AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0178120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178120 MtrunA17_Chr1g0201121 94.686 207 2 1 1 198 1 207 1.05e-145 403
Msa0178120 MtrunA17_Chr6g0466301 85.096 208 19 3 1 198 1 206 2.23e-127 357
Msa0178120 MtrunA17_Chr6g0465491 85.096 208 19 3 1 198 1 206 2.23e-127 357
Msa0178120 MtrunA17_Chr8g0383261 69.417 206 52 2 2 198 6 209 8.00e-105 300
Msa0178120 MtrunA17_Chr2g0331691 70.149 201 44 2 4 195 6 199 1.05e-101 292
Msa0178120 MtrunA17_Chr4g0004661 68.599 207 56 1 1 198 57 263 1.74e-101 293
Msa0178120 MtrunA17_Chr4g0034871 67.943 209 53 3 1 198 1 206 9.37e-99 284
Msa0178120 MtrunA17_Chr6g0466161 70.000 180 52 1 19 198 10 187 2.33e-86 253
Msa0178120 MtrunA17_Chr6g0465471 69.444 180 53 1 19 198 10 187 1.14e-85 251
Msa0178120 MtrunA17_Chr6g0466431 72.277 101 28 0 1 101 1 101 4.67e-52 162
Msa0178120 MtrunA17_Chr6g0465611 72.277 101 28 0 1 101 1 101 4.67e-52 162
Msa0178120 MtrunA17_Chr2g0276941 38.068 176 86 5 1 160 1 169 7.02e-32 115
Msa0178120 MtrunA17_Chr8g0351861 38.650 163 84 4 8 161 16 171 1.56e-31 114
Msa0178120 MtrunA17_Chr1g0174281 39.394 165 84 4 8 163 15 172 4.81e-31 112
Msa0178120 MtrunA17_Chr4g0040781 33.673 196 114 4 8 194 13 201 5.67e-31 112
Msa0178120 MtrunA17_Chr1g0182301 34.673 199 113 5 8 197 15 205 6.85e-31 112
Msa0178120 MtrunA17_Chr2g0327911 37.126 167 91 4 8 165 15 176 1.16e-30 111
Msa0178120 MtrunA17_Chr7g0214241 37.791 172 91 4 8 170 15 179 1.16e-30 111
Msa0178120 MtrunA17_Chr6g0465601 64.865 74 26 0 100 173 4 77 1.24e-30 107
Msa0178120 MtrunA17_Chr1g0212521 34.158 202 114 6 8 198 15 208 1.38e-30 111
Msa0178120 MtrunA17_Chr8g0381841 37.576 165 87 4 8 163 17 174 1.44e-30 111
Msa0178120 MtrunA17_Chr6g0466421 67.606 71 23 0 103 173 17 87 1.90e-30 107
Msa0178120 MtrunA17_Chr4g0046261 37.037 162 86 4 8 160 13 167 2.43e-30 110
Msa0178120 MtrunA17_Chr1g0182321 34.171 199 114 5 8 197 15 205 2.94e-30 110
Msa0178120 MtrunA17_Chr4g0032201 33.173 208 113 6 8 196 12 212 3.67e-30 110
Msa0178120 MtrunA17_Chr3g0123821 37.576 165 87 4 8 163 16 173 6.31e-30 110
Msa0178120 MtrunA17_Chr4g0055081 31.527 203 118 4 10 198 11 206 8.75e-30 109
Msa0178120 MtrunA17_Chr4g0030911 34.184 196 112 5 8 194 15 202 1.11e-29 108
Msa0178120 MtrunA17_Chr2g0325091 38.554 166 84 5 8 163 11 168 1.40e-29 108
Msa0178120 MtrunA17_Chr8g0382221 33.824 204 113 6 10 198 11 207 1.42e-29 108
Msa0178120 MtrunA17_Chr2g0283131 32.984 191 112 4 8 189 13 196 1.43e-29 108
Msa0178120 MtrunA17_Chr2g0276931 34.940 166 92 4 8 164 9 167 1.66e-29 108
Msa0178120 MtrunA17_Chr7g0231131 35.377 212 108 7 8 198 15 218 1.72e-29 108
Msa0178120 MtrunA17_Chr7g0263071 37.126 167 90 4 8 165 15 175 2.12e-29 108
Msa0178120 MtrunA17_Chr8g0390561 36.264 182 98 6 10 180 11 185 2.53e-29 107
Msa0178120 MtrunA17_Chr3g0112681 35.758 165 90 4 8 163 12 169 3.40e-29 107
Msa0178120 MtrunA17_Chr4g0055651 36.145 166 90 4 8 164 8 166 3.70e-29 107
Msa0178120 MtrunA17_Chr8g0335471 36.145 166 90 4 8 164 8 166 5.17e-29 107
Msa0178120 MtrunA17_Chr6g0458081 36.047 172 94 4 8 170 6 170 6.36e-29 107
Msa0178120 MtrunA17_Chr5g0400131 31.373 204 118 5 10 198 11 207 8.95e-29 106
Msa0178120 MtrunA17_Chr2g0315551 37.654 162 85 5 8 160 13 167 1.05e-28 106
Msa0178120 MtrunA17_Chr7g0250531 35.714 168 92 4 8 166 8 168 1.34e-28 105
Msa0178120 MtrunA17_Chr5g0433561 36.970 165 88 4 10 165 12 169 1.54e-28 105
Msa0178120 MtrunA17_Chr3g0123971 32.020 203 117 4 10 198 11 206 1.55e-28 105
Msa0178120 MtrunA17_Chr3g0109721 36.970 165 88 4 10 165 12 169 7.35e-28 103
Msa0178120 MtrunA17_Chr7g0234201 35.465 172 95 4 8 170 13 177 8.07e-28 104
Msa0178120 MtrunA17_Chr2g0290891 32.227 211 114 7 8 196 6 209 4.54e-27 102
Msa0178120 MtrunA17_Chr8g0349711 32.203 177 104 4 3 170 1 170 9.60e-27 101
Msa0178120 MtrunA17_Chr2g0319951 35.185 162 89 4 8 160 13 167 2.02e-26 100
Msa0178120 MtrunA17_Chr8g0349681 35.088 171 95 4 9 170 176 339 3.17e-26 105
Msa0178120 MtrunA17_Chr8g0349681 32.584 178 104 4 8 176 384 554 3.46e-23 96.3
Msa0178120 MtrunA17_Chr8g0349681 34.132 167 94 5 3 160 8 167 1.04e-22 94.7
Msa0178120 MtrunA17_Chr1g0189361 34.731 167 93 3 8 165 14 173 5.41e-26 99.8
Msa0178120 MtrunA17_Chr7g0275991 35.583 163 89 4 8 161 20 175 6.43e-26 99.8
Msa0178120 MtrunA17_Chr6g0482721 34.969 163 90 4 8 161 12 167 4.29e-25 97.4
Msa0178120 MtrunA17_Chr1g0199331 35.928 167 90 5 9 165 32 191 9.69e-25 95.9
Msa0178120 MtrunA17_Chr8g0346421 34.969 163 90 4 8 161 26 181 1.33e-24 96.3
Msa0178120 MtrunA17_Chr8g0392931 33.871 186 105 5 8 182 14 192 1.64e-24 95.9
Msa0178120 MtrunA17_Chr8g0384311 30.693 202 121 6 8 196 13 208 1.76e-21 87.4
Msa0178120 MtrunA17_Chr7g0265001 34.568 162 88 6 10 160 18 172 8.16e-21 85.9
Msa0178120 MtrunA17_Chr1g0159481 34.568 162 91 5 8 160 17 172 3.22e-20 84.3
Msa0178120 MtrunA17_Chr3g0130271 34.969 163 90 6 8 160 12 168 3.76e-20 84.0
Msa0178120 MtrunA17_Chr3g0138121 25.654 191 120 5 9 190 14 191 5.71e-19 81.3
Msa0178120 MtrunA17_Chr3g0138101 25.654 191 120 5 9 190 14 191 5.83e-19 81.3
Msa0178120 MtrunA17_Chr3g0138111 25.654 191 120 5 9 190 14 191 6.14e-19 81.3
Msa0178120 MtrunA17_Chr1g0180291 31.343 201 119 6 9 196 15 209 8.86e-19 80.5
Msa0178120 MtrunA17_Chr2g0326141 64.912 57 20 0 120 176 299 355 2.50e-18 81.6
Msa0178120 MtrunA17_Chr1g0197331 35.583 163 88 6 9 160 16 172 5.72e-18 78.6
Msa0178120 MtrunA17_Chr6g0486041 28.877 187 109 6 8 176 6 186 1.57e-16 74.3
Msa0178120 MtrunA17_Chr2g0325101 28.495 186 107 7 1 168 1 178 1.97e-13 65.9
Msa0178120 MtrunA17_Chr5g0405791 29.775 178 99 8 1 160 1 170 5.18e-13 64.7
Msa0178120 MtrunA17_Chr8g0371501 30.337 178 98 8 1 160 1 170 8.72e-13 64.3
Msa0178120 MtrunA17_Chr4g0037021 26.178 191 117 6 8 180 6 190 1.14e-12 63.9
Msa0178120 MtrunA17_Chr3g0117931 26.486 185 112 6 8 174 8 186 1.57e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178120 AT4G09720.1 78.261 207 35 2 1 198 1 206 5.89e-119 336
Msa0178120 AT1G22740.1 78.261 207 32 2 1 198 1 203 5.66e-116 328
Msa0178120 AT4G09720.4 76.415 212 35 3 1 198 1 211 2.01e-115 327
Msa0178120 AT4G09720.3 74.312 218 35 3 1 198 1 217 2.15e-115 327
Msa0178120 AT4G09720.6 81.395 172 31 1 27 198 2 172 6.13e-104 296
Msa0178120 AT4G09720.5 81.395 172 31 1 27 198 2 172 6.13e-104 296
Msa0178120 AT4G09720.2 81.395 172 31 1 27 198 2 172 6.13e-104 296
Msa0178120 AT1G52280.1 68.900 209 51 3 1 198 1 206 7.43e-101 290
Msa0178120 AT3G16100.1 67.464 209 54 3 1 198 1 206 2.37e-99 286
Msa0178120 AT3G18820.1 66.986 209 55 3 1 198 1 206 4.12e-97 281
Msa0178120 AT2G21880.1 66.038 212 55 4 2 198 3 212 1.31e-96 280
Msa0178120 AT1G49300.2 64.115 209 61 3 1 198 1 206 2.71e-93 271
Msa0178120 AT1G49300.1 64.115 209 61 3 1 198 1 206 2.71e-93 271
Msa0178120 AT2G21880.4 67.204 186 53 3 19 198 4 187 4.05e-88 257
Msa0178120 AT2G21880.3 67.204 186 53 3 19 198 4 187 4.05e-88 257
Msa0178120 AT2G21880.2 62.264 212 55 5 2 198 3 204 7.64e-87 254
Msa0178120 AT5G39620.1 52.683 205 82 3 6 198 3 204 3.74e-70 212
Msa0178120 AT3G12160.1 35.849 212 108 6 8 198 15 219 1.75e-33 119
Msa0178120 AT5G47960.1 35.377 212 107 7 8 196 15 219 1.94e-32 117
Msa0178120 AT5G59840.1 34.000 200 117 4 8 198 15 208 1.69e-31 114
Msa0178120 AT2G33870.1 38.889 162 83 5 8 160 13 167 2.84e-31 113
Msa0178120 AT3G53610.2 33.668 199 115 5 8 197 15 205 8.32e-31 112
Msa0178120 AT3G53610.3 33.668 199 115 5 8 197 15 205 8.32e-31 112
Msa0178120 AT3G53610.1 33.668 199 115 5 8 197 15 205 8.32e-31 112
Msa0178120 AT1G28550.1 38.889 162 83 4 8 160 13 167 1.03e-30 112
Msa0178120 AT1G09630.1 37.576 165 87 4 8 163 12 169 2.07e-30 111
Msa0178120 AT5G45750.1 37.654 162 85 4 8 160 13 167 2.18e-30 111
Msa0178120 AT3G46060.2 33.000 200 119 4 8 198 15 208 2.73e-30 111
Msa0178120 AT3G46060.3 33.000 200 119 4 8 198 15 208 2.73e-30 111
Msa0178120 AT3G46060.1 33.000 200 119 4 8 198 15 208 2.73e-30 111
Msa0178120 AT5G60860.1 37.654 162 85 4 8 160 13 167 2.95e-30 110
Msa0178120 AT3G15060.1 38.272 162 84 4 8 160 13 167 5.49e-30 110
Msa0178120 AT3G11730.1 36.416 173 94 4 1 164 1 166 2.29e-29 108
Msa0178120 AT2G44610.1 32.195 205 116 5 10 198 11 208 2.44e-29 108
Msa0178120 AT4G17530.1 35.227 176 95 5 8 171 8 176 3.51e-29 107
Msa0178120 AT5G47200.1 35.227 176 95 5 8 171 8 176 4.74e-29 107
Msa0178120 AT5G59150.1 34.545 165 92 4 8 163 12 169 7.77e-29 107
Msa0178120 AT1G05810.1 37.349 166 88 4 4 160 8 166 8.39e-29 107
Msa0178120 AT1G07410.1 31.884 207 116 6 8 196 12 211 1.07e-28 107
Msa0178120 AT1G05810.2 37.349 166 88 4 4 160 54 212 2.12e-28 107
Msa0178120 AT2G31680.1 34.302 172 97 4 8 170 12 176 2.69e-28 105
Msa0178120 AT5G65270.1 36.970 165 88 4 8 163 17 174 2.79e-28 106
Msa0178120 AT4G18800.1 35.802 162 88 4 8 160 13 167 3.19e-28 105
Msa0178120 AT1G16920.1 36.420 162 87 4 8 160 13 167 4.23e-28 105
Msa0178120 AT1G18200.1 36.364 165 89 5 8 163 13 170 6.43e-28 105
Msa0178120 AT2G43130.1 34.884 172 96 4 8 170 12 176 6.80e-28 104
Msa0178120 AT3G46830.1 34.545 165 92 4 8 163 12 169 9.33e-28 104
Msa0178120 AT3G46830.2 34.545 165 92 4 8 163 12 169 9.33e-28 104
Msa0178120 AT4G35860.1 33.721 172 98 4 8 170 6 170 9.60e-28 104
Msa0178120 AT1G02130.1 32.308 195 107 5 8 184 8 195 1.62e-27 103
Msa0178120 AT3G09900.1 35.417 192 107 5 8 190 15 198 2.24e-27 103
Msa0178120 AT4G18430.1 29.319 191 119 4 8 189 13 196 2.26e-27 103
Msa0178120 AT1G73640.1 35.758 165 90 4 8 163 13 170 3.02e-27 103
Msa0178120 AT4G17170.1 32.701 211 113 7 8 196 6 209 3.68e-27 102
Msa0178120 AT4G39990.1 35.185 162 89 4 8 160 17 171 8.73e-27 102
Msa0178120 AT5G03520.1 34.896 192 108 5 8 190 15 198 9.00e-27 102
Msa0178120 AT5G10260.1 31.068 206 116 6 10 198 11 207 1.82e-26 100
Msa0178120 AT5G45130.1 36.364 165 89 4 10 165 12 169 3.59e-26 100
Msa0178120 AT4G17160.1 34.731 167 93 4 9 166 7 166 4.84e-26 99.8
Msa0178120 AT4G39890.1 34.545 165 93 4 9 164 10 168 7.22e-26 99.8
Msa0178120 AT4G19640.1 35.758 165 90 4 10 165 12 169 9.56e-26 99.0
Msa0178120 AT1G06400.1 34.568 162 90 3 8 160 13 167 1.71e-25 98.6
Msa0178120 AT2G22290.1 31.373 204 118 6 10 198 11 207 1.92e-25 98.2
Msa0178120 AT1G01200.1 35.583 163 90 4 8 161 28 184 2.79e-25 98.6
Msa0178120 AT5G45130.2 36.196 163 88 4 12 165 22 177 3.03e-25 97.8
Msa0178120 AT3G07410.1 34.302 172 97 3 8 170 12 176 3.72e-25 97.8
Msa0178120 AT5G64990.1 36.000 175 88 5 10 171 9 172 5.37e-25 97.1
Msa0178120 AT5G03520.2 40.458 131 72 3 35 165 41 165 2.14e-24 95.5
Msa0178120 AT5G47520.1 34.132 167 94 4 8 165 14 173 2.17e-24 95.9
Msa0178120 AT3G54840.2 34.146 164 91 5 9 162 34 190 6.53e-23 91.3
Msa0178120 AT3G54840.1 34.132 167 93 5 9 165 34 193 1.45e-22 90.5
Msa0178120 AT4G35860.2 36.154 130 76 3 41 170 2 124 2.35e-22 89.0
Msa0178120 AT5G64990.2 34.615 182 88 6 10 171 9 179 2.41e-22 90.5
Msa0178120 AT3G54840.3 33.939 165 92 5 11 165 2 159 3.83e-22 88.6
Msa0178120 AT1G43890.3 36.810 163 86 6 8 160 13 168 8.29e-22 89.0
Msa0178120 AT1G43890.1 36.810 163 86 6 8 160 13 168 8.29e-22 89.0
Msa0178120 AT1G43890.2 36.810 163 86 6 8 160 13 168 8.29e-22 89.0
Msa0178120 AT4G19640.2 35.766 137 74 3 10 137 12 143 1.26e-21 86.7
Msa0178120 AT4G19640.3 37.500 120 62 2 10 120 12 127 8.41e-21 85.9
Msa0178120 AT5G03530.2 31.841 201 116 7 10 196 15 208 5.70e-20 84.0
Msa0178120 AT5G03530.1 31.841 201 116 7 10 196 15 208 5.70e-20 84.0
Msa0178120 AT5G20010.1 26.203 187 116 5 9 186 14 187 1.18e-19 83.6
Msa0178120 AT5G20020.1 26.203 187 116 5 9 186 14 187 1.91e-19 82.8
Msa0178120 AT5G59150.2 34.146 123 74 3 41 163 3 118 4.19e-19 80.9
Msa0178120 AT5G55190.1 25.654 191 120 5 9 190 14 191 9.81e-19 80.9
Msa0178120 AT4G28950.1 29.730 185 108 7 8 176 6 184 2.40e-17 77.0
Msa0178120 AT5G55080.1 24.865 185 117 5 9 184 14 185 1.84e-16 75.1
Msa0178120 AT3G09910.3 31.515 165 90 6 9 160 14 168 3.15e-16 73.9
Msa0178120 AT3G09910.1 31.515 165 90 6 9 160 14 168 3.15e-16 73.9
Msa0178120 AT3G09910.2 31.515 165 90 6 9 160 14 168 3.15e-16 73.9
Msa0178120 AT3G09910.5 31.056 161 96 5 9 160 14 168 5.55e-16 73.2
Msa0178120 AT3G09910.4 31.056 161 96 5 9 160 14 168 5.55e-16 73.2
Msa0178120 AT5G45970.1 27.933 179 105 6 8 168 6 178 1.56e-13 66.6
Msa0178120 AT1G20090.1 28.492 179 104 6 8 168 5 177 4.64e-13 65.5
Msa0178120 AT1G75840.1 29.032 186 106 7 1 168 1 178 5.67e-13 65.1
Msa0178120 AT4G35020.1 28.495 186 107 7 1 168 1 178 1.82e-12 63.5
Msa0178120 AT4G35020.2 28.495 186 107 7 1 168 1 178 1.82e-12 63.5
Msa0178120 AT4G35020.3 28.495 186 107 7 1 168 1 178 1.82e-12 63.5
Msa0178120 AT3G51300.1 28.652 178 101 7 1 160 1 170 3.27e-12 63.2
Msa0178120 AT3G48040.1 28.090 178 104 6 1 160 1 172 9.64e-12 62.0
Msa0178120 AT2G44690.1 27.485 171 100 6 8 160 18 182 1.34e-11 61.6
Msa0178120 AT2G17800.2 28.090 178 102 7 1 160 1 170 1.73e-11 61.2
Msa0178120 AT2G17800.1 28.090 178 102 7 1 160 1 170 1.73e-11 61.2
Msa0178120 AT5G62880.1 27.528 178 105 6 1 160 1 172 1.90e-11 61.2
Msa0178120 AT4G35950.1 28.090 178 102 7 1 160 1 170 2.35e-11 60.8
Msa0178120 AT5G62880.2 27.222 180 107 6 1 162 1 174 6.10e-11 59.3

Find 78 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTCCAAGCAATATAAA+TGG 0.260081 1_4:-65489633 None:intergenic
AAACAATAGTACTATCAAAA+AGG 0.261754 1_4:-65492476 None:intergenic
AATGGAAATGCCCTTGTATC+AGG 0.343477 1_4:-65489615 None:intergenic
GGTGGATGTGCATGCTGATA+TGG 0.355032 1_4:+65492327 Msa0178120:exon
CTCGAACTACCTATGTATAA+TGG 0.355553 1_4:-65487718 None:intergenic
CAAGTTTAGTCAGCAGTATA+AGG 0.371559 1_4:+65488528 Msa0178120:CDS
GCATTTCCATTTATATTGCT+TGG 0.372285 1_4:+65489627 Msa0178120:CDS
TGATTTACCACGAATTAGAT+AGG 0.376006 1_4:+65492550 Msa0178120:three_prime_UTR
CGTTTGATTCACTTGACAAC+TGG 0.386540 1_4:+65488830 Msa0178120:CDS
TGCGTGAAATTGAGCTTAAT+TGG 0.388931 1_4:-65487912 None:intergenic
CCACCACTTTGCTCACTCTC+TGG 0.394400 1_4:-65492303 None:intergenic
AAAAGTGAGTAGTTTATATA+TGG 0.396519 1_4:-65487588 None:intergenic
GGAAACAAGATTGATATTGA+TGG 0.401120 1_4:+65489648 Msa0178120:CDS
CCTGTTCACGCTCATTGGCC+AGG 0.406113 1_4:-65489878 None:intergenic
CTTTGAGACATCTGCAAAAG+AGG 0.406390 1_4:+65489812 Msa0178120:CDS
CTTGAGAATGTTGCACTCCT+AGG 0.412075 1_4:+65492512 Msa0178120:three_prime_UTR
TTGCTCAAGGTCATTGTTCT+CGG 0.416277 1_4:+65487974 Msa0178120:CDS
CATGTCCTGTTCACGCTCAT+TGG 0.416752 1_4:-65489883 None:intergenic
CTCAAAAGGGGAAAAGGAAA+AGG 0.427399 1_4:-65487796 None:intergenic
TCACTCTCTGGAACCGCCTC+AGG 0.429595 1_4:-65492291 None:intergenic
AAGGACTGGTGTGCTTCAAA+AGG 0.438389 1_4:+65489777 Msa0178120:CDS
ATGATGATTCTGTATTGTAT+TGG 0.441236 1_4:-65487837 None:intergenic
CCTGGCCAATGAGCGTGAAC+AGG 0.444323 1_4:+65489878 Msa0178120:CDS
TCATTGTTCTCGGCGATAGC+GGG 0.448213 1_4:+65487984 Msa0178120:CDS
TTATGAATGAAAACGATTGA+AGG 0.448624 1_4:+65487755 Msa0178120:five_prime_UTR
ATGTCAACTTCGAACTCAAA+AGG 0.448824 1_4:-65487810 None:intergenic
TGGAAGTACTGAATAATTGC+AGG 0.450628 1_4:+65492347 Msa0178120:three_prime_UTR
TTCGAACTCAAAAGGGGAAA+AGG 0.453130 1_4:-65487802 None:intergenic
AAAACGCAACTCCAAGACTT+TGG 0.454601 1_4:-65488756 None:intergenic
TCTAATTCGTGGTAAATCAA+TGG 0.457966 1_4:-65492546 None:intergenic
TGCTGAGTACATCATTCAAA+TGG 0.459338 1_4:-65492635 None:intergenic
GCACGAGGAGTTTCTCAAAC+AGG 0.463788 1_4:+65488852 Msa0178120:CDS
TGTCATTTCTTTGTTTATGT+CGG 0.468037 1_4:+65487691 Msa0178120:five_prime_UTR
CAGCAGTATAAGGCAACAAT+TGG 0.468961 1_4:+65488538 Msa0178120:CDS
CGCAATGACATAGCTGGTTA+CGG 0.471076 1_4:-65487941 None:intergenic
TGTCAACTTCGAACTCAAAA+GGG 0.471997 1_4:-65487809 None:intergenic
AGTGAGCAAAGTGGTGGTGG+TGG 0.473564 1_4:+65492309 Msa0178120:CDS
CAAGAGAGATTCCAAAGTCT+TGG 0.473805 1_4:+65488745 Msa0178120:CDS
AATTTGAAACACAGCATTGA+AGG 0.485101 1_4:-65492375 None:intergenic
CAGTGCTTCACATAGTTGAA+TGG 0.491680 1_4:+65492672 Msa0178120:three_prime_UTR
AGGCAAACCCTCCTGATACA+AGG 0.497414 1_4:+65489604 Msa0178120:intron
CTGTTCACGCTCATTGGCCA+GGG 0.503718 1_4:-65489877 None:intergenic
CTTCAAGCCTATCTAATTCG+TGG 0.509000 1_4:-65492557 None:intergenic
TTTGCAGATGTCTCAAAGTA+GGG 0.510999 1_4:-65489807 None:intergenic
ACAATTTACCCACACAATCA+TGG 0.519807 1_4:-65492439 None:intergenic
CACTGTATGCCATGATTGTG+TGG 0.520653 1_4:+65492430 Msa0178120:three_prime_UTR
GTCATTGTTCTCGGCGATAG+CGG 0.540348 1_4:+65487983 Msa0178120:CDS
AGGACTGGTGTGCTTCAAAA+GGG 0.543802 1_4:+65489778 Msa0178120:CDS
TTGAGAATGTTGCACTCCTA+GGG 0.559466 1_4:+65492513 Msa0178120:three_prime_UTR
CGTCTGCGCAATGACATAGC+TGG 0.563049 1_4:-65487947 None:intergenic
ATTTGAAACACAGCATTGAA+GGG 0.563465 1_4:-65492374 None:intergenic
ATGAATTGTTTAGCGTTGAG+AGG 0.565012 1_4:-65487886 None:intergenic
CTGAGAAGAAAGCAAAGGAC+TGG 0.565046 1_4:+65489763 Msa0178120:CDS
ATGACATAGCTGGTTACGGT+GGG 0.565949 1_4:-65487937 None:intergenic
TGGTAGATATGGGACACTGC+TGG 0.568483 1_4:+65488721 Msa0178120:intron
GGCAAACCCTCCTGATACAA+GGG 0.575107 1_4:+65489605 Msa0178120:intron
ACAAGATTGATATTGATGGC+GGG 0.576782 1_4:+65489652 Msa0178120:CDS
GTGTATTGCAAAGACTGCCC+TGG 0.577400 1_4:+65489860 Msa0178120:CDS
GAGAGTGAGCAAAGTGGTGG+TGG 0.590052 1_4:+65492306 Msa0178120:CDS
TCAAAAGGGGAAAAGGAAAA+GGG 0.595793 1_4:-65487795 None:intergenic
GTCGGTAATCCATTATACAT+AGG 0.607162 1_4:+65487709 Msa0178120:five_prime_UTR
AACAAGATTGATATTGATGG+CGG 0.609685 1_4:+65489651 Msa0178120:CDS
TTGGTGTTCAAATTGAGATG+TGG 0.611490 1_4:+65492595 Msa0178120:three_prime_UTR
GAGAACAATGACCTTGAGCA+AGG 0.617108 1_4:-65487972 None:intergenic
GGAAATGCCCTTGTATCAGG+AGG 0.623997 1_4:-65489612 None:intergenic
GCGCAGACGAACCTTGCTCA+AGG 0.628869 1_4:+65487961 Msa0178120:CDS
GTCAACTTCGAACTCAAAAG+GGG 0.633038 1_4:-65487808 None:intergenic
TTCACTTGACAACTGGCACG+AGG 0.633292 1_4:+65488837 Msa0178120:CDS
GAAATGCCCTTGTATCAGGA+GGG 0.644750 1_4:-65489611 None:intergenic
CGTATGATGTGAACGTCATG+AGG 0.648807 1_4:+65488806 Msa0178120:CDS
TGATTATTTATAGCTAAACA+AGG 0.651063 1_4:-65487645 None:intergenic
CCAGAGAGTGAGCAAAGTGG+TGG 0.665389 1_4:+65492303 Msa0178120:CDS
GGTTTCTGAGAAGAAAGCAA+AGG 0.667441 1_4:+65489758 Msa0178120:intron
ACTGTATGCCATGATTGTGT+GGG 0.672430 1_4:+65492431 Msa0178120:three_prime_UTR
TGACATAGCTGGTTACGGTG+GGG 0.672648 1_4:-65487936 None:intergenic
AATGACATAGCTGGTTACGG+TGG 0.700311 1_4:-65487938 None:intergenic
TGATGGCGGGAATAGTCGAG+TGG 0.710562 1_4:+65489665 Msa0178120:CDS
GTTCCAGAGAGTGAGCAAAG+TGG 0.720662 1_4:+65492300 Msa0178120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTAATTATAATGTTTTTAT+TGG + chr1_4:65490000-65490019 Msa0178120:intron 10.0%
!! ACAAATATTTAACAAATTAA+AGG - chr1_4:65490049-65490068 None:intergenic 10.0%
!!! TGAATATAATTTTAAGAAAA+TGG - chr1_4:65490318-65490337 None:intergenic 10.0%
!! AAATAAAAACTTTATGAGAT+GGG - chr1_4:65488228-65488247 None:intergenic 15.0%
!! AAAATAAAAACTTTATGAGA+TGG - chr1_4:65488229-65488248 None:intergenic 15.0%
!!! AAAGTTTTGACTTTATTTTT+TGG + chr1_4:65488386-65488405 Msa0178120:intron 15.0%
!!! AAGTTTTGACTTTATTTTTT+GGG + chr1_4:65488387-65488406 Msa0178120:intron 15.0%
!! TTATAGATATTATTTCCTTA+TGG + chr1_4:65488458-65488477 Msa0178120:intron 15.0%
!! TATAGATATTATTTCCTTAT+GGG + chr1_4:65488459-65488478 Msa0178120:intron 15.0%
!!! AAAATTTTGTTTATTTGAGT+GGG + chr1_4:65488683-65488702 Msa0178120:intron 15.0%
!!! TCTTGATATTTTATAGTTTA+TGG + chr1_4:65488964-65488983 Msa0178120:intron 15.0%
!!! AATAAATACATGCTTTTTTT+AGG + chr1_4:65489108-65489127 Msa0178120:intron 15.0%
!! AGGATTGTTTATATAATAAT+AGG + chr1_4:65489128-65489147 Msa0178120:intron 15.0%
!!! TATTTTTTTTAGAAACAAAC+AGG - chr1_4:65489389-65489408 None:intergenic 15.0%
!!! TTTGTTTCTAAAAAAAATAC+TGG + chr1_4:65489390-65489409 Msa0178120:intron 15.0%
!! ATAAGATAATTAGACATTTA+TGG - chr1_4:65489733-65489752 None:intergenic 15.0%
!!! ATTAGTTTGTTATTATTCTT+TGG + chr1_4:65490106-65490125 Msa0178120:intron 15.0%
!!! GAAATATTTTTTGTCAATAT+AGG - chr1_4:65490369-65490388 None:intergenic 15.0%
!! TCAAAGAAATCTTTATATTT+GGG - chr1_4:65490523-65490542 None:intergenic 15.0%
!! ATCAAAGAAATCTTTATATT+TGG - chr1_4:65490524-65490543 None:intergenic 15.0%
!! TATTAACAAAATACTAAGTT+AGG + chr1_4:65491463-65491482 Msa0178120:intron 15.0%
!! TTTAAAAATTCCTATTTGAA+AGG + chr1_4:65491934-65491953 Msa0178120:intron 15.0%
!! TGATTATTTATAGCTAAACA+AGG - chr1_4:65487648-65487667 None:intergenic 20.0%
!! CAATGAAAATGAAAGAAAAT+GGG - chr1_4:65488087-65488106 None:intergenic 20.0%
!! TTAAGTGTGAAATTAACAAA+CGG - chr1_4:65488166-65488185 None:intergenic 20.0%
!!! GTTTTTATTTTTAACTCATC+TGG + chr1_4:65488238-65488257 Msa0178120:intron 20.0%
!!! TAAGTGATAATTAGTTTGTT+TGG + chr1_4:65488315-65488334 Msa0178120:intron 20.0%
!!! AACTTCTGTTGTTTTTATTA+TGG + chr1_4:65488351-65488370 Msa0178120:intron 20.0%
!! ATAGATATTATTTCCTTATG+GGG + chr1_4:65488460-65488479 Msa0178120:intron 20.0%
!! CACATATCTAATTTAGTTAA+GGG - chr1_4:65488503-65488522 None:intergenic 20.0%
!!! GAAAATTTTGTTTATTTGAG+TGG + chr1_4:65488682-65488701 Msa0178120:intron 20.0%
!! TCAAGAAAAAAATTAATAGC+AGG - chr1_4:65488950-65488969 None:intergenic 20.0%
!!! ACATTCATTTTAATGTCTAT+TGG - chr1_4:65489037-65489056 None:intergenic 20.0%
!!! AGTGTTCTATCTTTTAAATT+GGG + chr1_4:65489356-65489375 Msa0178120:intron 20.0%
!! GTTATAAAAAGATGAAAGAA+TGG - chr1_4:65489438-65489457 None:intergenic 20.0%
!! ACATTTATGGACATAAATTA+AGG - chr1_4:65489720-65489739 None:intergenic 20.0%
!!! TTATTCTTTGGAAAATATCA+AGG + chr1_4:65490118-65490137 Msa0178120:intron 20.0%
!!! CTCTTACTTTTTATGAAATA+AGG - chr1_4:65490284-65490303 None:intergenic 20.0%
!! TATTTCATAAAAAGTAAGAG+CGG + chr1_4:65490284-65490303 Msa0178120:intron 20.0%
!! ATATATTAAAACAACGATGA+TGG - chr1_4:65490494-65490513 None:intergenic 20.0%
!!! TCATCGTTGTTTTAATATAT+TGG + chr1_4:65490494-65490513 Msa0178120:intron 20.0%
!! AAAGAAATCTTTATATTTGG+GGG - chr1_4:65490521-65490540 None:intergenic 20.0%
!! CAAAGAAATCTTTATATTTG+GGG - chr1_4:65490522-65490541 None:intergenic 20.0%
!!! TTATGATACTACTAATTTTG+AGG - chr1_4:65490990-65491009 None:intergenic 20.0%
!!! ACTTAGTATTTTGTTAATAG+AGG - chr1_4:65491462-65491481 None:intergenic 20.0%
!! ATGAAAAAGATAAGAGTTAT+TGG + chr1_4:65491743-65491762 Msa0178120:intron 20.0%
!!! TAGGAATTTTTAAAGATGAT+TGG - chr1_4:65491928-65491947 None:intergenic 20.0%
!!! TAAAATTTTCTTCCTTTTCT+GGG + chr1_4:65492143-65492162 Msa0178120:intron 20.0%
!! ACTCAATTTGAAAATTTAGA+AGG - chr1_4:65492194-65492213 None:intergenic 20.0%
!!! CAAATTCTTCAAATTCTTTT+TGG + chr1_4:65492392-65492411 Msa0178120:three_prime_UTR 20.0%
!! AACAATAGTACTATCAAAAA+GGG - chr1_4:65492478-65492497 None:intergenic 20.0%
!! AAACAATAGTACTATCAAAA+AGG - chr1_4:65492479-65492498 None:intergenic 20.0%
!!! TTTTGATAGTACTATTGTTT+TGG + chr1_4:65492479-65492498 Msa0178120:three_prime_UTR 20.0%
!!! TTTGATAGTACTATTGTTTT+GGG + chr1_4:65492480-65492499 Msa0178120:three_prime_UTR 20.0%
!! TGTCATTTCTTTGTTTATGT+CGG + chr1_4:65487691-65487710 Msa0178120:five_prime_UTR 25.0%
! TTATGAATGAAAACGATTGA+AGG + chr1_4:65487755-65487774 Msa0178120:five_prime_UTR 25.0%
! ATGATGATTCTGTATTGTAT+TGG - chr1_4:65487840-65487859 None:intergenic 25.0%
! GAATGGAAGGAAAAAAAATA+CGG - chr1_4:65488042-65488061 None:intergenic 25.0%
! ATTATTACGATTTGAATGGA+AGG - chr1_4:65488055-65488074 None:intergenic 25.0%
! TCGAATTATTACGATTTGAA+TGG - chr1_4:65488059-65488078 None:intergenic 25.0%
! GCAATGAAAATGAAAGAAAA+TGG - chr1_4:65488088-65488107 None:intergenic 25.0%
! TAAGTGTGAAATTAACAAAC+GGG - chr1_4:65488165-65488184 None:intergenic 25.0%
! ATTTCACACTTAATTGTTCA+CGG + chr1_4:65488173-65488192 Msa0178120:intron 25.0%
! GCACATATCTAATTTAGTTA+AGG - chr1_4:65488504-65488523 None:intergenic 25.0%
!!! CAACAAAAGTGTTGTTTATA+AGG - chr1_4:65488891-65488910 None:intergenic 25.0%
! CATAATGATCAAATTAAGTG+TGG - chr1_4:65489014-65489033 None:intergenic 25.0%
! TAATAGGTTTATGTTAGTTG+AGG + chr1_4:65489144-65489163 Msa0178120:intron 25.0%
! AATAGGTTTATGTTAGTTGA+GGG + chr1_4:65489145-65489164 Msa0178120:intron 25.0%
! ATGTAACCTATAAATTAGTC+AGG + chr1_4:65489253-65489272 Msa0178120:intron 25.0%
!! TAATCAACGGATAAAGTTTT+GGG + chr1_4:65489293-65489312 Msa0178120:intron 25.0%
!! CAGTGTTCTATCTTTTAAAT+TGG + chr1_4:65489355-65489374 Msa0178120:intron 25.0%
!! GTGTTCTATCTTTTAAATTG+GGG + chr1_4:65489357-65489376 Msa0178120:intron 25.0%
! AAGAATGGAAGTCAAATATA+AGG - chr1_4:65489423-65489442 None:intergenic 25.0%
! TTGTTTCCAAGCAATATAAA+TGG - chr1_4:65489636-65489655 None:intergenic 25.0%
! GAATTGTATTAACCATTGTA+TGG + chr1_4:65490022-65490041 Msa0178120:intron 25.0%
!! TTTTTCTCTGAATTTACAAC+AGG - chr1_4:65490077-65490096 None:intergenic 25.0%
!!! ATTTTTTGTCAATATAGGTG+TGG - chr1_4:65490364-65490383 None:intergenic 25.0%
! CTAAAAGAGGATAAATTAGA+TGG - chr1_4:65490391-65490410 None:intergenic 25.0%
!! TCTTGTGAATATTCTAAAAG+AGG - chr1_4:65490404-65490423 None:intergenic 25.0%
! GAATCAAATTATCTTCTAGA+AGG - chr1_4:65490918-65490937 None:intergenic 25.0%
! AGATAATTTGATTCAGATGA+TGG + chr1_4:65490924-65490943 Msa0178120:intron 25.0%
! TTATCTGTTAGAAAGAAGAA+TGG + chr1_4:65491348-65491367 Msa0178120:intron 25.0%
!!! ATTTCTTTTTCAGTTGCTAA+GGG - chr1_4:65491553-65491572 None:intergenic 25.0%
!!! AATTTCTTTTTCAGTTGCTA+AGG - chr1_4:65491554-65491573 None:intergenic 25.0%
!!! ATAAGAGTTATTGGTTCAAA+AGG + chr1_4:65491752-65491771 Msa0178120:intron 25.0%
! ATTGAAAGATCAATGTCTTT+CGG - chr1_4:65491841-65491860 None:intergenic 25.0%
! TGAGTTAAATGCATCAAAAT+TGG - chr1_4:65491871-65491890 None:intergenic 25.0%
! ATTCCTATTACAAACATCAA+TGG + chr1_4:65491992-65492011 Msa0178120:intron 25.0%
!! CTAAAATTTTCTTCCTTTTC+TGG + chr1_4:65492142-65492161 Msa0178120:intron 25.0%
!! AAAATTTTCTTCCTTTTCTG+GGG + chr1_4:65492144-65492163 Msa0178120:intron 25.0%
!! TTGAATTGCAGATATTTTCA+AGG + chr1_4:65492264-65492283 Msa0178120:intron 25.0%
!! TGAATTGCAGATATTTTCAA+GGG + chr1_4:65492265-65492284 Msa0178120:intron 25.0%
!!! GAAGTGATTTTTGTTTTCTT+TGG + chr1_4:65492576-65492595 Msa0178120:three_prime_UTR 25.0%
! TTTCTTTCATTTTCATTGCC+AGG + chr1_4:65488089-65488108 Msa0178120:intron 30.0%
! TTCTTTCATTTTCATTGCCA+GGG + chr1_4:65488090-65488109 Msa0178120:intron 30.0%
TTTCACACTTAATTGTTCAC+GGG + chr1_4:65488174-65488193 Msa0178120:intron 30.0%
AACCTTAAAGAAGTCAAATC+AGG - chr1_4:65488421-65488440 None:intergenic 30.0%
!!! GCTTTTGTTTTTTCTGTTCT+TGG + chr1_4:65488651-65488670 Msa0178120:intron 30.0%
!! TATGATATGGTTGGTAGATA+TGG + chr1_4:65488710-65488729 Msa0178120:intron 30.0%
!! ATGATATGGTTGGTAGATAT+GGG + chr1_4:65488711-65488730 Msa0178120:intron 30.0%
! AACACTTTTGTTGCATTTTG+TGG + chr1_4:65488898-65488917 Msa0178120:intron 30.0%
! TTTGTTGCATTTTGTGGTTT+AGG + chr1_4:65488904-65488923 Msa0178120:intron 30.0%
TTATGGTTATGACGAGAAAA+AGG + chr1_4:65488981-65489000 Msa0178120:intron 30.0%
GACATTAAAATGAATGTAGC+TGG + chr1_4:65489040-65489059 Msa0178120:intron 30.0%
CTTACAAAAAGTCAGAATCT+TGG + chr1_4:65489071-65489090 Msa0178120:intron 30.0%
TCACAACCTGACTAATTTAT+AGG - chr1_4:65489262-65489281 None:intergenic 30.0%
! ATAAATTAGTCAGGTTGTGA+AGG + chr1_4:65489262-65489281 Msa0178120:intron 30.0%
! CTAATCAACGGATAAAGTTT+TGG + chr1_4:65489292-65489311 Msa0178120:intron 30.0%
GCATTTCCATTTATATTGCT+TGG + chr1_4:65489627-65489646 Msa0178120:CDS 30.0%
GGAAACAAGATTGATATTGA+TGG + chr1_4:65489648-65489667 Msa0178120:CDS 30.0%
AACAAGATTGATATTGATGG+CGG + chr1_4:65489651-65489670 Msa0178120:CDS 30.0%
ATTAAGGAAACTTAGAAGTG+AGG - chr1_4:65489704-65489723 None:intergenic 30.0%
TGTCTAATTATCTTATGTGC+AGG + chr1_4:65489737-65489756 Msa0178120:intron 30.0%
CAAATTAAAGGTCCATACAA+TGG - chr1_4:65490037-65490056 None:intergenic 30.0%
TACGATCTTGTAAATCTCTA+TGG - chr1_4:65490256-65490275 None:intergenic 30.0%
GATCATATCTCTAATTAACG+TGG + chr1_4:65490541-65490560 Msa0178120:intron 30.0%
!! CTGGAATTCTAAGATAGTAT+TGG - chr1_4:65490715-65490734 None:intergenic 30.0%
ACTATCTTAGAATTCCAGTT+AGG + chr1_4:65490717-65490736 Msa0178120:intron 30.0%
TTGATTGTAACAAAAGGCTT+GGG - chr1_4:65490778-65490797 None:intergenic 30.0%
TTTGATTGTAACAAAAGGCT+TGG - chr1_4:65490779-65490798 None:intergenic 30.0%
CGTAGTTTGATTGTAACAAA+AGG - chr1_4:65490784-65490803 None:intergenic 30.0%
AATCAAACTACGTAGTATGT+AGG + chr1_4:65490792-65490811 Msa0178120:intron 30.0%
! AGTTTTCATTCCCATGAAAT+AGG + chr1_4:65490957-65490976 Msa0178120:intron 30.0%
TCTTCATTATCCCTATGAAA+TGG + chr1_4:65491016-65491035 Msa0178120:intron 30.0%
CTTCATTATCCCTATGAAAT+GGG + chr1_4:65491017-65491036 Msa0178120:intron 30.0%
AATTGGGAGCAAAAGAAAAT+GGG - chr1_4:65491093-65491112 None:intergenic 30.0%
AAATTGGGAGCAAAAGAAAA+TGG - chr1_4:65491094-65491113 None:intergenic 30.0%
!! GACCTATTGGTTCAAAAATT+GGG - chr1_4:65491109-65491128 None:intergenic 30.0%
!! AGACCTATTGGTTCAAAAAT+TGG - chr1_4:65491110-65491129 None:intergenic 30.0%
TTTCATGCATCATATCTGAA+TGG - chr1_4:65491399-65491418 None:intergenic 30.0%
!!! TGTTTTAGCATGCCTATTAT+TGG + chr1_4:65491486-65491505 Msa0178120:intron 30.0%
TTGCTTTCTGTTCCAATAAT+AGG - chr1_4:65491501-65491520 None:intergenic 30.0%
!!! TTTCTTTTTCAGTTGCTAAG+GGG - chr1_4:65491552-65491571 None:intergenic 30.0%
GTATCTGCATCTAAATAGAA+AGG + chr1_4:65491956-65491975 Msa0178120:intron 30.0%
CTAAATAGAAAGGAACTGTA+AGG + chr1_4:65491966-65491985 Msa0178120:intron 30.0%
TCACCATTGATGTTTGTAAT+AGG - chr1_4:65491998-65492017 None:intergenic 30.0%
ATTACAAACATCAATGGTGA+AGG + chr1_4:65491998-65492017 Msa0178120:intron 30.0%
GAGGAGATTCTAAATAAGAT+AGG + chr1_4:65492059-65492078 Msa0178120:intron 30.0%
! AAATTTTCTTCCTTTTCTGG+GGG + chr1_4:65492145-65492164 Msa0178120:intron 30.0%
! ATTTGAAACACAGCATTGAA+GGG - chr1_4:65492377-65492396 None:intergenic 30.0%
! AATTTGAAACACAGCATTGA+AGG - chr1_4:65492378-65492397 None:intergenic 30.0%
!!! ATAGTACTATTGTTTTGGGA+AGG + chr1_4:65492484-65492503 Msa0178120:three_prime_UTR 30.0%
TCTAATTCGTGGTAAATCAA+TGG - chr1_4:65492549-65492568 None:intergenic 30.0%
TGATTTACCACGAATTAGAT+AGG + chr1_4:65492550-65492569 Msa0178120:three_prime_UTR 30.0%
GTCGGTAATCCATTATACAT+AGG + chr1_4:65487709-65487728 Msa0178120:five_prime_UTR 35.0%
CTCGAACTACCTATGTATAA+TGG - chr1_4:65487721-65487740 None:intergenic 35.0%
TCAAAAGGGGAAAAGGAAAA+GGG - chr1_4:65487798-65487817 None:intergenic 35.0%
TGTCAACTTCGAACTCAAAA+GGG - chr1_4:65487812-65487831 None:intergenic 35.0%
ATGTCAACTTCGAACTCAAA+AGG - chr1_4:65487813-65487832 None:intergenic 35.0%
! ATGAATTGTTTAGCGTTGAG+AGG - chr1_4:65487889-65487908 None:intergenic 35.0%
TGCGTGAAATTGAGCTTAAT+TGG - chr1_4:65487915-65487934 None:intergenic 35.0%
! CACCTGATTTGACTTCTTTA+AGG + chr1_4:65488416-65488435 Msa0178120:intron 35.0%
!! CTTCTTTAAGGTTGTGTTTG+AGG + chr1_4:65488428-65488447 Msa0178120:intron 35.0%
TTTAGTTAAGGGTCCACAAA+AGG - chr1_4:65488492-65488511 None:intergenic 35.0%
CAAGTTTAGTCAGCAGTATA+AGG + chr1_4:65488528-65488547 Msa0178120:CDS 35.0%
! TTGAGTGGGTTTGTATGATA+TGG + chr1_4:65488697-65488716 Msa0178120:intron 35.0%
! TTGGAGTTGCGTTTTATAGA+GGG + chr1_4:65488764-65488783 Msa0178120:CDS 35.0%
ACAATCTGATCAGTAAGAGA+TGG - chr1_4:65489475-65489494 None:intergenic 35.0%
TTATGTTCTTCTTGTGACAC+AGG + chr1_4:65489584-65489603 Msa0178120:intron 35.0%
! ACAAGATTGATATTGATGGC+GGG + chr1_4:65489652-65489671 Msa0178120:CDS 35.0%
TTTGCAGATGTCTCAAAGTA+GGG - chr1_4:65489810-65489829 None:intergenic 35.0%
! TTTTGCAGATGTCTCAAAGT+AGG - chr1_4:65489811-65489830 None:intergenic 35.0%
ACTGATATGAATTGAAGCTG+TGG + chr1_4:65489927-65489946 Msa0178120:intron 35.0%
TCTCTGAATTTACAACAGGA+TGG - chr1_4:65490073-65490092 None:intergenic 35.0%
TAACTTGAATAGTGCTCCTT+AGG + chr1_4:65490151-65490170 Msa0178120:intron 35.0%
AACTTGAATAGTGCTCCTTA+GGG + chr1_4:65490152-65490171 Msa0178120:intron 35.0%
! ATTGAGTGTTTTCAGCTTGT+GGG - chr1_4:65490193-65490212 None:intergenic 35.0%
ATAGCAGAAACAATGTGCAA+TGG - chr1_4:65490469-65490488 None:intergenic 35.0%
!!! ATCTAGTTTTCGACGTGAAA+GGG - chr1_4:65490579-65490598 None:intergenic 35.0%
CTTATCCTAGATCTGTCATA+TGG - chr1_4:65490690-65490709 None:intergenic 35.0%
CAGTATCTATTGAAAGTCTG+CGG + chr1_4:65490837-65490856 Msa0178120:intron 35.0%
AAGTGCCTCAAAATTAATGC+TGG + chr1_4:65491042-65491061 Msa0178120:intron 35.0%
! ACTCACCAGCATTAATTTTG+AGG - chr1_4:65491050-65491069 None:intergenic 35.0%
! CTCCCAATTTTTGAACCAAT+AGG + chr1_4:65491104-65491123 Msa0178120:intron 35.0%
TTTGAGTAAGACAGACCTAT+TGG - chr1_4:65491122-65491141 None:intergenic 35.0%
AATAGGTCTGTCTTACTCAA+AGG + chr1_4:65491121-65491140 Msa0178120:intron 35.0%
ATAGGTCTGTCTTACTCAAA+GGG + chr1_4:65491122-65491141 Msa0178120:intron 35.0%
TATAATTTCATCCCAACTCC+AGG - chr1_4:65491294-65491313 None:intergenic 35.0%
GAGTTGGGATGAAATTATAC+AGG + chr1_4:65491295-65491314 Msa0178120:intron 35.0%
GAAGAATGGAAGTTAGTTCA+CGG + chr1_4:65491362-65491381 Msa0178120:intron 35.0%
AAGAATGGAAGTTAGTTCAC+GGG + chr1_4:65491363-65491382 Msa0178120:intron 35.0%
TCTACCTAATGAGTGATTGA+CGG + chr1_4:65491573-65491592 Msa0178120:intron 35.0%
! TCAACTTGCTTTGTTGATGT+GGG - chr1_4:65491643-65491662 None:intergenic 35.0%
! TTCAACTTGCTTTGTTGATG+TGG - chr1_4:65491644-65491663 None:intergenic 35.0%
! TGCAATCCAACTTGTAGTTT+TGG + chr1_4:65491667-65491686 Msa0178120:intron 35.0%
!!! ATCCAACTTGTAGTTTTGGT+TGG + chr1_4:65491671-65491690 Msa0178120:intron 35.0%
!!! TCCAACTTGTAGTTTTGGTT+GGG + chr1_4:65491672-65491691 Msa0178120:intron 35.0%
! GGTTGGGTTAAACAAGTTTT+TGG + chr1_4:65491688-65491707 Msa0178120:intron 35.0%
TTCATAGACTTCACTTGAGA+CGG - chr1_4:65491728-65491747 None:intergenic 35.0%
TTCAAAAGGTTAGAGTGCAT+GGG + chr1_4:65491766-65491785 Msa0178120:intron 35.0%
AAAAGTTGGCAAATGCCATA+TGG + chr1_4:65491789-65491808 Msa0178120:intron 35.0%
AAAGTTGGCAAATGCCATAT+GGG + chr1_4:65491790-65491809 Msa0178120:intron 35.0%
GATGCAGATACCTTTCAAAT+AGG - chr1_4:65491947-65491966 None:intergenic 35.0%
AATCTGTTCTTTCATGTTGC+TGG - chr1_4:65492039-65492058 None:intergenic 35.0%
CAACATGAAAGAACAGATTG+AGG + chr1_4:65492040-65492059 Msa0178120:intron 35.0%
! AATTTTCTTCCTTTTCTGGG+GGG + chr1_4:65492146-65492165 Msa0178120:intron 35.0%
GATGCATGTACTAAGATTTG+AGG - chr1_4:65492172-65492191 None:intergenic 35.0%
!! ATATTTTCAAGGGATTCCTG+AGG + chr1_4:65492275-65492294 Msa0178120:CDS 35.0%
!! TGGAAGTACTGAATAATTGC+AGG + chr1_4:65492347-65492366 Msa0178120:three_prime_UTR 35.0%
ACAATTTACCCACACAATCA+TGG - chr1_4:65492442-65492461 None:intergenic 35.0%
CTATCAAAAAGGGAACATCA+AGG - chr1_4:65492468-65492487 None:intergenic 35.0%
! TTGGTGTTCAAATTGAGATG+TGG + chr1_4:65492595-65492614 Msa0178120:three_prime_UTR 35.0%
TGCTGAGTACATCATTCAAA+TGG - chr1_4:65492638-65492657 None:intergenic 35.0%
CTCAAAAGGGGAAAAGGAAA+AGG - chr1_4:65487799-65487818 None:intergenic 40.0%
TTCGAACTCAAAAGGGGAAA+AGG - chr1_4:65487805-65487824 None:intergenic 40.0%
GTCAACTTCGAACTCAAAAG+GGG - chr1_4:65487811-65487830 None:intergenic 40.0%
TTGCTCAAGGTCATTGTTCT+CGG + chr1_4:65487974-65487993 Msa0178120:CDS 40.0%
!! AAATACGGTGTTGCAGAGAA+AGG - chr1_4:65488027-65488046 None:intergenic 40.0%
! TTCATTTTCATTGCCAGGGT+TGG + chr1_4:65488094-65488113 Msa0178120:intron 40.0%
!! AGGATACTGATTCATCAAGG+AGG - chr1_4:65488125-65488144 None:intergenic 40.0%
!! ACGAGGATACTGATTCATCA+AGG - chr1_4:65488128-65488147 None:intergenic 40.0%
AACAAACGGGTAAGAAACCA+AGG - chr1_4:65488152-65488171 None:intergenic 40.0%
CAAAAGGCTAAATCCCCATA+AGG - chr1_4:65488476-65488495 None:intergenic 40.0%
!! TATGGGGATTTAGCCTTTTG+TGG + chr1_4:65488476-65488495 Msa0178120:intron 40.0%
CAGCAGTATAAGGCAACAAT+TGG + chr1_4:65488538-65488557 Msa0178120:CDS 40.0%
AGACTTGTCACACTACAAGT+GGG + chr1_4:65488598-65488617 Msa0178120:intron 40.0%
GTGGGTTTGTATGATATGGT+TGG + chr1_4:65488701-65488720 Msa0178120:intron 40.0%
CAAGAGAGATTCCAAAGTCT+TGG + chr1_4:65488745-65488764 Msa0178120:CDS 40.0%
AAAACGCAACTCCAAGACTT+TGG - chr1_4:65488759-65488778 None:intergenic 40.0%
! CTTGGAGTTGCGTTTTATAG+AGG + chr1_4:65488763-65488782 Msa0178120:CDS 40.0%
! TGGAGTTGCGTTTTATAGAG+GGG + chr1_4:65488765-65488784 Msa0178120:CDS 40.0%
CGTTTGATTCACTTGACAAC+TGG + chr1_4:65488830-65488849 Msa0178120:CDS 40.0%
ACTTGTAGTTGAGACTTGAG+AGG + chr1_4:65489205-65489224 Msa0178120:intron 40.0%
CTTGTAGTTGAGACTTGAGA+GGG + chr1_4:65489206-65489225 Msa0178120:intron 40.0%
AGGGACGCAATGTGATAATT+TGG + chr1_4:65489225-65489244 Msa0178120:intron 40.0%
! AATTAGTCAGGTTGTGAAGG+AGG + chr1_4:65489265-65489284 Msa0178120:intron 40.0%
! ATTAGTCAGGTTGTGAAGGA+GGG + chr1_4:65489266-65489285 Msa0178120:intron 40.0%
!! GAAGGAGGGTATCTAATCAA+CGG + chr1_4:65489280-65489299 Msa0178120:intron 40.0%
TACATCTGCCAATGCACAAA+TGG - chr1_4:65489319-65489338 None:intergenic 40.0%
AGAACACTGCTGATGTTTGA+GGG - chr1_4:65489344-65489363 None:intergenic 40.0%
TAGAACACTGCTGATGTTTG+AGG - chr1_4:65489345-65489364 None:intergenic 40.0%
! AGAGATGGAGCATTATCACA+AGG - chr1_4:65489460-65489479 None:intergenic 40.0%
!! TGATTAGCCTTCCAACTTAC+TGG + chr1_4:65489536-65489555 Msa0178120:intron 40.0%
AATGGAAATGCCCTTGTATC+AGG - chr1_4:65489618-65489637 None:intergenic 40.0%
! GGTTTCTGAGAAGAAAGCAA+AGG + chr1_4:65489758-65489777 Msa0178120:intron 40.0%
!! CTTTGAGACATCTGCAAAAG+AGG + chr1_4:65489812-65489831 Msa0178120:CDS 40.0%
! CATTGAGTGTTTTCAGCTTG+TGG - chr1_4:65490194-65490213 None:intergenic 40.0%
AGTGAACATATCAGTGACTG+AGG - chr1_4:65490233-65490252 None:intergenic 40.0%
!!! GATCTAGTTTTCGACGTGAA+AGG - chr1_4:65490580-65490599 None:intergenic 40.0%
!! CACATGAGGGTGTTGTAATT+GGG - chr1_4:65490629-65490648 None:intergenic 40.0%
!! ACACATGAGGGTGTTGTAAT+TGG - chr1_4:65490630-65490649 None:intergenic 40.0%
ATTACAACACCCTCATGTGT+AGG + chr1_4:65490630-65490649 Msa0178120:intron 40.0%
ATGTCTAGTCCTACACATGA+GGG - chr1_4:65490642-65490661 None:intergenic 40.0%
TGTGACCATATGACAGATCT+AGG + chr1_4:65490682-65490701 Msa0178120:intron 40.0%
ACTACGTAGTATGTAGGAAG+AGG + chr1_4:65490798-65490817 Msa0178120:intron 40.0%
ATTGAAAGTCTGCGGTAATG+TGG + chr1_4:65490845-65490864 Msa0178120:intron 40.0%
TTGAAAGTCTGCGGTAATGT+GGG + chr1_4:65490846-65490865 Msa0178120:intron 40.0%
AGGCACTTGACCTATTTCAT+GGG - chr1_4:65490970-65490989 None:intergenic 40.0%
GGCACTTAACCCATTTCATA+GGG - chr1_4:65491029-65491048 None:intergenic 40.0%
AGGCACTTAACCCATTTCAT+AGG - chr1_4:65491030-65491049 None:intergenic 40.0%
GGGAAAATGTGACAAAAGCA+AGG - chr1_4:65491073-65491092 None:intergenic 40.0%
AAGACAATAGATGCTTAGCC+TGG + chr1_4:65491273-65491292 Msa0178120:intron 40.0%
TTGGAACAGAAAGCAAGCTT+TGG + chr1_4:65491505-65491524 Msa0178120:intron 40.0%
TGGAACAGAAAGCAAGCTTT+GGG + chr1_4:65491506-65491525 Msa0178120:intron 40.0%
TATAGCATGCCTATTGTGGT+AGG - chr1_4:65491603-65491622 None:intergenic 40.0%
CTAGTATAGCATGCCTATTG+TGG - chr1_4:65491607-65491626 None:intergenic 40.0%
CACAATAGGCATGCTATACT+AGG + chr1_4:65491605-65491624 Msa0178120:intron 40.0%
ATAGGCATGCTATACTAGGA+TGG + chr1_4:65491609-65491628 Msa0178120:intron 40.0%
ACCCAACCAAAACTACAAGT+TGG - chr1_4:65491676-65491695 None:intergenic 40.0%
GTTCAAAAGGTTAGAGTGCA+TGG + chr1_4:65491765-65491784 Msa0178120:intron 40.0%
TTAGAGTGCATGGGAAAAGT+TGG + chr1_4:65491775-65491794 Msa0178120:intron 40.0%
AAGTTGGCAAATGCCATATG+GGG + chr1_4:65491791-65491810 Msa0178120:intron 40.0%
ACTGTATGCCATGATTGTGT+GGG + chr1_4:65492431-65492450 Msa0178120:three_prime_UTR 40.0%
TTGAGAATGTTGCACTCCTA+GGG + chr1_4:65492513-65492532 Msa0178120:three_prime_UTR 40.0%
! CAATGGAACATGTTTTCCCT+AGG - chr1_4:65492532-65492551 None:intergenic 40.0%
CTTCAAGCCTATCTAATTCG+TGG - chr1_4:65492560-65492579 None:intergenic 40.0%
CAGTGCTTCACATAGTTGAA+TGG + chr1_4:65492672-65492691 Msa0178120:three_prime_UTR 40.0%
ATGACATAGCTGGTTACGGT+GGG - chr1_4:65487940-65487959 None:intergenic 45.0%
AATGACATAGCTGGTTACGG+TGG - chr1_4:65487941-65487960 None:intergenic 45.0%
CGCAATGACATAGCTGGTTA+CGG - chr1_4:65487944-65487963 None:intergenic 45.0%
GAGAACAATGACCTTGAGCA+AGG - chr1_4:65487975-65487994 None:intergenic 45.0%
TGCAGAGAAAGGAGGGAAAA+AGG - chr1_4:65488016-65488035 None:intergenic 45.0%
GAATCAGTATCCTCGTTCCT+TGG + chr1_4:65488132-65488151 Msa0178120:intron 45.0%
CAGACTTGTCACACTACAAG+TGG + chr1_4:65488597-65488616 Msa0178120:intron 45.0%
! AGTTGCGTTTTATAGAGGGG+CGG + chr1_4:65488768-65488787 Msa0178120:CDS 45.0%
CGTATGATGTGAACGTCATG+AGG + chr1_4:65488806-65488825 Msa0178120:CDS 45.0%
!! GTTTTGGGCCATTTGTGCAT+TGG + chr1_4:65489308-65489327 Msa0178120:intron 45.0%
! GACAAGTCCAGTAAGTTGGA+AGG - chr1_4:65489546-65489565 None:intergenic 45.0%
GTGAGACAAGTCCAGTAAGT+TGG - chr1_4:65489550-65489569 None:intergenic 45.0%
GAAATGCCCTTGTATCAGGA+GGG - chr1_4:65489614-65489633 None:intergenic 45.0%
CTGAGAAGAAAGCAAAGGAC+TGG + chr1_4:65489763-65489782 Msa0178120:CDS 45.0%
! AAGGACTGGTGTGCTTCAAA+AGG + chr1_4:65489777-65489796 Msa0178120:CDS 45.0%
! AGGACTGGTGTGCTTCAAAA+GGG + chr1_4:65489778-65489797 Msa0178120:CDS 45.0%
GATGTCTAGTCCTACACATG+AGG - chr1_4:65490643-65490662 None:intergenic 45.0%
CGTAGTATGTAGGAAGAGGA+TGG + chr1_4:65490802-65490821 Msa0178120:intron 45.0%
! GAGGCACTTGACCTATTTCA+TGG - chr1_4:65490971-65490990 None:intergenic 45.0%
!!! CACCAAACCTTTTGAAGCAG+CGG + chr1_4:65491219-65491238 Msa0178120:intron 45.0%
ATCCGCTGCTTCAAAAGGTT+TGG - chr1_4:65491224-65491243 None:intergenic 45.0%
TGTGAATCCGCTGCTTCAAA+AGG - chr1_4:65491229-65491248 None:intergenic 45.0%
GCGGATTCACATGAAAATGC+TGG + chr1_4:65491238-65491257 Msa0178120:intron 45.0%
ATAGATGCTTAGCCTGGAGT+TGG + chr1_4:65491279-65491298 Msa0178120:intron 45.0%
TAGATGCTTAGCCTGGAGTT+GGG + chr1_4:65491280-65491299 Msa0178120:intron 45.0%
GGAACAGAAAGCAAGCTTTG+GGG + chr1_4:65491507-65491526 Msa0178120:intron 45.0%
! GAACAGAAAGCAAGCTTTGG+GGG + chr1_4:65491508-65491527 Msa0178120:intron 45.0%
!! AACAGAAAGCAAGCTTTGGG+GGG + chr1_4:65491509-65491528 Msa0178120:intron 45.0%
CAGTTGCTAAGGGGAAAGTA+AGG - chr1_4:65491543-65491562 None:intergenic 45.0%
TTGGCCGTCAATCACTCATT+AGG - chr1_4:65491580-65491599 None:intergenic 45.0%
CAAATGCCATATGGGGACTT+GGG + chr1_4:65491798-65491817 Msa0178120:intron 45.0%
AAATGCCATATGGGGACTTG+GGG + chr1_4:65491799-65491818 Msa0178120:intron 45.0%
GGTGAAGGAGTTCTCTAAAC+TGG + chr1_4:65492013-65492032 Msa0178120:intron 45.0%
!! TTTTCAAGGGATTCCTGAGG+CGG + chr1_4:65492278-65492297 Msa0178120:CDS 45.0%
CACTGTATGCCATGATTGTG+TGG + chr1_4:65492430-65492449 Msa0178120:three_prime_UTR 45.0%
CTTGAGAATGTTGCACTCCT+AGG + chr1_4:65492512-65492531 Msa0178120:three_prime_UTR 45.0%
TGACATAGCTGGTTACGGTG+GGG - chr1_4:65487939-65487958 None:intergenic 50.0%
GTCATTGTTCTCGGCGATAG+CGG + chr1_4:65487983-65488002 Msa0178120:CDS 50.0%
TCATTGTTCTCGGCGATAGC+GGG + chr1_4:65487984-65488003 Msa0178120:CDS 50.0%
!! ACGGTGTTGCAGAGAAAGGA+GGG - chr1_4:65488023-65488042 None:intergenic 50.0%
!! TACGGTGTTGCAGAGAAAGG+AGG - chr1_4:65488024-65488043 None:intergenic 50.0%
! CAAGGAGGTTTTTCCAACCC+TGG - chr1_4:65488110-65488129 None:intergenic 50.0%
GGGTAAGAAACCAAGGAACG+AGG - chr1_4:65488145-65488164 None:intergenic 50.0%
TGGTAGATATGGGACACTGC+TGG + chr1_4:65488721-65488740 Msa0178120:intron 50.0%
TTCACTTGACAACTGGCACG+AGG + chr1_4:65488837-65488856 Msa0178120:CDS 50.0%
GCACGAGGAGTTTCTCAAAC+AGG + chr1_4:65488852-65488871 Msa0178120:CDS 50.0%
AGGCAAACCCTCCTGATACA+AGG + chr1_4:65489604-65489623 Msa0178120:intron 50.0%
GGCAAACCCTCCTGATACAA+GGG + chr1_4:65489605-65489624 Msa0178120:intron 50.0%
GGAAATGCCCTTGTATCAGG+AGG - chr1_4:65489615-65489634 None:intergenic 50.0%
GTGTATTGCAAAGACTGCCC+TGG + chr1_4:65489860-65489879 Msa0178120:CDS 50.0%
CATGTCCTGTTCACGCTCAT+TGG - chr1_4:65489886-65489905 None:intergenic 50.0%
CTGAACAGGGATCTTCCCTA+AGG - chr1_4:65490170-65490189 None:intergenic 50.0%
! TTCAGCTTGTGGGCTGAACA+GGG - chr1_4:65490183-65490202 None:intergenic 50.0%
! TTTCAGCTTGTGGGCTGAAC+AGG - chr1_4:65490184-65490203 None:intergenic 50.0%
! TCTAGAACGTGATCGAACGC+AGG + chr1_4:65490600-65490619 Msa0178120:intron 50.0%
AGGACTAGACATCTCGAGTG+TGG + chr1_4:65490650-65490669 Msa0178120:intron 50.0%
TCAGCCTGTAGCTCAAGATG+CGG + chr1_4:65490746-65490765 Msa0178120:intron 50.0%
TCTACGTCAACCTAGCCCAA+AGG + chr1_4:65491419-65491438 Msa0178120:intron 50.0%
TCATCGACCAACCCTCCTTT+GGG - chr1_4:65491437-65491456 None:intergenic 50.0%
TTCATCGACCAACCCTCCTT+TGG - chr1_4:65491438-65491457 None:intergenic 50.0%
GCATGCCTATTGTGGTAGGT+TGG - chr1_4:65491599-65491618 None:intergenic 50.0%
GCAAATGCCATATGGGGACT+TGG + chr1_4:65491797-65491816 Msa0178120:intron 50.0%
GTTCCAGAGAGTGAGCAAAG+TGG + chr1_4:65492300-65492319 Msa0178120:CDS 50.0%
GGTGGATGTGCATGCTGATA+TGG + chr1_4:65492327-65492346 Msa0178120:exon 50.0%
CGTCTGCGCAATGACATAGC+TGG - chr1_4:65487950-65487969 None:intergenic 55.0%
!! TGATGGCGGGAATAGTCGAG+TGG + chr1_4:65489665-65489684 Msa0178120:CDS 55.0%
CTGTTCACGCTCATTGGCCA+GGG - chr1_4:65489880-65489899 None:intergenic 55.0%
CAGGCTGAGCAAGACCTAAC+TGG - chr1_4:65490734-65490753 None:intergenic 55.0%
CAGCCTGTAGCTCAAGATGC+GGG + chr1_4:65490747-65490766 Msa0178120:intron 55.0%
AGCCTGTAGCTCAAGATGCG+GGG + chr1_4:65490748-65490767 Msa0178120:intron 55.0%
ACGTCAACCTAGCCCAAAGG+AGG + chr1_4:65491422-65491441 Msa0178120:intron 55.0%
CGTCAACCTAGCCCAAAGGA+GGG + chr1_4:65491423-65491442 Msa0178120:intron 55.0%
AACCTAGCCCAAAGGAGGGT+TGG + chr1_4:65491427-65491446 Msa0178120:intron 55.0%
!! GAAAGCAAGCTTTGGGGGGT+TGG + chr1_4:65491513-65491532 Msa0178120:intron 55.0%
GACGGCCAACCTACCACAAT+AGG + chr1_4:65491591-65491610 Msa0178120:intron 55.0%
! GATTTGAGGCCCCCCAGAAA+AGG - chr1_4:65492158-65492177 None:intergenic 55.0%
CCACCACTTTGCTCACTCTC+TGG - chr1_4:65492306-65492325 None:intergenic 55.0%
CCAGAGAGTGAGCAAAGTGG+TGG + chr1_4:65492303-65492322 Msa0178120:CDS 55.0%
GAGAGTGAGCAAAGTGGTGG+TGG + chr1_4:65492306-65492325 Msa0178120:CDS 55.0%
!! AGTGAGCAAAGTGGTGGTGG+TGG + chr1_4:65492309-65492328 Msa0178120:CDS 55.0%
GCGCAGACGAACCTTGCTCA+AGG + chr1_4:65487961-65487980 Msa0178120:CDS 60.0%
CCTGTTCACGCTCATTGGCC+AGG - chr1_4:65489881-65489900 None:intergenic 60.0%
CCTGGCCAATGAGCGTGAAC+AGG + chr1_4:65489878-65489897 Msa0178120:CDS 60.0%
GCCTGTAGCTCAAGATGCGG+GGG + chr1_4:65490749-65490768 Msa0178120:intron 60.0%
ACCCCCGCATCTTGAGCTAC+AGG - chr1_4:65490753-65490772 None:intergenic 60.0%
GACCAACCCTCCTTTGGGCT+AGG - chr1_4:65491432-65491451 None:intergenic 60.0%
TGCCATATGGGGACTTGGGG+AGG + chr1_4:65491802-65491821 Msa0178120:intron 60.0%
AGCCTCCCCAAGTCCCCATA+TGG - chr1_4:65491807-65491826 None:intergenic 60.0%
!! TCACTCTCTGGAACCGCCTC+AGG - chr1_4:65492294-65492313 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 65487589 65492738 65487589 ID=Msa0178120;Name=Msa0178120
chr1_4 mRNA 65487589 65492738 65487589 ID=Msa0178120-mRNA-1;Parent=Msa0178120;Name=Msa0178120-mRNA-1;_AED=0.16;_eAED=0.16;_QI=364|0.8|1|1|0.8|1|6|394|198
chr1_4 exon 65487589 65488005 65487589 ID=Msa0178120-mRNA-1:exon:21342;Parent=Msa0178120-mRNA-1
chr1_4 exon 65488516 65488615 65488516 ID=Msa0178120-mRNA-1:exon:21343;Parent=Msa0178120-mRNA-1
chr1_4 exon 65488727 65488873 65488727 ID=Msa0178120-mRNA-1:exon:21344;Parent=Msa0178120-mRNA-1
chr1_4 exon 65489606 65489686 65489606 ID=Msa0178120-mRNA-1:exon:21345;Parent=Msa0178120-mRNA-1
chr1_4 exon 65489759 65489904 65489759 ID=Msa0178120-mRNA-1:exon:21346;Parent=Msa0178120-mRNA-1
chr1_4 exon 65492275 65492738 65492275 ID=Msa0178120-mRNA-1:exon:21347;Parent=Msa0178120-mRNA-1
chr1_4 five_prime_UTR 65487589 65487952 65487589 ID=Msa0178120-mRNA-1:five_prime_utr;Parent=Msa0178120-mRNA-1
chr1_4 CDS 65487953 65488005 65487953 ID=Msa0178120-mRNA-1:cds;Parent=Msa0178120-mRNA-1
chr1_4 CDS 65488516 65488615 65488516 ID=Msa0178120-mRNA-1:cds;Parent=Msa0178120-mRNA-1
chr1_4 CDS 65488727 65488873 65488727 ID=Msa0178120-mRNA-1:cds;Parent=Msa0178120-mRNA-1
chr1_4 CDS 65489606 65489686 65489606 ID=Msa0178120-mRNA-1:cds;Parent=Msa0178120-mRNA-1
chr1_4 CDS 65489759 65489904 65489759 ID=Msa0178120-mRNA-1:cds;Parent=Msa0178120-mRNA-1
chr1_4 CDS 65492275 65492344 65492275 ID=Msa0178120-mRNA-1:cds;Parent=Msa0178120-mRNA-1
chr1_4 three_prime_UTR 65492345 65492738 65492345 ID=Msa0178120-mRNA-1:three_prime_utr;Parent=Msa0178120-mRNA-1
Gene Sequence

>Msa0178120

ATGTCATTGCGCAGACGAACCTTGCTCAAGGTCATTGTTCTCGGCGATAGCGGATATGTGCACAACAAGTTTAGTCAGCAGTATAAGGCAACAATTGGTGCTGATTTTGTCACTAAAGAACTTCAAATTGACGACAGACTTGTCACACTACAAATATGGGACACTGCTGGACAAGAGAGATTCCAAAGTCTTGGAGTTGCGTTTTATAGAGGGGCGGATTGCTGTGTTCTTGCGTATGATGTGAACGTCATGAGGTCGTTTGATTCACTTGACAACTGGCACGAGGAGTTTCTCAAACAGGCAAACCCTCCTGATACAAGGGCATTTCCATTTATATTGCTTGGAAACAAGATTGATATTGATGGCGGGAATAGTCGAGTGGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCTTCAAAAGGGAATATTCCCTACTTTGAGACATCTGCAAAAGAGGATTACAATGTTGATGCTGCATTCTTGTGTATTGCAAAGACTGCCCTGGCCAATGAGCGTGAACAGGACATATATTTTCAAGGGATTCCTGAGGCGGTTCCAGAGAGTGAGCAAAGTGGTGGTGGTGGATGTGCATGCTGA
Protein sequence

>Msa0178120

MSLRRRTLLKVIVLGDSGYVHNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMRSFDSLDNWHEEFLKQANPPDTRAFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANEREQDIYFQGIPEAVPESEQSGGGGCAC*