AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0427780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427780 MtrunA17_Chr3g0130711 97.736 751 9 1 3 753 1 743 0.0 1524
Msa0427780 MtrunA17_Chr2g0326481 56.534 727 293 8 27 750 20 726 0.0 825
Msa0427780 MtrunA17_Chr8g0372421 52.688 744 321 8 5 745 13 728 0.0 807
Msa0427780 MtrunA17_Chr8g0342001 52.139 748 330 6 1 745 3 725 0.0 803
Msa0427780 MtrunA17_Chr4g0029301 54.945 728 305 9 27 750 24 732 0.0 802
Msa0427780 MtrunA17_Chr2g0330291 54.834 724 305 5 25 745 24 728 0.0 799
Msa0427780 MtrunA17_Chr2g0299161 53.171 741 313 7 5 743 17 725 0.0 795
Msa0427780 MtrunA17_Chr5g0404841 52.695 742 325 7 7 746 9 726 0.0 793
Msa0427780 MtrunA17_Chr1g0152571 54.219 723 309 7 24 743 26 729 0.0 786
Msa0427780 MtrunA17_Chr3g0142001 51.007 745 341 8 9 750 9 732 0.0 774
Msa0427780 MtrunA17_Chr1g0155701 51.582 727 329 8 29 752 29 735 0.0 773
Msa0427780 MtrunA17_Chr8g0378221 50.067 741 325 11 28 739 49 773 0.0 733
Msa0427780 MtrunA17_Chr2g0301001 49.401 751 350 13 7 748 10 739 0.0 704
Msa0427780 MtrunA17_Chr5g0406921 48.853 741 348 11 10 740 9 728 0.0 699
Msa0427780 MtrunA17_Chr5g0408371 48.396 717 348 9 29 741 28 726 0.0 687
Msa0427780 MtrunA17_Chr3g0130721 46.040 745 350 11 1 740 1 698 0.0 648
Msa0427780 MtrunA17_Chr3g0077531 46.165 717 363 9 26 736 23 722 0.0 646
Msa0427780 MtrunA17_Chr3g0124931 46.467 736 337 13 7 740 7 687 0.0 632
Msa0427780 MtrunA17_Chr4g0037031 44.430 745 368 12 3 741 7 711 0.0 629
Msa0427780 MtrunA17_Chr3g0145581 42.570 747 375 14 4 741 6 707 0.0 600
Msa0427780 MtrunA17_Chr2g0326491 55.621 507 173 4 27 490 20 517 0.0 575
Msa0427780 MtrunA17_Chr2g0326441 64.130 276 91 1 27 302 20 287 1.68e-126 379
Msa0427780 MtrunA17_Chr2g0326451 49.286 420 198 8 331 745 23 432 2.19e-125 385
Msa0427780 MtrunA17_Chr2g0326521 44.700 217 90 5 532 745 6 195 1.30e-49 176
Msa0427780 MtrunA17_Chr5g0405781 45.604 182 75 2 191 372 54 211 1.37e-43 161
Msa0427780 MtrunA17_Chr4g0071281 39.827 231 132 4 507 735 18 243 4.08e-38 142
Msa0427780 MtrunA17_Chr8g0372581 45.283 159 56 4 151 309 10 137 2.94e-33 124
Msa0427780 MtrunA17_Chr4g0071291 42.857 140 48 1 25 164 18 125 1.01e-30 117
Msa0427780 MtrunA17_Chr2g0307981 29.167 288 164 8 451 732 38 291 7.62e-30 120
Msa0427780 MtrunA17_Chr2g0330191 29.268 328 177 10 39 332 64 370 6.80e-25 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427780 AT5G63810.1 68.309 751 219 4 3 746 1 739 0.0 1100
Msa0427780 AT2G28470.1 55.021 727 308 6 23 745 26 737 0.0 831
Msa0427780 AT2G28470.3 55.021 727 308 6 23 745 26 737 0.0 831
Msa0427780 AT2G28470.2 55.021 727 308 6 23 745 20 731 0.0 831
Msa0427780 AT2G28470.4 55.021 727 308 6 23 745 20 731 0.0 831
Msa0427780 AT3G13750.1 55.135 740 310 5 9 745 14 734 0.0 830
Msa0427780 AT4G36360.1 52.660 733 325 7 18 747 22 735 0.0 791
Msa0427780 AT4G36360.2 52.660 733 325 7 18 747 22 735 0.0 791
Msa0427780 AT3G52840.2 54.014 735 315 8 11 743 65 778 0.0 781
Msa0427780 AT3G52840.1 53.557 745 323 8 1 743 1 724 0.0 781
Msa0427780 AT1G45130.1 51.673 747 333 8 9 746 5 732 0.0 779
Msa0427780 AT5G56870.1 53.243 740 318 10 6 743 10 723 0.0 777
Msa0427780 AT2G28470.5 54.493 690 295 6 23 708 26 700 0.0 774
Msa0427780 AT4G26140.1 52.559 723 317 9 25 743 25 725 0.0 754
Msa0427780 AT4G26140.7 50.936 748 316 11 25 743 25 750 0.0 740
Msa0427780 AT2G32810.1 48.859 745 346 10 28 752 37 766 0.0 731
Msa0427780 AT2G32810.2 48.859 745 346 10 28 752 37 766 0.0 730
Msa0427780 AT5G20710.1 48.123 746 345 13 7 740 13 728 0.0 712
Msa0427780 AT4G26140.9 50.769 715 301 11 25 710 25 717 0.0 696
Msa0427780 AT1G45130.2 51.515 660 298 7 90 746 13 653 0.0 684
Msa0427780 AT5G63800.1 47.036 759 352 10 1 753 1 715 0.0 672
Msa0427780 AT1G31740.1 46.113 746 329 17 3 740 2 682 0.0 644
Msa0427780 AT1G77410.3 45.822 742 346 13 7 740 4 697 0.0 640
Msa0427780 AT4G26140.3 52.998 617 269 7 25 639 25 622 0.0 639
Msa0427780 AT4G26140.2 52.998 617 269 7 25 639 25 622 0.0 639
Msa0427780 AT1G77410.1 45.822 742 341 13 7 740 4 692 0.0 639
Msa0427780 AT4G26140.6 52.989 619 268 8 25 639 25 624 0.0 637
Msa0427780 AT2G16730.1 44.660 721 347 15 29 741 44 720 0.0 606
Msa0427780 AT4G26140.8 54.595 555 228 8 25 576 25 558 0.0 594
Msa0427780 AT4G35010.1 43.644 708 352 12 29 731 41 706 0.0 588
Msa0427780 AT4G26140.4 52.586 580 226 10 25 576 25 583 0.0 581
Msa0427780 AT4G26140.5 52.586 580 226 10 25 576 25 583 0.0 581
Msa0427780 AT4G38590.1 43.172 681 339 12 59 733 1 639 0.0 552
Msa0427780 AT4G38590.2 42.584 681 339 13 59 733 69 703 2.03e-178 539
Msa0427780 AT1G77410.2 43.871 620 288 12 129 740 19 586 1.10e-168 503
Msa0427780 AT1G77410.4 43.871 620 288 12 129 740 19 586 1.10e-168 503
Msa0427780 AT5G20710.2 46.097 538 263 11 215 740 1 523 2.25e-164 488
Msa0427780 AT2G04060.1 34.667 375 162 10 302 674 23 316 2.41e-49 181
Msa0427780 AT1G72990.3 31.429 350 185 10 39 354 18 346 2.11e-33 137
Msa0427780 AT1G72990.1 31.429 350 185 10 39 354 73 401 2.77e-33 137
Msa0427780 AT1G72990.4 31.429 350 185 10 39 354 73 401 2.77e-33 137
Msa0427780 AT2G04062.1 37.363 182 81 3 29 208 7 157 2.05e-30 117
Msa0427780 AT1G72990.2 31.003 329 172 10 60 354 32 339 1.95e-28 121

Find 224 sgRNAs with CRISPR-Local

Find 508 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAAGGCTTCCACCTTTC+TGG 0.116473 3_2:+78442346 None:intergenic
CCAATTATTTCCTGATAAAA+TGG 0.181454 3_2:-78437649 None:intergenic
GTTGCTGCAGAATGGAATTT+TGG 0.198599 3_2:-78444075 Msa0427780:CDS
ACTTGCCTGGGATAAGATTA+TGG 0.198890 3_2:+78443454 None:intergenic
CCAGTTCTCAGTCCACATTT+TGG 0.202497 3_2:+78442896 None:intergenic
TCTAAGGTTTAATCTATAAT+AGG 0.205697 3_2:-78437832 Msa0427780:three_prime_UTR
TGTTAAGGTTTAAGACTTTC+GGG 0.208361 3_2:-78442425 Msa0427780:intron
TCCTTAAGATGTCCCCATTT+TGG 0.209550 3_2:+78441913 None:intergenic
CTCACATTCACTTTGGTATA+TGG 0.226355 3_2:-78444597 Msa0427780:CDS
ATCATCAACGTTAGAAATAA+AGG 0.234077 3_2:+78441171 None:intergenic
TGGATTGGATATGTTGTATA+TGG 0.262763 3_2:-78438774 Msa0427780:CDS
TTCATATTACATACCATAAA+AGG 0.267490 3_2:+78443660 None:intergenic
GAAAATACATTGATTCAAAA+TGG 0.268031 3_2:+78437749 None:intergenic
GTAACAAGTGTTAAGATTAT+TGG 0.268204 3_2:-78439261 Msa0427780:CDS
AAAGTATCTGGAGCCCCTTC+TGG 0.275871 3_2:-78438100 Msa0427780:CDS
GTACCATGTAGTAATTATTA+AGG 0.286717 3_2:+78442331 None:intergenic
CAACCAGTGTCACATTTATC+TGG 0.287344 3_2:+78438638 None:intergenic
GGTTGCCTAGACTTCCAAAA+TGG 0.295682 3_2:-78441927 Msa0427780:CDS
ATGTTAAGGTTTAAGACTTT+CGG 0.296557 3_2:-78442426 Msa0427780:intron
TAAATATATAGATGTATTAT+TGG 0.300892 3_2:-78437860 Msa0427780:three_prime_UTR
GAGCTTGACCGTTGGCTTGC+AGG 0.305364 3_2:-78439452 Msa0427780:intron
TGACTTACCATACTCATCTA+TGG 0.307088 3_2:+78442074 None:intergenic
CATGTCAATGCCTGCCCTTT+TGG 0.308433 3_2:+78438946 None:intergenic
TGTATTATTGGCTAGCTCTA+AGG 0.313958 3_2:-78437848 Msa0427780:three_prime_UTR
TTAATGTTACTTACATTTCC+TGG 0.315645 3_2:+78444284 None:intergenic
ATGATAAGACAGTGGTATTT+CGG 0.323095 3_2:-78441144 Msa0427780:CDS
CTTGAACAACCTTTGCAAAC+TGG 0.325413 3_2:+78444136 None:intergenic
CTGGTTTGCTTCCTTTCTTT+AGG 0.327025 3_2:+78439986 None:intergenic
AAAGGTCTAGCCTGGTTAAA+TGG 0.330100 3_2:-78438749 Msa0427780:CDS
TTGCAGATAGAAAATGAATA+TGG 0.334921 3_2:-78443299 Msa0427780:intron
TCCAAAATGGGGACATCTTA+AGG 0.342076 3_2:-78441914 Msa0427780:CDS
AAAGCTTCTCTTTCTTCATA+AGG 0.354255 3_2:+78443495 None:intergenic
CAAACTTGGTTATACTTGCC+TGG 0.363840 3_2:+78443441 None:intergenic
GCCCCTTCTGGAAAATCTTA+AGG 0.365133 3_2:-78438088 Msa0427780:exon
CATTTCCTGGAGAAAGTTCA+TGG 0.365910 3_2:+78444297 None:intergenic
CGATCTTGGTTCAAGCCATC+TGG 0.372055 3_2:-78438187 Msa0427780:CDS
CTAGGTACTGGAACTGGAAA+TGG 0.373902 3_2:-78439544 Msa0427780:intron
TTGGAGAGGTAGGTGTAAAT+TGG 0.375113 3_2:+78442925 None:intergenic
GAGAAGAAATTGGAAGATAT+TGG 0.375715 3_2:-78438727 Msa0427780:CDS
TCAAGGAGAATCCAGGGATC+TGG 0.376766 3_2:-78440465 Msa0427780:CDS
TGGTTAAATGGAGAAGAAAT+TGG 0.380567 3_2:-78438737 Msa0427780:CDS
CAGGTAATCAGTGGTATCTT+TGG 0.383419 3_2:+78440393 None:intergenic
GGTATCATGTTCCACGATCT+TGG 0.391098 3_2:-78438201 Msa0427780:CDS
GCTATTGTAGATGCTCCATC+TGG 0.391883 3_2:-78438809 Msa0427780:CDS
TTAAGAACCCCATCTCTCTC+AGG 0.394136 3_2:-78439501 Msa0427780:CDS
GCCCCTATGAAGTCATAAAA+TGG 0.395212 3_2:+78439288 None:intergenic
TGTGAGCATGTATTGCTCTA+TGG 0.395979 3_2:-78441868 Msa0427780:CDS
CTCACGAACGTAATCTTTGT+TGG 0.400871 3_2:+78438127 None:intergenic
TTCCATTCTGCAGCAACAAA+TGG 0.403178 3_2:+78444081 None:intergenic
GGAATATAATGCAGCCATAC+TGG 0.404939 3_2:+78443711 None:intergenic
CTTGTCATCTTTGAGGAGAA+AGG 0.407494 3_2:-78438157 Msa0427780:CDS
TTTCAAGTGTGAATGTGATT+TGG 0.409392 3_2:+78444665 None:intergenic
CCTTGATGTTCAGTATCATA+TGG 0.410996 3_2:-78443543 Msa0427780:intron
TGGTAAGAAATATGCCTTAT+GGG 0.411045 3_2:-78443249 Msa0427780:CDS
AGGAAGATCTAAATAATTCA+TGG 0.413508 3_2:+78437785 None:intergenic
GGCAATATCTGTGTCCGAAC+CGG 0.419054 3_2:-78444830 Msa0427780:five_prime_UTR
GATGCTCCCATAGATGAGTA+TGG 0.420055 3_2:-78442081 Msa0427780:intron
GCAAAGGTTGTTCAAGATGC+TGG 0.423222 3_2:-78444129 Msa0427780:CDS
ATGGTAAGAAATATGCCTTA+TGG 0.423286 3_2:-78443250 Msa0427780:CDS
AAATGTTCTTGTCATCTTTG+AGG 0.425054 3_2:-78438164 Msa0427780:CDS
CATTTGCAGCAATCAGATAA+AGG 0.427998 3_2:-78440514 Msa0427780:CDS
GGTCATCTTACCACAGGATC+TGG 0.429357 3_2:+78443161 None:intergenic
CTAAGGTTTAATCTATAATA+GGG 0.429462 3_2:-78437831 Msa0427780:three_prime_UTR
TGAACTTTGTAGTATTACTT+TGG 0.431793 3_2:-78444177 Msa0427780:intron
CAGCAACAAATGGGCCGATT+CGG 0.432081 3_2:+78444091 None:intergenic
TCATTGCAACTATGTTTGTC+GGG 0.435700 3_2:+78440545 None:intergenic
CATCTTCTAGGTACTGGAAC+TGG 0.437196 3_2:-78439550 Msa0427780:intron
CAAGGAGAATCCAGGGATCT+GGG 0.441903 3_2:-78440464 Msa0427780:CDS
CCCCTTCTGGAAAATCTTAA+GGG 0.443936 3_2:-78438087 Msa0427780:exon
CCAAAATGTGGACTGAGAAC+TGG 0.445231 3_2:-78442896 Msa0427780:CDS
ATGGTCAGTTAGCATTCTTC+CGG 0.445803 3_2:-78441098 Msa0427780:CDS
AACCCCATCTCTCTCAGGGC+TGG 0.446102 3_2:-78439496 Msa0427780:CDS
GTATGGCTGCATTATATTCC+AGG 0.448393 3_2:-78443708 Msa0427780:CDS
CTTGCCTGGGATAAGATTAT+GGG 0.448529 3_2:+78443455 None:intergenic
ATCATTGCAACTATGTTTGT+CGG 0.450630 3_2:+78440544 None:intergenic
TTTGTGAATCAGAAATATCA+AGG 0.450877 3_2:-78439925 Msa0427780:intron
TCTGATTGCTGCAAATGCTC+TGG 0.451699 3_2:+78440520 None:intergenic
ATGTGGACTGAGAACTGGCC+TGG 0.453196 3_2:-78442891 Msa0427780:CDS
GATATCTATACTGACTCATC+TGG 0.453553 3_2:-78441205 Msa0427780:CDS
GTGACAAACTTCTACAAACT+TGG 0.454782 3_2:+78443427 None:intergenic
TTCCCAGCCCTGAGAGAGAT+GGG 0.457802 3_2:+78439493 None:intergenic
AACAAGTGCCAAGCTCAAAC+TGG 0.458027 3_2:+78444725 None:intergenic
CTTTGGAGGACGATTCGATC+TGG 0.460011 3_2:-78444160 Msa0427780:CDS
CTTATGTGTGTTAGTATCAC+GGG 0.464427 3_2:-78442161 Msa0427780:intron
ACCCCATCTCTCTCAGGGCT+GGG 0.465337 3_2:-78439495 Msa0427780:CDS
TCATAACTTGTGGTAATGAA+TGG 0.465871 3_2:+78442108 None:intergenic
TTCGTGAGACGTAAAGTATC+TGG 0.466397 3_2:-78438112 Msa0427780:CDS
GTGGAGAGCCTTCACAGAAA+TGG 0.468835 3_2:-78438616 Msa0427780:intron
GTTGCTCGTTTCTTCCAGAA+AGG 0.469040 3_2:-78442360 Msa0427780:CDS
TTGGGCCTCTTTGGAGAGGT+AGG 0.475074 3_2:+78442915 None:intergenic
TTGGATTCTATTAAAAGAGC+TGG 0.478298 3_2:+78439967 None:intergenic
AACACAACATTCTTGCAATC+CGG 0.478519 3_2:+78441079 None:intergenic
CACTATTCATCCCCTCTCCC+TGG 0.481105 3_2:+78438995 None:intergenic
TTCTTAAATTCACTTATCCT+AGG 0.481158 3_2:+78438704 None:intergenic
ACTTAAATGGGATGTATTCA+AGG 0.481248 3_2:-78440482 Msa0427780:CDS
TGAATGGACCACCGGCTGTA+CGG 0.483232 3_2:+78442124 None:intergenic
TGGGGATGAACCAGTTGGAT+TGG 0.484814 3_2:-78438789 Msa0427780:CDS
TATCTCCCTTGGTCCTTCTG+TGG 0.484844 3_2:-78441833 Msa0427780:CDS
AACTTCCCTCACATTCACTT+TGG 0.485698 3_2:-78444604 Msa0427780:CDS
CTCAAAATACAAGCGTCCCT+TGG 0.486606 3_2:-78443208 Msa0427780:CDS
AACACTAACCAGTTTGAGCT+TGG 0.487328 3_2:-78444733 Msa0427780:five_prime_UTR
TAAGTTCTGAATACAGTGCC+TGG 0.487411 3_2:+78443690 None:intergenic
GCCCATTTGTTGCTGCAGAA+TGG 0.488183 3_2:-78444083 Msa0427780:CDS
GATATGTTGTATATGGGAAA+AGG 0.488501 3_2:-78438767 Msa0427780:CDS
ACTTTGTAGTATTACTTTGG+AGG 0.489737 3_2:-78444174 Msa0427780:intron
AATGGCCATGAACTTTCTCC+AGG 0.490459 3_2:-78444302 Msa0427780:CDS
GTTGCCTAGACTTCCAAAAT+GGG 0.490828 3_2:-78441926 Msa0427780:CDS
TCCATTCTGCAGCAACAAAT+GGG 0.493536 3_2:+78444082 None:intergenic
AGCCAAGCTGGTAAATCAAC+TGG 0.495471 3_2:+78437912 None:intergenic
GGTCGCTCACTCATCATTGA+TGG 0.501024 3_2:-78444546 Msa0427780:CDS
AAACTTGGTTATACTTGCCT+GGG 0.501476 3_2:+78443442 None:intergenic
CTTCTTTGATGCAGCCAAGC+TGG 0.502164 3_2:+78437900 None:intergenic
CACCAGTTGATTTACCAGCT+TGG 0.507392 3_2:-78437914 Msa0427780:three_prime_UTR
ATTGCAGTGGAGTACCAGTA+TGG 0.507560 3_2:-78443725 Msa0427780:intron
TACAACATATCCAATCCAAC+TGG 0.507662 3_2:+78438779 None:intergenic
AGAACATCTGAGTATATACC+AGG 0.507790 3_2:-78439013 Msa0427780:CDS
CTACGAAAACTATTATAAAG+AGG 0.508707 3_2:-78443273 Msa0427780:CDS
CTTCCCAGCCCTGAGAGAGA+TGG 0.510780 3_2:+78439492 None:intergenic
GGATTGGATATGTTGTATAT+GGG 0.512466 3_2:-78438773 Msa0427780:CDS
ATTTCAAAACGACCGTGTAC+TGG 0.514255 3_2:-78438023 Msa0427780:three_prime_UTR
AATGAGGAGTTCCTAAAGAA+AGG 0.514409 3_2:-78439997 Msa0427780:CDS
TCAACTTCAGAACCACCAAA+AGG 0.514752 3_2:-78438961 Msa0427780:CDS
ACTTCTCAGATTGGAGTACA+AGG 0.516832 3_2:-78439036 Msa0427780:intron
CCTTATGTGTGTTAGTATCA+CGG 0.525002 3_2:-78442162 Msa0427780:intron
TTTGGTCACAGTAACCGGTT+CGG 0.525588 3_2:+78444816 None:intergenic
CATACTTATTGATGCAAATG+AGG 0.529366 3_2:-78440013 Msa0427780:CDS
CGATCTGGTCCAGTTTGCAA+AGG 0.530694 3_2:-78444145 Msa0427780:CDS
GATGTATTCAAGGAGAATCC+AGG 0.535264 3_2:-78440472 Msa0427780:CDS
ATGGCCATTCCAGAAAACAT+AGG 0.536165 3_2:+78444316 None:intergenic
ATGTACTTGATTCTCCGAAT+CGG 0.537181 3_2:-78444105 Msa0427780:CDS
GACTTACCATACTCATCTAT+GGG 0.537763 3_2:+78442075 None:intergenic
GATAAATGTGACACTGGTTG+TGG 0.539576 3_2:-78438635 Msa0427780:CDS
TCAACAACTATGCTAGAATA+CGG 0.541823 3_2:+78438051 None:intergenic
TGCTAACTGACCATGCTGGC+AGG 0.544083 3_2:+78441107 None:intergenic
CAACTTCAGAACCACCAAAA+GGG 0.544640 3_2:-78438960 Msa0427780:CDS
CATAAGGTTCACTATGTATG+TGG 0.545509 3_2:+78443511 None:intergenic
TTCTAATGCGTGGACATACA+AGG 0.545711 3_2:-78439211 Msa0427780:intron
GGGTCCCATAATCTTATCCC+AGG 0.546486 3_2:-78443459 Msa0427780:CDS
TAGGATAAGTGAATTTAAGA+AGG 0.546567 3_2:-78438702 Msa0427780:CDS
CACTGTTGGCACATTATCCA+AGG 0.549252 3_2:+78443191 None:intergenic
TTTATGCTATAGATGTGGCC+TGG 0.549896 3_2:-78444383 Msa0427780:intron
AATTTCTTCTCCATTTAACC+AGG 0.550678 3_2:+78438739 None:intergenic
CTCCAAAGAGGCCCAAAATG+TGG 0.552756 3_2:-78442908 Msa0427780:CDS
AAATTGGAAGATATTGGCCT+AGG 0.553482 3_2:-78438721 Msa0427780:CDS
CTATTGTAGATGCTCCATCT+GGG 0.555292 3_2:-78438808 Msa0427780:CDS
ATATGGGAAAAGGTCTAGCC+TGG 0.556083 3_2:-78438757 Msa0427780:CDS
CTCCCTTGGTCCTTCTGTGG+AGG 0.556237 3_2:-78441830 Msa0427780:intron
AGGGGATGAATAGTGTGAAG+TGG 0.556458 3_2:-78438987 Msa0427780:CDS
TTCAGAACCACCAAAAGGGC+AGG 0.564274 3_2:-78438956 Msa0427780:CDS
CTGAGTATATACCAGGGAGA+GGG 0.565377 3_2:-78439006 Msa0427780:CDS
TAAGAACCCCATCTCTCTCA+GGG 0.565877 3_2:-78439500 Msa0427780:CDS
AGCATGGAGAGTATGACCCT+TGG 0.567877 3_2:+78439948 None:intergenic
GCTATATTGAGCTTGACCGT+TGG 0.568015 3_2:-78439460 Msa0427780:CDS
AGGTCGGTTAATATCTCCCT+TGG 0.568164 3_2:-78441844 Msa0427780:CDS
GCAGGCATTGACATGGTACA+AGG 0.569368 3_2:-78438938 Msa0427780:intron
ACATTCACTTTGGTATATGG+TGG 0.573464 3_2:-78444594 Msa0427780:CDS
ATTTCTGATTCACAAAAGCA+TGG 0.573486 3_2:+78439932 None:intergenic
AAGGAGAATCCAGGGATCTG+GGG 0.580848 3_2:-78440463 Msa0427780:CDS
AACACTACGAGGGTAATGAA+TGG 0.581894 3_2:+78444497 None:intergenic
TTGAATTCAACATACCATCC+AGG 0.582051 3_2:+78442873 None:intergenic
CATCGTATCACCTGCCAGCA+TGG 0.584137 3_2:-78441117 Msa0427780:CDS
ACATCTTCTGCTGGCCTGTG+AGG 0.586280 3_2:+78442393 None:intergenic
GAAAACTATTATAAAGAGGA+TGG 0.587317 3_2:-78443269 Msa0427780:CDS
CATATACCAAAGTGAATGTG+AGG 0.587389 3_2:+78444598 None:intergenic
ACTTTGGTATATGGTGGTGT+CGG 0.590605 3_2:-78444588 Msa0427780:CDS
CCATCTGGGGATGAACCAGT+TGG 0.590699 3_2:-78438794 Msa0427780:CDS
AGGAGAATCCAGGGATCTGG+GGG 0.593227 3_2:-78440462 Msa0427780:CDS
GCTCGTTTCTTCCAGAAAGG+TGG 0.593427 3_2:-78442357 Msa0427780:CDS
CTTATTCAAACAGCAAAGGA+AGG 0.600936 3_2:-78444359 Msa0427780:CDS
GATCTGGAGCATCCCACTGT+TGG 0.601988 3_2:+78443177 None:intergenic
ATTACCTGTGGCATACGACA+AGG 0.604368 3_2:-78440378 Msa0427780:intron
GGACTGAGAACTGGCCTGGA+TGG 0.605062 3_2:-78442887 Msa0427780:intron
TCCCAGCCCTGAGAGAGATG+GGG 0.605656 3_2:+78439494 None:intergenic
ATGACAAGAACATTTCCAGA+TGG 0.606117 3_2:+78438172 None:intergenic
AAAGAAAATACCTCCACAGA+AGG 0.608018 3_2:+78441820 None:intergenic
AATCCAGATAAATGTGACAC+TGG 0.608292 3_2:-78438641 Msa0427780:CDS
TGAGTATATACCAGGGAGAG+GGG 0.609767 3_2:-78439005 Msa0427780:CDS
TTTGCTGTTTGAATAAGACC+AGG 0.610550 3_2:+78444365 None:intergenic
CAAACCTTGTCGTATGCCAC+AGG 0.610819 3_2:+78440374 None:intergenic
GTTAAGGTTTAAGACTTTCG+GGG 0.614385 3_2:-78442424 Msa0427780:intron
TCTGAGTATATACCAGGGAG+AGG 0.615144 3_2:-78439007 Msa0427780:CDS
CAGAGATAAGAAGCTTGCGT+TGG 0.616286 3_2:+78444523 None:intergenic
AGCATCATAGTCATAACTTG+TGG 0.619696 3_2:+78442098 None:intergenic
ATTCAAACAGCAAAGGAAGG+TGG 0.619732 3_2:-78444356 Msa0427780:CDS
ATGTATTCAAGGAGAATCCA+GGG 0.620853 3_2:-78440471 Msa0427780:CDS
CCAACTGGTTCATCCCCAGA+TGG 0.622884 3_2:+78438794 None:intergenic
CATTGCAACTATGTTTGTCG+GGG 0.625338 3_2:+78440546 None:intergenic
AGAATGCTAACTGACCATGC+TGG 0.626092 3_2:+78441103 None:intergenic
TATCTTTGGTAGTATTGATG+TGG 0.626242 3_2:+78440407 None:intergenic
TGGTCTTATTCAAACAGCAA+AGG 0.630596 3_2:-78444363 Msa0427780:CDS
TGTATTGCTCTATGGAAGGT+CGG 0.633159 3_2:-78441860 Msa0427780:CDS
TACCTCCACAGAAGGACCAA+GGG 0.633166 3_2:+78441828 None:intergenic
CAAAAGGGCAGGCATTGACA+TGG 0.634992 3_2:-78438945 Msa0427780:CDS
GCAAGTCACCTGCAAGCCAA+CGG 0.636915 3_2:+78439444 None:intergenic
CTTGGATAATGTGCCAACAG+TGG 0.637440 3_2:-78443190 Msa0427780:CDS
TGTGGTAATGAATGGACCAC+CGG 0.637537 3_2:+78442116 None:intergenic
TAGACTTGTCTTCTAATGCG+TGG 0.640564 3_2:-78439221 Msa0427780:CDS
TCTATCAATGAAACTTGCAG+TGG 0.640652 3_2:-78438000 Msa0427780:three_prime_UTR
GTGGGATGCTCCAGATCCTG+TGG 0.640974 3_2:-78443171 Msa0427780:intron
AAAATGGCTTACACACTCGA+AGG 0.641094 3_2:+78437765 None:intergenic
GTCATCTTTGAGGAGAAAGG+TGG 0.641664 3_2:-78438154 Msa0427780:CDS
TGTTGTGTTCAACACTGCAA+AGG 0.641983 3_2:-78441065 Msa0427780:intron
TTGGATAATGTGCCAACAGT+GGG 0.644032 3_2:-78443189 Msa0427780:CDS
ATACCTCCACAGAAGGACCA+AGG 0.653214 3_2:+78441827 None:intergenic
AAGCCTTAATAATTACTACA+TGG 0.654512 3_2:-78442334 Msa0427780:intron
TATTGTAGATGCTCCATCTG+GGG 0.656294 3_2:-78438807 Msa0427780:CDS
GATGGCTTGAACCAAGATCG+TGG 0.663637 3_2:+78438190 None:intergenic
AGCATGTATTGCTCTATGGA+AGG 0.664384 3_2:-78441864 Msa0427780:CDS
GGTAGTAACGTCAGCTACGA+CGG 0.664512 3_2:-78444567 Msa0427780:CDS
TTACACCTACCTCTCCAAAG+AGG 0.670569 3_2:-78442920 Msa0427780:CDS
ATATACCAAAGTGAATGTGA+GGG 0.673627 3_2:+78444599 None:intergenic
CGTATGCCACAGGTAATCAG+TGG 0.676978 3_2:+78440384 None:intergenic
ACTGTTGGCACATTATCCAA+GGG 0.678844 3_2:+78443192 None:intergenic
TTATGTGTGTTAGTATCACG+GGG 0.689418 3_2:-78442160 Msa0427780:intron
TTGCCTAGACTTCCAAAATG+GGG 0.690186 3_2:-78441925 Msa0427780:CDS
TTAAGGTTTAAGACTTTCGG+GGG 0.691252 3_2:-78442423 Msa0427780:intron
CTGACAGCAGGAACACTACG+AGG 0.691763 3_2:+78444486 None:intergenic
ATCAACGTTAGAAATAAAGG+CGG 0.697212 3_2:+78441174 None:intergenic
TTCATTGATAGACCAGTACA+CGG 0.700494 3_2:+78438011 None:intergenic
AAGATACCACTGATTACCTG+TGG 0.701515 3_2:-78440390 Msa0427780:CDS
GTTCAAGAATGTGACTACAG+AGG 0.714286 3_2:-78438671 Msa0427780:CDS
GAACATCTGAGTATATACCA+GGG 0.726844 3_2:-78439012 Msa0427780:CDS
TGACAGCAGGAACACTACGA+GGG 0.734429 3_2:+78444487 None:intergenic
TATGTGTGTTAGTATCACGG+GGG 0.825644 3_2:-78442159 Msa0427780:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACATTAACTATTAT+TGG + chr3_2:78439851-78439870 None:intergenic 10.0%
!!! TTTTATTTTACAATTACAAT+AGG - chr3_2:78439987-78440006 Msa0427780:CDS 10.0%
!!! TTTATTTTACAATTACAATA+GGG - chr3_2:78439988-78440007 Msa0427780:CDS 10.0%
!! CATATTAAATTTAATACTAA+AGG - chr3_2:78441817-78441836 Msa0427780:intron 10.0%
!! TAAATATATAGATGTATTAT+TGG - chr3_2:78444621-78444640 Msa0427780:CDS 10.0%
!! AGTGAATAATAATATGATAA+AGG + chr3_2:78438059-78438078 None:intergenic 15.0%
!!! TTTTATGATAACTATGTTAT+AGG + chr3_2:78438681-78438700 None:intergenic 15.0%
!! ACATAGTTATCATAAAAATA+TGG - chr3_2:78438684-78438703 Msa0427780:CDS 15.0%
!!! ATCCATTTTTGTTTATTATT+TGG - chr3_2:78438884-78438903 Msa0427780:intron 15.0%
!! TTAAACAATGTTGAATATTT+AGG - chr3_2:78439403-78439422 Msa0427780:intron 15.0%
!! ATATTAATATTATTCTCCTA+TGG - chr3_2:78440021-78440040 Msa0427780:intron 15.0%
!! TATTAATATTATTCTCCTAT+GGG - chr3_2:78440022-78440041 Msa0427780:intron 15.0%
!!! CTTTTTCTTTTTTAAAATCA+TGG - chr3_2:78440181-78440200 Msa0427780:intron 15.0%
!! AAAAAATACATTTATCCAAA+TGG - chr3_2:78440246-78440265 Msa0427780:intron 15.0%
!! GAAAAATTAAAACTAGAATA+TGG + chr3_2:78440276-78440295 None:intergenic 15.0%
!! TTCTAAATTTAATTGTAAAC+AGG + chr3_2:78440885-78440904 None:intergenic 15.0%
!! AAGATATGATTATCTTATAA+TGG + chr3_2:78441744-78441763 None:intergenic 15.0%
!!! TTCCAAATCATTTTATTATA+GGG + chr3_2:78442333-78442352 None:intergenic 15.0%
!!! TTATAATTTTAACATCTTCT+AGG - chr3_2:78442919-78442938 Msa0427780:CDS 15.0%
!! TTAACTTTATCTAACTAATA+AGG - chr3_2:78444086-78444105 Msa0427780:CDS 15.0%
!! TATTTATGCCAAAAAAAAAT+CGG + chr3_2:78444607-78444626 None:intergenic 15.0%
!! AATTATTTATGCTATAGATG+TGG - chr3_2:78438093-78438112 Msa0427780:CDS 20.0%
!! TTCATATTACATACCATAAA+AGG + chr3_2:78438824-78438843 None:intergenic 20.0%
!! ATTATAAGTAACTCATGATA+AGG - chr3_2:78438843-78438862 Msa0427780:intron 20.0%
!! CTCCAAATAATAAACAAAAA+TGG + chr3_2:78438889-78438908 None:intergenic 20.0%
!! GTAATAACTACTTCAAAAAA+TGG + chr3_2:78439344-78439363 None:intergenic 20.0%
!!! ATGTTGAATATTTAGGATTT+TGG - chr3_2:78439410-78439429 Msa0427780:intron 20.0%
!!! AAATGTATTTTTTGAATGGT+AGG + chr3_2:78440239-78440258 None:intergenic 20.0%
!!! GGATAAATGTATTTTTTGAA+TGG + chr3_2:78440243-78440262 None:intergenic 20.0%
!! AAACTTGAACATTAATTCTA+AGG + chr3_2:78440503-78440522 None:intergenic 20.0%
!! TAAATATATCATAAAACCAC+AGG - chr3_2:78440532-78440551 Msa0427780:CDS 20.0%
!! AAATATATCATAAAACCACA+GGG - chr3_2:78440533-78440552 Msa0427780:CDS 20.0%
!! CATGAAAATTAAATGCTTAA+GGG + chr3_2:78440687-78440706 None:intergenic 20.0%
!! AGAATTTGAATACTATCATT+TGG + chr3_2:78440763-78440782 None:intergenic 20.0%
!!! TTTTAACCATATTGTTGAAA+AGG + chr3_2:78440962-78440981 None:intergenic 20.0%
!!! ACCTAAAAAAAGTGTTTATA+AGG - chr3_2:78441034-78441053 Msa0427780:intron 20.0%
!!! ACCTTATAAACACTTTTTTT+AGG + chr3_2:78441038-78441057 None:intergenic 20.0%
!!! ATGAAAAAGTGTTTATAAGT+GGG + chr3_2:78441071-78441090 None:intergenic 20.0%
!!! AAAAATTGCATTACTTTTCA+AGG + chr3_2:78441613-78441632 None:intergenic 20.0%
!!! AAACTGATGTAATTTTATAC+AGG + chr3_2:78441670-78441689 None:intergenic 20.0%
!! GTAAAACTAATTCAAAATAG+TGG - chr3_2:78442223-78442242 Msa0427780:intron 20.0%
!!! ATTTTACTCCTTAATGTTTT+TGG - chr3_2:78442287-78442306 Msa0427780:intron 20.0%
!!! TTTTACTCCTTAATGTTTTT+GGG - chr3_2:78442288-78442307 Msa0427780:intron 20.0%
!!! TCCAAATCATTTTATTATAG+GGG + chr3_2:78442332-78442351 None:intergenic 20.0%
!!! GTTCCAAATCATTTTATTAT+AGG + chr3_2:78442334-78442353 None:intergenic 20.0%
!!! TTATAACACTTAATTTGCAA+GGG + chr3_2:78442728-78442747 None:intergenic 20.0%
!!! TTTATAACACTTAATTTGCA+AGG + chr3_2:78442729-78442748 None:intergenic 20.0%
!! GATAATTTCATTGTATTTCA+GGG + chr3_2:78442798-78442817 None:intergenic 20.0%
!! CTGAAATACAATGAAATTAT+CGG - chr3_2:78442797-78442816 Msa0427780:intron 20.0%
!! TGAAATACAATGAAATTATC+GGG - chr3_2:78442798-78442817 Msa0427780:intron 20.0%
!! AAGAGTTCAAATCATTTAAA+GGG + chr3_2:78443137-78443156 None:intergenic 20.0%
!! TAAGAGTTCAAATCATTTAA+AGG + chr3_2:78443138-78443157 None:intergenic 20.0%
!!! TTTTAAGATAATAATGCAAG+AGG + chr3_2:78443303-78443322 None:intergenic 20.0%
!!! AAACTTTTTTGCACATAAAA+AGG + chr3_2:78443950-78443969 None:intergenic 20.0%
!! GAAAAAAAATAGACTACAAA+AGG + chr3_2:78444215-78444234 None:intergenic 20.0%
!!! TCTAAGGTTTAATCTATAAT+AGG - chr3_2:78444649-78444668 Msa0427780:exon 20.0%
!! CTAAGGTTTAATCTATAATA+GGG - chr3_2:78444650-78444669 Msa0427780:exon 20.0%
!!! GAAAATACATTGATTCAAAA+TGG + chr3_2:78444735-78444754 None:intergenic 20.0%
! GATAAAGGTAAAGAAATAGT+AGG + chr3_2:78438044-78438063 None:intergenic 25.0%
!! TTAATGTTACTTACATTTCC+TGG + chr3_2:78438200-78438219 None:intergenic 25.0%
! TGAACTTTGTAGTATTACTT+TGG - chr3_2:78438304-78438323 Msa0427780:intron 25.0%
!!! ATTTTTTTTTTTCTAGGCTC+TGG - chr3_2:78438446-78438465 Msa0427780:intron 25.0%
!! AGATTAGTCATTGTTAAACA+AGG - chr3_2:78438637-78438656 Msa0427780:CDS 25.0%
! AAGTCGTCAAAACATATTTA+AGG + chr3_2:78439142-78439161 None:intergenic 25.0%
! TTGCAGATAGAAAATGAATA+TGG - chr3_2:78439182-78439201 Msa0427780:intron 25.0%
! CTACGAAAACTATTATAAAG+AGG - chr3_2:78439208-78439227 Msa0427780:intron 25.0%
! GAAAACTATTATAAAGAGGA+TGG - chr3_2:78439212-78439231 Msa0427780:CDS 25.0%
! TGATGCAAAATATGGATAAT+GGG + chr3_2:78439648-78439667 None:intergenic 25.0%
! TTGATGCAAAATATGGATAA+TGG + chr3_2:78439649-78439668 None:intergenic 25.0%
!!! GAACATTTTGATGCAAAATA+TGG + chr3_2:78439656-78439675 None:intergenic 25.0%
! TTTACTTATCAGTGAAAAAG+GGG + chr3_2:78439785-78439804 None:intergenic 25.0%
! CTTTACTTATCAGTGAAAAA+GGG + chr3_2:78439786-78439805 None:intergenic 25.0%
! ACATTAACTATTATTGGCAA+TGG + chr3_2:78439845-78439864 None:intergenic 25.0%
!! ATGTTAAGGTTTAAGACTTT+CGG - chr3_2:78440055-78440074 Msa0427780:intron 25.0%
! AAGCCTTAATAATTACTACA+TGG - chr3_2:78440147-78440166 Msa0427780:intron 25.0%
! GTACCATGTAGTAATTATTA+AGG + chr3_2:78440153-78440172 None:intergenic 25.0%
! GCTATACATCTTATTGTATT+CGG - chr3_2:78440212-78440231 Msa0427780:intron 25.0%
! CCATGAAAATTAAATGCTTA+AGG + chr3_2:78440688-78440707 None:intergenic 25.0%
!!! CCTTAAGCATTTAATTTTCA+TGG - chr3_2:78440685-78440704 Msa0427780:intron 25.0%
! ATCATTTGGATTGAATATGA+TGG + chr3_2:78440749-78440768 None:intergenic 25.0%
!!! ATTTTTCAGAAACAGAAGAA+GGG + chr3_2:78440923-78440942 None:intergenic 25.0%
!!! AATTTTTCAGAAACAGAAGA+AGG + chr3_2:78440924-78440943 None:intergenic 25.0%
! AAATTACTACAAAGACTTTC+TGG - chr3_2:78440979-78440998 Msa0427780:intron 25.0%
! AATTACTACAAAGACTTTCT+GGG - chr3_2:78440980-78440999 Msa0427780:intron 25.0%
!!! AAAAAAGTGTTTATAAGGTG+AGG - chr3_2:78441039-78441058 Msa0427780:intron 25.0%
!!! CATGAAAAAGTGTTTATAAG+TGG + chr3_2:78441072-78441091 None:intergenic 25.0%
! ATCATCAACGTTAGAAATAA+AGG + chr3_2:78441313-78441332 None:intergenic 25.0%
! TGATAAAAATGATAAGACAG+TGG - chr3_2:78441329-78441348 Msa0427780:intron 25.0%
!! ATGATAAAGTTGCTTTGTTA+AGG + chr3_2:78441487-78441506 None:intergenic 25.0%
! AAGCAACTTTATCATGTATA+AGG - chr3_2:78441492-78441511 Msa0427780:intron 25.0%
!! AAAAGTAATGCAATTTTTGC+AGG - chr3_2:78441615-78441634 Msa0427780:intron 25.0%
! TTATTCGTGAAATATTCAAC+AGG - chr3_2:78441906-78441925 Msa0427780:CDS 25.0%
! AAGGTCAAAAAACACTTAAA+TGG - chr3_2:78441986-78442005 Msa0427780:intron 25.0%
! AGGTCAAAAAACACTTAAAT+GGG - chr3_2:78441987-78442006 Msa0427780:intron 25.0%
! GTTTGTCTAAGTATACAAAA+TGG - chr3_2:78442125-78442144 Msa0427780:CDS 25.0%
!! AAAGTATCAGTCCATAATAT+TGG - chr3_2:78442182-78442201 Msa0427780:intron 25.0%
! AAGTATCAGTCCATAATATT+GGG - chr3_2:78442183-78442202 Msa0427780:intron 25.0%
!!! TTTTTTGGTAAAAAGCAAGT+GGG - chr3_2:78442253-78442272 Msa0427780:intron 25.0%
!! CCAAATCATTTTATTATAGG+GGG + chr3_2:78442331-78442350 None:intergenic 25.0%
! TTTGTGAATCAGAAATATCA+AGG - chr3_2:78442556-78442575 Msa0427780:intron 25.0%
! AAGAAATTACTATCTACTAG+AGG + chr3_2:78442586-78442605 None:intergenic 25.0%
! CGATAATTTCATTGTATTTC+AGG + chr3_2:78442799-78442818 None:intergenic 25.0%
! GTAACAAGTGTTAAGATTAT+TGG - chr3_2:78443220-78443239 Msa0427780:CDS 25.0%
! ATACTAAACAAAAGATGCTT+TGG + chr3_2:78443608-78443627 None:intergenic 25.0%
! TTCTTAAATTCACTTATCCT+AGG + chr3_2:78443780-78443799 None:intergenic 25.0%
! TAGGATAAGTGAATTTAAGA+AGG - chr3_2:78443779-78443798 Msa0427780:intron 25.0%
!!! CCATTTTAGTAAACATATCA+AGG + chr3_2:78443975-78443994 None:intergenic 25.0%
! CCTTGATATGTTTACTAAAA+TGG - chr3_2:78443972-78443991 Msa0427780:intron 25.0%
!!! ACATATCTTTGTTGTTTTCT+TGG + chr3_2:78444019-78444038 None:intergenic 25.0%
! TAAAGTTAAAGAATCCATGA+AGG + chr3_2:78444075-78444094 None:intergenic 25.0%
! CTAATTCACTAAAGAAATTG+AGG + chr3_2:78444153-78444172 None:intergenic 25.0%
!! TTTTGTATTTGTAATGTACC+AGG - chr3_2:78444259-78444278 Msa0427780:intron 25.0%
!! GACAATAATAGCATCATTTT+CGG - chr3_2:78444519-78444538 Msa0427780:CDS 25.0%
! AGGAAGATCTAAATAATTCA+TGG + chr3_2:78444699-78444718 None:intergenic 25.0%
! TTTCAAGTGTGAATGTGATT+TGG + chr3_2:78437819-78437838 None:intergenic 30.0%
! CTTGTGTTTCTTTTTGTGTT+TGG - chr3_2:78437850-78437869 Msa0427780:three_prime_UTR 30.0%
ATATACCAAAGTGAATGTGA+GGG + chr3_2:78437885-78437904 None:intergenic 30.0%
! TCATTGAAACCTATGTTTTC+TGG - chr3_2:78438156-78438175 Msa0427780:CDS 30.0%
ACTTTGTAGTATTACTTTGG+AGG - chr3_2:78438307-78438326 Msa0427780:intron 30.0%
GATCAAAGTCAAATTGCTTA+AGG + chr3_2:78438562-78438581 None:intergenic 30.0%
TAGTCATTGTTAAACAAGGA+TGG - chr3_2:78438641-78438660 Msa0427780:CDS 30.0%
CCACTGCAATATACAAATTA+TGG + chr3_2:78438746-78438765 None:intergenic 30.0%
! CCATAATTTGTATATTGCAG+TGG - chr3_2:78438743-78438762 Msa0427780:CDS 30.0%
! AACTTACAATCAGCCTTTTA+TGG - chr3_2:78438808-78438827 Msa0427780:CDS 30.0%
AAAGCTTCTCTTTCTTCATA+AGG + chr3_2:78438989-78439008 None:intergenic 30.0%
! TATCTGCAATTTTGTGAAGA+TGG + chr3_2:78439171-78439190 None:intergenic 30.0%
ATGGTAAGAAATATGCCTTA+TGG - chr3_2:78439231-78439250 Msa0427780:CDS 30.0%
TGGTAAGAAATATGCCTTAT+GGG - chr3_2:78439232-78439251 Msa0427780:CDS 30.0%
ACATTGTTTAAACAAGCACT+AGG + chr3_2:78439394-78439413 None:intergenic 30.0%
CAATAGTTCTCTTATCTGAT+GGG - chr3_2:78439737-78439756 Msa0427780:intron 30.0%
GCTTTACTTATCAGTGAAAA+AGG + chr3_2:78439787-78439806 None:intergenic 30.0%
! TGTTAAGGTTTAAGACTTTC+GGG - chr3_2:78440056-78440075 Msa0427780:intron 30.0%
! TCATAACTTGTGGTAATGAA+TGG + chr3_2:78440376-78440395 None:intergenic 30.0%
AATTGTAAACAGGATGTCAA+AGG + chr3_2:78440875-78440894 None:intergenic 30.0%
!! AAAAAGTGTTTATAAGTGGG+AGG + chr3_2:78441068-78441087 None:intergenic 30.0%
GGGCTGAATTAAAATTTAGA+TGG + chr3_2:78441152-78441171 None:intergenic 30.0%
!!! CTTAACAAACTGGTTTTGTA+GGG + chr3_2:78441172-78441191 None:intergenic 30.0%
!!! ACTTAACAAACTGGTTTTGT+AGG + chr3_2:78441173-78441192 None:intergenic 30.0%
!! AAAACCAGTTTGTTAAGTGA+GGG - chr3_2:78441175-78441194 Msa0427780:CDS 30.0%
!!! AAAGGTGTTGTTGCTTTTAT+TGG - chr3_2:78441208-78441227 Msa0427780:CDS 30.0%
TTTATTGGCAATTTCTGCAT+AGG - chr3_2:78441223-78441242 Msa0427780:intron 30.0%
ATCAACGTTAGAAATAAAGG+CGG + chr3_2:78441310-78441329 None:intergenic 30.0%
ATGATAAGACAGTGGTATTT+CGG - chr3_2:78441337-78441356 Msa0427780:intron 30.0%
TGTTAAGGAAATATGTCAGT+GGG + chr3_2:78441472-78441491 None:intergenic 30.0%
TTGTTAAGGAAATATGTCAG+TGG + chr3_2:78441473-78441492 None:intergenic 30.0%
TCATGAATAAGAACAGAGTT+TGG - chr3_2:78441638-78441657 Msa0427780:intron 30.0%
! AAGGAAAGAAGTACATAAAC+AGG + chr3_2:78441875-78441894 None:intergenic 30.0%
ATATTTCACGAATAAGTGCA+AGG + chr3_2:78441901-78441920 None:intergenic 30.0%
ATCATTGCAACTATGTTTGT+CGG + chr3_2:78441940-78441959 None:intergenic 30.0%
ACTTAAATGGGATGTATTCA+AGG - chr3_2:78441999-78442018 Msa0427780:intron 30.0%
!!! AAAGCCATTTTTGACAAAGT+CGG + chr3_2:78442049-78442068 None:intergenic 30.0%
!! TATCTTTGGTAGTATTGATG+TGG + chr3_2:78442077-78442096 None:intergenic 30.0%
TAATTCAAAATAGTGGCCAA+CGG - chr3_2:78442230-78442249 Msa0427780:intron 30.0%
!!! GTTTTTTGGTAAAAAGCAAG+TGG - chr3_2:78442252-78442271 Msa0427780:intron 30.0%
CCCCCTATAATAAAATGATT+TGG - chr3_2:78442328-78442347 Msa0427780:intron 30.0%
CATACTTATTGATGCAAATG+AGG - chr3_2:78442468-78442487 Msa0427780:intron 30.0%
TTGGATTCTATTAAAAGAGC+TGG + chr3_2:78442517-78442536 None:intergenic 30.0%
! AGCTCTTTTAATAGAATCCA+AGG - chr3_2:78442516-78442535 Msa0427780:intron 30.0%
! GCTCTTTTAATAGAATCCAA+GGG - chr3_2:78442517-78442536 Msa0427780:intron 30.0%
ATTTCTGATTCACAAAAGCA+TGG + chr3_2:78442552-78442571 None:intergenic 30.0%
TACAAAGGCCAAAAGAAAAT+AGG + chr3_2:78442697-78442716 None:intergenic 30.0%
! TTTTAACATCTTCTAGGTAC+TGG - chr3_2:78442925-78442944 Msa0427780:CDS 30.0%
! TTTTATTGTGTTTAGACTGC+TGG - chr3_2:78443169-78443188 Msa0427780:intron 30.0%
! GACCATTTTATGACTTCATA+GGG - chr3_2:78443191-78443210 Msa0427780:CDS 30.0%
! ACCATTTTATGACTTCATAG+GGG - chr3_2:78443192-78443211 Msa0427780:CDS 30.0%
! GTGTCTTTAAAAGATTGAGA+AGG + chr3_2:78443352-78443371 None:intergenic 30.0%
TCAAAAAAGAATGTGGTCAA+AGG + chr3_2:78443426-78443445 None:intergenic 30.0%
TGAGAAGTCAAAAAAGAATG+TGG + chr3_2:78443433-78443452 None:intergenic 30.0%
!!! TCTTTTTTGACTTCTCAGAT+TGG - chr3_2:78443436-78443455 Msa0427780:CDS 30.0%
!! AGCATCTTTTGTTTAGTATG+AGG - chr3_2:78443609-78443628 Msa0427780:intron 30.0%
! TGGATTGGATATGTTGTATA+TGG - chr3_2:78443707-78443726 Msa0427780:CDS 30.0%
GGATTGGATATGTTGTATAT+GGG - chr3_2:78443708-78443727 Msa0427780:CDS 30.0%
GATATGTTGTATATGGGAAA+AGG - chr3_2:78443714-78443733 Msa0427780:CDS 30.0%
AATTTCTTCTCCATTTAACC+AGG + chr3_2:78443745-78443764 None:intergenic 30.0%
TGGTTAAATGGAGAAGAAAT+TGG - chr3_2:78443744-78443763 Msa0427780:intron 30.0%
GAGAAGAAATTGGAAGATAT+TGG - chr3_2:78443754-78443773 Msa0427780:intron 30.0%
!! TAGTTTTACCATTTCTGTGA+AGG + chr3_2:78443876-78443895 None:intergenic 30.0%
TGGTTCAAAACTATCAGAAA+TGG - chr3_2:78443992-78444011 Msa0427780:intron 30.0%
GGTTCAAAACTATCAGAAAT+GGG - chr3_2:78443993-78444012 Msa0427780:intron 30.0%
!! ATTGATGAATTTGATGATGC+AGG - chr3_2:78444043-78444062 Msa0427780:intron 30.0%
AAATGTTCTTGTCATCTTTG+AGG - chr3_2:78444317-78444336 Msa0427780:CDS 30.0%
TCAACAACTATGCTAGAATA+CGG + chr3_2:78444433-78444452 None:intergenic 30.0%
!!! CAAAGAAGCCGATTTTTTTT+TGG - chr3_2:78444596-78444615 Msa0427780:CDS 30.0%
!!! CTATTTTTGGTCACAGTAAC+CGG + chr3_2:78437673-78437692 None:intergenic 35.0%
!!! CCTGCTTTTCTTGCTATTTT+TGG + chr3_2:78437686-78437705 None:intergenic 35.0%
CCAAAAATAGCAAGAAAAGC+AGG - chr3_2:78437683-78437702 Msa0427780:three_prime_UTR 35.0%
!!! TTGTTTTGTGAGTGTTGGTT+GGG + chr3_2:78437792-78437811 None:intergenic 35.0%
!!! TTTGTTTTGTGAGTGTTGGT+TGG + chr3_2:78437793-78437812 None:intergenic 35.0%
!!! GTGTTTTGTTTTGTGAGTGT+TGG + chr3_2:78437797-78437816 None:intergenic 35.0%
CATATACCAAAGTGAATGTG+AGG + chr3_2:78437886-78437905 None:intergenic 35.0%
CTCACATTCACTTTGGTATA+TGG - chr3_2:78437884-78437903 Msa0427780:three_prime_UTR 35.0%
ACATTCACTTTGGTATATGG+TGG - chr3_2:78437887-78437906 Msa0427780:three_prime_UTR 35.0%
!! TTTGCTGTTTGAATAAGACC+AGG + chr3_2:78438119-78438138 None:intergenic 35.0%
!! TGGTCTTATTCAAACAGCAA+AGG - chr3_2:78438118-78438137 Msa0427780:CDS 35.0%
CTTATTCAAACAGCAAAGGA+AGG - chr3_2:78438122-78438141 Msa0427780:CDS 35.0%
!! GAAACCTATGTTTTCTGGAA+TGG - chr3_2:78438161-78438180 Msa0427780:CDS 35.0%
ATGTACTTGATTCTCCGAAT+CGG - chr3_2:78438376-78438395 Msa0427780:intron 35.0%
! TTGCTGCAGAATGGAATTTT+GGG - chr3_2:78438407-78438426 Msa0427780:intron 35.0%
!!! TTTTTTTTCTAGGCTCTGGA+AGG - chr3_2:78438450-78438469 Msa0427780:intron 35.0%
CAACATAAGTGTAACTTGAG+TGG - chr3_2:78438508-78438527 Msa0427780:intron 35.0%
! AAAAACCTTTTGGGCACATA+AGG + chr3_2:78438611-78438630 None:intergenic 35.0%
! TCTCCGTCAAAAAACCTTTT+GGG + chr3_2:78438620-78438639 None:intergenic 35.0%
! ATCTCCGTCAAAAAACCTTT+TGG + chr3_2:78438621-78438640 None:intergenic 35.0%
CATTGTTAAACAAGGATGGA+TGG - chr3_2:78438645-78438664 Msa0427780:CDS 35.0%
CCATATGATACTGAACATCA+AGG + chr3_2:78438941-78438960 None:intergenic 35.0%
CCTTGATGTTCAGTATCATA+TGG - chr3_2:78438938-78438957 Msa0427780:intron 35.0%
CATAAGGTTCACTATGTATG+TGG + chr3_2:78438973-78438992 None:intergenic 35.0%
AAACTTGGTTATACTTGCCT+GGG + chr3_2:78439042-78439061 None:intergenic 35.0%
GTGACAAACTTCTACAAACT+TGG + chr3_2:78439057-78439076 None:intergenic 35.0%
GTTTGTAGAAGTTTGTCACA+TGG - chr3_2:78439058-78439077 Msa0427780:intron 35.0%
TCAGTAGCTTTCATTCCATA+CGG - chr3_2:78439103-78439122 Msa0427780:intron 35.0%
AAAAATGGTCATCTTACCAC+AGG + chr3_2:78439329-78439348 None:intergenic 35.0%
TTGAATTCAACATACCATCC+AGG + chr3_2:78439611-78439630 None:intergenic 35.0%
ATGGGAGATACATTATCACA+TGG + chr3_2:78439685-78439704 None:intergenic 35.0%
CCATCAGATAAGAGAACTAT+TGG + chr3_2:78439739-78439758 None:intergenic 35.0%
CCAATAGTTCTCTTATCTGA+TGG - chr3_2:78439736-78439755 Msa0427780:intron 35.0%
GACTAGAGACTAAACTGTTA+CGG - chr3_2:78439892-78439911 Msa0427780:intron 35.0%
! CTTTTCACTGCTATAACCTA+GGG + chr3_2:78439944-78439963 None:intergenic 35.0%
CTAGGTTATAGCAGTGAAAA+GGG - chr3_2:78439943-78439962 Msa0427780:CDS 35.0%
AACATAGTAGACAATCCCAT+AGG + chr3_2:78440040-78440059 None:intergenic 35.0%
TGGGATTGTCTACTATGTTA+AGG - chr3_2:78440041-78440060 Msa0427780:intron 35.0%
! GTTAAGGTTTAAGACTTTCG+GGG - chr3_2:78440057-78440076 Msa0427780:intron 35.0%
! TTAAGGTTTAAGACTTTCGG+GGG - chr3_2:78440058-78440077 Msa0427780:intron 35.0%
CTAGAATATGGCATACCATT+TGG + chr3_2:78440264-78440283 None:intergenic 35.0%
CACATAAGGATCATACAAAG+TGG + chr3_2:78440308-78440327 None:intergenic 35.0%
CCTTATGTGTGTTAGTATCA+CGG - chr3_2:78440319-78440338 Msa0427780:intron 35.0%
CTTATGTGTGTTAGTATCAC+GGG - chr3_2:78440320-78440339 Msa0427780:intron 35.0%
TTATGTGTGTTAGTATCACG+GGG - chr3_2:78440321-78440340 Msa0427780:intron 35.0%
AGCATCATAGTCATAACTTG+TGG + chr3_2:78440386-78440405 None:intergenic 35.0%
GACTTACCATACTCATCTAT+GGG + chr3_2:78440409-78440428 None:intergenic 35.0%
TGACTTACCATACTCATCTA+TGG + chr3_2:78440410-78440429 None:intergenic 35.0%
AAAGAAAATACCTCCACAGA+AGG + chr3_2:78440664-78440683 None:intergenic 35.0%
ATCATTTAGACCTTGTCTTG+CGG - chr3_2:78440842-78440861 Msa0427780:intron 35.0%
! TCCTCTCCTTTTCAACAATA+TGG - chr3_2:78440953-78440972 Msa0427780:intron 35.0%
ACCATATTGTTGAAAAGGAG+AGG + chr3_2:78440957-78440976 None:intergenic 35.0%
GGTCATATTACATTCAATGC+TGG + chr3_2:78441017-78441036 None:intergenic 35.0%
!! CAAAACCAGTTTGTTAAGTG+AGG - chr3_2:78441174-78441193 Msa0427780:CDS 35.0%
GCGATTAATTACTGTATTGC+AGG - chr3_2:78441251-78441270 Msa0427780:intron 35.0%
!! GATATCTATACTGACTCATC+TGG - chr3_2:78441276-78441295 Msa0427780:intron 35.0%
AACACAACATTCTTGCAATC+CGG + chr3_2:78441405-78441424 None:intergenic 35.0%
AATGGGTGAATAAGAAACAG+AGG + chr3_2:78441449-78441468 None:intergenic 35.0%
ATTCACCAAGACAAACATCA+AGG - chr3_2:78441515-78441534 Msa0427780:intron 35.0%
TGAATCCTTGATGTTTGTCT+TGG + chr3_2:78441523-78441542 None:intergenic 35.0%
GATTAGAGTGAGCAGAAAAT+AGG + chr3_2:78441798-78441817 None:intergenic 35.0%
TCATTGCAACTATGTTTGTC+GGG + chr3_2:78441939-78441958 None:intergenic 35.0%
CATTTGCAGCAATCAGATAA+AGG - chr3_2:78441967-78441986 Msa0427780:intron 35.0%
ATGTATTCAAGGAGAATCCA+GGG - chr3_2:78442010-78442029 Msa0427780:intron 35.0%
GTAACCATTGCCCAATATTA+TGG + chr3_2:78442196-78442215 None:intergenic 35.0%
! GCTTTTTACCAAAAAACCGT+TGG + chr3_2:78442249-78442268 None:intergenic 35.0%
!!! TACTCCTTAATGTTTTTGGG+TGG - chr3_2:78442291-78442310 Msa0427780:intron 35.0%
!!! ACTCCTTAATGTTTTTGGGT+GGG - chr3_2:78442292-78442311 Msa0427780:intron 35.0%
AATGAGGAGTTCCTAAAGAA+AGG - chr3_2:78442484-78442503 Msa0427780:intron 35.0%
GCAAGGGAAAGATAATACAA+AGG + chr3_2:78442712-78442731 None:intergenic 35.0%
! GGACCATTTTATGACTTCAT+AGG - chr3_2:78443190-78443209 Msa0427780:CDS 35.0%
AGAACATCTGAGTATATACC+AGG - chr3_2:78443468-78443487 Msa0427780:CDS 35.0%
GAACATCTGAGTATATACCA+GGG - chr3_2:78443469-78443488 Msa0427780:CDS 35.0%
AGCGATGACGAAAATAAGAA+AGG + chr3_2:78443574-78443593 None:intergenic 35.0%
! GAAGTATCTACGAAATTTCC+TGG - chr3_2:78443641-78443660 Msa0427780:intron 35.0%
TACAACATATCCAATCCAAC+TGG + chr3_2:78443705-78443724 None:intergenic 35.0%
! AAATTGGAAGATATTGGCCT+AGG - chr3_2:78443760-78443779 Msa0427780:intron 35.0%
AATCCAGATAAATGTGACAC+TGG - chr3_2:78443840-78443859 Msa0427780:intron 35.0%
CACAGAAATGGTAAAACTAC+TGG - chr3_2:78443877-78443896 Msa0427780:intron 35.0%
! ATGACTGTAAAAGTGTACTG+TGG + chr3_2:78444179-78444198 None:intergenic 35.0%
ATGACAAGAACATTTCCAGA+TGG + chr3_2:78444312-78444331 None:intergenic 35.0%
! TCCCTTAAGATTTTCCAGAA+GGG + chr3_2:78444398-78444417 None:intergenic 35.0%
TTCATTGATAGACCAGTACA+CGG + chr3_2:78444473-78444492 None:intergenic 35.0%
TCTATCAATGAAACTTGCAG+TGG - chr3_2:78444481-78444500 Msa0427780:intron 35.0%
!! TGTATTATTGGCTAGCTCTA+AGG - chr3_2:78444633-78444652 Msa0427780:CDS 35.0%
AACACTAACCAGTTTGAGCT+TGG - chr3_2:78437748-78437767 Msa0427780:three_prime_UTR 40.0%
AACTTCCCTCACATTCACTT+TGG - chr3_2:78437877-78437896 Msa0427780:three_prime_UTR 40.0%
! ACTTTGGTATATGGTGGTGT+CGG - chr3_2:78437893-78437912 Msa0427780:three_prime_UTR 40.0%
AACACTACGAGGGTAATGAA+TGG + chr3_2:78437987-78438006 None:intergenic 40.0%
TTTATGCTATAGATGTGGCC+TGG - chr3_2:78438098-78438117 Msa0427780:CDS 40.0%
ATTCAAACAGCAAAGGAAGG+TGG - chr3_2:78438125-78438144 Msa0427780:CDS 40.0%
ATGGCCATTCCAGAAAACAT+AGG + chr3_2:78438168-78438187 None:intergenic 40.0%
CATTTCCTGGAGAAAGTTCA+TGG + chr3_2:78438187-78438206 None:intergenic 40.0%
CTTGAACAACCTTTGCAAAC+TGG + chr3_2:78438348-78438367 None:intergenic 40.0%
TCCATTCTGCAGCAACAAAT+GGG + chr3_2:78438402-78438421 None:intergenic 40.0%
TTCCATTCTGCAGCAACAAA+TGG + chr3_2:78438403-78438422 None:intergenic 40.0%
! GTTGCTGCAGAATGGAATTT+TGG - chr3_2:78438406-78438425 Msa0427780:intron 40.0%
AGGAACTATTGTAGGAGAGA+TGG - chr3_2:78438470-78438489 Msa0427780:intron 40.0%
GATCCTTAACTCTTGCAAAG+AGG - chr3_2:78438578-78438597 Msa0427780:intron 40.0%
TCTCCTCTTTGCAAGAGTTA+AGG + chr3_2:78438584-78438603 None:intergenic 40.0%
!!! GTGCCCAAAAGGTTTTTTGA+CGG - chr3_2:78438614-78438633 Msa0427780:intron 40.0%
GGAATATAATGCAGCCATAC+TGG + chr3_2:78438773-78438792 None:intergenic 40.0%
GTATGGCTGCATTATATTCC+AGG - chr3_2:78438773-78438792 Msa0427780:CDS 40.0%
!! TAAGTTCTGAATACAGTGCC+TGG + chr3_2:78438794-78438813 None:intergenic 40.0%
CTTGCCTGGGATAAGATTAT+GGG + chr3_2:78439029-78439048 None:intergenic 40.0%
ACTTGCCTGGGATAAGATTA+TGG + chr3_2:78439030-78439049 None:intergenic 40.0%
CAAACTTGGTTATACTTGCC+TGG + chr3_2:78439043-78439062 None:intergenic 40.0%
ACTGTTGGCACATTATCCAA+GGG + chr3_2:78439292-78439311 None:intergenic 40.0%
TTGGATAATGTGCCAACAGT+GGG - chr3_2:78439292-78439311 Msa0427780:CDS 40.0%
TTGGAGAGGTAGGTGTAAAT+TGG + chr3_2:78439559-78439578 None:intergenic 40.0%
! CAGTTCTCAGTCCACATTTT+GGG + chr3_2:78439587-78439606 None:intergenic 40.0%
! CCTTTTCACTGCTATAACCT+AGG + chr3_2:78439945-78439964 None:intergenic 40.0%
CCTAGGTTATAGCAGTGAAA+AGG - chr3_2:78439942-78439961 Msa0427780:CDS 40.0%
! TAGCAGTGAAAAGGGTACAA+AGG - chr3_2:78439951-78439970 Msa0427780:CDS 40.0%
GAAAAAGCAACATCTTCTGC+TGG + chr3_2:78440100-78440119 None:intergenic 40.0%
TATTAAGGCTTCCACCTTTC+TGG + chr3_2:78440138-78440157 None:intergenic 40.0%
CCGTGATACTAACACACATA+AGG + chr3_2:78440322-78440341 None:intergenic 40.0%
TATGTGTGTTAGTATCACGG+GGG - chr3_2:78440322-78440341 Msa0427780:intron 40.0%
! TATCACGGGGGAACAAATTT+TGG - chr3_2:78440334-78440353 Msa0427780:intron 40.0%
GTTGCCTAGACTTCCAAAAT+GGG - chr3_2:78440555-78440574 Msa0427780:CDS 40.0%
TTGCCTAGACTTCCAAAATG+GGG - chr3_2:78440556-78440575 Msa0427780:CDS 40.0%
TCCAAAATGGGGACATCTTA+AGG - chr3_2:78440567-78440586 Msa0427780:intron 40.0%
! TCCTTAAGATGTCCCCATTT+TGG + chr3_2:78440571-78440590 None:intergenic 40.0%
TGTGAGCATGTATTGCTCTA+TGG - chr3_2:78440613-78440632 Msa0427780:intron 40.0%
AGCATGTATTGCTCTATGGA+AGG - chr3_2:78440617-78440636 Msa0427780:intron 40.0%
TGTATTGCTCTATGGAAGGT+CGG - chr3_2:78440621-78440640 Msa0427780:intron 40.0%
TCATTTAGACCTTGTCTTGC+GGG - chr3_2:78440843-78440862 Msa0427780:intron 40.0%
TTTGTTAAGTGAGGGATGGA+TGG - chr3_2:78441183-78441202 Msa0427780:CDS 40.0%
TTGTTAAGTGAGGGATGGAT+GGG - chr3_2:78441184-78441203 Msa0427780:CDS 40.0%
ATGGTCAGTTAGCATTCTTC+CGG - chr3_2:78441383-78441402 Msa0427780:intron 40.0%
TGTTGTGTTCAACACTGCAA+AGG - chr3_2:78441416-78441435 Msa0427780:intron 40.0%
GGAAATATGTCAGTGGGAAT+GGG + chr3_2:78441466-78441485 None:intergenic 40.0%
AGGAAATATGTCAGTGGGAA+TGG + chr3_2:78441467-78441486 None:intergenic 40.0%
ACGAATAAGTGCAAGGACTA+AGG + chr3_2:78441894-78441913 None:intergenic 40.0%
CATTGCAACTATGTTTGTCG+GGG + chr3_2:78441938-78441957 None:intergenic 40.0%
GATGTATTCAAGGAGAATCC+AGG - chr3_2:78442009-78442028 Msa0427780:intron 40.0%
! AAGGCCGACTTTGTCAAAAA+TGG - chr3_2:78442042-78442061 Msa0427780:intron 40.0%
CAGGTAATCAGTGGTATCTT+TGG + chr3_2:78442091-78442110 None:intergenic 40.0%
! AAGATACCACTGATTACCTG+TGG - chr3_2:78442091-78442110 Msa0427780:CDS 40.0%
CAGTCCATAATATTGGGCAA+TGG - chr3_2:78442189-78442208 Msa0427780:intron 40.0%
!!! AATAGTGGCCAACGGTTTTT+TGG - chr3_2:78442238-78442257 Msa0427780:intron 40.0%
GTAAAAAGCAAGTGGGTGTA+GGG - chr3_2:78442260-78442279 Msa0427780:intron 40.0%
ACACCCACCCAAAAACATTA+AGG + chr3_2:78442298-78442317 None:intergenic 40.0%
! TTCTAGCCTTTGTTTGCTTC+TGG - chr3_2:78442357-78442376 Msa0427780:CDS 40.0%
! TCTAGCCTTTGTTTGCTTCT+GGG - chr3_2:78442358-78442377 Msa0427780:CDS 40.0%
!! CTGGTTTGCTTCCTTTCTTT+AGG + chr3_2:78442498-78442517 None:intergenic 40.0%
TGAACTTAAGCATATGCCTC+CGG - chr3_2:78442669-78442688 Msa0427780:intron 40.0%
CAAAAGAAAATAGGATCCGG+AGG + chr3_2:78442688-78442707 None:intergenic 40.0%
! CTCCGGATCCTATTTTCTTT+TGG - chr3_2:78442686-78442705 Msa0427780:intron 40.0%
GGCCAAAAGAAAATAGGATC+CGG + chr3_2:78442691-78442710 None:intergenic 40.0%
GCCCCTATGAAGTCATAAAA+TGG + chr3_2:78443196-78443215 None:intergenic 40.0%
! TTTTATGACTTCATAGGGGC+AGG - chr3_2:78443196-78443215 Msa0427780:CDS 40.0%
TAGACTTGTCTTCTAATGCG+TGG - chr3_2:78443260-78443279 Msa0427780:CDS 40.0%
TTCTAATGCGTGGACATACA+AGG - chr3_2:78443270-78443289 Msa0427780:CDS 40.0%
AGAATGTGGTCAAAGGACAA+AGG + chr3_2:78443419-78443438 None:intergenic 40.0%
ACTTCTCAGATTGGAGTACA+AGG - chr3_2:78443445-78443464 Msa0427780:CDS 40.0%
TCAACTTCAGAACCACCAAA+AGG - chr3_2:78443520-78443539 Msa0427780:CDS 40.0%
CAACTTCAGAACCACCAAAA+GGG - chr3_2:78443521-78443540 Msa0427780:CDS 40.0%
!! CTTATTTTCGTCATCGCTGA+TGG - chr3_2:78443576-78443595 Msa0427780:intron 40.0%
AGCATCTACAATAGCCTGAA+AGG + chr3_2:78443667-78443686 None:intergenic 40.0%
CTATTGTAGATGCTCCATCT+GGG - chr3_2:78443673-78443692 Msa0427780:intron 40.0%
TATTGTAGATGCTCCATCTG+GGG - chr3_2:78443674-78443693 Msa0427780:CDS 40.0%
AAAGGTCTAGCCTGGTTAAA+TGG - chr3_2:78443732-78443751 Msa0427780:intron 40.0%
GTTCAAGAATGTGACTACAG+AGG - chr3_2:78443810-78443829 Msa0427780:intron 40.0%
CAACCAGTGTCACATTTATC+TGG + chr3_2:78443846-78443865 None:intergenic 40.0%
! GATAAATGTGACACTGGTTG+TGG - chr3_2:78443846-78443865 Msa0427780:intron 40.0%
! CTTGTCATCTTTGAGGAGAA+AGG - chr3_2:78444324-78444343 Msa0427780:CDS 40.0%
CTCACGAACGTAATCTTTGT+TGG + chr3_2:78444357-78444376 None:intergenic 40.0%
! TTCGTGAGACGTAAAGTATC+TGG - chr3_2:78444369-78444388 Msa0427780:CDS 40.0%
! CCCTTAAGATTTTCCAGAAG+GGG + chr3_2:78444397-78444416 None:intergenic 40.0%
! CCCCTTCTGGAAAATCTTAA+GGG - chr3_2:78444394-78444413 Msa0427780:intron 40.0%
! CTCCCTTAAGATTTTCCAGA+AGG + chr3_2:78444399-78444418 None:intergenic 40.0%
ATTTCAAAACGACCGTGTAC+TGG - chr3_2:78444458-78444477 Msa0427780:intron 40.0%
AAAATGGCTTACACACTCGA+AGG + chr3_2:78444719-78444738 None:intergenic 40.0%
TTTGGTCACAGTAACCGGTT+CGG + chr3_2:78437668-78437687 None:intergenic 45.0%
AACAAGTGCCAAGCTCAAAC+TGG + chr3_2:78437759-78437778 None:intergenic 45.0%
CAGAGATAAGAAGCTTGCGT+TGG + chr3_2:78437961-78437980 None:intergenic 45.0%
!! AGTGAAGAAGTACTGACAGC+AGG + chr3_2:78438010-78438029 None:intergenic 45.0%
AATGGCCATGAACTTTCTCC+AGG - chr3_2:78438179-78438198 Msa0427780:CDS 45.0%
GCAAAGGTTGTTCAAGATGC+TGG - chr3_2:78438352-78438371 Msa0427780:intron 45.0%
!! GCTCTGGAAGGAACTATTGT+AGG - chr3_2:78438462-78438481 Msa0427780:intron 45.0%
ATCCACCTTATGTGCCCAAA+AGG - chr3_2:78438603-78438622 Msa0427780:intron 45.0%
! AACCTTTTGGGCACATAAGG+TGG + chr3_2:78438608-78438627 None:intergenic 45.0%
! ATTGCAGTGGAGTACCAGTA+TGG - chr3_2:78438756-78438775 Msa0427780:CDS 45.0%
! AGAAGCTTTTTGCCTCCCAA+GGG - chr3_2:78439000-78439019 Msa0427780:CDS 45.0%
TAAGATTATGGGACCCCCTT+GGG + chr3_2:78439018-78439037 None:intergenic 45.0%
ATAAGATTATGGGACCCCCT+TGG + chr3_2:78439019-78439038 None:intergenic 45.0%
GGACAATGTAGACAACCGTA+TGG + chr3_2:78439121-78439140 None:intergenic 45.0%
! TGCCTTATGGGCTGCAAAAA+TGG - chr3_2:78439244-78439263 Msa0427780:CDS 45.0%
!!! AGCCATTTTTGCAGCCCATA+AGG + chr3_2:78439249-78439268 None:intergenic 45.0%
CTCAAAATACAAGCGTCCCT+TGG - chr3_2:78439273-78439292 Msa0427780:CDS 45.0%
CACTGTTGGCACATTATCCA+AGG + chr3_2:78439293-78439312 None:intergenic 45.0%
CTTGGATAATGTGCCAACAG+TGG - chr3_2:78439291-78439310 Msa0427780:CDS 45.0%
TTACACCTACCTCTCCAAAG+AGG - chr3_2:78439561-78439580 Msa0427780:intron 45.0%
! CCAGTTCTCAGTCCACATTT+TGG + chr3_2:78439588-78439607 None:intergenic 45.0%
! CCAAAATGTGGACTGAGAAC+TGG - chr3_2:78439585-78439604 Msa0427780:intron 45.0%
AATGTATCTCCCATGACTCG+TGG - chr3_2:78439691-78439710 Msa0427780:intron 45.0%
ATGTATCTCCCATGACTCGT+GGG - chr3_2:78439692-78439711 Msa0427780:intron 45.0%
TCACTGCTATAACCTAGGGA+GGG + chr3_2:78439940-78439959 None:intergenic 45.0%
TTCACTGCTATAACCTAGGG+AGG + chr3_2:78439941-78439960 None:intergenic 45.0%
GTTGCTCGTTTCTTCCAGAA+AGG - chr3_2:78440121-78440140 Msa0427780:intron 45.0%
!! ACAAATTTTGGCCGTACAGC+CGG - chr3_2:78440346-78440365 Msa0427780:intron 45.0%
! TGTGGTAATGAATGGACCAC+CGG + chr3_2:78440368-78440387 None:intergenic 45.0%
GATGCTCCCATAGATGAGTA+TGG - chr3_2:78440400-78440419 Msa0427780:CDS 45.0%
GGTTGCCTAGACTTCCAAAA+TGG - chr3_2:78440554-78440573 Msa0427780:CDS 45.0%
!! TGTCCCCATTTTGGAAGTCT+AGG + chr3_2:78440562-78440581 None:intergenic 45.0%
AGGTCGGTTAATATCTCCCT+TGG - chr3_2:78440637-78440656 Msa0427780:intron 45.0%
CATTTAGACCTTGTCTTGCG+GGG - chr3_2:78440844-78440863 Msa0427780:intron 45.0%
ATTTAGACCTTGTCTTGCGG+GGG - chr3_2:78440845-78440864 Msa0427780:intron 45.0%
GCCATGTTACATCCAATGTG+AGG - chr3_2:78441091-78441110 Msa0427780:CDS 45.0%
GCCTCACATTGGATGTAACA+TGG + chr3_2:78441095-78441114 None:intergenic 45.0%
CCATCCCTCACTTAACAAAC+TGG + chr3_2:78441182-78441201 None:intergenic 45.0%
!! CCAGTTTGTTAAGTGAGGGA+TGG - chr3_2:78441179-78441198 Msa0427780:CDS 45.0%
AGAATGCTAACTGACCATGC+TGG + chr3_2:78441381-78441400 None:intergenic 45.0%
GTGTTCAACACTGCAAAGGT+CGG - chr3_2:78441420-78441439 Msa0427780:intron 45.0%
TCTGATTGCTGCAAATGCTC+TGG + chr3_2:78441964-78441983 None:intergenic 45.0%
ATTACCTGTGGCATACGACA+AGG - chr3_2:78442103-78442122 Msa0427780:CDS 45.0%
GGTAAAAAGCAAGTGGGTGT+AGG - chr3_2:78442259-78442278 Msa0427780:intron 45.0%
! CTAGCCTTTGTTTGCTTCTG+GGG - chr3_2:78442359-78442378 Msa0427780:CDS 45.0%
TTCACCCCAGAAGCAAACAA+AGG + chr3_2:78442366-78442385 None:intergenic 45.0%
!! CATCTTCTAGGTACTGGAAC+TGG - chr3_2:78442931-78442950 Msa0427780:CDS 45.0%
!! CTAGGTACTGGAACTGGAAA+TGG - chr3_2:78442937-78442956 Msa0427780:CDS 45.0%
TTAAGAACCCCATCTCTCTC+AGG - chr3_2:78442980-78442999 Msa0427780:intron 45.0%
TAAGAACCCCATCTCTCTCA+GGG - chr3_2:78442981-78443000 Msa0427780:intron 45.0%
GCTATATTGAGCTTGACCGT+TGG - chr3_2:78443021-78443040 Msa0427780:intron 45.0%
TCTGAGTATATACCAGGGAG+AGG - chr3_2:78443474-78443493 Msa0427780:CDS 45.0%
CTGAGTATATACCAGGGAGA+GGG - chr3_2:78443475-78443494 Msa0427780:CDS 45.0%
TGAGTATATACCAGGGAGAG+GGG - chr3_2:78443476-78443495 Msa0427780:CDS 45.0%
AGGGGATGAATAGTGTGAAG+TGG - chr3_2:78443494-78443513 Msa0427780:CDS 45.0%
! ACGAAATTTCCTGGCCTTTC+AGG - chr3_2:78443650-78443669 Msa0427780:intron 45.0%
GCTATTGTAGATGCTCCATC+TGG - chr3_2:78443672-78443691 Msa0427780:intron 45.0%
ATATGGGAAAAGGTCTAGCC+TGG - chr3_2:78443724-78443743 Msa0427780:intron 45.0%
GATGCAGGATAGATCCTTCA+TGG - chr3_2:78444058-78444077 Msa0427780:intron 45.0%
AGATCGTGGAACATGATACC+TGG + chr3_2:78444280-78444299 None:intergenic 45.0%
GGTATCATGTTCCACGATCT+TGG - chr3_2:78444280-78444299 Msa0427780:intron 45.0%
! GTCATCTTTGAGGAGAAAGG+TGG - chr3_2:78444327-78444346 Msa0427780:CDS 45.0%
! GCCCCTTCTGGAAAATCTTA+AGG - chr3_2:78444393-78444412 Msa0427780:intron 45.0%
! CACCAGTTGATTTACCAGCT+TGG - chr3_2:78444567-78444586 Msa0427780:CDS 45.0%
AGCCAAGCTGGTAAATCAAC+TGG + chr3_2:78444572-78444591 None:intergenic 45.0%
!!! AATATTATTTTTTTTTTTCT+AGG - chr3_2:78438440-78438459 Msa0427780:intron 5.0%
!! ATATTAAATTTAATACTAAA+GGG - chr3_2:78441818-78441837 Msa0427780:intron 5.0%
!!! TTTATTTTATACATTTTTTT+AGG + chr3_2:78442836-78442855 None:intergenic 5.0%
GGTAGTAACGTCAGCTACGA+CGG - chr3_2:78437914-78437933 Msa0427780:three_prime_UTR 50.0%
GGTCGCTCACTCATCATTGA+TGG - chr3_2:78437935-78437954 Msa0427780:three_prime_UTR 50.0%
TGACAGCAGGAACACTACGA+GGG + chr3_2:78437997-78438016 None:intergenic 50.0%
! CTTTGGAGGACGATTCGATC+TGG - chr3_2:78438321-78438340 Msa0427780:intron 50.0%
CGATCTGGTCCAGTTTGCAA+AGG - chr3_2:78438336-78438355 Msa0427780:intron 50.0%
CAGCAACAAATGGGCCGATT+CGG + chr3_2:78438393-78438412 None:intergenic 50.0%
! GCCCATTTGTTGCTGCAGAA+TGG - chr3_2:78438398-78438417 Msa0427780:intron 50.0%
! ACTTGAGTGGTTAGTCCGAG+TGG - chr3_2:78438521-78438540 Msa0427780:intron 50.0%
AGTCCGAGTGGTAAGAGACT+CGG - chr3_2:78438533-78438552 Msa0427780:intron 50.0%
! GAGAAGCTTTTTGCCTCCCA+AGG - chr3_2:78438999-78439018 Msa0427780:CDS 50.0%
! GAAGCTTTTTGCCTCCCAAG+GGG - chr3_2:78439001-78439020 Msa0427780:CDS 50.0%
! AAGCTTTTTGCCTCCCAAGG+GGG - chr3_2:78439002-78439021 Msa0427780:CDS 50.0%
GGGTCCCATAATCTTATCCC+AGG - chr3_2:78439022-78439041 Msa0427780:CDS 50.0%
GGTCATCTTACCACAGGATC+TGG + chr3_2:78439323-78439342 None:intergenic 50.0%
!! CATTTTGGGCCTCTTTGGAG+AGG + chr3_2:78439573-78439592 None:intergenic 50.0%
CTCCAAAGAGGCCCAAAATG+TGG - chr3_2:78439573-78439592 Msa0427780:intron 50.0%
! GTCCACATTTTGGGCCTCTT+TGG + chr3_2:78439578-78439597 None:intergenic 50.0%
TGTATCTCCCATGACTCGTG+GGG - chr3_2:78439693-78439712 Msa0427780:intron 50.0%
TAAGTACCCCCACGAGTCAT+GGG + chr3_2:78439703-78439722 None:intergenic 50.0%
ATAAGTACCCCCACGAGTCA+TGG + chr3_2:78439704-78439723 None:intergenic 50.0%
!! ATGACTCGTGGGGGTACTTA+TGG - chr3_2:78439703-78439722 Msa0427780:intron 50.0%
ACTGCTATAACCTAGGGAGG+GGG + chr3_2:78439938-78439957 None:intergenic 50.0%
CACTGCTATAACCTAGGGAG+GGG + chr3_2:78439939-78439958 None:intergenic 50.0%
GCTCGTTTCTTCCAGAAAGG+TGG - chr3_2:78440124-78440143 Msa0427780:intron 50.0%
TATCTCCCTTGGTCCTTCTG+TGG - chr3_2:78440648-78440667 Msa0427780:intron 50.0%
TACCTCCACAGAAGGACCAA+GGG + chr3_2:78440656-78440675 None:intergenic 50.0%
ATACCTCCACAGAAGGACCA+AGG + chr3_2:78440657-78440676 None:intergenic 50.0%
GTGTGTTGAGAGCCTCACAT+TGG + chr3_2:78441106-78441125 None:intergenic 50.0%
GTATCAGACTCTTGTGCGTG+AGG + chr3_2:78441130-78441149 None:intergenic 50.0%
AGTGAGGGATGGATGGGAAA+AGG - chr3_2:78441190-78441209 Msa0427780:CDS 50.0%
TCAAGGAGAATCCAGGGATC+TGG - chr3_2:78442016-78442035 Msa0427780:intron 50.0%
CAAGGAGAATCCAGGGATCT+GGG - chr3_2:78442017-78442036 Msa0427780:intron 50.0%
AAGGAGAATCCAGGGATCTG+GGG - chr3_2:78442018-78442037 Msa0427780:intron 50.0%
CGTATGCCACAGGTAATCAG+TGG + chr3_2:78442100-78442119 None:intergenic 50.0%
CAAACCTTGTCGTATGCCAC+AGG + chr3_2:78442110-78442129 None:intergenic 50.0%
! AGCATGGAGAGTATGACCCT+TGG + chr3_2:78442536-78442555 None:intergenic 50.0%
TTCAGAACCACCAAAAGGGC+AGG - chr3_2:78443525-78443544 Msa0427780:CDS 50.0%
! CATGTCAATGCCTGCCCTTT+TGG + chr3_2:78443538-78443557 None:intergenic 50.0%
!! CAAAAGGGCAGGCATTGACA+TGG - chr3_2:78443536-78443555 Msa0427780:intron 50.0%
!! GCAGGCATTGACATGGTACA+AGG - chr3_2:78443543-78443562 Msa0427780:intron 50.0%
CTACAATAGCCTGAAAGGCC+AGG + chr3_2:78443662-78443681 None:intergenic 50.0%
TGGGGATGAACCAGTTGGAT+TGG - chr3_2:78443692-78443711 Msa0427780:CDS 50.0%
GTGGAGAGCCTTCACAGAAA+TGG - chr3_2:78443865-78443884 Msa0427780:intron 50.0%
GATGGCTTGAACCAAGATCG+TGG + chr3_2:78444294-78444313 None:intergenic 50.0%
CGATCTTGGTTCAAGCCATC+TGG - chr3_2:78444294-78444313 Msa0427780:intron 50.0%
! AAAGTATCTGGAGCCCCTTC+TGG - chr3_2:78444381-78444400 Msa0427780:intron 50.0%
CTTCTTTGATGCAGCCAAGC+TGG + chr3_2:78444584-78444603 None:intergenic 50.0%
CTGACAGCAGGAACACTACG+AGG + chr3_2:78437998-78438017 None:intergenic 55.0%
GTCCGAGTGGTAAGAGACTC+GGG - chr3_2:78438534-78438553 Msa0427780:intron 55.0%
TGCCCGAGTCTCTTACCACT+CGG + chr3_2:78438539-78438558 None:intergenic 55.0%
! GATCTGGAGCATCCCACTGT+TGG + chr3_2:78439307-78439326 None:intergenic 55.0%
! TTGGGCCTCTTTGGAGAGGT+AGG + chr3_2:78439569-78439588 None:intergenic 55.0%
! ATGTGGACTGAGAACTGGCC+TGG - chr3_2:78439590-78439609 Msa0427780:intron 55.0%
GTATCTCCCATGACTCGTGG+GGG - chr3_2:78439694-78439713 Msa0427780:intron 55.0%
AACCTAGGGAGGGGGAAGAT+GGG + chr3_2:78439930-78439949 None:intergenic 55.0%
TAACCTAGGGAGGGGGAAGA+TGG + chr3_2:78439931-78439950 None:intergenic 55.0%
! ACATCTTCTGCTGGCCTGTG+AGG + chr3_2:78440091-78440110 None:intergenic 55.0%
!! AATTTTGGCCGTACAGCCGG+TGG - chr3_2:78440349-78440368 Msa0427780:intron 55.0%
! TGAATGGACCACCGGCTGTA+CGG + chr3_2:78440360-78440379 None:intergenic 55.0%
TGGAAGTCTAGGCAACCCTG+TGG + chr3_2:78440551-78440570 None:intergenic 55.0%
AGGATTTCCCCCGCAAGACA+AGG + chr3_2:78440855-78440874 None:intergenic 55.0%
CATCGTATCACCTGCCAGCA+TGG - chr3_2:78441364-78441383 Msa0427780:intron 55.0%
TGCTAACTGACCATGCTGGC+AGG + chr3_2:78441377-78441396 None:intergenic 55.0%
AGGAGAATCCAGGGATCTGG+GGG - chr3_2:78442019-78442038 Msa0427780:intron 55.0%
TTCCCAGCCCTGAGAGAGAT+GGG + chr3_2:78442991-78443010 None:intergenic 55.0%
GCAAGTCACCTGCAAGCCAA+CGG + chr3_2:78443040-78443059 None:intergenic 55.0%
CACTATTCATCCCCTCTCCC+TGG + chr3_2:78443489-78443508 None:intergenic 55.0%
! GTCAATGCCTGCCCTTTTGG+TGG + chr3_2:78443535-78443554 None:intergenic 55.0%
! CCAACTGGTTCATCCCCAGA+TGG + chr3_2:78443690-78443709 None:intergenic 55.0%
CCATCTGGGGATGAACCAGT+TGG - chr3_2:78443687-78443706 Msa0427780:CDS 55.0%
GATTATGGGACCCCCTTGGG+AGG + chr3_2:78439015-78439034 None:intergenic 60.0%
GTGGGATGCTCCAGATCCTG+TGG - chr3_2:78439310-78439329 Msa0427780:intron 60.0%
! GGACTGAGAACTGGCCTGGA+TGG - chr3_2:78439594-78439613 Msa0427780:intron 60.0%
TACCCATCTTCCCCCTCCCT+AGG - chr3_2:78439925-78439944 Msa0427780:intron 60.0%
CTCCCTTGGTCCTTCTGTGG+AGG - chr3_2:78440651-78440670 Msa0427780:intron 60.0%
GAATCCAGGGATCTGGGGGA+AGG - chr3_2:78442023-78442042 Msa0427780:intron 60.0%
AACCCCATCTCTCTCAGGGC+TGG - chr3_2:78442985-78443004 Msa0427780:intron 60.0%
ACCCCATCTCTCTCAGGGCT+GGG - chr3_2:78442986-78443005 Msa0427780:intron 60.0%
TCCCAGCCCTGAGAGAGATG+GGG + chr3_2:78442990-78443009 None:intergenic 60.0%
CTTCCCAGCCCTGAGAGAGA+TGG + chr3_2:78442992-78443011 None:intergenic 60.0%
!! GAGCTTGACCGTTGGCTTGC+AGG - chr3_2:78443029-78443048 Msa0427780:intron 60.0%
TCGGGGGCAGAGATCCTCAC+AGG - chr3_2:78440074-78440093 Msa0427780:intron 65.0%
TCGGCCTTCCCCCAGATCCC+TGG + chr3_2:78442030-78442049 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 78437652 78444851 78437652 ID=Msa0427780;Name=Msa0427780
chr3_2 mRNA 78437652 78444851 78437652 ID=Msa0427780-mRNA-1;Parent=Msa0427780;Name=Msa0427780-mRNA-1;_AED=0.05;_eAED=0.05;_QI=187|0.94|0.94|1|1|1|18|438|753
chr3_2 exon 78437652 78438222 78437652 ID=Msa0427780-mRNA-1:exon:20762;Parent=Msa0427780-mRNA-1
chr3_2 exon 78438617 78438831 78438617 ID=Msa0427780-mRNA-1:exon:20761;Parent=Msa0427780-mRNA-1
chr3_2 exon 78438939 78439049 78438939 ID=Msa0427780-mRNA-1:exon:20760;Parent=Msa0427780-mRNA-1
chr3_2 exon 78439212 78439319 78439212 ID=Msa0427780-mRNA-1:exon:20759;Parent=Msa0427780-mRNA-1
chr3_2 exon 78439453 78439562 78439453 ID=Msa0427780-mRNA-1:exon:20758;Parent=Msa0427780-mRNA-1
chr3_2 exon 78439926 78440035 78439926 ID=Msa0427780-mRNA-1:exon:20757;Parent=Msa0427780-mRNA-1
chr3_2 exon 78440379 78440575 78440379 ID=Msa0427780-mRNA-1:exon:20756;Parent=Msa0427780-mRNA-1
chr3_2 exon 78441066 78441230 78441066 ID=Msa0427780-mRNA-1:exon:20755;Parent=Msa0427780-mRNA-1
chr3_2 exon 78441831 78441949 78441831 ID=Msa0427780-mRNA-1:exon:20754;Parent=Msa0427780-mRNA-1
chr3_2 exon 78442082 78442169 78442082 ID=Msa0427780-mRNA-1:exon:20753;Parent=Msa0427780-mRNA-1
chr3_2 exon 78442335 78442440 78442335 ID=Msa0427780-mRNA-1:exon:20752;Parent=Msa0427780-mRNA-1
chr3_2 exon 78442888 78442976 78442888 ID=Msa0427780-mRNA-1:exon:20751;Parent=Msa0427780-mRNA-1
chr3_2 exon 78443172 78443315 78443172 ID=Msa0427780-mRNA-1:exon:20750;Parent=Msa0427780-mRNA-1
chr3_2 exon 78443436 78443552 78443436 ID=Msa0427780-mRNA-1:exon:20749;Parent=Msa0427780-mRNA-1
chr3_2 exon 78443674 78443740 78443674 ID=Msa0427780-mRNA-1:exon:20748;Parent=Msa0427780-mRNA-1
chr3_2 exon 78444075 78444187 78444075 ID=Msa0427780-mRNA-1:exon:20747;Parent=Msa0427780-mRNA-1
chr3_2 exon 78444298 78444393 78444298 ID=Msa0427780-mRNA-1:exon:20746;Parent=Msa0427780-mRNA-1
chr3_2 exon 78444491 78444851 78444491 ID=Msa0427780-mRNA-1:exon:20745;Parent=Msa0427780-mRNA-1
chr3_2 five_prime_UTR 78444665 78444851 78444665 ID=Msa0427780-mRNA-1:five_prime_utr;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78444491 78444664 78444491 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78444298 78444393 78444298 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78444075 78444187 78444075 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78443674 78443740 78443674 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78443436 78443552 78443436 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78443172 78443315 78443172 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78442888 78442976 78442888 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78442335 78442440 78442335 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78442082 78442169 78442082 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78441831 78441949 78441831 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78441066 78441230 78441066 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78440379 78440575 78440379 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78439926 78440035 78439926 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78439453 78439562 78439453 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78439212 78439319 78439212 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78438939 78439049 78438939 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78438617 78438831 78438617 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 CDS 78438090 78438222 78438090 ID=Msa0427780-mRNA-1:cds;Parent=Msa0427780-mRNA-1
chr3_2 three_prime_UTR 78437652 78438089 78437652 ID=Msa0427780-mRNA-1:three_prime_utr;Parent=Msa0427780-mRNA-1
Gene Sequence

>Msa0427780

ATGAAAATGAACTTGTGTTTCTTTTTGTGTTTGGTTTCAACTTCCCTCACATTCACTTTGGTATATGGTGGTGTCGGTAGTAACGTCAGCTACGACGGTCGCTCACTCATCATTGATGGCCAACGCAAGCTTCTTATCTCTGCTTCCATTCATTACCCTCGTAGTGTTCCTGCTATGTGGCCTGGTCTTATTCAAACAGCAAAGGAAGGTGGAATAGATGTCATTGAAACCTATGTTTTCTGGAATGGCCATGAACTTTCTCCAGGAAATTATTACTTTGGAGGACGATTCGATCTGGTCCAGTTTGCAAAGGTTGTTCAAGATGCTGGAATGTACTTGATTCTCCGAATCGGCCCATTTGTTGCTGCAGAATGGAATTTTGGTGGAGTACCAGTATGGCTGCATTATATTCCAGGCACTGTATTCAGAACTTACAATCAGCCTTTTATGTATCATATGGAGAAATTTACCACATACATAGTGAACCTTATGAAGAAAGAGAAGCTTTTTGCCTCCCAAGGGGGTCCCATAATCTTATCCCAGGCAAGTATAACCAAGTTTGTAGAAATAGAAAATGAATATGGATACTACGAAAACTATTATAAAGAGGATGGTAAGAAATATGCCTTATGGGCTGCAAAAATGGCTGTTTCTCAAAATACAAGCGTCCCTTGGATAATGTGCCAACAGTGGGATGCTCCAGATCCTGTGATTGATACTTGCAACTCATTCTACTGTGACCAATTTACACCTACCTCTCCAAAGAGGCCCAAAATGTGGACTGAGAACTGGCCTGGATGGTTTAAGACTTTCGGGGGCAGAGATCCTCACAGGCCAGCAGAAGATGTTGCTTTTTCTGTTGCTCGTTTCTTCCAGAAAGGTGGAAGCCTTAATAATTACTACATGTATCACGGGGGAACAAATTTTGGCCGTACAGCCGGTGGTCCATTCATTACCACAAGTTATGACTATGATGCTCCCATAGATGAGTATGGGTTGCCTAGACTTCCAAAATGGGGACATCTTAAGGAACTTCACAAAGCTATTAAGCTATGTGAGCATGTATTGCTCTATGGAAGGTCGGTTAATATCTCCCTTGGTCCTTCTGTGGAGGCTGATATCTATACTGACTCATCTGGAGCATGTGCCGCCTTTATTTCTAACGTTGATGATAAAAATGATAAGACAGTGGTATTTCGGAATGCATCGTATCACCTGCCAGCATGGTCAGTTAGCATTCTTCCGGATTGCAAGAATGTTGTGTTCAACACTGCAAAGGTTTCTTCCCCGACAAACATAGTTGCAATGATTCCAGAGCATTTGCAGCAATCAGATAAAGGTCAAAAAACACTTAAATGGGATGTATTCAAGGAGAATCCAGGGATCTGGGGGAAGGCCGACTTTGTCAAAAATGGCTTTGTCGACCACATCAATACTACCAAAGATACCACTGATTACCTGTGGCATACGACAAGCATACTTATTGATGCAAATGAGGAGTTCCTAAAGAAAGGAAGCAAACCAGCTCTTTTAATAGAATCCAAGGGTCATACTCTCCATGCTTTTGTGAATCAGAAATATCAAGGTACTGGAACTGGAAATGGTTCACATTCAGCATTTACTTTTAAGAACCCCATCTCTCTCAGGGCTGGGAAGAATGAAATCGCTATATTGAGCTTGACCGTTGGCTTGCAGACTGCTGGACCATTTTATGACTTCATAGGGGCAGGAGTAACAAGTGTTAAGATTATTGGACTCAACAATAAGACGATAGACTTGTCTTCTAATGCGTGGACATACAAGATTGGAGTACAAGGAGAACATCTGAGTATATACCAGGGAGAGGGGATGAATAGTGTGAAGTGGACATCAACTTCAGAACCACCAAAAGGGCAGGCATTGACATGGTACAAGGCTATTGTAGATGCTCCATCTGGGGATGAACCAGTTGGATTGGATATGTTGTATATGGGAAAAGGTCTAGCCTGGTTAAATGGAGAAGAAATTGGAAGATATTGGCCTAGGATAAGTGAATTTAAGAAGGAAGACTGTGTTCAAGAATGTGACTACAGAGGCAAATTCAATCCAGATAAATGTGACACTGGTTGTGGAGAGCCTTCACAGAAATGGTATCATGTTCCACGATCTTGGTTCAAGCCATCTGGAAATGTTCTTGTCATCTTTGAGGAGAAAGGTGGTGATCCAACAAAGATTACGTTCGTGAGACGTAAAGTATCTGGAGCCCCTTCTGGAAAATCTTAA
Protein sequence

>Msa0427780

MKMNLCFFLCLVSTSLTFTLVYGGVGSNVSYDGRSLIIDGQRKLLISASIHYPRSVPAMWPGLIQTAKEGGIDVIETYVFWNGHELSPGNYYFGGRFDLVQFAKVVQDAGMYLILRIGPFVAAEWNFGGVPVWLHYIPGTVFRTYNQPFMYHMEKFTTYIVNLMKKEKLFASQGGPIILSQASITKFVEIENEYGYYENYYKEDGKKYALWAAKMAVSQNTSVPWIMCQQWDAPDPVIDTCNSFYCDQFTPTSPKRPKMWTENWPGWFKTFGGRDPHRPAEDVAFSVARFFQKGGSLNNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPRLPKWGHLKELHKAIKLCEHVLLYGRSVNISLGPSVEADIYTDSSGACAAFISNVDDKNDKTVVFRNASYHLPAWSVSILPDCKNVVFNTAKVSSPTNIVAMIPEHLQQSDKGQKTLKWDVFKENPGIWGKADFVKNGFVDHINTTKDTTDYLWHTTSILIDANEEFLKKGSKPALLIESKGHTLHAFVNQKYQGTGTGNGSHSAFTFKNPISLRAGKNEIAILSLTVGLQTAGPFYDFIGAGVTSVKIIGLNNKTIDLSSNAWTYKIGVQGEHLSIYQGEGMNSVKWTSTSEPPKGQALTWYKAIVDAPSGDEPVGLDMLYMGKGLAWLNGEEIGRYWPRISEFKKEDCVQECDYRGKFNPDKCDTGCGEPSQKWYHVPRSWFKPSGNVLVIFEEKGGDPTKITFVRRKVSGAPSGKS*