Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142410 | XP_003630218.2 | 95.738 | 305 | 11 | 1 | 1 | 305 | 1 | 303 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142410 | sp|Q9ASQ2|MAMYB_ARATH | 51.553 | 322 | 119 | 10 | 1 | 301 | 1 | 306 | 1.57e-81 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142410 | A0A0C3Y601 | 95.738 | 305 | 11 | 1 | 1 | 305 | 1 | 303 | 0.0 | 587 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0142410 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0142410 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0012940 | Msa0142410 | 0.829379 | 5.320722e-55 | -8.615850e-47 |
| Msa0016540 | Msa0142410 | 0.824065 | 9.875534e-54 | -8.615850e-47 |
| Msa0029630 | Msa0142410 | 0.838268 | 3.180869e-57 | -8.615850e-47 |
| Msa0032020 | Msa0142410 | 0.801421 | 9.077311e-49 | -8.615850e-47 |
| Msa0033880 | Msa0142410 | 0.845023 | 5.260111e-59 | -8.615850e-47 |
| Msa0037410 | Msa0142410 | 0.800105 | 1.684376e-48 | -8.615850e-47 |
| Msa0041690 | Msa0142410 | 0.823296 | 1.495339e-53 | -8.615850e-47 |
| Msa0047640 | Msa0142410 | 0.808654 | 2.784403e-50 | -8.615850e-47 |
| Msa0077900 | Msa0142410 | 0.818974 | 1.480871e-52 | -8.615850e-47 |
| Msa0079920 | Msa0142410 | 0.824380 | 8.330506e-54 | -8.615850e-47 |
| Msa0080730 | Msa0142410 | 0.807102 | 5.956303e-50 | -8.615850e-47 |
| Msa0093850 | Msa0142410 | 0.816172 | 6.341282e-52 | -8.615850e-47 |
| Msa0097950 | Msa0142410 | 0.801114 | 1.048885e-48 | -8.615850e-47 |
| Msa0105520 | Msa0142410 | 0.800890 | 1.165446e-48 | -8.615850e-47 |
| Msa0106620 | Msa0142410 | 0.815047 | 1.128925e-51 | -8.615850e-47 |
| Msa0106710 | Msa0142410 | 0.805978 | 1.028072e-49 | -8.615850e-47 |
| Msa0115370 | Msa0142410 | 0.804906 | 1.724778e-49 | -8.615850e-47 |
| Msa0119900 | Msa0142410 | 0.803940 | 2.742015e-49 | -8.615850e-47 |
| Msa0123510 | Msa0142410 | 0.818355 | 2.047059e-52 | -8.615850e-47 |
| Msa0125450 | Msa0142410 | 0.827475 | 1.533182e-54 | -8.615850e-47 |
| Msa0125540 | Msa0142410 | 0.807734 | 4.374065e-50 | -8.615850e-47 |
| Msa0127040 | Msa0142410 | 0.819473 | 1.140117e-52 | -8.615850e-47 |
| Msa0127850 | Msa0142410 | 0.848165 | 7.292721e-60 | -8.615850e-47 |
| Msa0136120 | Msa0142410 | 0.817253 | 3.629804e-52 | -8.615850e-47 |
| Msa0138360 | Msa0142410 | 0.813517 | 2.458917e-51 | -8.615850e-47 |
| Msa0141400 | Msa0142410 | 0.814210 | 1.730180e-51 | -8.615850e-47 |
| Msa0142110 | Msa0142410 | 0.836186 | 1.084393e-56 | -8.615850e-47 |
| Msa0142410 | Msa0144420 | 0.804752 | 1.857428e-49 | -8.615850e-47 |
| Msa0142410 | Msa0144430 | 0.818231 | 2.183105e-52 | -8.615850e-47 |
| Msa0142410 | Msa0146080 | 0.815473 | 9.079395e-52 | -8.615850e-47 |
| Msa0142410 | Msa0147980 | 0.829190 | 5.913192e-55 | -8.615850e-47 |
| Msa0142410 | Msa0149440 | 0.807949 | 3.936361e-50 | -8.615850e-47 |
| Msa0142410 | Msa0152870 | 0.800812 | 1.209172e-48 | -8.615850e-47 |
| Msa0142410 | Msa0166750 | 0.806185 | 9.301593e-50 | -8.615850e-47 |
| Msa0142410 | Msa0168090 | 0.860756 | 1.654751e-63 | -8.615850e-47 |
| Msa0142410 | Msa0169610 | 0.822599 | 2.173013e-53 | -8.615850e-47 |
| Msa0142410 | Msa0174000 | 0.847109 | 1.423167e-59 | -8.615850e-47 |
| Msa0142410 | Msa0178120 | 0.823166 | 1.603346e-53 | -8.615850e-47 |
| Msa0142410 | Msa0179030 | 0.825549 | 4.411897e-54 | -8.615850e-47 |
| Msa0142410 | Msa0199420 | 0.832590 | 8.667586e-56 | -8.615850e-47 |
| Msa0142410 | Msa0209140 | 0.822239 | 2.634241e-53 | -8.615850e-47 |
| Msa0142410 | Msa0223170 | 0.832807 | 7.656016e-56 | -8.615850e-47 |
| Msa0142410 | Msa0223330 | 0.802501 | 5.445428e-49 | -8.615850e-47 |
| Msa0142410 | Msa0230520 | 0.810745 | 9.891489e-51 | -8.615850e-47 |
| Msa0142410 | Msa0231100 | 0.815569 | 8.644709e-52 | -8.615850e-47 |
| Msa0142410 | Msa0236620 | 0.828178 | 1.038767e-54 | -8.615850e-47 |
| Msa0142410 | Msa0241830 | 0.870708 | 1.189782e-66 | -8.615850e-47 |
| Msa0142410 | Msa0244970 | 0.845865 | 3.110210e-59 | -8.615850e-47 |
| Msa0142410 | Msa0244980 | 0.862202 | 5.990391e-64 | -8.615850e-47 |
| Msa0142410 | Msa0245430 | 0.821182 | 4.624892e-53 | -8.615850e-47 |
| Msa0142410 | Msa0245580 | 0.854705 | 1.030020e-61 | -8.615850e-47 |
| Msa0142410 | Msa0249580 | 0.823890 | 1.085712e-53 | -8.615850e-47 |
| Msa0142410 | Msa0261170 | 0.830692 | 2.544397e-55 | -8.615850e-47 |
| Msa0142410 | Msa0262480 | 0.841835 | 3.734194e-58 | -8.615850e-47 |
| Msa0142410 | Msa0269470 | 0.802756 | 4.822732e-49 | -8.615850e-47 |
| Msa0142410 | Msa0270210 | 0.841162 | 5.615369e-58 | -8.615850e-47 |
| Msa0142410 | Msa0275360 | 0.818046 | 2.403843e-52 | -8.615850e-47 |
| Msa0142410 | Msa0279850 | 0.844614 | 6.776839e-59 | -8.615850e-47 |
| Msa0142410 | Msa0283420 | 0.839966 | 1.154936e-57 | -8.615850e-47 |
| Msa0142410 | Msa0295250 | 0.813110 | 3.020619e-51 | -8.615850e-47 |
| Msa0142410 | Msa0296250 | 0.861267 | 1.156755e-63 | -8.615850e-47 |
| Msa0142410 | Msa0296790 | 0.812741 | 3.638818e-51 | -8.615850e-47 |
| Msa0142410 | Msa0300280 | 0.827093 | 1.892844e-54 | -8.615850e-47 |
| Msa0142410 | Msa0300350 | 0.826658 | 2.403547e-54 | -8.615850e-47 |
| Msa0142410 | Msa0301520 | 0.822726 | 2.029872e-53 | -8.615850e-47 |
| Msa0142410 | Msa0305310 | 0.802718 | 4.912622e-49 | -8.615850e-47 |
| Msa0142410 | Msa0307850 | 0.805643 | 1.208961e-49 | -8.615850e-47 |
| Msa0142410 | Msa0320590 | 0.818112 | 2.323502e-52 | -8.615850e-47 |
| Msa0142410 | Msa0321690 | 0.833318 | 5.711914e-56 | -8.615850e-47 |
| Msa0142410 | Msa0322900 | 0.867355 | 1.454553e-65 | -8.615850e-47 |
| Msa0142410 | Msa0332640 | 0.820163 | 7.928840e-53 | -8.615850e-47 |
| Msa0142410 | Msa0341690 | 0.809353 | 1.972850e-50 | -8.615850e-47 |
| Msa0142410 | Msa0363060 | 0.849121 | 3.962631e-60 | -8.615850e-47 |
| Msa0142410 | Msa0363640 | 0.810638 | 1.043433e-50 | -8.615850e-47 |
| Msa0142410 | Msa0376280 | 0.810716 | 1.003649e-50 | -8.615850e-47 |
| Msa0142410 | Msa0382370 | 0.805095 | 1.574805e-49 | -8.615850e-47 |
| Msa0142410 | Msa0384670 | 0.843573 | 1.289583e-58 | -8.615850e-47 |
| Msa0142410 | Msa0419720 | 0.810228 | 1.279624e-50 | -8.615850e-47 |
| Msa0142410 | Msa0434570 | 0.844321 | 8.127547e-59 | -8.615850e-47 |
| Msa0142410 | Msa0434770 | 0.846871 | 1.653640e-59 | -8.615850e-47 |
| Msa0142410 | Msa0436200 | 0.807966 | 3.904914e-50 | -8.615850e-47 |
| Msa0142410 | Msa0437020 | 0.807677 | 4.497029e-50 | -8.615850e-47 |
| Msa0142410 | Msa0443390 | 0.818690 | 1.718599e-52 | -8.615850e-47 |
| Msa0142410 | Msa0443430 | 0.802125 | 6.505967e-49 | -8.615850e-47 |
| Msa0142410 | Msa0451150 | 0.806366 | 8.516500e-50 | -8.615850e-47 |
| Msa0142410 | Msa0478580 | 0.837520 | 4.953457e-57 | -8.615850e-47 |
| Msa0142410 | Msa0485240 | 0.826191 | 3.105882e-54 | -8.615850e-47 |
| Msa0142410 | Msa0491000 | 0.820969 | 5.177613e-53 | -8.615850e-47 |
| Msa0142410 | Msa0509120 | 0.809267 | 2.059356e-50 | -8.615850e-47 |
| Msa0142410 | Msa0511770 | 0.838398 | 2.945499e-57 | -8.615850e-47 |
| Msa0142410 | Msa0518030 | 0.832551 | 8.860372e-56 | -8.615850e-47 |
| Msa0142410 | Msa0519150 | 0.808210 | 3.464073e-50 | -8.615850e-47 |
| Msa0142410 | Msa0524590 | 0.803666 | 3.126726e-49 | -8.615850e-47 |
| Msa0142410 | Msa0531250 | 0.825851 | 3.741099e-54 | -8.615850e-47 |
| Msa0142410 | Msa0531650 | 0.800204 | 1.608641e-48 | -8.615850e-47 |
| Msa0142410 | Msa0534750 | 0.821180 | 4.631079e-53 | -8.615850e-47 |
| Msa0142410 | Msa0540550 | 0.804173 | 2.452536e-49 | -8.615850e-47 |
| Msa0142410 | Msa0547990 | 0.865535 | 5.502599e-65 | -8.615850e-47 |
| Msa0142410 | Msa0550540 | 0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0142410 | Msa0550570 | 0.812608 | 3.891481e-51 | -8.615850e-47 |
| Msa0142410 | Msa0560500 | 0.811423 | 7.054438e-51 | -8.615850e-47 |
| Msa0142410 | Msa0581110 | 0.831030 | 2.102889e-55 | -8.615850e-47 |
| Msa0142410 | Msa0583500 | 0.807308 | 5.385482e-50 | -8.615850e-47 |
| Msa0142410 | Msa0593700 | 0.850257 | 1.908844e-60 | -8.615850e-47 |
| Msa0142410 | Msa0597770 | 0.820991 | 5.118355e-53 | -8.615850e-47 |
| Msa0142410 | Msa0606810 | 0.801095 | 1.058445e-48 | -8.615850e-47 |
| Msa0142410 | Msa0610090 | 0.840017 | 1.120233e-57 | -8.615850e-47 |
| Msa0142410 | Msa0615580 | 0.825038 | 5.829677e-54 | -8.615850e-47 |
| Msa0142410 | Msa0619420 | 0.814083 | 1.845965e-51 | -8.615850e-47 |
| Msa0142410 | Msa0619860 | 0.800180 | 1.626773e-48 | -8.615850e-47 |
| Msa0142410 | Msa0628420 | 0.821007 | 5.074943e-53 | -8.615850e-47 |
| Msa0142410 | Msa0633570 | 0.847165 | 1.374246e-59 | -8.615850e-47 |
| Msa0142410 | Msa0642970 | 0.804139 | 2.492797e-49 | -8.615850e-47 |
| Msa0142410 | Msa0644030 | 0.867326 | 1.485915e-65 | -8.615850e-47 |
| Msa0142410 | Msa0656810 | 0.850378 | 1.765447e-60 | -8.615850e-47 |
| Msa0142410 | Msa0658480 | 0.849192 | 3.785021e-60 | -8.615850e-47 |
| Msa0142410 | Msa0659550 | 0.824278 | 8.803509e-54 | -8.615850e-47 |
| Msa0142410 | Msa0662630 | 0.812717 | 3.684356e-51 | -8.615850e-47 |
| Msa0142410 | Msa0662890 | 0.823545 | 1.307250e-53 | -8.615850e-47 |
| Msa0142410 | Msa0666230 | 0.822582 | 2.193625e-53 | -8.615850e-47 |
| Msa0142410 | Msa0669180 | 0.810825 | 9.509349e-51 | -8.615850e-47 |
| Msa0142410 | Msa0687230 | 0.811694 | 6.160403e-51 | -8.615850e-47 |
| Msa0142410 | Msa0689440 | 0.809425 | 1.904105e-50 | -8.615850e-47 |
| Msa0142410 | Msa0698100 | 0.818374 | 2.026989e-52 | -8.615850e-47 |
| Msa0142410 | Msa0712560 | 0.813171 | 2.929756e-51 | -8.615850e-47 |
| Msa0142410 | Msa0713340 | 0.804971 | 1.671549e-49 | -8.615850e-47 |
| Msa0142410 | Msa0716410 | 0.802516 | 5.406505e-49 | -8.615850e-47 |
| Msa0142410 | Msa0743530 | 0.809289 | 2.036434e-50 | -8.615850e-47 |
| Msa0142410 | Msa0744100 | 0.817134 | 3.859280e-52 | -8.615850e-47 |
| Msa0142410 | Msa0752700 | 0.801229 | 9.937627e-49 | -8.615850e-47 |
| Msa0142410 | Msa0754930 | 0.801587 | 8.391959e-49 | -8.615850e-47 |
| Msa0142410 | Msa0785130 | 0.802957 | 4.384612e-49 | -8.615850e-47 |
| Msa0142410 | Msa0794050 | 0.808535 | 2.953140e-50 | -8.615850e-47 |
| Msa0142410 | Msa0800370 | 0.802017 | 6.848306e-49 | -8.615850e-47 |
| Msa0142410 | Msa0818770 | 0.818336 | 2.067326e-52 | -8.615850e-47 |
| Msa0142410 | Msa0819540 | 0.801069 | 1.071516e-48 | -8.615850e-47 |
| Msa0142410 | Msa0822170 | 0.813854 | 2.073565e-51 | -8.615850e-47 |
| Msa0142410 | Msa0822180 | 0.805738 | 1.154994e-49 | -8.615850e-47 |
| Msa0142410 | Msa0825270 | 0.830481 | 2.866663e-55 | -8.615850e-47 |
| Msa0142410 | Msa0826510 | 0.825095 | 5.648846e-54 | -8.615850e-47 |
| Msa0142410 | Msa0831100 | 0.809389 | 1.938779e-50 | -8.615850e-47 |
| Msa0142410 | Msa0833190 | -0.816370 | 5.727442e-52 | -8.615850e-47 |
| Msa0142410 | Msa0839450 | 0.801751 | 7.765459e-49 | -8.615850e-47 |
| Msa0142410 | Msa0855110 | 0.800012 | 1.759479e-48 | -8.615850e-47 |
| Msa0142410 | Msa0864420 | 0.812769 | 3.588350e-51 | -8.615850e-47 |
| Msa0142410 | Msa0865620 | 0.822007 | 2.981701e-53 | -8.615850e-47 |
| Msa0142410 | Msa0870650 | 0.825941 | 3.560850e-54 | -8.615850e-47 |
| Msa0142410 | Msa0879850 | 0.810144 | 1.333603e-50 | -8.615850e-47 |
| Msa0142410 | Msa0892640 | 0.820055 | 8.394776e-53 | -8.615850e-47 |
| Msa0142410 | Msa0903780 | 0.822845 | 1.904779e-53 | -8.615850e-47 |
| Msa0142410 | Msa0913240 | 0.828347 | 9.454447e-55 | -8.615850e-47 |
| Msa0142410 | Msa0928120 | 0.805357 | 1.387946e-49 | -8.615850e-47 |
| Msa0142410 | Msa0943170 | 0.829111 | 6.181058e-55 | -8.615850e-47 |
| Msa0142410 | Msa0944200 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0142410 | Msa0963020 | 0.816068 | 6.690732e-52 | -8.615850e-47 |
| Msa0142410 | Msa0973320 | 0.818443 | 1.955047e-52 | -8.615850e-47 |
| Msa0142410 | Msa0980540 | 0.802424 | 5.647609e-49 | -8.615850e-47 |
| Msa0142410 | Msa0992550 | 0.807710 | 4.425572e-50 | -8.615850e-47 |
| Msa0142410 | Msa0997430 | 0.802226 | 6.202716e-49 | -8.615850e-47 |
| Msa0142410 | Msa1027250 | 0.822850 | 1.899904e-53 | -8.615850e-47 |
| Msa0142410 | Msa1027300 | 0.820793 | 5.684540e-53 | -8.615850e-47 |
| Msa0142410 | Msa1027360 | 0.812896 | 3.365392e-51 | -8.615850e-47 |
| Msa0142410 | Msa1030080 | 0.820224 | 7.679090e-53 | -8.615850e-47 |
| Msa0142410 | Msa1031390 | 0.801818 | 7.524268e-49 | -8.615850e-47 |
| Msa0142410 | Msa1042480 | 0.824933 | 6.170549e-54 | -8.615850e-47 |
| Msa0142410 | Msa1056900 | 0.817464 | 3.252768e-52 | -8.615850e-47 |
| Msa0142410 | Msa1070390 | 0.808614 | 2.840149e-50 | -8.615850e-47 |
| Msa0142410 | Msa1072600 | 0.814519 | 1.478719e-51 | -8.615850e-47 |
| Msa0142410 | Msa1072710 | 0.807423 | 5.092425e-50 | -8.615850e-47 |
| Msa0142410 | Msa1089270 | 0.822250 | 2.618807e-53 | -8.615850e-47 |
| Msa0142410 | Msa1123350 | 0.879171 | 1.548484e-69 | -8.615850e-47 |
| Msa0142410 | Msa1126830 | 0.831963 | 1.238825e-55 | -8.615850e-47 |
| Msa0142410 | Msa1127540 | 0.859704 | 3.439356e-63 | -8.615850e-47 |
| Msa0142410 | Msa1127590 | 0.837233 | 5.866183e-57 | -8.615850e-47 |
| Msa0142410 | Msa1131560 | 0.817590 | 3.047000e-52 | -8.615850e-47 |
| Msa0142410 | Msa1145240 | 0.808904 | 2.462740e-50 | -8.615850e-47 |
| Msa0142410 | Msa1158230 | 0.804132 | 2.501839e-49 | -8.615850e-47 |
| Msa0142410 | Msa1165780 | 0.856397 | 3.308173e-62 | -8.615850e-47 |
| Msa0142410 | Msa1166870 | 0.802961 | 4.374630e-49 | -8.615850e-47 |
| Msa0142410 | Msa1173900 | 0.806155 | 9.434319e-50 | -8.615850e-47 |
| Msa0142410 | Msa1201640 | 0.801697 | 7.966742e-49 | -8.615850e-47 |
| Msa0142410 | Msa1201810 | 0.811449 | 6.964056e-51 | -8.615850e-47 |
| Msa0142410 | Msa1201830 | 0.816352 | 5.780277e-52 | -8.615850e-47 |
| Msa0142410 | Msa1202580 | 0.832556 | 8.835915e-56 | -8.615850e-47 |
| Msa0142410 | Msa1205480 | 0.809728 | 1.639696e-50 | -8.615850e-47 |
| Msa0142410 | Msa1206650 | 0.849814 | 2.540230e-60 | -8.615850e-47 |
| Msa0142410 | Msa1208020 | 0.813639 | 2.311799e-51 | -8.615850e-47 |
| Msa0142410 | Msa1211830 | 0.815592 | 8.544807e-52 | -8.615850e-47 |
| Msa0142410 | Msa1214320 | 0.810137 | 1.338613e-50 | -8.615850e-47 |
| Msa0142410 | Msa1226610 | 0.817993 | 2.471958e-52 | -8.615850e-47 |
| Msa0142410 | Msa1255410 | 0.813174 | 2.924516e-51 | -8.615850e-47 |
| Msa0142410 | Msa1262890 | 0.816870 | 4.425008e-52 | -8.615850e-47 |
| Msa0142410 | Msa1264210 | 0.805545 | 1.267729e-49 | -8.615850e-47 |
| Msa0142410 | Msa1270620 | 0.803256 | 3.801275e-49 | -8.615850e-47 |
| Msa0142410 | Msa1276970 | 0.831735 | 1.410178e-55 | -8.615850e-47 |
| Msa0142410 | Msa1292020 | 0.810958 | 8.897128e-51 | -8.615850e-47 |
| Msa0142410 | Msa1298100 | 0.840995 | 6.214117e-58 | -8.615850e-47 |
| Msa0142410 | Msa1331250 | 0.829150 | 6.045213e-55 | -8.615850e-47 |
| Msa0142410 | Msa1335160 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
| Msa0142410 | Msa1336560 | 0.800691 | 1.279860e-48 | -8.615850e-47 |
| Msa0142410 | Msa1344310 | 0.831895 | 1.287671e-55 | -8.615850e-47 |
| Msa0142410 | Msa1351540 | 0.831495 | 1.616182e-55 | -8.615850e-47 |
| Msa0142410 | Msa1356610 | 0.840203 | 1.001812e-57 | -8.615850e-47 |
| Msa0142410 | Msa1364160 | 0.825953 | 3.538127e-54 | -8.615850e-47 |
| Msa0142410 | Msa1366390 | 0.802585 | 5.231596e-49 | -8.615850e-47 |
| Msa0142410 | Msa1369890 | 0.801027 | 1.092685e-48 | -8.615850e-47 |
| Msa0142410 | Msa1373170 | 0.809739 | 1.630520e-50 | -8.615850e-47 |
| Msa0142410 | Msa1373820 | 0.821650 | 3.607805e-53 | -8.615850e-47 |
| Msa0142410 | Msa1374170 | 0.821107 | 4.814104e-53 | -8.615850e-47 |
| Msa0142410 | Msa1382670 | 0.821185 | 4.618713e-53 | -8.615850e-47 |
| Msa0142410 | Msa1391480 | 0.999414 | 8.653052e-310 | -8.615850e-47 |
| Msa0142410 | Msa1398790 | 0.995307 | 5.534937e-215 | -8.615850e-47 |
| Msa0142410 | Msa1400820 | 0.809114 | 2.220194e-50 | -8.615850e-47 |
| Msa0142410 | Msa1403570 | 0.825797 | 3.853483e-54 | -8.615850e-47 |
| Msa0142410 | Msa1409950 | 0.812718 | 3.682493e-51 | -8.615850e-47 |
| Msa0142410 | Msa1411500 | 0.810255 | 1.262210e-50 | -8.615850e-47 |
| Msa0142410 | Msa1411950 | 0.839296 | 1.725100e-57 | -8.615850e-47 |
| Msa0142410 | Msa1418240 | 0.817026 | 4.081754e-52 | -8.615850e-47 |
| Msa0142410 | Msa1418500 | 0.823681 | 1.215100e-53 | -8.615850e-47 |
| Msa0142410 | Msa1421560 | 0.829541 | 4.858400e-55 | -8.615850e-47 |
| Msa0142410 | Msa1427160 | 0.818178 | 2.244110e-52 | -8.615850e-47 |
| Msa0142410 | Msa1432480 | 0.822381 | 2.441728e-53 | -8.615850e-47 |
| Msa0142410 | Msa1433600 | 0.800508 | 1.394437e-48 | -8.615850e-47 |
| Msa0142410 | Msa1433870 | 0.814787 | 1.289350e-51 | -8.615850e-47 |
| Msa0142410 | Msa1435440 | 0.806551 | 7.785789e-50 | -8.615850e-47 |
| Msa0142410 | Msa1450720 | 0.830221 | 3.317304e-55 | -8.615850e-47 |
| Msa0142410 | Msa1454680 | 0.812469 | 4.173103e-51 | -8.615850e-47 |
| Msa0142410 | Msa1459910 | 0.823467 | 1.363672e-53 | -8.615850e-47 |
| Msa0142410 | Msa1459960 | 0.855990 | 4.352415e-62 | -8.615850e-47 |
| Msa0142410 | Msa1462910 | 0.834355 | 3.144580e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142410 | MtrunA17_Chr8g0383991 | 95.738 | 305 | 11 | 1 | 1 | 305 | 1 | 303 | 0.0 | 587 |
| Msa0142410 | MtrunA17_Chr3g0142891 | 30.660 | 212 | 93 | 3 | 139 | 302 | 52 | 257 | 6.82e-23 | 95.1 |
| Msa0142410 | MtrunA17_Chr3g0142871 | 30.702 | 228 | 98 | 4 | 132 | 302 | 428 | 652 | 1.07e-22 | 98.2 |
| Msa0142410 | MtrunA17_Chr7g0269901 | 31.140 | 228 | 97 | 4 | 132 | 302 | 428 | 652 | 1.47e-22 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142410 | AT5G45420.2 | 51.553 | 322 | 119 | 10 | 1 | 301 | 1 | 306 | 1.59e-82 | 251 |
| Msa0142410 | AT5G45420.1 | 51.553 | 322 | 119 | 10 | 1 | 301 | 1 | 306 | 1.59e-82 | 251 |
| Msa0142410 | AT5G45420.3 | 51.553 | 322 | 119 | 10 | 1 | 301 | 1 | 306 | 1.59e-82 | 251 |
| Msa0142410 | AT3G11450.1 | 34.615 | 182 | 80 | 3 | 159 | 302 | 466 | 646 | 6.90e-22 | 96.3 |
| Msa0142410 | AT5G06110.1 | 30.732 | 205 | 97 | 4 | 140 | 300 | 457 | 660 | 7.68e-19 | 87.4 |
| Msa0142410 | AT5G06110.2 | 30.732 | 205 | 97 | 4 | 140 | 300 | 457 | 660 | 7.68e-19 | 87.4 |
Find 96 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACGATTTCGTTGGTTTC+TGG | 0.174909 | 1_4:+1310000 | None:intergenic |
| AAAGTTGCTGCTGCTGTTCC+TGG | 0.293700 | 1_4:-1309267 | Msa0142410:CDS |
| TCGGTTGAGGTTTCCTGATC+GGG | 0.354119 | 1_4:+1309798 | None:intergenic |
| GTGAGAAAGTTGAAAGTGTT+TGG | 0.354834 | 1_4:-1309362 | Msa0142410:CDS |
| CAGAATTGAAGAAAGGGTTT+CGG | 0.376978 | 1_4:-1309212 | Msa0142410:CDS |
| TGCATTGTCGGCGGCGGTGG+TGG | 0.384974 | 1_4:-1309646 | Msa0142410:CDS |
| GGGTTTCGGACTGCAAAATC+TGG | 0.390024 | 1_4:-1309198 | Msa0142410:CDS |
| TTTGCATTCTCTCTCCTCCT+TGG | 0.398248 | 1_4:-1309888 | Msa0142410:CDS |
| TTCGCTCCAATCTCCATTAC+CGG | 0.403852 | 1_4:-1309861 | Msa0142410:CDS |
| TTGAAGAATCGAAATGGAAA+TGG | 0.409406 | 1_4:-1309678 | Msa0142410:CDS |
| ATCGTCCGATCTGCGTTGCT+TGG | 0.410728 | 1_4:+1309737 | None:intergenic |
| CATCTCATAGCAACATCTTT+CGG | 0.412166 | 1_4:+1309294 | None:intergenic |
| AAAGGAGTTGGGAGAGAAGA+AGG | 0.421544 | 1_4:-1309475 | Msa0142410:CDS |
| AGAGAAGAAGGTTGATGATT+CGG | 0.423910 | 1_4:-1309463 | Msa0142410:CDS |
| GATAAGAGACTTGTTGAAGA+AGG | 0.424391 | 1_4:-1309402 | Msa0142410:CDS |
| GTCGGCGGCGGTGGTGGAGG+AGG | 0.424999 | 1_4:-1309640 | Msa0142410:CDS |
| TGTTGCATTGTCGGCGGCGG+TGG | 0.428265 | 1_4:-1309649 | Msa0142410:CDS |
| CGGGTGCACCGGACTGATAC+AGG | 0.433545 | 1_4:+1310045 | None:intergenic |
| ATTGTCGGCGGCGGTGGTGG+AGG | 0.433697 | 1_4:-1309643 | Msa0142410:CDS |
| TGGAAACGGTGTTGCATTGT+CGG | 0.435353 | 1_4:-1309658 | Msa0142410:CDS |
| ACGGGAATCGCCGCCGGTAA+TGG | 0.437783 | 1_4:+1309848 | None:intergenic |
| TGCCGTCAATTTCCCCGATC+AGG | 0.438106 | 1_4:-1309811 | Msa0142410:CDS |
| GGCGGCGGTGGTGGAGGAGG+AGG | 0.446195 | 1_4:-1309637 | Msa0142410:CDS |
| TCGCCGCCGGTAATGGAGAT+TGG | 0.447359 | 1_4:+1309855 | None:intergenic |
| AGAATTGCAGAATTGAAGAA+AGG | 0.450045 | 1_4:-1309219 | Msa0142410:CDS |
| ATCGGTTGAGGTTTCCTGAT+CGG | 0.454293 | 1_4:+1309797 | None:intergenic |
| GAGGCGATAGCGGAGGCATT+CGG | 0.458797 | 1_4:-1309534 | Msa0142410:CDS |
| GATTTCGTTGGTTTCTGGTA+AGG | 0.461575 | 1_4:+1310005 | None:intergenic |
| TTCAGTGGCCGCGGGTGCAC+CGG | 0.461986 | 1_4:+1310034 | None:intergenic |
| CGAAAGATGTTGCTATGAGA+TGG | 0.463082 | 1_4:-1309293 | Msa0142410:CDS |
| TGGAGGAGGAGGAGAAGGAA+TGG | 0.463216 | 1_4:-1309626 | Msa0142410:CDS |
| GTTTCGTTGAAGAATCGAAA+TGG | 0.464225 | 1_4:-1309684 | Msa0142410:CDS |
| CAACCGATGAGGATGATTCC+AGG | 0.465520 | 1_4:-1309782 | Msa0142410:CDS |
| GGCGATTCCCGTGTCGGCCG+TGG | 0.468929 | 1_4:-1309837 | Msa0142410:CDS |
| GGAATCATCCTCATCGGTTG+AGG | 0.470477 | 1_4:+1309785 | None:intergenic |
| TCGATTTGAGCGGTTCAGAT+TGG | 0.470526 | 1_4:+1309922 | None:intergenic |
| AGGCTGTGATTCAGTGGCCG+CGG | 0.476901 | 1_4:+1310025 | None:intergenic |
| CGGCATGACCACGGCCGACA+CGG | 0.478990 | 1_4:+1309829 | None:intergenic |
| TTCAACGAAACCACCGGCGC+TGG | 0.480043 | 1_4:+1309696 | None:intergenic |
| GGCATGACCACGGCCGACAC+GGG | 0.485981 | 1_4:+1309830 | None:intergenic |
| GGTGGTGGAGGAGGAGGAGA+AGG | 0.492408 | 1_4:-1309631 | Msa0142410:CDS |
| AAGAGACTTGTTGAAGAAGG+AGG | 0.496476 | 1_4:-1309399 | Msa0142410:CDS |
| TCCCACCGTCCTGGTTTCCC+CGG | 0.499822 | 1_4:+1309555 | None:intergenic |
| GAAGATTGAAGAGATTGAAA+CGG | 0.500067 | 1_4:+1309968 | None:intergenic |
| GGCTGTGATTCAGTGGCCGC+GGG | 0.502205 | 1_4:+1310026 | None:intergenic |
| GAATTGCAGAATTGAAGAAA+GGG | 0.503367 | 1_4:-1309218 | Msa0142410:CDS |
| CAAGCTGCTTTCGATTTCCC+AGG | 0.506123 | 1_4:+1309249 | None:intergenic |
| CACCGTCCTGGTTTCCCCGG+TGG | 0.513685 | 1_4:+1309558 | None:intergenic |
| GCCGACACGGGAATCGCCGC+CGG | 0.516860 | 1_4:+1309842 | None:intergenic |
| GGTGAAGAAATCAAAGGAGT+TGG | 0.518193 | 1_4:-1309487 | Msa0142410:CDS |
| CGGTGTTGCATTGTCGGCGG+CGG | 0.518420 | 1_4:-1309652 | Msa0142410:CDS |
| GTGAAGAAATCAAAGGAGTT+GGG | 0.518866 | 1_4:-1309486 | Msa0142410:CDS |
| CGATTCTTCAACGAAACCAC+CGG | 0.522401 | 1_4:+1309690 | None:intergenic |
| GAAGGAGGAGATTTAGCGAC+GGG | 0.533839 | 1_4:-1309384 | Msa0142410:CDS |
| TCTGAAGAAGAGAAAAGCGT+TGG | 0.535242 | 1_4:-1309424 | Msa0142410:CDS |
| GCTATCGCCTCCCACCGTCC+TGG | 0.536007 | 1_4:+1309546 | None:intergenic |
| CTCTGTAGTAGCTCCAGCGC+CGG | 0.539400 | 1_4:-1309709 | Msa0142410:CDS |
| AATCGAAATGGAAATGGAAA+CGG | 0.539438 | 1_4:-1309672 | Msa0142410:CDS |
| ACCGGCGGCGATTCCCGTGT+CGG | 0.539977 | 1_4:-1309843 | Msa0142410:CDS |
| TTTCCTGGAATCATCCTCAT+CGG | 0.539989 | 1_4:+1309779 | None:intergenic |
| AGGACGGTGGGAGGCGATAG+CGG | 0.545275 | 1_4:-1309544 | Msa0142410:CDS |
| GGGGAAACCAGGACGGTGGG+AGG | 0.546154 | 1_4:-1309553 | Msa0142410:CDS |
| CAGATCCAAGCAACGCAGAT+CGG | 0.552256 | 1_4:-1309742 | Msa0142410:CDS |
| AAGTTGCTGCTGCTGTTCCT+GGG | 0.554829 | 1_4:-1309266 | Msa0142410:CDS |
| ACCGGGGAAACCAGGACGGT+GGG | 0.559178 | 1_4:-1309556 | Msa0142410:CDS |
| CCGAAGTTCCTGTATCAGTC+CGG | 0.563162 | 1_4:-1310053 | Msa0142410:CDS |
| GGCATTCGGAGGGCGTCACA+AGG | 0.566101 | 1_4:-1309520 | Msa0142410:CDS |
| GAAAGATGTTGCTATGAGAT+GGG | 0.567305 | 1_4:-1309292 | Msa0142410:CDS |
| CTGGTAAGGCTGTGATTCAG+TGG | 0.573589 | 1_4:+1310019 | None:intergenic |
| CCGGACTGATACAGGAACTT+CGG | 0.574834 | 1_4:+1310053 | None:intergenic |
| TGTAGTAGCTCCAGCGCCGG+TGG | 0.575392 | 1_4:-1309706 | Msa0142410:CDS |
| CACCGGGGAAACCAGGACGG+TGG | 0.578167 | 1_4:-1309557 | Msa0142410:CDS |
| TTCCTGATCGGGGAAATTGA+CGG | 0.583685 | 1_4:+1309809 | None:intergenic |
| GCGATAGCGGAGGCATTCGG+AGG | 0.585439 | 1_4:-1309531 | Msa0142410:CDS |
| GGAAATTGACGGCATGACCA+CGG | 0.588936 | 1_4:+1309820 | None:intergenic |
| GTATCAGTCCGGTGCACCCG+CGG | 0.599158 | 1_4:-1310042 | Msa0142410:CDS |
| GCGTCACAAGGTGGAAAGCG+TGG | 0.605173 | 1_4:-1309508 | Msa0142410:CDS |
| GTAATGGAGATTGGAGCGAA+AGG | 0.608208 | 1_4:+1309864 | None:intergenic |
| ACAGCGATGAACGATTTCGT+TGG | 0.617295 | 1_4:+1309993 | None:intergenic |
| TGAGATTCTGAAGAAACAGA+TGG | 0.629866 | 1_4:-1309589 | Msa0142410:CDS |
| CGGTTGAGGTTTCCTGATCG+GGG | 0.631525 | 1_4:+1309799 | None:intergenic |
| ATCCACCGGGGAAACCAGGA+CGG | 0.634948 | 1_4:-1309560 | Msa0142410:CDS |
| AAGTGTTTGGAGTTCAAACG+AGG | 0.645478 | 1_4:-1309349 | Msa0142410:CDS |
| AGAAGGAGGAGATTTAGCGA+CGG | 0.648578 | 1_4:-1309385 | Msa0142410:CDS |
| CGGCGCTGGAGCTACTACAG+AGG | 0.650195 | 1_4:+1309710 | None:intergenic |
| CGATAGCGGAGGCATTCGGA+GGG | 0.653736 | 1_4:-1309530 | Msa0142410:CDS |
| GCTCCAATCTCCATTACCGG+CGG | 0.663325 | 1_4:-1309858 | Msa0142410:CDS |
| ACGGTGGGAGGCGATAGCGG+AGG | 0.665574 | 1_4:-1309541 | Msa0142410:CDS |
| AAGCGTGGTGAAGAAATCAA+AGG | 0.666488 | 1_4:-1309493 | Msa0142410:CDS |
| AAACGGTGTTGCATTGTCGG+CGG | 0.669146 | 1_4:-1309655 | Msa0142410:CDS |
| TCAGGAAACCTCAACCGATG+AGG | 0.671357 | 1_4:-1309793 | Msa0142410:CDS |
| AGATTGGAGCGAAAGGACCA+AGG | 0.675323 | 1_4:+1309871 | None:intergenic |
| ATTCGGAGGGCGTCACAAGG+TGG | 0.679939 | 1_4:-1309517 | Msa0142410:CDS |
| CAGATGAAAATCGATTTGAG+CGG | 0.706129 | 1_4:+1309912 | None:intergenic |
| TTGGAGCGAAAGGACCAAGG+AGG | 0.738797 | 1_4:+1309874 | None:intergenic |
| GGAGAAGGAATGGAACGACG+AGG | 0.745135 | 1_4:-1309616 | Msa0142410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GAAGATTGAAGAGATTGAAA+CGG | + | chr1_4:1309300-1309319 | None:intergenic | 30.0% | |
| TTGAAGAATCGAAATGGAAA+TGG | - | chr1_4:1309587-1309606 | Msa0142410:CDS | 30.0% | |
| AATCGAAATGGAAATGGAAA+CGG | - | chr1_4:1309593-1309612 | Msa0142410:CDS | 30.0% | |
| AGAATTGCAGAATTGAAGAA+AGG | - | chr1_4:1310046-1310065 | Msa0142410:CDS | 30.0% | |
| GAATTGCAGAATTGAAGAAA+GGG | - | chr1_4:1310047-1310066 | Msa0142410:CDS | 30.0% | |
| GAAGATTGAAGAGATTGAAA+CGG | + | chr1_4:1309300-1309319 | None:intergenic | 30.0% | |
| TTGAAGAATCGAAATGGAAA+TGG | - | chr1_4:1309587-1309606 | Msa0142410:CDS | 30.0% | |
| AATCGAAATGGAAATGGAAA+CGG | - | chr1_4:1309593-1309612 | Msa0142410:CDS | 30.0% | |
| AGAATTGCAGAATTGAAGAA+AGG | - | chr1_4:1310046-1310065 | Msa0142410:CDS | 30.0% | |
| GAATTGCAGAATTGAAGAAA+GGG | - | chr1_4:1310047-1310066 | Msa0142410:CDS | 30.0% | |
| !! | CAGATGAAAATCGATTTGAG+CGG | + | chr1_4:1309356-1309375 | None:intergenic | 35.0% |
| GTTTCGTTGAAGAATCGAAA+TGG | - | chr1_4:1309581-1309600 | Msa0142410:CDS | 35.0% | |
| ! | TGAGATTCTGAAGAAACAGA+TGG | - | chr1_4:1309676-1309695 | Msa0142410:CDS | 35.0% |
| GTGAAGAAATCAAAGGAGTT+GGG | - | chr1_4:1309779-1309798 | Msa0142410:CDS | 35.0% | |
| !! | AGAGAAGAAGGTTGATGATT+CGG | - | chr1_4:1309802-1309821 | Msa0142410:CDS | 35.0% |
| !! | GATAAGAGACTTGTTGAAGA+AGG | - | chr1_4:1309863-1309882 | Msa0142410:CDS | 35.0% |
| !! | GTGAGAAAGTTGAAAGTGTT+TGG | - | chr1_4:1309903-1309922 | Msa0142410:CDS | 35.0% |
| CATCTCATAGCAACATCTTT+CGG | + | chr1_4:1309974-1309993 | None:intergenic | 35.0% | |
| GAAAGATGTTGCTATGAGAT+GGG | - | chr1_4:1309973-1309992 | Msa0142410:CDS | 35.0% | |
| CAGAATTGAAGAAAGGGTTT+CGG | - | chr1_4:1310053-1310072 | Msa0142410:CDS | 35.0% | |
| !! | CAGATGAAAATCGATTTGAG+CGG | + | chr1_4:1309356-1309375 | None:intergenic | 35.0% |
| GTTTCGTTGAAGAATCGAAA+TGG | - | chr1_4:1309581-1309600 | Msa0142410:CDS | 35.0% | |
| ! | TGAGATTCTGAAGAAACAGA+TGG | - | chr1_4:1309676-1309695 | Msa0142410:CDS | 35.0% |
| GTGAAGAAATCAAAGGAGTT+GGG | - | chr1_4:1309779-1309798 | Msa0142410:CDS | 35.0% | |
| !! | AGAGAAGAAGGTTGATGATT+CGG | - | chr1_4:1309802-1309821 | Msa0142410:CDS | 35.0% |
| !! | GATAAGAGACTTGTTGAAGA+AGG | - | chr1_4:1309863-1309882 | Msa0142410:CDS | 35.0% |
| !! | GTGAGAAAGTTGAAAGTGTT+TGG | - | chr1_4:1309903-1309922 | Msa0142410:CDS | 35.0% |
| CATCTCATAGCAACATCTTT+CGG | + | chr1_4:1309974-1309993 | None:intergenic | 35.0% | |
| GAAAGATGTTGCTATGAGAT+GGG | - | chr1_4:1309973-1309992 | Msa0142410:CDS | 35.0% | |
| CAGAATTGAAGAAAGGGTTT+CGG | - | chr1_4:1310053-1310072 | Msa0142410:CDS | 35.0% | |
| !! | GATTTCGTTGGTTTCTGGTA+AGG | + | chr1_4:1309263-1309282 | None:intergenic | 40.0% |
| !! | TGAACGATTTCGTTGGTTTC+TGG | + | chr1_4:1309268-1309287 | None:intergenic | 40.0% |
| !! | CGCTCAAATCGATTTTCATC+TGG | - | chr1_4:1309354-1309373 | Msa0142410:CDS | 40.0% |
| TTTCCTGGAATCATCCTCAT+CGG | + | chr1_4:1309489-1309508 | None:intergenic | 40.0% | |
| ACAGATGGTGAAAAATCCAC+CGG | - | chr1_4:1309691-1309710 | Msa0142410:CDS | 40.0% | |
| AAGCGTGGTGAAGAAATCAA+AGG | - | chr1_4:1309772-1309791 | Msa0142410:CDS | 40.0% | |
| GGTGAAGAAATCAAAGGAGT+TGG | - | chr1_4:1309778-1309797 | Msa0142410:CDS | 40.0% | |
| ! | TCTGAAGAAGAGAAAAGCGT+TGG | - | chr1_4:1309841-1309860 | Msa0142410:CDS | 40.0% |
| !! | AAGAGACTTGTTGAAGAAGG+AGG | - | chr1_4:1309866-1309885 | Msa0142410:CDS | 40.0% |
| ! | AAGTGTTTGGAGTTCAAACG+AGG | - | chr1_4:1309916-1309935 | Msa0142410:CDS | 40.0% |
| CGAAAGATGTTGCTATGAGA+TGG | - | chr1_4:1309972-1309991 | Msa0142410:CDS | 40.0% | |
| !! | GATTTCGTTGGTTTCTGGTA+AGG | + | chr1_4:1309263-1309282 | None:intergenic | 40.0% |
| !! | TGAACGATTTCGTTGGTTTC+TGG | + | chr1_4:1309268-1309287 | None:intergenic | 40.0% |
| !! | CGCTCAAATCGATTTTCATC+TGG | - | chr1_4:1309354-1309373 | Msa0142410:CDS | 40.0% |
| TTTCCTGGAATCATCCTCAT+CGG | + | chr1_4:1309489-1309508 | None:intergenic | 40.0% | |
| ACAGATGGTGAAAAATCCAC+CGG | - | chr1_4:1309691-1309710 | Msa0142410:CDS | 40.0% | |
| AAGCGTGGTGAAGAAATCAA+AGG | - | chr1_4:1309772-1309791 | Msa0142410:CDS | 40.0% | |
| GGTGAAGAAATCAAAGGAGT+TGG | - | chr1_4:1309778-1309797 | Msa0142410:CDS | 40.0% | |
| ! | TCTGAAGAAGAGAAAAGCGT+TGG | - | chr1_4:1309841-1309860 | Msa0142410:CDS | 40.0% |
| !! | AAGAGACTTGTTGAAGAAGG+AGG | - | chr1_4:1309866-1309885 | Msa0142410:CDS | 40.0% |
| ! | AAGTGTTTGGAGTTCAAACG+AGG | - | chr1_4:1309916-1309935 | Msa0142410:CDS | 40.0% |
| CGAAAGATGTTGCTATGAGA+TGG | - | chr1_4:1309972-1309991 | Msa0142410:CDS | 40.0% | |
| ACAGCGATGAACGATTTCGT+TGG | + | chr1_4:1309275-1309294 | None:intergenic | 45.0% | |
| ! | TCGATTTGAGCGGTTCAGAT+TGG | + | chr1_4:1309346-1309365 | None:intergenic | 45.0% |
| TTTGCATTCTCTCTCCTCCT+TGG | - | chr1_4:1309377-1309396 | Msa0142410:CDS | 45.0% | |
| ! | GTAATGGAGATTGGAGCGAA+AGG | + | chr1_4:1309404-1309423 | None:intergenic | 45.0% |
| TTCGCTCCAATCTCCATTAC+CGG | - | chr1_4:1309404-1309423 | Msa0142410:CDS | 45.0% | |
| TTCCTGATCGGGGAAATTGA+CGG | + | chr1_4:1309459-1309478 | None:intergenic | 45.0% | |
| ATCGGTTGAGGTTTCCTGAT+CGG | + | chr1_4:1309471-1309490 | None:intergenic | 45.0% | |
| CGATTCTTCAACGAAACCAC+CGG | + | chr1_4:1309578-1309597 | None:intergenic | 45.0% | |
| !! | TGGAAACGGTGTTGCATTGT+CGG | - | chr1_4:1309607-1309626 | Msa0142410:CDS | 45.0% |
| CAGATGGTGAAAAATCCACC+GGG | - | chr1_4:1309692-1309711 | Msa0142410:CDS | 45.0% | |
| AGATGGTGAAAAATCCACCG+GGG | - | chr1_4:1309693-1309712 | Msa0142410:CDS | 45.0% | |
| AAAGGAGTTGGGAGAGAAGA+AGG | - | chr1_4:1309790-1309809 | Msa0142410:CDS | 45.0% | |
| AGAAGGAGGAGATTTAGCGA+CGG | - | chr1_4:1309880-1309899 | Msa0142410:CDS | 45.0% | |
| ACAGCGATGAACGATTTCGT+TGG | + | chr1_4:1309275-1309294 | None:intergenic | 45.0% | |
| ! | TCGATTTGAGCGGTTCAGAT+TGG | + | chr1_4:1309346-1309365 | None:intergenic | 45.0% |
| TTTGCATTCTCTCTCCTCCT+TGG | - | chr1_4:1309377-1309396 | Msa0142410:CDS | 45.0% | |
| ! | GTAATGGAGATTGGAGCGAA+AGG | + | chr1_4:1309404-1309423 | None:intergenic | 45.0% |
| TTCGCTCCAATCTCCATTAC+CGG | - | chr1_4:1309404-1309423 | Msa0142410:CDS | 45.0% | |
| TTCCTGATCGGGGAAATTGA+CGG | + | chr1_4:1309459-1309478 | None:intergenic | 45.0% | |
| ATCGGTTGAGGTTTCCTGAT+CGG | + | chr1_4:1309471-1309490 | None:intergenic | 45.0% | |
| CGATTCTTCAACGAAACCAC+CGG | + | chr1_4:1309578-1309597 | None:intergenic | 45.0% | |
| !! | TGGAAACGGTGTTGCATTGT+CGG | - | chr1_4:1309607-1309626 | Msa0142410:CDS | 45.0% |
| CAGATGGTGAAAAATCCACC+GGG | - | chr1_4:1309692-1309711 | Msa0142410:CDS | 45.0% | |
| AGATGGTGAAAAATCCACCG+GGG | - | chr1_4:1309693-1309712 | Msa0142410:CDS | 45.0% | |
| AAAGGAGTTGGGAGAGAAGA+AGG | - | chr1_4:1309790-1309809 | Msa0142410:CDS | 45.0% | |
| AGAAGGAGGAGATTTAGCGA+CGG | - | chr1_4:1309880-1309899 | Msa0142410:CDS | 45.0% | |
| CCGGACTGATACAGGAACTT+CGG | + | chr1_4:1309215-1309234 | None:intergenic | 50.0% | |
| CCGAAGTTCCTGTATCAGTC+CGG | - | chr1_4:1309212-1309231 | Msa0142410:CDS | 50.0% | |
| CTGGTAAGGCTGTGATTCAG+TGG | + | chr1_4:1309249-1309268 | None:intergenic | 50.0% | |
| AGATTGGAGCGAAAGGACCA+AGG | + | chr1_4:1309397-1309416 | None:intergenic | 50.0% | |
| GGAAATTGACGGCATGACCA+CGG | + | chr1_4:1309448-1309467 | None:intergenic | 50.0% | |
| TCGGTTGAGGTTTCCTGATC+GGG | + | chr1_4:1309470-1309489 | None:intergenic | 50.0% | |
| TCAGGAAACCTCAACCGATG+AGG | - | chr1_4:1309472-1309491 | Msa0142410:CDS | 50.0% | |
| ! | GGAATCATCCTCATCGGTTG+AGG | + | chr1_4:1309483-1309502 | None:intergenic | 50.0% |
| CAACCGATGAGGATGATTCC+AGG | - | chr1_4:1309483-1309502 | Msa0142410:CDS | 50.0% | |
| !!! | GCGCTGCTGAGATTTTTTCC+TGG | + | chr1_4:1309504-1309523 | None:intergenic | 50.0% |
| CAGATCCAAGCAACGCAGAT+CGG | - | chr1_4:1309523-1309542 | Msa0142410:CDS | 50.0% | |
| !! | AAACGGTGTTGCATTGTCGG+CGG | - | chr1_4:1309610-1309629 | Msa0142410:CDS | 50.0% |
| AAAAATCCACCGGGGAAACC+AGG | - | chr1_4:1309701-1309720 | Msa0142410:CDS | 50.0% | |
| GAAGGAGGAGATTTAGCGAC+GGG | - | chr1_4:1309881-1309900 | Msa0142410:CDS | 50.0% | |
| AAAGTTGCTGCTGCTGTTCC+TGG | - | chr1_4:1309998-1310017 | Msa0142410:CDS | 50.0% | |
| AAGTTGCTGCTGCTGTTCCT+GGG | - | chr1_4:1309999-1310018 | Msa0142410:CDS | 50.0% | |
| ! | CAAGCTGCTTTCGATTTCCC+AGG | + | chr1_4:1310019-1310038 | None:intergenic | 50.0% |
| GGGTTTCGGACTGCAAAATC+TGG | - | chr1_4:1310067-1310086 | Msa0142410:CDS | 50.0% | |
| CCGGACTGATACAGGAACTT+CGG | + | chr1_4:1309215-1309234 | None:intergenic | 50.0% | |
| CCGAAGTTCCTGTATCAGTC+CGG | - | chr1_4:1309212-1309231 | Msa0142410:CDS | 50.0% | |
| CTGGTAAGGCTGTGATTCAG+TGG | + | chr1_4:1309249-1309268 | None:intergenic | 50.0% | |
| AGATTGGAGCGAAAGGACCA+AGG | + | chr1_4:1309397-1309416 | None:intergenic | 50.0% | |
| GGAAATTGACGGCATGACCA+CGG | + | chr1_4:1309448-1309467 | None:intergenic | 50.0% | |
| TCGGTTGAGGTTTCCTGATC+GGG | + | chr1_4:1309470-1309489 | None:intergenic | 50.0% | |
| TCAGGAAACCTCAACCGATG+AGG | - | chr1_4:1309472-1309491 | Msa0142410:CDS | 50.0% | |
| ! | GGAATCATCCTCATCGGTTG+AGG | + | chr1_4:1309483-1309502 | None:intergenic | 50.0% |
| CAACCGATGAGGATGATTCC+AGG | - | chr1_4:1309483-1309502 | Msa0142410:CDS | 50.0% | |
| !!! | GCGCTGCTGAGATTTTTTCC+TGG | + | chr1_4:1309504-1309523 | None:intergenic | 50.0% |
| CAGATCCAAGCAACGCAGAT+CGG | - | chr1_4:1309523-1309542 | Msa0142410:CDS | 50.0% | |
| !! | AAACGGTGTTGCATTGTCGG+CGG | - | chr1_4:1309610-1309629 | Msa0142410:CDS | 50.0% |
| AAAAATCCACCGGGGAAACC+AGG | - | chr1_4:1309701-1309720 | Msa0142410:CDS | 50.0% | |
| GAAGGAGGAGATTTAGCGAC+GGG | - | chr1_4:1309881-1309900 | Msa0142410:CDS | 50.0% | |
| AAAGTTGCTGCTGCTGTTCC+TGG | - | chr1_4:1309998-1310017 | Msa0142410:CDS | 50.0% | |
| AAGTTGCTGCTGCTGTTCCT+GGG | - | chr1_4:1309999-1310018 | Msa0142410:CDS | 50.0% | |
| ! | CAAGCTGCTTTCGATTTCCC+AGG | + | chr1_4:1310019-1310038 | None:intergenic | 50.0% |
| GGGTTTCGGACTGCAAAATC+TGG | - | chr1_4:1310067-1310086 | Msa0142410:CDS | 50.0% | |
| TTGGAGCGAAAGGACCAAGG+AGG | + | chr1_4:1309394-1309413 | None:intergenic | 55.0% | |
| GCTCCAATCTCCATTACCGG+CGG | - | chr1_4:1309407-1309426 | Msa0142410:CDS | 55.0% | |
| TGCCGTCAATTTCCCCGATC+AGG | - | chr1_4:1309454-1309473 | Msa0142410:CDS | 55.0% | |
| CGGTTGAGGTTTCCTGATCG+GGG | + | chr1_4:1309469-1309488 | None:intergenic | 55.0% | |
| ATCGTCCGATCTGCGTTGCT+TGG | + | chr1_4:1309531-1309550 | None:intergenic | 55.0% | |
| TGGAGGAGGAGGAGAAGGAA+TGG | - | chr1_4:1309639-1309658 | Msa0142410:CDS | 55.0% | |
| GGAGAAGGAATGGAACGACG+AGG | - | chr1_4:1309649-1309668 | Msa0142410:CDS | 55.0% | |
| TTGGAGCGAAAGGACCAAGG+AGG | + | chr1_4:1309394-1309413 | None:intergenic | 55.0% | |
| GCTCCAATCTCCATTACCGG+CGG | - | chr1_4:1309407-1309426 | Msa0142410:CDS | 55.0% | |
| TGCCGTCAATTTCCCCGATC+AGG | - | chr1_4:1309454-1309473 | Msa0142410:CDS | 55.0% | |
| CGGTTGAGGTTTCCTGATCG+GGG | + | chr1_4:1309469-1309488 | None:intergenic | 55.0% | |
| ATCGTCCGATCTGCGTTGCT+TGG | + | chr1_4:1309531-1309550 | None:intergenic | 55.0% | |
| TGGAGGAGGAGGAGAAGGAA+TGG | - | chr1_4:1309639-1309658 | Msa0142410:CDS | 55.0% | |
| GGAGAAGGAATGGAACGACG+AGG | - | chr1_4:1309649-1309668 | Msa0142410:CDS | 55.0% | |
| AGGCTGTGATTCAGTGGCCG+CGG | + | chr1_4:1309243-1309262 | None:intergenic | 60.0% | |
| !! | TCGCCGCCGGTAATGGAGAT+TGG | + | chr1_4:1309413-1309432 | None:intergenic | 60.0% |
| CTCTGTAGTAGCTCCAGCGC+CGG | - | chr1_4:1309556-1309575 | Msa0142410:CDS | 60.0% | |
| TTCAACGAAACCACCGGCGC+TGG | + | chr1_4:1309572-1309591 | None:intergenic | 60.0% | |
| ATCCACCGGGGAAACCAGGA+CGG | - | chr1_4:1309705-1309724 | Msa0142410:CDS | 60.0% | |
| !! | GAGGCGATAGCGGAGGCATT+CGG | - | chr1_4:1309731-1309750 | Msa0142410:CDS | 60.0% |
| !! | CGATAGCGGAGGCATTCGGA+GGG | - | chr1_4:1309735-1309754 | Msa0142410:CDS | 60.0% |
| !! | ATTCGGAGGGCGTCACAAGG+TGG | - | chr1_4:1309748-1309767 | Msa0142410:CDS | 60.0% |
| GCGTCACAAGGTGGAAAGCG+TGG | - | chr1_4:1309757-1309776 | Msa0142410:CDS | 60.0% | |
| AGGCTGTGATTCAGTGGCCG+CGG | + | chr1_4:1309243-1309262 | None:intergenic | 60.0% | |
| !! | TCGCCGCCGGTAATGGAGAT+TGG | + | chr1_4:1309413-1309432 | None:intergenic | 60.0% |
| CTCTGTAGTAGCTCCAGCGC+CGG | - | chr1_4:1309556-1309575 | Msa0142410:CDS | 60.0% | |
| TTCAACGAAACCACCGGCGC+TGG | + | chr1_4:1309572-1309591 | None:intergenic | 60.0% | |
| ATCCACCGGGGAAACCAGGA+CGG | - | chr1_4:1309705-1309724 | Msa0142410:CDS | 60.0% | |
| !! | GAGGCGATAGCGGAGGCATT+CGG | - | chr1_4:1309731-1309750 | Msa0142410:CDS | 60.0% |
| !! | CGATAGCGGAGGCATTCGGA+GGG | - | chr1_4:1309735-1309754 | Msa0142410:CDS | 60.0% |
| !! | ATTCGGAGGGCGTCACAAGG+TGG | - | chr1_4:1309748-1309767 | Msa0142410:CDS | 60.0% |
| GCGTCACAAGGTGGAAAGCG+TGG | - | chr1_4:1309757-1309776 | Msa0142410:CDS | 60.0% | |
| CGGGTGCACCGGACTGATAC+AGG | + | chr1_4:1309223-1309242 | None:intergenic | 65.0% | |
| GTATCAGTCCGGTGCACCCG+CGG | - | chr1_4:1309223-1309242 | Msa0142410:CDS | 65.0% | |
| GGCTGTGATTCAGTGGCCGC+GGG | + | chr1_4:1309242-1309261 | None:intergenic | 65.0% | |
| ACGGGAATCGCCGCCGGTAA+TGG | + | chr1_4:1309420-1309439 | None:intergenic | 65.0% | |
| ! | CGGCGCTGGAGCTACTACAG+AGG | + | chr1_4:1309558-1309577 | None:intergenic | 65.0% |
| ! | TGTAGTAGCTCCAGCGCCGG+TGG | - | chr1_4:1309559-1309578 | Msa0142410:CDS | 65.0% |
| !! | CGGTGTTGCATTGTCGGCGG+CGG | - | chr1_4:1309613-1309632 | Msa0142410:CDS | 65.0% |
| TGTTGCATTGTCGGCGGCGG+TGG | - | chr1_4:1309616-1309635 | Msa0142410:CDS | 65.0% | |
| !! | GGTGGTGGAGGAGGAGGAGA+AGG | - | chr1_4:1309634-1309653 | Msa0142410:CDS | 65.0% |
| ACCGGGGAAACCAGGACGGT+GGG | - | chr1_4:1309709-1309728 | Msa0142410:CDS | 65.0% | |
| TCCCACCGTCCTGGTTTCCC+CGG | + | chr1_4:1309713-1309732 | None:intergenic | 65.0% | |
| AGGACGGTGGGAGGCGATAG+CGG | - | chr1_4:1309721-1309740 | Msa0142410:CDS | 65.0% | |
| !! | GCGATAGCGGAGGCATTCGG+AGG | - | chr1_4:1309734-1309753 | Msa0142410:CDS | 65.0% |
| !! | GGCATTCGGAGGGCGTCACA+AGG | - | chr1_4:1309745-1309764 | Msa0142410:CDS | 65.0% |
| CGGGTGCACCGGACTGATAC+AGG | + | chr1_4:1309223-1309242 | None:intergenic | 65.0% | |
| GTATCAGTCCGGTGCACCCG+CGG | - | chr1_4:1309223-1309242 | Msa0142410:CDS | 65.0% | |
| GGCTGTGATTCAGTGGCCGC+GGG | + | chr1_4:1309242-1309261 | None:intergenic | 65.0% | |
| ACGGGAATCGCCGCCGGTAA+TGG | + | chr1_4:1309420-1309439 | None:intergenic | 65.0% | |
| ! | CGGCGCTGGAGCTACTACAG+AGG | + | chr1_4:1309558-1309577 | None:intergenic | 65.0% |
| ! | TGTAGTAGCTCCAGCGCCGG+TGG | - | chr1_4:1309559-1309578 | Msa0142410:CDS | 65.0% |
| !! | CGGTGTTGCATTGTCGGCGG+CGG | - | chr1_4:1309613-1309632 | Msa0142410:CDS | 65.0% |
| TGTTGCATTGTCGGCGGCGG+TGG | - | chr1_4:1309616-1309635 | Msa0142410:CDS | 65.0% | |
| !! | GGTGGTGGAGGAGGAGGAGA+AGG | - | chr1_4:1309634-1309653 | Msa0142410:CDS | 65.0% |
| ACCGGGGAAACCAGGACGGT+GGG | - | chr1_4:1309709-1309728 | Msa0142410:CDS | 65.0% | |
| TCCCACCGTCCTGGTTTCCC+CGG | + | chr1_4:1309713-1309732 | None:intergenic | 65.0% | |
| AGGACGGTGGGAGGCGATAG+CGG | - | chr1_4:1309721-1309740 | Msa0142410:CDS | 65.0% | |
| !! | GCGATAGCGGAGGCATTCGG+AGG | - | chr1_4:1309734-1309753 | Msa0142410:CDS | 65.0% |
| !! | GGCATTCGGAGGGCGTCACA+AGG | - | chr1_4:1309745-1309764 | Msa0142410:CDS | 65.0% |
| TTCAGTGGCCGCGGGTGCAC+CGG | + | chr1_4:1309234-1309253 | None:intergenic | 70.0% | |
| ACCGGCGGCGATTCCCGTGT+CGG | - | chr1_4:1309422-1309441 | Msa0142410:CDS | 70.0% | |
| GGCATGACCACGGCCGACAC+GGG | + | chr1_4:1309438-1309457 | None:intergenic | 70.0% | |
| CGGCATGACCACGGCCGACA+CGG | + | chr1_4:1309439-1309458 | None:intergenic | 70.0% | |
| TGCATTGTCGGCGGCGGTGG+TGG | - | chr1_4:1309619-1309638 | Msa0142410:CDS | 70.0% | |
| ! | ATTGTCGGCGGCGGTGGTGG+AGG | - | chr1_4:1309622-1309641 | Msa0142410:CDS | 70.0% |
| CACCGTCCTGGTTTCCCCGG+TGG | + | chr1_4:1309710-1309729 | None:intergenic | 70.0% | |
| CACCGGGGAAACCAGGACGG+TGG | - | chr1_4:1309708-1309727 | Msa0142410:CDS | 70.0% | |
| GGGGAAACCAGGACGGTGGG+AGG | - | chr1_4:1309712-1309731 | Msa0142410:CDS | 70.0% | |
| GCTATCGCCTCCCACCGTCC+TGG | + | chr1_4:1309722-1309741 | None:intergenic | 70.0% | |
| ! | ACGGTGGGAGGCGATAGCGG+AGG | - | chr1_4:1309724-1309743 | Msa0142410:CDS | 70.0% |
| TTCAGTGGCCGCGGGTGCAC+CGG | + | chr1_4:1309234-1309253 | None:intergenic | 70.0% | |
| ACCGGCGGCGATTCCCGTGT+CGG | - | chr1_4:1309422-1309441 | Msa0142410:CDS | 70.0% | |
| GGCATGACCACGGCCGACAC+GGG | + | chr1_4:1309438-1309457 | None:intergenic | 70.0% | |
| CGGCATGACCACGGCCGACA+CGG | + | chr1_4:1309439-1309458 | None:intergenic | 70.0% | |
| TGCATTGTCGGCGGCGGTGG+TGG | - | chr1_4:1309619-1309638 | Msa0142410:CDS | 70.0% | |
| ! | ATTGTCGGCGGCGGTGGTGG+AGG | - | chr1_4:1309622-1309641 | Msa0142410:CDS | 70.0% |
| CACCGTCCTGGTTTCCCCGG+TGG | + | chr1_4:1309710-1309729 | None:intergenic | 70.0% | |
| CACCGGGGAAACCAGGACGG+TGG | - | chr1_4:1309708-1309727 | Msa0142410:CDS | 70.0% | |
| GGGGAAACCAGGACGGTGGG+AGG | - | chr1_4:1309712-1309731 | Msa0142410:CDS | 70.0% | |
| GCTATCGCCTCCCACCGTCC+TGG | + | chr1_4:1309722-1309741 | None:intergenic | 70.0% | |
| ! | ACGGTGGGAGGCGATAGCGG+AGG | - | chr1_4:1309724-1309743 | Msa0142410:CDS | 70.0% |
| GCCGACACGGGAATCGCCGC+CGG | + | chr1_4:1309426-1309445 | None:intergenic | 75.0% | |
| ! | GGCGATTCCCGTGTCGGCCG+TGG | - | chr1_4:1309428-1309447 | Msa0142410:CDS | 75.0% |
| GCCGACACGGGAATCGCCGC+CGG | + | chr1_4:1309426-1309445 | None:intergenic | 75.0% | |
| ! | GGCGATTCCCGTGTCGGCCG+TGG | - | chr1_4:1309428-1309447 | Msa0142410:CDS | 75.0% |
| !!! | GTCGGCGGCGGTGGTGGAGG+AGG | - | chr1_4:1309625-1309644 | Msa0142410:CDS | 80.0% |
| !!! | GGCGGCGGTGGTGGAGGAGG+AGG | - | chr1_4:1309628-1309647 | Msa0142410:CDS | 80.0% |
| !!! | GTCGGCGGCGGTGGTGGAGG+AGG | - | chr1_4:1309625-1309644 | Msa0142410:CDS | 80.0% |
| !!! | GGCGGCGGTGGTGGAGGAGG+AGG | - | chr1_4:1309628-1309647 | Msa0142410:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 1309185 | 1310102 | 1309185 | ID=Msa0142410;Name=Msa0142410 |
| chr1_4 | mRNA | 1309185 | 1310102 | 1309185 | ID=Msa0142410-mRNA-1;Parent=Msa0142410;Name=Msa0142410-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|305 |
| chr1_4 | exon | 1309185 | 1310102 | 1309185 | ID=Msa0142410-mRNA-1:exon:461;Parent=Msa0142410-mRNA-1 |
| chr1_4 | CDS | 1309185 | 1310102 | 1309185 | ID=Msa0142410-mRNA-1:cds;Parent=Msa0142410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
