCTTAAT+TGG | - | tig0024604:30870-30889 | None:intergenic | 35.0% | |
! | CACCTGATTTGACTTCTTTA+AGG | + | tig0024604:31368-31387 | Msa1418500:intron | 35.0% |
!! | CTTCTTTAAGGTTGTGTTTG+AGG | + | tig0024604:31380-31399 | Msa1418500:intron | 35.0% |
TTTAGTTAAGGGTCCACAAA+AGG | - | tig0024604:31444-31463 | None:intergenic | 35.0% | |
CAAGTTTAGTCAGCAGTATA+AGG | + | tig0024604:31480-31499 | Msa1418500:CDS | 35.0% | |
! | TTGAGTGGGTTTGTATGATA+TGG | + | tig0024604:31649-31668 | Msa1418500:intron | 35.0% |
! | TTGGAGTTGCGTTTTATAGA+GGG | + | tig0024604:31716-31735 | Msa1418500:CDS | 35.0% |
ACAATCTGATCAGTAAGAGA+TGG | - | tig0024604:32427-32446 | None:intergenic | 35.0% | |
TTATGTTCTTCTTGTGACAC+AGG | + | tig0024604:32536-32555 | Msa1418500:intron | 35.0% | |
! | ACAAGATTGATATTGATGGC+GGG | + | tig0024604:32604-32623 | Msa1418500:CDS | 35.0% |
TTTGCAGATGTCTCAAAGTA+GGG | - | tig0024604:32762-32781 | None:intergenic | 35.0% | |
! | TTTTGCAGATGTCTCAAAGT+AGG | - | tig0024604:32763-32782 | None:intergenic | 35.0% |
ACTGATATGAATTGAAGCTG+TGG | + | tig0024604:32879-32898 | Msa1418500:intron | 35.0% | |
TCTCTGAATTTACAACAGGA+TGG | - | tig0024604:33025-33044 | None:intergenic | 35.0% | |
TAACTTGAATAGTGCTCCTT+AGG | + | tig0024604:33103-33122 | Msa1418500:intron | 35.0% | |
AACTTGAATAGTGCTCCTTA+GGG | + | tig0024604:33104-33123 | Msa1418500:intron | 35.0% | |
! | ATTGAGTGTTTTCAGCTTGT+GGG | - | tig0024604:33145-33164 | None:intergenic | 35.0% |
ATAGCAGAAACAATGTGCAA+TGG | - | tig0024604:33421-33440 | None:intergenic | 35.0% | |
!!! | ATCTAGTTTTCGACGTGAAA+GGG | - | tig0024604:33531-33550 | None:intergenic | 35.0% |
CTTATCCTAGATCTGTCATA+TGG | - | tig0024604:33642-33661 | None:intergenic | 35.0% | |
CAGTATCTATTGAAAGTCTG+CGG | + | tig0024604:33789-33808 | Msa1418500:intron | 35.0% | |
AAGTGCCTCAAAATTAATGC+TGG | + | tig0024604:33994-34013 | Msa1418500:intron | 35.0% | |
! | ACTCACCAGCATTAATTTTG+AGG | - | tig0024604:34002-34021 | None:intergenic | 35.0% |
! | CTCCCAATTTTTGAACCAAT+AGG | + | tig0024604:34056-34075 | Msa1418500:intron | 35.0% |
TTTGAGTAAGACAGACCTAT+TGG | - | tig0024604:34074-34093 | None:intergenic | 35.0% | |
AATAGGTCTGTCTTACTCAA+AGG | + | tig0024604:34073-34092 | Msa1418500:intron | 35.0% | |
ATAGGTCTGTCTTACTCAAA+GGG | + | tig0024604:34074-34093 | Msa1418500:intron | 35.0% | |
TATAATTTCATCCCAACTCC+AGG | - | tig0024604:34246-34265 | None:intergenic | 35.0% | |
GAGTTGGGATGAAATTATAC+AGG | + | tig0024604:34247-34266 | Msa1418500:intron | 35.0% | |
GAAGAATGGAAGTTAGTTCA+CGG | + | tig0024604:34314-34333 | Msa1418500:intron | 35.0% | |
AAGAATGGAAGTTAGTTCAC+GGG | + | tig0024604:34315-34334 | Msa1418500:intron | 35.0% | |
TCTACCTAATGAGTGATTGA+CGG | + | tig0024604:34525-34544 | Msa1418500:intron | 35.0% | |
! | TCAACTTGCTTTGTTGATGT+GGG | - | tig0024604:34595-34614 | None:intergenic | 35.0% |
! | TTCAACTTGCTTTGTTGATG+TGG | - | tig0024604:34596-34615 | None:intergenic | 35.0% |
! | TGCAATCCAACTTGTAGTTT+TGG | + | tig0024604:34619-34638 | Msa1418500:intron | 35.0% |
!!! | ATCCAACTTGTAGTTTTGGT+TGG | + | tig0024604:34623-34642 | Msa1418500:intron | 35.0% |
!!! | TCCAACTTGTAGTTTTGGTT+GGG | + | tig0024604:34624-34643 | Msa1418500:intron | 35.0% |
! | GGTTGGGTTAAACAAGTTTT+TGG | + | tig0024604:34640-34659 | Msa1418500:intron | 35.0% |
TTCATAGACTTCACTTGAGA+CGG | - | tig0024604:34680-34699 | None:intergenic | 35.0% | |
TTCAAAAGGTTAGAGTGCAT+GGG | + | tig0024604:34718-34737 | Msa1418500:intron | 35.0% | |
AAAAGTTGGCAAATGCCATA+TGG | + | tig0024604:34741-34760 | Msa1418500:intron | 35.0% | |
AAAGTTGGCAAATGCCATAT+GGG | + | tig0024604:34742-34761 | Msa1418500:intron | 35.0% | |
GATGCAGATACCTTTCAAAT+AGG | - | tig0024604:34899-34918 | None:intergenic | 35.0% | |
AATCTGTTCTTTCATGTTGC+TGG | - | tig0024604:34991-35010 | None:intergenic | 35.0% | |
CAACATGAAAGAACAGATTG+AGG | + | tig0024604:34992-35011 | Msa1418500:intron | 35.0% | |
! | AATTTTCTTCCTTTTCTGGG+GGG | + | tig0024604:35098-35117 | Msa1418500:intron | 35.0% |
GATGCATGTACTAAGATTTG+AGG | - | tig0024604:35124-35143 | None:intergenic | 35.0% | |
!! | ATATTTTCAAGGGATTCCTG+AGG | + | tig0024604:35227-35246 | Msa1418500:CDS | 35.0% |
!! | TGGAAGTACTGAATAATTGC+AGG | + | tig0024604:35299-35318 | Msa1418500:three_prime_UTR | 35.0% |
ACAATTTACCCACACAATCA+TGG | - | tig0024604:35394-35413 | None:intergenic | 35.0% | |
CTATCAAAAAGGGAACATCA+AGG | - | tig0024604:35420-35439 | None:intergenic | 35.0% | |
! | TTGGTGTTCAAATTGAGATG+TGG | + | tig0024604:35547-35566 | Msa1418500:three_prime_UTR | 35.0% |
TGCTGAGTACATCATTCAAA+TGG | - | tig0024604:35590-35609 | None:intergenic | 35.0% | |
CTCAAAAGGGGAAAAGGAAA+AGG | - | tig0024604:30754-30773 | None:intergenic | 40.0% | |
TTCGAACTCAAAAGGGGAAA+AGG | - | tig0024604:30760-30779 | None:intergenic | 40.0% | |
GTCAACTTCGAACTCAAAAG+GGG | - | tig0024604:30766-30785 | None:intergenic | 40.0% | |
TTGCTCAAGGTCATTGTTCT+CGG | + | tig0024604:30929-30948 | Msa1418500:CDS | 40.0% | |
!! | AAAAACGGTGTTGCAGAGAA+AGG | - | tig0024604:30982-31001 | None:intergenic | 40.0% |
! | TTCATTTTCATTGCCAGGGT+TGG | + | tig0024604:31047-31066 | Msa1418500:intron | 40.0% |
!! | AGGATACTGATTCATCAAGG+AGG | - | tig0024604:31078-31097 | None:intergenic | 40.0% |
!! | ACGAGGATACTGATTCATCA+AGG | - | tig0024604:31081-31100 | None:intergenic | 40.0% |
AACAAACGGGTAAGAAACCA+AGG | - | tig0024604:31105-31124 | None:intergenic | 40.0% | |
! | TGAGATGGGTTTCAAAGAAG+TGG | - | tig0024604:31167-31186 | None:intergenic | 40.0% |
CAAAAGGCTAAATCCCCATA+AGG | - | tig0024604:31428-31447 | None:intergenic | 40.0% | |
!! | TATGGGGATTTAGCCTTTTG+TGG | + | tig0024604:31428-31447 | Msa1418500:intron | 40.0% |
CAGCAGTATAAGGCAACAAT+TGG | + | tig0024604:31490-31509 | Msa1418500:CDS | 40.0% | |
GTGGGTTTGTATGATATGGT+TGG | + | tig0024604:31653-31672 | Msa1418500:intron | 40.0% | |
CAAGAGAGATTCCAAAGTCT+TGG | + | tig0024604:31697-31716 | Msa1418500:CDS | 40.0% | |
AAAACGCAACTCCAAGACTT+TGG | - | tig0024604:31711-31730 | None:intergenic | 40.0% | |
! | CTTGGAGTTGCGTTTTATAG+AGG | + | tig0024604:31715-31734 | Msa1418500:CDS | 40.0% |
! | TGGAGTTGCGTTTTATAGAG+GGG | + | tig0024604:31717-31736 | Msa1418500:CDS | 40.0% |
CGTTTGATTCACTTGACAAC+TGG | + | tig0024604:31782-31801 | Msa1418500:CDS | 40.0% | |
ACTTGTAGTTGAGACTTGAG+AGG | + | tig0024604:32157-32176 | Msa1418500:intron | 40.0% | |
CTTGTAGTTGAGACTTGAGA+GGG | + | tig0024604:32158-32177 | Msa1418500:intron | 40.0% | |
AGGGACGCAATGTGATAATT+TGG | + | tig0024604:32177-32196 | Msa1418500:intron | 40.0% | |
! | AATTAGTCAGGTTGTGAAGG+AGG | + | tig0024604:32217-32236 | Msa1418500:intron | 40.0% |
! | ATTAGTCAGGTTGTGAAGGA+GGG | + | tig0024604:32218-32237 | Msa1418500:intron | 40.0% |
!! | GAAGGAGGGTATCTAATCAA+CGG | + | tig0024604:32232-32251 | Msa1418500:intron | 40.0% |
TACATCTGCCAATGCACAAA+TGG | - | tig0024604:32271-32290 | None:intergenic | 40.0% | |
AGAACACTGCTGATGTTTGA+GGG | - | tig0024604:32296-32315 | None:intergenic | 40.0% | |
TAGAACACTGCTGATGTTTG+AGG | - | tig0024604:32297-32316 | None:intergenic | 40.0% | |
! | AGAGATGGAGCATTATCACA+AGG | - | tig0024604:32412-32431 | None:intergenic | 40.0% |
!! | TGATTAGCCTTCCAACTTAC+TGG | + | tig0024604:32488-32507 | Msa1418500:intron | 40.0% |
AATGGAAATGCCCTTGTATC+AGG | - | tig0024604:32570-32589 | None:intergenic | 40.0% | |
! | GGTTTCTGAGAAGAAAGCAA+AGG | + | tig0024604:32710-32729 | Msa1418500:intron | 40.0% |
!! | CTTTGAGACATCTGCAAAAG+AGG | + | tig0024604:32764-32783 | Msa1418500:CDS | 40.0% |
! | CATTGAGTGTTTTCAGCTTG+TGG | - | tig0024604:33146-33165 | None:intergenic | 40.0% |
AGTGAACATATCAGTGACTG+AGG | - | tig0024604:33185-33204 | None:intergenic | 40.0% | |
!!! | GATCTAGTTTTCGACGTGAA+AGG | - | tig0024604:33532-33551 | None:intergenic | 40.0% |
!! | GACATGAGGGTGTTGTAATT+GGG | - | tig0024604:33581-33600 | None:intergenic | 40.0% |
!! | AGACATGAGGGTGTTGTAAT+TGG | - | tig0024604:33582-33601 | None:intergenic | 40.0% |
ATTACAACACCCTCATGTCT+AGG | + | tig0024604:33582-33601 | Msa1418500:intron | 40.0% | |
ATGTCTAGTCCTAGACATGA+GGG | - | tig0024604:33594-33613 | None:intergenic | 40.0% | |
TGTGACCATATGACAGATCT+AGG | + | tig0024604:33634-33653 | Msa1418500:intron | 40.0% | |
ACTACGTAGTATGTAGGAAG+AGG | + | tig0024604:33750-33769 | Msa1418500:intron | 40.0% | |
ATTGAAAGTCTGCGGTAATG+TGG | + | tig0024604:33797-33816 | Msa1418500:intron | 40.0% | |
TTGAAAGTCTGCGGTAATGT+GGG | + | tig0024604:33798-33817 | Msa1418500:intron | 40.0% | |
AGGCACTTGACCTATTTCAT+GGG | - | tig0024604:33922-33941 | None:intergenic | 40.0% | |
GGCACTTAACCCATTTCATA+GGG | - | tig0024604:33981-34000 | None:intergenic | 40.0% | |
AGGCACTTAACCCATTTCAT+AGG | - | tig0024604:33982-34001 | None:intergenic | 40.0% | |
GGGAAAATGTGACAAAAGCA+AGG | - | tig0024604:34025-34044 | None:intergenic | 40.0% | |
AAGACAATAGATGCTTAGCC+TGG | + | tig0024604:34225-34244 | Msa1418500:intron | 40.0% | |
TTGGAACAGAAAGCAAGCTT+TGG | + | tig0024604:34457-34476 | Msa1418500:intron | 40.0% | |
TGGAACAGAAAGCAAGCTTT+GGG | + | tig0024604:34458-34477 | Msa1418500:intron | 40.0% | |
TATAGCATGCCTATTGTGGT+AGG | - | tig0024604:34555-34574 | None:intergenic | 40.0% | |
CTAGTATAGCATGCCTATTG+TGG | - | tig0024604:34559-34578 | None:intergenic | 40.0% | |
CACAATAGGCATGCTATACT+AGG | + | tig0024604:34557-34576 | Msa1418500:intron | 40.0% | |
ATAGGCATGCTATACTAGGA+TGG | + | tig0024604:34561-34580 | Msa1418500:intron | 40.0% | |
ACCCAACCAAAACTACAAGT+TGG | - | tig0024604:34628-34647 | None:intergenic | 40.0% | |
GTTCAAAAGGTTAGAGTGCA+TGG | + | tig0024604:34717-34736 | Msa1418500:intron | 40.0% | |
TTAGAGTGCATGGGAAAAGT+TGG | + | tig0024604:34727-34746 | Msa1418500:intron | 40.0% | |
AAGTTGGCAAATGCCATATG+GGG | + | tig0024604:34743-34762 | Msa1418500:intron | 40.0% | |
ACTGTATGCCATGATTGTGT+GGG | + | tig0024604:35383-35402 | Msa1418500:three_prime_UTR | 40.0% | |
TTGAGAATGTTGCACTCCTA+GGG | + | tig0024604:35465-35484 | Msa1418500:three_prime_UTR | 40.0% | |
! | CAATGGAACATGTTTTCCCT+AGG | - | tig0024604:35484-35503 | None:intergenic | 40.0% |
CTTCAAGCCTATCTAATTCG+TGG | - | tig0024604:35512-35531 | None:intergenic | 40.0% | |
CAGTGCTTCACATAGTTGAA+TGG | + | tig0024604:35624-35643 | Msa1418500:three_prime_UTR | 40.0% | |
ATGACATAGCTGGTTACGGT+GGG | - | tig0024604:30895-30914 | None:intergenic | 45.0% | |
AATGACATAGCTGGTTACGG+TGG | - | tig0024604:30896-30915 | None:intergenic | 45.0% | |
CGCAATGACATAGCTGGTTA+CGG | - | tig0024604:30899-30918 | None:intergenic | 45.0% | |
GAGAACAATGACCTTGAGCA+AGG | - | tig0024604:30930-30949 | None:intergenic | 45.0% | |
TGCAGAGAAAGGAGGGAAAA+AGG | - | tig0024604:30971-30990 | None:intergenic | 45.0% | |
GAATCAGTATCCTCGTTCCT+TGG | + | tig0024604:31085-31104 | Msa1418500:CDS | 45.0% | |
AGACTCGTCACACTACAAGT+GGG | + | tig0024604:31550-31569 | Msa1418500:intron | 45.0% | |
! | AGTTGCGTTTTATAGAGGGG+CGG | + | tig0024604:31720-31739 | Msa1418500:CDS | 45.0% |
CGTATGATGTGAACGTCATG+AGG | + | tig0024604:31758-31777 | Msa1418500:CDS | 45.0% | |
!! | GTTTTGGGCCATTTGTGCAT+TGG | + | tig0024604:32260-32279 | Msa1418500:intron | 45.0% |
! | GACAAGTCCAGTAAGTTGGA+AGG | - | tig0024604:32498-32517 | None:intergenic | 45.0% |
GTGAGACAAGTCCAGTAAGT+TGG | - | tig0024604:32502-32521 | None:intergenic | 45.0% | |
GAAATGCCCTTGTATCAGGA+GGG | - | tig0024604:32566-32585 | None:intergenic | 45.0% | |
CTGAGAAGAAAGCAAAGGAC+TGG | + | tig0024604:32715-32734 | Msa1418500:CDS | 45.0% | |
! | AAGGACTGGTGTGCTTCAAA+AGG | + | tig0024604:32729-32748 | Msa1418500:CDS | 45.0% |
! | AGGACTGGTGTGCTTCAAAA+GGG | + | tig0024604:32730-32749 | Msa1418500:CDS | 45.0% |
GATGTCTAGTCCTAGACATG+AGG | - | tig0024604:33595-33614 | None:intergenic | 45.0% | |
CGTAGTATGTAGGAAGAGGA+TGG | + | tig0024604:33754-33773 | Msa1418500:intron | 45.0% | |
! | GAGGCACTTGACCTATTTCA+TGG | - | tig0024604:33923-33942 | None:intergenic | 45.0% |
!!! | CACCAAACCTTTTGAAGCAG+CGG | + | tig0024604:34171-34190 | Msa1418500:intron | 45.0% |
ATCCGCTGCTTCAAAAGGTT+TGG | - | tig0024604:34176-34195 | None:intergenic | 45.0% | |
TGTGAATCCGCTGCTTCAAA+AGG | - | tig0024604:34181-34200 | None:intergenic | 45.0% | |
GCGGATTCACATGAAAATGC+TGG | + | tig0024604:34190-34209 | Msa1418500:intron | 45.0% | |
ATAGATGCTTAGCCTGGAGT+TGG | + | tig0024604:34231-34250 | Msa1418500:intron | 45.0% | |
TAGATGCTTAGCCTGGAGTT+GGG | + | tig0024604:34232-34251 | Msa1418500:intron | 45.0% | |
GGAACAGAAAGCAAGCTTTG+GGG | + | tig0024604:34459-34478 | Msa1418500:intron | 45.0% | |
! | GAACAGAAAGCAAGCTTTGG+GGG | + | tig0024604:34460-34479 | Msa1418500:intron | 45.0% |
!! | AACAGAAAGCAAGCTTTGGG+GGG | + | tig0024604:34461-34480 | Msa1418500:intron | 45.0% |
CAGTTGCTAAGGGGAAAGTA+AGG | - | tig0024604:34495-34514 | None:intergenic | 45.0% | |
TTGGCCGTCAATCACTCATT+AGG | - | tig0024604:34532-34551 | None:intergenic | 45.0% | |
CAAATGCCATATGGGGACTT+GGG | + | tig0024604:34750-34769 | Msa1418500:intron | 45.0% | |
AAATGCCATATGGGGACTTG+GGG | + | tig0024604:34751-34770 | Msa1418500:intron | 45.0% | |
GGTGAAGGAGTTCTCTAAAC+TGG | + | tig0024604:34965-34984 | Msa1418500:intron | 45.0% | |
!! | TTTTCAAGGGATTCCTGAGG+CGG | + | tig0024604:35230-35249 | Msa1418500:CDS | 45.0% |
CACTGTATGCCATGATTGTG+TGG | + | tig0024604:35382-35401 | Msa1418500:three_prime_UTR | 45.0% | |
CTTGAGAATGTTGCACTCCT+AGG | + | tig0024604:35464-35483 | Msa1418500:three_prime_UTR | 45.0% | |
TGACATAGCTGGTTACGGTG+GGG | - | tig0024604:30894-30913 | None:intergenic | 50.0% | |
GTCATTGTTCTCGGCGATAG+CGG | + | tig0024604:30938-30957 | Msa1418500:CDS | 50.0% | |
TCATTGTTCTCGGCGATAGC+GGG | + | tig0024604:30939-30958 | Msa1418500:CDS | 50.0% | |
!! | ACGGTGTTGCAGAGAAAGGA+GGG | - | tig0024604:30978-30997 | None:intergenic | 50.0% |
!! | AACGGTGTTGCAGAGAAAGG+AGG | - | tig0024604:30979-30998 | None:intergenic | 50.0% |
! | CAAGGAGGTTTTTCCAACCC+TGG | - | tig0024604:31063-31082 | None:intergenic | 50.0% |
GGGTAAGAAACCAAGGAACG+AGG | - | tig0024604:31098-31117 | None:intergenic | 50.0% | |
CAGACTCGTCACACTACAAG+TGG | + | tig0024604:31549-31568 | Msa1418500:intron | 50.0% | |
TGGTAGATATGGGACACTGC+TGG | + | tig0024604:31673-31692 | Msa1418500:intron | 50.0% | |
TTCACTTGACAACTGGCACG+AGG | + | tig0024604:31789-31808 | Msa1418500:CDS | 50.0% | |
GCACGAGGAGTTTCTCAAAC+AGG | + | tig0024604:31804-31823 | Msa1418500:CDS | 50.0% | |
AGGCAAACCCTCCTGATACA+AGG | + | tig0024604:32556-32575 | Msa1418500:intron | 50.0% | |
GGCAAACCCTCCTGATACAA+GGG | + | tig0024604:32557-32576 | Msa1418500:intron | 50.0% | |
GGAAATGCCCTTGTATCAGG+AGG | - | tig0024604:32567-32586 | None:intergenic | 50.0% | |
GTGTATTGCAAAGACTGCCC+TGG | + | tig0024604:32812-32831 | Msa1418500:CDS | 50.0% | |
CATGTCCTGTTCACGCTCAT+TGG | - | tig0024604:32838-32857 | None:intergenic | 50.0% | |
CTGAACAGGGATCTTCCCTA+AGG | - | tig0024604:33122-33141 | None:intergenic | 50.0% | |
! | TTCAGCTTGTGGGCTGAACA+GGG | - | tig0024604:33135-33154 | None:intergenic | 50.0% |
! | TTTCAGCTTGTGGGCTGAAC+AGG | - | tig0024604:33136-33155 | None:intergenic | 50.0% |
! | TCTAGAACGTGATCGAACGC+AGG | + | tig0024604:33552-33571 | Msa1418500:intron | 50.0% |
AGGACTAGACATCTCGAGTG+TGG | + | tig0024604:33602-33621 | Msa1418500:intron | 50.0% | |
TCAGCCTGTAGCTCAAGATG+CGG | + | tig0024604:33698-33717 | Msa1418500:intron | 50.0% | |
TCTACGTCAACCTAGCCCAA+AGG | + | tig0024604:34371-34390 | Msa1418500:intron | 50.0% | |
TCATCGACCAACCCTCCTTT+GGG | - | tig0024604:34389-34408 | None:intergenic | 50.0% | |
TTCATCGACCAACCCTCCTT+TGG | - | tig0024604:34390-34409 | None:intergenic | 50.0% | |
GCATGCCTATTGTGGTAGGT+TGG | - | tig0024604:34551-34570 | None:intergenic | 50.0% | |
GCAAATGCCATATGGGGACT+TGG | + | tig0024604:34749-34768 | Msa1418500:intron | 50.0% | |
GTTCCAGAGAGTGAGCAAAG+TGG | + | tig0024604:35252-35271 | Msa1418500:CDS | 50.0% | |
GGTGGATGTGCATGCTGATA+TGG | + | tig0024604:35279-35298 | Msa1418500:exon | 50.0% | |
CGTCTGCGCAATGACATAGC+TGG | - | tig0024604:30905-30924 | None:intergenic | 55.0% | |
!! | TGATGGCGGGAATAGTCGAG+TGG | + | tig0024604:32617-32636 | Msa1418500:CDS | 55.0% |
CTGTTCACGCTCATTGGCCA+GGG | - | tig0024604:32832-32851 | None:intergenic | 55.0% | |
CAGGCTGAGCAAGACCTAAC+TGG | - | tig0024604:33686-33705 | None:intergenic | 55.0% | |
CAGCCTGTAGCTCAAGATGC+GGG | + | tig0024604:33699-33718 | Msa1418500:intron | 55.0% | |
AGCCTGTAGCTCAAGATGCG+GGG | + | tig0024604:33700-33719 | Msa1418500:intron | 55.0% | |
ACGTCAACCTAGCCCAAAGG+AGG | + | tig0024604:34374-34393 | Msa1418500:intron | 55.0% | |
CGTCAACCTAGCCCAAAGGA+GGG | + | tig0024604:34375-34394 | Msa1418500:intron | 55.0% | |
AACCTAGCCCAAAGGAGGGT+TGG | + | tig0024604:34379-34398 | Msa1418500:intron | 55.0% | |
!! | GAAAGCAAGCTTTGGGGGGT+TGG | + | tig0024604:34465-34484 | Msa1418500:intron | 55.0% |
GACGGCCAACCTACCACAAT+AGG | + | tig0024604:34543-34562 | Msa1418500:intron | 55.0% | |
! | GATTTGAGGCCCCCCAGAAA+AGG | - | tig0024604:35110-35129 | None:intergenic | 55.0% |
CCACCACTTTGCTCACTCTC+TGG | - | tig0024604:35258-35277 | None:intergenic | 55.0% | |
CCAGAGAGTGAGCAAAGTGG+TGG | + | tig0024604:35255-35274 | Msa1418500:CDS | 55.0% | |
GAGAGTGAGCAAAGTGGTGG+TGG | + | tig0024604:35258-35277 | Msa1418500:CDS | 55.0% | |
!! | AGTGAGCAAAGTGGTGGTGG+TGG | + | tig0024604:35261-35280 | Msa1418500:CDS | 55.0% |
GCGCAGACGAACCTTGCTCA+AGG | + | tig0024604:30916-30935 | Msa1418500:CDS | 60.0% | |
CCTGTTCACGCTCATTGGCC+AGG | - | tig0024604:32833-32852 | None:intergenic | 60.0% | |
CCTGGCCAATGAGCGTGAAC+AGG | + | tig0024604:32830-32849 | Msa1418500:CDS | 60.0% | |
GCCTGTAGCTCAAGATGCGG+GGG | + | tig0024604:33701-33720 | Msa1418500:intron | 60.0% | |
ACCCCCGCATCTTGAGCTAC+AGG | - | tig0024604:33705-33724 | None:intergenic | 60.0% | |
GACCAACCCTCCTTTGGGCT+AGG | - | tig0024604:34384-34403 | None:intergenic | 60.0% | |
TGCCATATGGGGACTTGGGG+AGG | + | tig0024604:34754-34773 | Msa1418500:intron | 60.0% | |
AGCCTCCCCAAGTCCCCATA+TGG | - | tig0024604:34759-34778 | None:intergenic | 60.0% | |
!! | TCACTCTCTGGAACCGCCTC+AGG | - | tig0024604:35246-35265 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0024604 | gene | 30544 | 35690 | 30544 | ID=Msa1418500;Name=Msa1418500 |
tig0024604 | mRNA | 30544 | 35690 | 30544 | ID=Msa1418500-mRNA-1;Parent=Msa1418500;Name=Msa1418500-mRNA-1;_AED=0.16;_eAED=0.16;_QI=364|0.83|0.85|1|1|1|7|394|216 |
tig0024604 | exon | 30544 | 30960 | 30544 | ID=Msa1418500-mRNA-1:exon:398;Parent=Msa1418500-mRNA-1 |
tig0024604 | exon | 31064 | 31117 | 31064 | ID=Msa1418500-mRNA-1:exon:399;Parent=Msa1418500-mRNA-1 |
tig0024604 | exon | 31468 | 31567 | 31468 | ID=Msa1418500-mRNA-1:exon:400;Parent=Msa1418500-mRNA-1 |
tig0024604 | exon | 31679 | 31825 | 31679 | ID=Msa1418500-mRNA-1:exon:401;Parent=Msa1418500-mRNA-1 |
tig0024604 | exon | 32558 | 32638 | 32558 | ID=Msa1418500-mRNA-1:exon:402;Parent=Msa1418500-mRNA-1 |
tig0024604 | exon | 32711 | 32856 | 32711 | ID=Msa1418500-mRNA-1:exon:403;Parent=Msa1418500-mRNA-1 |
tig0024604 | exon | 35227 | 35690 | 35227 | ID=Msa1418500-mRNA-1:exon:404;Parent=Msa1418500-mRNA-1 |
tig0024604 | five_prime_UTR | 30544 | 30907 | 30544 | ID=Msa1418500-mRNA-1:five_prime_utr;Parent=Msa1418500-mRNA-1 |
tig0024604 | CDS | 30908 | 30960 | 30908 | ID=Msa1418500-mRNA-1:cds;Parent=Msa1418500-mRNA-1 |
tig0024604 | CDS | 31064 | 31117 | 31064 | ID=Msa1418500-mRNA-1:cds;Parent=Msa1418500-mRNA-1 |
tig0024604 | CDS | 31468 | 31567 | 31468 | ID=Msa1418500-mRNA-1:cds;Parent=Msa1418500-mRNA-1 |
tig0024604 | CDS | 31679 | 31825 | 31679 | ID=Msa1418500-mRNA-1:cds;Parent=Msa1418500-mRNA-1 |
tig0024604 | CDS | 32558 | 32638 | 32558 | ID=Msa1418500-mRNA-1:cds;Parent=Msa1418500-mRNA-1 |
tig0024604 | CDS | 32711 | 32856 | 32711 | ID=Msa1418500-mRNA-1:cds;Parent=Msa1418500-mRNA-1 |
tig0024604 | CDS | 35227 | 35296 | 35227 | ID=Msa1418500-mRNA-1:cds;Parent=Msa1418500-mRNA-1 |
tig0024604 | three_prime_UTR | 35297 | 35690 | 35297 | ID=Msa1418500-mRNA-1:three_prime_utr;Parent=Msa1418500-mRNA-1 |
Gene Sequence |
Protein sequence |