Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391480 | XP_003630218.2 | 95.738 | 305 | 11 | 1 | 1 | 305 | 1 | 303 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391480 | sp|Q9ASQ2|MAMYB_ARATH | 51.553 | 322 | 119 | 10 | 1 | 301 | 1 | 306 | 1.57e-81 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391480 | A0A0C3Y601 | 95.738 | 305 | 11 | 1 | 1 | 305 | 1 | 303 | 0.0 | 587 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1391480 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa1391480 | 0.809342 | 1.983926e-50 | -8.615850e-47 |
| Msa0012940 | Msa1391480 | 0.826793 | 2.231934e-54 | -8.615850e-47 |
| Msa0016540 | Msa1391480 | 0.821216 | 4.542162e-53 | -8.615850e-47 |
| Msa0029630 | Msa1391480 | 0.836273 | 1.030630e-56 | -8.615850e-47 |
| Msa0032020 | Msa1391480 | 0.800982 | 1.116248e-48 | -8.615850e-47 |
| Msa0033880 | Msa1391480 | 0.842218 | 2.957734e-58 | -8.615850e-47 |
| Msa0041690 | Msa1391480 | 0.821049 | 4.964328e-53 | -8.615850e-47 |
| Msa0047640 | Msa1391480 | 0.806573 | 7.705208e-50 | -8.615850e-47 |
| Msa0077900 | Msa1391480 | 0.817375 | 3.407140e-52 | -8.615850e-47 |
| Msa0079920 | Msa1391480 | 0.821911 | 3.138487e-53 | -8.615850e-47 |
| Msa0080730 | Msa1391480 | 0.803685 | 3.098627e-49 | -8.615850e-47 |
| Msa0093850 | Msa1391480 | 0.813833 | 2.094874e-51 | -8.615850e-47 |
| Msa0106620 | Msa1391480 | 0.811769 | 5.931546e-51 | -8.615850e-47 |
| Msa0106710 | Msa1391480 | 0.802633 | 5.114026e-49 | -8.615850e-47 |
| Msa0115370 | Msa1391480 | 0.802593 | 5.212856e-49 | -8.615850e-47 |
| Msa0119900 | Msa1391480 | 0.800580 | 1.348236e-48 | -8.615850e-47 |
| Msa1351540 | Msa1391480 | 0.828284 | 9.792942e-55 | -8.615850e-47 |
| Msa1356610 | Msa1391480 | 0.836662 | 8.204387e-57 | -8.615850e-47 |
| Msa1364160 | Msa1391480 | 0.822240 | 2.632942e-53 | -8.615850e-47 |
| Msa1366390 | Msa1391480 | 0.800448 | 1.434554e-48 | -8.615850e-47 |
| Msa1373170 | Msa1391480 | 0.809826 | 1.561841e-50 | -8.615850e-47 |
| Msa1373820 | Msa1391480 | 0.820799 | 5.665618e-53 | -8.615850e-47 |
| Msa1374170 | Msa1391480 | 0.817695 | 2.886024e-52 | -8.615850e-47 |
| Msa1382670 | Msa1391480 | 0.817856 | 2.654101e-52 | -8.615850e-47 |
| Msa1391480 | Msa1398790 | 0.996321 | 4.636112e-226 | -8.615850e-47 |
| Msa1391480 | Msa1400820 | 0.805740 | 1.153588e-49 | -8.615850e-47 |
| Msa1391480 | Msa1403570 | 0.825427 | 4.716518e-54 | -8.615850e-47 |
| Msa1391480 | Msa1409950 | 0.809125 | 2.208224e-50 | -8.615850e-47 |
| Msa1391480 | Msa1411500 | 0.808173 | 3.526701e-50 | -8.615850e-47 |
| Msa1391480 | Msa1411950 | 0.836960 | 6.889945e-57 | -8.615850e-47 |
| Msa1391480 | Msa1418240 | 0.813968 | 1.956381e-51 | -8.615850e-47 |
| Msa1391480 | Msa1418500 | 0.822718 | 2.039485e-53 | -8.615850e-47 |
| Msa1391480 | Msa1421560 | 0.829017 | 6.511041e-55 | -8.615850e-47 |
| Msa1391480 | Msa1427160 | 0.816813 | 4.556504e-52 | -8.615850e-47 |
| Msa1391480 | Msa1432480 | 0.821235 | 4.496835e-53 | -8.615850e-47 |
| Msa1391480 | Msa1433870 | 0.814518 | 1.479179e-51 | -8.615850e-47 |
| Msa1391480 | Msa1435440 | 0.808293 | 3.325608e-50 | -8.615850e-47 |
| Msa1391480 | Msa1450720 | 0.827373 | 1.622024e-54 | -8.615850e-47 |
| Msa1391480 | Msa1454680 | 0.807908 | 4.017318e-50 | -8.615850e-47 |
| Msa1391480 | Msa1459910 | 0.823359 | 1.445532e-53 | -8.615850e-47 |
| Msa1391480 | Msa1459960 | 0.853415 | 2.426621e-61 | -8.615850e-47 |
| Msa1391480 | Msa1462910 | 0.834375 | 3.108175e-56 | -8.615850e-47 |
| Msa0610090 | Msa1391480 | 0.841843 | 3.716033e-58 | -8.615850e-47 |
| Msa0615580 | Msa1391480 | 0.822045 | 2.922194e-53 | -8.615850e-47 |
| Msa0619420 | Msa1391480 | 0.809265 | 2.060881e-50 | -8.615850e-47 |
| Msa0628420 | Msa1391480 | 0.817995 | 2.469576e-52 | -8.615850e-47 |
| Msa0633570 | Msa1391480 | 0.846878 | 1.647092e-59 | -8.615850e-47 |
| Msa0642970 | Msa1391480 | 0.800192 | 1.617205e-48 | -8.615850e-47 |
| Msa0644030 | Msa1391480 | 0.866052 | 3.779869e-65 | -8.615850e-47 |
| Msa0656810 | Msa1391480 | 0.851351 | 9.389994e-61 | -8.615850e-47 |
| Msa0658480 | Msa1391480 | 0.850375 | 1.768538e-60 | -8.615850e-47 |
| Msa0659550 | Msa1391480 | 0.821455 | 4.002062e-53 | -8.615850e-47 |
| Msa0662630 | Msa1391480 | 0.808749 | 2.658108e-50 | -8.615850e-47 |
| Msa0662890 | Msa1391480 | 0.821512 | 3.882455e-53 | -8.615850e-47 |
| Msa0666230 | Msa1391480 | 0.821249 | 4.463880e-53 | -8.615850e-47 |
| Msa0669180 | Msa1391480 | 0.809702 | 1.660269e-50 | -8.615850e-47 |
| Msa0687230 | Msa1391480 | 0.810055 | 1.394100e-50 | -8.615850e-47 |
| Msa0689440 | Msa1391480 | 0.806080 | 9.785025e-50 | -8.615850e-47 |
| Msa0698100 | Msa1391480 | 0.815561 | 8.678265e-52 | -8.615850e-47 |
| Msa0712560 | Msa1391480 | 0.811924 | 5.488331e-51 | -8.615850e-47 |
| Msa0713340 | Msa1391480 | 0.800478 | 1.414176e-48 | -8.615850e-47 |
| Msa0716410 | Msa1391480 | 0.802593 | 5.212856e-49 | -8.615850e-47 |
| Msa0743530 | Msa1391480 | 0.806681 | 7.310020e-50 | -8.615850e-47 |
| Msa0744100 | Msa1391480 | 0.815493 | 8.986123e-52 | -8.615850e-47 |
| Msa0785130 | Msa1391480 | 0.802819 | 4.680490e-49 | -8.615850e-47 |
| Msa0794050 | Msa1391480 | 0.805107 | 1.566228e-49 | -8.615850e-47 |
| Msa0818770 | Msa1391480 | 0.816731 | 4.753287e-52 | -8.615850e-47 |
| Msa0819540 | Msa1391480 | 0.801051 | 1.080447e-48 | -8.615850e-47 |
| Msa0822170 | Msa1391480 | 0.812217 | 4.736571e-51 | -8.615850e-47 |
| Msa0822180 | Msa1391480 | 0.802894 | 4.517969e-49 | -8.615850e-47 |
| Msa0825270 | Msa1391480 | 0.828937 | 6.810433e-55 | -8.615850e-47 |
| Msa0826510 | Msa1391480 | 0.825684 | 4.099617e-54 | -8.615850e-47 |
| Msa0831100 | Msa1391480 | 0.806306 | 8.771816e-50 | -8.615850e-47 |
| Msa0833190 | Msa1391480 | -0.812173 | 4.842631e-51 | -8.615850e-47 |
| Msa0123510 | Msa1391480 | 0.816148 | 6.419844e-52 | -8.615850e-47 |
| Msa0125450 | Msa1391480 | 0.825294 | 5.068939e-54 | -8.615850e-47 |
| Msa0125540 | Msa1391480 | 0.805347 | 1.394710e-49 | -8.615850e-47 |
| Msa0127040 | Msa1391480 | 0.816370 | 5.727442e-52 | -8.615850e-47 |
| Msa0127850 | Msa1391480 | 0.845331 | 4.340905e-59 | -8.615850e-47 |
| Msa0136120 | Msa1391480 | 0.814969 | 1.174878e-51 | -8.615850e-47 |
| Msa0138360 | Msa1391480 | 0.810833 | 9.467667e-51 | -8.615850e-47 |
| Msa0141400 | Msa1391480 | 0.810922 | 9.060643e-51 | -8.615850e-47 |
| Msa0142110 | Msa1391480 | 0.835146 | 1.988627e-56 | -8.615850e-47 |
| Msa0142410 | Msa1391480 | 0.999414 | 8.653052e-310 | -8.615850e-47 |
| Msa0144420 | Msa1391480 | 0.801618 | 8.269999e-49 | -8.615850e-47 |
| Msa0144430 | Msa1391480 | 0.815676 | 8.182876e-52 | -8.615850e-47 |
| Msa0146080 | Msa1391480 | 0.812382 | 4.359585e-51 | -8.615850e-47 |
| Msa0147980 | Msa1391480 | 0.827046 | 1.941655e-54 | -8.615850e-47 |
| Msa0149440 | Msa1391480 | 0.804634 | 1.965834e-49 | -8.615850e-47 |
| Msa0152870 | Msa1391480 | 0.801332 | 9.465488e-49 | -8.615850e-47 |
| Msa0166750 | Msa1391480 | 0.804457 | 2.140846e-49 | -8.615850e-47 |
| Msa0168090 | Msa1391480 | 0.859121 | 5.148955e-63 | -8.615850e-47 |
| Msa0169610 | Msa1391480 | 0.822141 | 2.776644e-53 | -8.615850e-47 |
| Msa0174000 | Msa1391480 | 0.843980 | 1.003598e-58 | -8.615850e-47 |
| Msa0178120 | Msa1391480 | 0.822566 | 2.211447e-53 | -8.615850e-47 |
| Msa0179030 | Msa1391480 | 0.825538 | 4.439264e-54 | -8.615850e-47 |
| Msa0199420 | Msa1391480 | 0.830511 | 2.818189e-55 | -8.615850e-47 |
| Msa0209140 | Msa1391480 | 0.820965 | 5.188891e-53 | -8.615850e-47 |
| Msa0223170 | Msa1391480 | 0.831206 | 1.903295e-55 | -8.615850e-47 |
| Msa0230520 | Msa1391480 | 0.811085 | 8.351643e-51 | -8.615850e-47 |
| Msa0231100 | Msa1391480 | 0.812166 | 4.861047e-51 | -8.615850e-47 |
| Msa0236620 | Msa1391480 | 0.826903 | 2.101004e-54 | -8.615850e-47 |
| Msa1226610 | Msa1391480 | 0.815939 | 7.147313e-52 | -8.615850e-47 |
| Msa1255410 | Msa1391480 | 0.812547 | 4.012752e-51 | -8.615850e-47 |
| Msa1262890 | Msa1391480 | 0.813079 | 3.069041e-51 | -8.615850e-47 |
| Msa1264210 | Msa1391480 | 0.803432 | 3.496782e-49 | -8.615850e-47 |
| Msa1270620 | Msa1391480 | 0.801562 | 8.490251e-49 | -8.615850e-47 |
| Msa1276970 | Msa1391480 | 0.828374 | 9.316553e-55 | -8.615850e-47 |
| Msa1292020 | Msa1391480 | 0.808870 | 2.504339e-50 | -8.615850e-47 |
| Msa1298100 | Msa1391480 | 0.839385 | 1.635327e-57 | -8.615850e-47 |
| Msa1331250 | Msa1391480 | 0.829203 | 5.869232e-55 | -8.615850e-47 |
| Msa1344310 | Msa1391480 | 0.829305 | 5.546413e-55 | -8.615850e-47 |
| Msa0376280 | Msa1391480 | 0.808592 | 2.871989e-50 | -8.615850e-47 |
| Msa0382370 | Msa1391480 | 0.801998 | 6.909813e-49 | -8.615850e-47 |
| Msa0384670 | Msa1391480 | 0.840845 | 6.803081e-58 | -8.615850e-47 |
| Msa0419720 | Msa1391480 | 0.807005 | 6.242394e-50 | -8.615850e-47 |
| Msa0434570 | Msa1391480 | 0.841307 | 5.143883e-58 | -8.615850e-47 |
| Msa0434770 | Msa1391480 | 0.843899 | 1.054776e-58 | -8.615850e-47 |
| Msa0436200 | Msa1391480 | 0.805288 | 1.435110e-49 | -8.615850e-47 |
| Msa0437020 | Msa1391480 | 0.804959 | 1.681418e-49 | -8.615850e-47 |
| Msa0443390 | Msa1391480 | 0.816255 | 6.075692e-52 | -8.615850e-47 |
| Msa0451150 | Msa1391480 | 0.804801 | 1.814627e-49 | -8.615850e-47 |
| Msa0478580 | Msa1391480 | 0.835513 | 1.606618e-56 | -8.615850e-47 |
| Msa0992550 | Msa1391480 | 0.809080 | 2.257744e-50 | -8.615850e-47 |
| Msa0997430 | Msa1391480 | 0.800317 | 1.525427e-48 | -8.615850e-47 |
| Msa1027250 | Msa1391480 | 0.817550 | 3.111406e-52 | -8.615850e-47 |
| Msa1027300 | Msa1391480 | 0.815063 | 1.120238e-51 | -8.615850e-47 |
| Msa1027360 | Msa1391480 | 0.807221 | 5.618741e-50 | -8.615850e-47 |
| Msa1030080 | Msa1391480 | 0.817996 | 2.467703e-52 | -8.615850e-47 |
| Msa1031390 | Msa1391480 | 0.801026 | 1.093333e-48 | -8.615850e-47 |
| Msa1042480 | Msa1391480 | 0.823355 | 1.448474e-53 | -8.615850e-47 |
| Msa1056900 | Msa1391480 | 0.816895 | 4.367775e-52 | -8.615850e-47 |
| Msa1070390 | Msa1391480 | 0.807045 | 6.123119e-50 | -8.615850e-47 |
| Msa1072600 | Msa1391480 | 0.812191 | 4.799928e-51 | -8.615850e-47 |
| Msa1072710 | Msa1391480 | 0.806113 | 9.630977e-50 | -8.615850e-47 |
| Msa1089270 | Msa1391480 | 0.818673 | 1.733366e-52 | -8.615850e-47 |
| Msa0241830 | Msa1391480 | 0.868714 | 5.316646e-66 | -8.615850e-47 |
| Msa0244970 | Msa1391480 | 0.842631 | 2.298400e-58 | -8.615850e-47 |
| Msa0244980 | Msa1391480 | 0.858613 | 7.303274e-63 | -8.615850e-47 |
| Msa0245430 | Msa1391480 | 0.817880 | 2.621283e-52 | -8.615850e-47 |
| Msa0245580 | Msa1391480 | 0.852961 | 3.273552e-61 | -8.615850e-47 |
| Msa0249580 | Msa1391480 | 0.819884 | 9.186157e-53 | -8.615850e-47 |
| Msa0261170 | Msa1391480 | 0.828621 | 8.121718e-55 | -8.615850e-47 |
| Msa0262480 | Msa1391480 | 0.840155 | 1.031051e-57 | -8.615850e-47 |
| Msa0270210 | Msa1391480 | 0.839817 | 1.262635e-57 | -8.615850e-47 |
| Msa0275360 | Msa1391480 | 0.813957 | 1.967519e-51 | -8.615850e-47 |
| Msa0279850 | Msa1391480 | 0.840946 | 6.401361e-58 | -8.615850e-47 |
| Msa0283420 | Msa1391480 | 0.835875 | 1.300573e-56 | -8.615850e-47 |
| Msa0295250 | Msa1391480 | 0.814264 | 1.683177e-51 | -8.615850e-47 |
| Msa0296250 | Msa1391480 | 0.859263 | 4.667116e-63 | -8.615850e-47 |
| Msa0296790 | Msa1391480 | 0.809129 | 2.203704e-50 | -8.615850e-47 |
| Msa0300280 | Msa1391480 | 0.826707 | 2.340634e-54 | -8.615850e-47 |
| Msa0300350 | Msa1391480 | 0.824792 | 6.661930e-54 | -8.615850e-47 |
| Msa0301520 | Msa1391480 | 0.822515 | 2.273425e-53 | -8.615850e-47 |
| Msa0305310 | Msa1391480 | 0.801861 | 7.373080e-49 | -8.615850e-47 |
| Msa0307850 | Msa1391480 | 0.803201 | 3.903012e-49 | -8.615850e-47 |
| Msa0320590 | Msa1391480 | 0.815993 | 6.952212e-52 | -8.615850e-47 |
| Msa0321690 | Msa1391480 | 0.829617 | 4.657121e-55 | -8.615850e-47 |
| Msa0322900 | Msa1391480 | 0.863450 | 2.468720e-64 | -8.615850e-47 |
| Msa0332640 | Msa1391480 | 0.819185 | 1.326375e-52 | -8.615850e-47 |
| Msa0341690 | Msa1391480 | 0.806486 | 8.037476e-50 | -8.615850e-47 |
| Msa0363060 | Msa1391480 | 0.846675 | 1.871375e-59 | -8.615850e-47 |
| Msa0363640 | Msa1391480 | 0.807813 | 4.207478e-50 | -8.615850e-47 |
| Msa1123350 | Msa1391480 | 0.877557 | 5.712469e-69 | -8.615850e-47 |
| Msa1126830 | Msa1391480 | 0.828870 | 7.068634e-55 | -8.615850e-47 |
| Msa1127540 | Msa1391480 | 0.857299 | 1.794599e-62 | -8.615850e-47 |
| Msa1127590 | Msa1391480 | 0.834515 | 2.866831e-56 | -8.615850e-47 |
| Msa1131560 | Msa1391480 | 0.815554 | 8.711950e-52 | -8.615850e-47 |
| Msa1145240 | Msa1391480 | 0.806279 | 8.885096e-50 | -8.615850e-47 |
| Msa1158230 | Msa1391480 | 0.802750 | 4.837189e-49 | -8.615850e-47 |
| Msa1165780 | Msa1391480 | 0.853888 | 1.774083e-61 | -8.615850e-47 |
| Msa1166870 | Msa1391480 | 0.800722 | 1.261217e-48 | -8.615850e-47 |
| Msa1173900 | Msa1391480 | 0.803578 | 3.261099e-49 | -8.615850e-47 |
| Msa1201810 | Msa1391480 | 0.807603 | 4.662533e-50 | -8.615850e-47 |
| Msa1201830 | Msa1391480 | 0.816100 | 6.582668e-52 | -8.615850e-47 |
| Msa1202580 | Msa1391480 | 0.830834 | 2.348436e-55 | -8.615850e-47 |
| Msa1205480 | Msa1391480 | 0.807216 | 5.632565e-50 | -8.615850e-47 |
| Msa1206650 | Msa1391480 | 0.847180 | 1.361195e-59 | -8.615850e-47 |
| Msa1208020 | Msa1391480 | 0.813596 | 2.363259e-51 | -8.615850e-47 |
| Msa1211830 | Msa1391480 | 0.812772 | 3.583797e-51 | -8.615850e-47 |
| Msa1214320 | Msa1391480 | 0.807547 | 4.791482e-50 | -8.615850e-47 |
| Msa0485240 | Msa1391480 | 0.823160 | 1.608781e-53 | -8.615850e-47 |
| Msa0491000 | Msa1391480 | 0.818498 | 1.899315e-52 | -8.615850e-47 |
| Msa0509120 | Msa1391480 | 0.805676 | 1.189976e-49 | -8.615850e-47 |
| Msa0511770 | Msa1391480 | 0.835131 | 2.006403e-56 | -8.615850e-47 |
| Msa0518030 | Msa1391480 | 0.830730 | 2.490743e-55 | -8.615850e-47 |
| Msa0519150 | Msa1391480 | 0.808071 | 3.707615e-50 | -8.615850e-47 |
| Msa0531250 | Msa1391480 | 0.822942 | 1.808468e-53 | -8.615850e-47 |
| Msa0534750 | Msa1391480 | 0.820413 | 6.951038e-53 | -8.615850e-47 |
| Msa0540550 | Msa1391480 | 0.801332 | 9.467411e-49 | -8.615850e-47 |
| Msa0547990 | Msa1391480 | 0.864777 | 9.523796e-65 | -8.615850e-47 |
| Msa0550540 | Msa1391480 | 0.807911 | 4.009891e-50 | -8.615850e-47 |
| Msa0550570 | Msa1391480 | 0.810805 | 9.601072e-51 | -8.615850e-47 |
| Msa0560500 | Msa1391480 | 0.807822 | 4.189360e-50 | -8.615850e-47 |
| Msa0581110 | Msa1391480 | 0.827870 | 1.231992e-54 | -8.615850e-47 |
| Msa0583500 | Msa1391480 | 0.806259 | 8.972374e-50 | -8.615850e-47 |
| Msa0593700 | Msa1391480 | 0.850107 | 2.102667e-60 | -8.615850e-47 |
| Msa0597770 | Msa1391480 | 0.818242 | 2.171457e-52 | -8.615850e-47 |
| Msa0864420 | Msa1391480 | 0.811447 | 6.970521e-51 | -8.615850e-47 |
| Msa0865620 | Msa1391480 | 0.822299 | 2.550962e-53 | -8.615850e-47 |
| Msa0870650 | Msa1391480 | 0.824634 | 7.257561e-54 | -8.615850e-47 |
| Msa0879850 | Msa1391480 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa0892640 | Msa1391480 | 0.816280 | 5.997403e-52 | -8.615850e-47 |
| Msa0903780 | Msa1391480 | 0.820565 | 6.414461e-53 | -8.615850e-47 |
| Msa0913240 | Msa1391480 | 0.827315 | 1.674723e-54 | -8.615850e-47 |
| Msa0928120 | Msa1391480 | 0.805428 | 1.341497e-49 | -8.615850e-47 |
| Msa0943170 | Msa1391480 | 0.829322 | 5.492018e-55 | -8.615850e-47 |
| Msa0944200 | Msa1391480 | 0.801332 | 9.465488e-49 | -8.615850e-47 |
| Msa0963020 | Msa1391480 | 0.815412 | 9.366779e-52 | -8.615850e-47 |
| Msa0973320 | Msa1391480 | 0.817472 | 3.240044e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391480 | MtrunA17_Chr8g0383991 | 95.738 | 305 | 11 | 1 | 1 | 305 | 1 | 303 | 0.0 | 587 |
| Msa1391480 | MtrunA17_Chr3g0142891 | 30.660 | 212 | 93 | 3 | 139 | 302 | 52 | 257 | 6.82e-23 | 95.1 |
| Msa1391480 | MtrunA17_Chr3g0142871 | 30.702 | 228 | 98 | 4 | 132 | 302 | 428 | 652 | 1.07e-22 | 98.2 |
| Msa1391480 | MtrunA17_Chr7g0269901 | 31.140 | 228 | 97 | 4 | 132 | 302 | 428 | 652 | 1.47e-22 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391480 | AT5G45420.2 | 51.553 | 322 | 119 | 10 | 1 | 301 | 1 | 306 | 1.59e-82 | 251 |
| Msa1391480 | AT5G45420.1 | 51.553 | 322 | 119 | 10 | 1 | 301 | 1 | 306 | 1.59e-82 | 251 |
| Msa1391480 | AT5G45420.3 | 51.553 | 322 | 119 | 10 | 1 | 301 | 1 | 306 | 1.59e-82 | 251 |
| Msa1391480 | AT3G11450.1 | 34.615 | 182 | 80 | 3 | 159 | 302 | 466 | 646 | 6.90e-22 | 96.3 |
| Msa1391480 | AT5G06110.1 | 30.732 | 205 | 97 | 4 | 140 | 300 | 457 | 660 | 7.68e-19 | 87.4 |
| Msa1391480 | AT5G06110.2 | 30.732 | 205 | 97 | 4 | 140 | 300 | 457 | 660 | 7.68e-19 | 87.4 |
Find 96 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACGATTTCGTTGGTTTC+TGG | 0.174909 | tig0021435:+49492 | None:intergenic |
| AAAGTTGCTGCTGCTGTTCC+TGG | 0.293700 | tig0021435:-48759 | Msa1391480:CDS |
| TCGGTTGAGGTTTCCTGATC+GGG | 0.354119 | tig0021435:+49290 | None:intergenic |
| GTGAGAAAGTTGAAAGTGTT+TGG | 0.354834 | tig0021435:-48854 | Msa1391480:CDS |
| CAGAATTGAAGAAAGGGTTT+CGG | 0.376978 | tig0021435:-48704 | Msa1391480:CDS |
| TGCATTGTCGGCGGCGGTGG+TGG | 0.384974 | tig0021435:-49138 | Msa1391480:CDS |
| GGGTTTCGGACTGCAAAATC+TGG | 0.390024 | tig0021435:-48690 | Msa1391480:CDS |
| TTTGCATTCTCTCTCCTCCT+TGG | 0.398248 | tig0021435:-49380 | Msa1391480:CDS |
| TTCGCTCCAATCTCCATTAC+CGG | 0.403852 | tig0021435:-49353 | Msa1391480:CDS |
| TTGAAGAATCGAAATGGAAA+TGG | 0.409406 | tig0021435:-49170 | Msa1391480:CDS |
| ATCGTCCGATCTGCGTTGCT+TGG | 0.410728 | tig0021435:+49229 | None:intergenic |
| CATCTCATAGCAACATCTTT+CGG | 0.412166 | tig0021435:+48786 | None:intergenic |
| AAAGGAGTTGGGAGAGAAGA+AGG | 0.421544 | tig0021435:-48967 | Msa1391480:CDS |
| AGAGAAGAAGGTTGATGATT+CGG | 0.423910 | tig0021435:-48955 | Msa1391480:CDS |
| GATAAGAGACTTGTTGAAGA+AGG | 0.424391 | tig0021435:-48894 | Msa1391480:CDS |
| GTCGGCGGCGGTGGTGGAGG+AGG | 0.424999 | tig0021435:-49132 | Msa1391480:CDS |
| TGTTGCATTGTCGGCGGCGG+TGG | 0.428265 | tig0021435:-49141 | Msa1391480:CDS |
| CGGGTGCACCGGACTGATAC+AGG | 0.433545 | tig0021435:+49537 | None:intergenic |
| ATTGTCGGCGGCGGTGGTGG+AGG | 0.433697 | tig0021435:-49135 | Msa1391480:CDS |
| TGGAAACGGTGTTGCATTGT+CGG | 0.435353 | tig0021435:-49150 | Msa1391480:CDS |
| ACGGGAATCGCCGCCGGTAA+TGG | 0.437783 | tig0021435:+49340 | None:intergenic |
| TGCCGTCAATTTCCCCGATC+AGG | 0.438106 | tig0021435:-49303 | Msa1391480:CDS |
| GGCGGCGGTGGTGGAGGAGG+AGG | 0.446195 | tig0021435:-49129 | Msa1391480:CDS |
| TCGCCGCCGGTAATGGAGAT+TGG | 0.447359 | tig0021435:+49347 | None:intergenic |
| AGAATTGCAGAATTGAAGAA+AGG | 0.450045 | tig0021435:-48711 | Msa1391480:CDS |
| ATCGGTTGAGGTTTCCTGAT+CGG | 0.454293 | tig0021435:+49289 | None:intergenic |
| GAGGCGATAGCGGAGGCATT+CGG | 0.458797 | tig0021435:-49026 | Msa1391480:CDS |
| GATTTCGTTGGTTTCTGGTA+AGG | 0.461575 | tig0021435:+49497 | None:intergenic |
| TTCAGTGGCCGCGGGTGCAC+CGG | 0.461986 | tig0021435:+49526 | None:intergenic |
| CGAAAGATGTTGCTATGAGA+TGG | 0.463082 | tig0021435:-48785 | Msa1391480:CDS |
| TGGAGGAGGAGGAGAAGGAA+TGG | 0.463216 | tig0021435:-49118 | Msa1391480:CDS |
| GTTTCGTTGAAGAATCGAAA+TGG | 0.464225 | tig0021435:-49176 | Msa1391480:CDS |
| CAACCGATGAGGATGATTCC+AGG | 0.465520 | tig0021435:-49274 | Msa1391480:CDS |
| GGCGATTCCCGTGTCGGCCG+TGG | 0.468929 | tig0021435:-49329 | Msa1391480:CDS |
| GGAATCATCCTCATCGGTTG+AGG | 0.470477 | tig0021435:+49277 | None:intergenic |
| TCGATTTGAGCGGTTCAGAT+TGG | 0.470526 | tig0021435:+49414 | None:intergenic |
| AGGCTGTGATTCAGTGGCCG+CGG | 0.476901 | tig0021435:+49517 | None:intergenic |
| CGGCATGACCACGGCCGACA+CGG | 0.478990 | tig0021435:+49321 | None:intergenic |
| TTCAACGAAACCACCGGCGC+TGG | 0.480043 | tig0021435:+49188 | None:intergenic |
| GGCATGACCACGGCCGACAC+GGG | 0.485981 | tig0021435:+49322 | None:intergenic |
| GGTGGTGGAGGAGGAGGAGA+AGG | 0.492408 | tig0021435:-49123 | Msa1391480:CDS |
| AAGAGACTTGTTGAAGAAGG+AGG | 0.496476 | tig0021435:-48891 | Msa1391480:CDS |
| TCCCACCGTCCTGGTTTCCC+CGG | 0.499822 | tig0021435:+49047 | None:intergenic |
| GAAGATTGAAGAGATTGAAA+CGG | 0.500067 | tig0021435:+49460 | None:intergenic |
| GGCTGTGATTCAGTGGCCGC+GGG | 0.502205 | tig0021435:+49518 | None:intergenic |
| GAATTGCAGAATTGAAGAAA+GGG | 0.503367 | tig0021435:-48710 | Msa1391480:CDS |
| CAAGCTGCTTTCGATTTCCC+AGG | 0.506123 | tig0021435:+48741 | None:intergenic |
| CACCGTCCTGGTTTCCCCGG+TGG | 0.513685 | tig0021435:+49050 | None:intergenic |
| GCCGACACGGGAATCGCCGC+CGG | 0.516860 | tig0021435:+49334 | None:intergenic |
| GGTGAAGAAATCAAAGGAGT+TGG | 0.518193 | tig0021435:-48979 | Msa1391480:CDS |
| CGGTGTTGCATTGTCGGCGG+CGG | 0.518420 | tig0021435:-49144 | Msa1391480:CDS |
| GTGAAGAAATCAAAGGAGTT+GGG | 0.518866 | tig0021435:-48978 | Msa1391480:CDS |
| CGATTCTTCAACGAAACCAC+CGG | 0.522401 | tig0021435:+49182 | None:intergenic |
| GAAGGAGGAGATTTAGCGAC+GGG | 0.533839 | tig0021435:-48876 | Msa1391480:CDS |
| TCTGAAGAAGAGAAAAGCGT+TGG | 0.535242 | tig0021435:-48916 | Msa1391480:CDS |
| GCTATCGCCTCCCACCGTCC+TGG | 0.536007 | tig0021435:+49038 | None:intergenic |
| CTCTGTAGTAGCTCCAGCGC+CGG | 0.539400 | tig0021435:-49201 | Msa1391480:CDS |
| AATCGAAATGGAAATGGAAA+CGG | 0.539438 | tig0021435:-49164 | Msa1391480:CDS |
| ACCGGCGGCGATTCCCGTGT+CGG | 0.539977 | tig0021435:-49335 | Msa1391480:CDS |
| TTTCCTGGAATCATCCTCAT+CGG | 0.539989 | tig0021435:+49271 | None:intergenic |
| AGGACGGTGGGAGGCGATAG+CGG | 0.545275 | tig0021435:-49036 | Msa1391480:CDS |
| GGGGAAACCAGGACGGTGGG+AGG | 0.546154 | tig0021435:-49045 | Msa1391480:CDS |
| CAGATCCAAGCAACGCAGAT+CGG | 0.552256 | tig0021435:-49234 | Msa1391480:CDS |
| AAGTTGCTGCTGCTGTTCCT+GGG | 0.554829 | tig0021435:-48758 | Msa1391480:CDS |
| ACCGGGGAAACCAGGACGGT+GGG | 0.559178 | tig0021435:-49048 | Msa1391480:CDS |
| CCGAAGTTCCTGTATCAGTC+CGG | 0.563162 | tig0021435:-49545 | Msa1391480:CDS |
| GGCATTCGGAGGGCGTCACA+AGG | 0.566101 | tig0021435:-49012 | Msa1391480:CDS |
| GAAAGATGTTGCTATGAGAT+GGG | 0.567305 | tig0021435:-48784 | Msa1391480:CDS |
| CTGGTAAGGCTGTGATTCAG+TGG | 0.573589 | tig0021435:+49511 | None:intergenic |
| CCGGACTGATACAGGAACTT+CGG | 0.574834 | tig0021435:+49545 | None:intergenic |
| TGTAGTAGCTCCAGCGCCGG+TGG | 0.575392 | tig0021435:-49198 | Msa1391480:CDS |
| CACCGGGGAAACCAGGACGG+TGG | 0.578167 | tig0021435:-49049 | Msa1391480:CDS |
| TTCCTGATCGGGGAAATTGA+CGG | 0.583685 | tig0021435:+49301 | None:intergenic |
| GCGATAGCGGAGGCATTCGG+AGG | 0.585439 | tig0021435:-49023 | Msa1391480:CDS |
| GGAAATTGACGGCATGACCA+CGG | 0.588936 | tig0021435:+49312 | None:intergenic |
| GTATCAGTCCGGTGCACCCG+CGG | 0.599158 | tig0021435:-49534 | Msa1391480:CDS |
| GCGTCACAAGGTGGAAAGCG+TGG | 0.605173 | tig0021435:-49000 | Msa1391480:CDS |
| GTAATGGAGATTGGAGCGAA+AGG | 0.608208 | tig0021435:+49356 | None:intergenic |
| ACAGCGATGAACGATTTCGT+TGG | 0.617295 | tig0021435:+49485 | None:intergenic |
| TGAGATTCTGAAGAAACAGA+TGG | 0.629866 | tig0021435:-49081 | Msa1391480:CDS |
| CGGTTGAGGTTTCCTGATCG+GGG | 0.631525 | tig0021435:+49291 | None:intergenic |
| ATCCACCGGGGAAACCAGGA+CGG | 0.634948 | tig0021435:-49052 | Msa1391480:CDS |
| AAGTGTTTGGAGTTCAAACG+AGG | 0.645478 | tig0021435:-48841 | Msa1391480:CDS |
| AGAAGGAGGAGATTTAGCGA+CGG | 0.648578 | tig0021435:-48877 | Msa1391480:CDS |
| CGGCGCTGGAGCTACTACAG+AGG | 0.650195 | tig0021435:+49202 | None:intergenic |
| CGATAGCGGAGGCATTCGGA+GGG | 0.653736 | tig0021435:-49022 | Msa1391480:CDS |
| GCTCCAATCTCCATTACCGG+CGG | 0.663325 | tig0021435:-49350 | Msa1391480:CDS |
| ACGGTGGGAGGCGATAGCGG+AGG | 0.665574 | tig0021435:-49033 | Msa1391480:CDS |
| AAGCGTGGTGAAGAAATCAA+AGG | 0.666488 | tig0021435:-48985 | Msa1391480:CDS |
| AAACGGTGTTGCATTGTCGG+CGG | 0.669146 | tig0021435:-49147 | Msa1391480:CDS |
| TCAGGAAACCTCAACCGATG+AGG | 0.671357 | tig0021435:-49285 | Msa1391480:CDS |
| AGATTGGAGCGAAAGGACCA+AGG | 0.675323 | tig0021435:+49363 | None:intergenic |
| ATTCGGAGGGCGTCACAAGG+TGG | 0.679939 | tig0021435:-49009 | Msa1391480:CDS |
| CAGATGAAAATCGATTTGAG+CGG | 0.706129 | tig0021435:+49404 | None:intergenic |
| TTGGAGCGAAAGGACCAAGG+AGG | 0.738797 | tig0021435:+49366 | None:intergenic |
| GGAGAAGGAATGGAACGACG+AGG | 0.745135 | tig0021435:-49108 | Msa1391480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GAAGATTGAAGAGATTGAAA+CGG | + | tig0021435:48792-48811 | None:intergenic | 30.0% | |
| TTGAAGAATCGAAATGGAAA+TGG | - | tig0021435:49079-49098 | Msa1391480:CDS | 30.0% | |
| AATCGAAATGGAAATGGAAA+CGG | - | tig0021435:49085-49104 | Msa1391480:CDS | 30.0% | |
| AGAATTGCAGAATTGAAGAA+AGG | - | tig0021435:49538-49557 | Msa1391480:CDS | 30.0% | |
| GAATTGCAGAATTGAAGAAA+GGG | - | tig0021435:49539-49558 | Msa1391480:CDS | 30.0% | |
| GAAGATTGAAGAGATTGAAA+CGG | + | tig0021435:48792-48811 | None:intergenic | 30.0% | |
| TTGAAGAATCGAAATGGAAA+TGG | - | tig0021435:49079-49098 | Msa1391480:CDS | 30.0% | |
| AATCGAAATGGAAATGGAAA+CGG | - | tig0021435:49085-49104 | Msa1391480:CDS | 30.0% | |
| AGAATTGCAGAATTGAAGAA+AGG | - | tig0021435:49538-49557 | Msa1391480:CDS | 30.0% | |
| GAATTGCAGAATTGAAGAAA+GGG | - | tig0021435:49539-49558 | Msa1391480:CDS | 30.0% | |
| !! | CAGATGAAAATCGATTTGAG+CGG | + | tig0021435:48848-48867 | None:intergenic | 35.0% |
| GTTTCGTTGAAGAATCGAAA+TGG | - | tig0021435:49073-49092 | Msa1391480:CDS | 35.0% | |
| ! | TGAGATTCTGAAGAAACAGA+TGG | - | tig0021435:49168-49187 | Msa1391480:CDS | 35.0% |
| GTGAAGAAATCAAAGGAGTT+GGG | - | tig0021435:49271-49290 | Msa1391480:CDS | 35.0% | |
| !! | AGAGAAGAAGGTTGATGATT+CGG | - | tig0021435:49294-49313 | Msa1391480:CDS | 35.0% |
| !! | GATAAGAGACTTGTTGAAGA+AGG | - | tig0021435:49355-49374 | Msa1391480:CDS | 35.0% |
| !! | GTGAGAAAGTTGAAAGTGTT+TGG | - | tig0021435:49395-49414 | Msa1391480:CDS | 35.0% |
| CATCTCATAGCAACATCTTT+CGG | + | tig0021435:49466-49485 | None:intergenic | 35.0% | |
| GAAAGATGTTGCTATGAGAT+GGG | - | tig0021435:49465-49484 | Msa1391480:CDS | 35.0% | |
| CAGAATTGAAGAAAGGGTTT+CGG | - | tig0021435:49545-49564 | Msa1391480:CDS | 35.0% | |
| !! | CAGATGAAAATCGATTTGAG+CGG | + | tig0021435:48848-48867 | None:intergenic | 35.0% |
| GTTTCGTTGAAGAATCGAAA+TGG | - | tig0021435:49073-49092 | Msa1391480:CDS | 35.0% | |
| ! | TGAGATTCTGAAGAAACAGA+TGG | - | tig0021435:49168-49187 | Msa1391480:CDS | 35.0% |
| GTGAAGAAATCAAAGGAGTT+GGG | - | tig0021435:49271-49290 | Msa1391480:CDS | 35.0% | |
| !! | AGAGAAGAAGGTTGATGATT+CGG | - | tig0021435:49294-49313 | Msa1391480:CDS | 35.0% |
| !! | GATAAGAGACTTGTTGAAGA+AGG | - | tig0021435:49355-49374 | Msa1391480:CDS | 35.0% |
| !! | GTGAGAAAGTTGAAAGTGTT+TGG | - | tig0021435:49395-49414 | Msa1391480:CDS | 35.0% |
| CATCTCATAGCAACATCTTT+CGG | + | tig0021435:49466-49485 | None:intergenic | 35.0% | |
| GAAAGATGTTGCTATGAGAT+GGG | - | tig0021435:49465-49484 | Msa1391480:CDS | 35.0% | |
| CAGAATTGAAGAAAGGGTTT+CGG | - | tig0021435:49545-49564 | Msa1391480:CDS | 35.0% | |
| !! | GATTTCGTTGGTTTCTGGTA+AGG | + | tig0021435:48755-48774 | None:intergenic | 40.0% |
| !! | TGAACGATTTCGTTGGTTTC+TGG | + | tig0021435:48760-48779 | None:intergenic | 40.0% |
| !! | CGCTCAAATCGATTTTCATC+TGG | - | tig0021435:48846-48865 | Msa1391480:CDS | 40.0% |
| TTTCCTGGAATCATCCTCAT+CGG | + | tig0021435:48981-49000 | None:intergenic | 40.0% | |
| ACAGATGGTGAAAAATCCAC+CGG | - | tig0021435:49183-49202 | Msa1391480:CDS | 40.0% | |
| AAGCGTGGTGAAGAAATCAA+AGG | - | tig0021435:49264-49283 | Msa1391480:CDS | 40.0% | |
| GGTGAAGAAATCAAAGGAGT+TGG | - | tig0021435:49270-49289 | Msa1391480:CDS | 40.0% | |
| ! | TCTGAAGAAGAGAAAAGCGT+TGG | - | tig0021435:49333-49352 | Msa1391480:CDS | 40.0% |
| !! | AAGAGACTTGTTGAAGAAGG+AGG | - | tig0021435:49358-49377 | Msa1391480:CDS | 40.0% |
| ! | AAGTGTTTGGAGTTCAAACG+AGG | - | tig0021435:49408-49427 | Msa1391480:CDS | 40.0% |
| CGAAAGATGTTGCTATGAGA+TGG | - | tig0021435:49464-49483 | Msa1391480:CDS | 40.0% | |
| !! | GATTTCGTTGGTTTCTGGTA+AGG | + | tig0021435:48755-48774 | None:intergenic | 40.0% |
| !! | TGAACGATTTCGTTGGTTTC+TGG | + | tig0021435:48760-48779 | None:intergenic | 40.0% |
| !! | CGCTCAAATCGATTTTCATC+TGG | - | tig0021435:48846-48865 | Msa1391480:CDS | 40.0% |
| TTTCCTGGAATCATCCTCAT+CGG | + | tig0021435:48981-49000 | None:intergenic | 40.0% | |
| ACAGATGGTGAAAAATCCAC+CGG | - | tig0021435:49183-49202 | Msa1391480:CDS | 40.0% | |
| AAGCGTGGTGAAGAAATCAA+AGG | - | tig0021435:49264-49283 | Msa1391480:CDS | 40.0% | |
| GGTGAAGAAATCAAAGGAGT+TGG | - | tig0021435:49270-49289 | Msa1391480:CDS | 40.0% | |
| ! | TCTGAAGAAGAGAAAAGCGT+TGG | - | tig0021435:49333-49352 | Msa1391480:CDS | 40.0% |
| !! | AAGAGACTTGTTGAAGAAGG+AGG | - | tig0021435:49358-49377 | Msa1391480:CDS | 40.0% |
| ! | AAGTGTTTGGAGTTCAAACG+AGG | - | tig0021435:49408-49427 | Msa1391480:CDS | 40.0% |
| CGAAAGATGTTGCTATGAGA+TGG | - | tig0021435:49464-49483 | Msa1391480:CDS | 40.0% | |
| ACAGCGATGAACGATTTCGT+TGG | + | tig0021435:48767-48786 | None:intergenic | 45.0% | |
| ! | TCGATTTGAGCGGTTCAGAT+TGG | + | tig0021435:48838-48857 | None:intergenic | 45.0% |
| TTTGCATTCTCTCTCCTCCT+TGG | - | tig0021435:48869-48888 | Msa1391480:CDS | 45.0% | |
| ! | GTAATGGAGATTGGAGCGAA+AGG | + | tig0021435:48896-48915 | None:intergenic | 45.0% |
| TTCGCTCCAATCTCCATTAC+CGG | - | tig0021435:48896-48915 | Msa1391480:CDS | 45.0% | |
| TTCCTGATCGGGGAAATTGA+CGG | + | tig0021435:48951-48970 | None:intergenic | 45.0% | |
| ATCGGTTGAGGTTTCCTGAT+CGG | + | tig0021435:48963-48982 | None:intergenic | 45.0% | |
| CGATTCTTCAACGAAACCAC+CGG | + | tig0021435:49070-49089 | None:intergenic | 45.0% | |
| !! | TGGAAACGGTGTTGCATTGT+CGG | - | tig0021435:49099-49118 | Msa1391480:CDS | 45.0% |
| CAGATGGTGAAAAATCCACC+GGG | - | tig0021435:49184-49203 | Msa1391480:CDS | 45.0% | |
| AGATGGTGAAAAATCCACCG+GGG | - | tig0021435:49185-49204 | Msa1391480:CDS | 45.0% | |
| AAAGGAGTTGGGAGAGAAGA+AGG | - | tig0021435:49282-49301 | Msa1391480:CDS | 45.0% | |
| AGAAGGAGGAGATTTAGCGA+CGG | - | tig0021435:49372-49391 | Msa1391480:CDS | 45.0% | |
| ACAGCGATGAACGATTTCGT+TGG | + | tig0021435:48767-48786 | None:intergenic | 45.0% | |
| ! | TCGATTTGAGCGGTTCAGAT+TGG | + | tig0021435:48838-48857 | None:intergenic | 45.0% |
| TTTGCATTCTCTCTCCTCCT+TGG | - | tig0021435:48869-48888 | Msa1391480:CDS | 45.0% | |
| ! | GTAATGGAGATTGGAGCGAA+AGG | + | tig0021435:48896-48915 | None:intergenic | 45.0% |
| TTCGCTCCAATCTCCATTAC+CGG | - | tig0021435:48896-48915 | Msa1391480:CDS | 45.0% | |
| TTCCTGATCGGGGAAATTGA+CGG | + | tig0021435:48951-48970 | None:intergenic | 45.0% | |
| ATCGGTTGAGGTTTCCTGAT+CGG | + | tig0021435:48963-48982 | None:intergenic | 45.0% | |
| CGATTCTTCAACGAAACCAC+CGG | + | tig0021435:49070-49089 | None:intergenic | 45.0% | |
| !! | TGGAAACGGTGTTGCATTGT+CGG | - | tig0021435:49099-49118 | Msa1391480:CDS | 45.0% |
| CAGATGGTGAAAAATCCACC+GGG | - | tig0021435:49184-49203 | Msa1391480:CDS | 45.0% | |
| AGATGGTGAAAAATCCACCG+GGG | - | tig0021435:49185-49204 | Msa1391480:CDS | 45.0% | |
| AAAGGAGTTGGGAGAGAAGA+AGG | - | tig0021435:49282-49301 | Msa1391480:CDS | 45.0% | |
| AGAAGGAGGAGATTTAGCGA+CGG | - | tig0021435:49372-49391 | Msa1391480:CDS | 45.0% | |
| CCGGACTGATACAGGAACTT+CGG | + | tig0021435:48707-48726 | None:intergenic | 50.0% | |
| CCGAAGTTCCTGTATCAGTC+CGG | - | tig0021435:48704-48723 | Msa1391480:CDS | 50.0% | |
| CTGGTAAGGCTGTGATTCAG+TGG | + | tig0021435:48741-48760 | None:intergenic | 50.0% | |
| AGATTGGAGCGAAAGGACCA+AGG | + | tig0021435:48889-48908 | None:intergenic | 50.0% | |
| GGAAATTGACGGCATGACCA+CGG | + | tig0021435:48940-48959 | None:intergenic | 50.0% | |
| TCGGTTGAGGTTTCCTGATC+GGG | + | tig0021435:48962-48981 | None:intergenic | 50.0% | |
| TCAGGAAACCTCAACCGATG+AGG | - | tig0021435:48964-48983 | Msa1391480:CDS | 50.0% | |
| ! | GGAATCATCCTCATCGGTTG+AGG | + | tig0021435:48975-48994 | None:intergenic | 50.0% |
| CAACCGATGAGGATGATTCC+AGG | - | tig0021435:48975-48994 | Msa1391480:CDS | 50.0% | |
| !!! | GCGCTGCTGAGATTTTTTCC+TGG | + | tig0021435:48996-49015 | None:intergenic | 50.0% |
| CAGATCCAAGCAACGCAGAT+CGG | - | tig0021435:49015-49034 | Msa1391480:CDS | 50.0% | |
| !! | AAACGGTGTTGCATTGTCGG+CGG | - | tig0021435:49102-49121 | Msa1391480:CDS | 50.0% |
| AAAAATCCACCGGGGAAACC+AGG | - | tig0021435:49193-49212 | Msa1391480:CDS | 50.0% | |
| GAAGGAGGAGATTTAGCGAC+GGG | - | tig0021435:49373-49392 | Msa1391480:CDS | 50.0% | |
| AAAGTTGCTGCTGCTGTTCC+TGG | - | tig0021435:49490-49509 | Msa1391480:CDS | 50.0% | |
| AAGTTGCTGCTGCTGTTCCT+GGG | - | tig0021435:49491-49510 | Msa1391480:CDS | 50.0% | |
| ! | CAAGCTGCTTTCGATTTCCC+AGG | + | tig0021435:49511-49530 | None:intergenic | 50.0% |
| GGGTTTCGGACTGCAAAATC+TGG | - | tig0021435:49559-49578 | Msa1391480:CDS | 50.0% | |
| CCGGACTGATACAGGAACTT+CGG | + | tig0021435:48707-48726 | None:intergenic | 50.0% | |
| CCGAAGTTCCTGTATCAGTC+CGG | - | tig0021435:48704-48723 | Msa1391480:CDS | 50.0% | |
| CTGGTAAGGCTGTGATTCAG+TGG | + | tig0021435:48741-48760 | None:intergenic | 50.0% | |
| AGATTGGAGCGAAAGGACCA+AGG | + | tig0021435:48889-48908 | None:intergenic | 50.0% | |
| GGAAATTGACGGCATGACCA+CGG | + | tig0021435:48940-48959 | None:intergenic | 50.0% | |
| TCGGTTGAGGTTTCCTGATC+GGG | + | tig0021435:48962-48981 | None:intergenic | 50.0% | |
| TCAGGAAACCTCAACCGATG+AGG | - | tig0021435:48964-48983 | Msa1391480:CDS | 50.0% | |
| ! | GGAATCATCCTCATCGGTTG+AGG | + | tig0021435:48975-48994 | None:intergenic | 50.0% |
| CAACCGATGAGGATGATTCC+AGG | - | tig0021435:48975-48994 | Msa1391480:CDS | 50.0% | |
| !!! | GCGCTGCTGAGATTTTTTCC+TGG | + | tig0021435:48996-49015 | None:intergenic | 50.0% |
| CAGATCCAAGCAACGCAGAT+CGG | - | tig0021435:49015-49034 | Msa1391480:CDS | 50.0% | |
| !! | AAACGGTGTTGCATTGTCGG+CGG | - | tig0021435:49102-49121 | Msa1391480:CDS | 50.0% |
| AAAAATCCACCGGGGAAACC+AGG | - | tig0021435:49193-49212 | Msa1391480:CDS | 50.0% | |
| GAAGGAGGAGATTTAGCGAC+GGG | - | tig0021435:49373-49392 | Msa1391480:CDS | 50.0% | |
| AAAGTTGCTGCTGCTGTTCC+TGG | - | tig0021435:49490-49509 | Msa1391480:CDS | 50.0% | |
| AAGTTGCTGCTGCTGTTCCT+GGG | - | tig0021435:49491-49510 | Msa1391480:CDS | 50.0% | |
| ! | CAAGCTGCTTTCGATTTCCC+AGG | + | tig0021435:49511-49530 | None:intergenic | 50.0% |
| GGGTTTCGGACTGCAAAATC+TGG | - | tig0021435:49559-49578 | Msa1391480:CDS | 50.0% | |
| TTGGAGCGAAAGGACCAAGG+AGG | + | tig0021435:48886-48905 | None:intergenic | 55.0% | |
| GCTCCAATCTCCATTACCGG+CGG | - | tig0021435:48899-48918 | Msa1391480:CDS | 55.0% | |
| TGCCGTCAATTTCCCCGATC+AGG | - | tig0021435:48946-48965 | Msa1391480:CDS | 55.0% | |
| CGGTTGAGGTTTCCTGATCG+GGG | + | tig0021435:48961-48980 | None:intergenic | 55.0% | |
| ATCGTCCGATCTGCGTTGCT+TGG | + | tig0021435:49023-49042 | None:intergenic | 55.0% | |
| TGGAGGAGGAGGAGAAGGAA+TGG | - | tig0021435:49131-49150 | Msa1391480:CDS | 55.0% | |
| GGAGAAGGAATGGAACGACG+AGG | - | tig0021435:49141-49160 | Msa1391480:CDS | 55.0% | |
| TTGGAGCGAAAGGACCAAGG+AGG | + | tig0021435:48886-48905 | None:intergenic | 55.0% | |
| GCTCCAATCTCCATTACCGG+CGG | - | tig0021435:48899-48918 | Msa1391480:CDS | 55.0% | |
| TGCCGTCAATTTCCCCGATC+AGG | - | tig0021435:48946-48965 | Msa1391480:CDS | 55.0% | |
| CGGTTGAGGTTTCCTGATCG+GGG | + | tig0021435:48961-48980 | None:intergenic | 55.0% | |
| ATCGTCCGATCTGCGTTGCT+TGG | + | tig0021435:49023-49042 | None:intergenic | 55.0% | |
| TGGAGGAGGAGGAGAAGGAA+TGG | - | tig0021435:49131-49150 | Msa1391480:CDS | 55.0% | |
| GGAGAAGGAATGGAACGACG+AGG | - | tig0021435:49141-49160 | Msa1391480:CDS | 55.0% | |
| AGGCTGTGATTCAGTGGCCG+CGG | + | tig0021435:48735-48754 | None:intergenic | 60.0% | |
| !! | TCGCCGCCGGTAATGGAGAT+TGG | + | tig0021435:48905-48924 | None:intergenic | 60.0% |
| CTCTGTAGTAGCTCCAGCGC+CGG | - | tig0021435:49048-49067 | Msa1391480:CDS | 60.0% | |
| TTCAACGAAACCACCGGCGC+TGG | + | tig0021435:49064-49083 | None:intergenic | 60.0% | |
| ATCCACCGGGGAAACCAGGA+CGG | - | tig0021435:49197-49216 | Msa1391480:CDS | 60.0% | |
| !! | GAGGCGATAGCGGAGGCATT+CGG | - | tig0021435:49223-49242 | Msa1391480:CDS | 60.0% |
| !! | CGATAGCGGAGGCATTCGGA+GGG | - | tig0021435:49227-49246 | Msa1391480:CDS | 60.0% |
| !! | ATTCGGAGGGCGTCACAAGG+TGG | - | tig0021435:49240-49259 | Msa1391480:CDS | 60.0% |
| GCGTCACAAGGTGGAAAGCG+TGG | - | tig0021435:49249-49268 | Msa1391480:CDS | 60.0% | |
| AGGCTGTGATTCAGTGGCCG+CGG | + | tig0021435:48735-48754 | None:intergenic | 60.0% | |
| !! | TCGCCGCCGGTAATGGAGAT+TGG | + | tig0021435:48905-48924 | None:intergenic | 60.0% |
| CTCTGTAGTAGCTCCAGCGC+CGG | - | tig0021435:49048-49067 | Msa1391480:CDS | 60.0% | |
| TTCAACGAAACCACCGGCGC+TGG | + | tig0021435:49064-49083 | None:intergenic | 60.0% | |
| ATCCACCGGGGAAACCAGGA+CGG | - | tig0021435:49197-49216 | Msa1391480:CDS | 60.0% | |
| !! | GAGGCGATAGCGGAGGCATT+CGG | - | tig0021435:49223-49242 | Msa1391480:CDS | 60.0% |
| !! | CGATAGCGGAGGCATTCGGA+GGG | - | tig0021435:49227-49246 | Msa1391480:CDS | 60.0% |
| !! | ATTCGGAGGGCGTCACAAGG+TGG | - | tig0021435:49240-49259 | Msa1391480:CDS | 60.0% |
| GCGTCACAAGGTGGAAAGCG+TGG | - | tig0021435:49249-49268 | Msa1391480:CDS | 60.0% | |
| CGGGTGCACCGGACTGATAC+AGG | + | tig0021435:48715-48734 | None:intergenic | 65.0% | |
| GTATCAGTCCGGTGCACCCG+CGG | - | tig0021435:48715-48734 | Msa1391480:CDS | 65.0% | |
| GGCTGTGATTCAGTGGCCGC+GGG | + | tig0021435:48734-48753 | None:intergenic | 65.0% | |
| ACGGGAATCGCCGCCGGTAA+TGG | + | tig0021435:48912-48931 | None:intergenic | 65.0% | |
| ! | CGGCGCTGGAGCTACTACAG+AGG | + | tig0021435:49050-49069 | None:intergenic | 65.0% |
| ! | TGTAGTAGCTCCAGCGCCGG+TGG | - | tig0021435:49051-49070 | Msa1391480:CDS | 65.0% |
| !! | CGGTGTTGCATTGTCGGCGG+CGG | - | tig0021435:49105-49124 | Msa1391480:CDS | 65.0% |
| TGTTGCATTGTCGGCGGCGG+TGG | - | tig0021435:49108-49127 | Msa1391480:CDS | 65.0% | |
| !! | GGTGGTGGAGGAGGAGGAGA+AGG | - | tig0021435:49126-49145 | Msa1391480:CDS | 65.0% |
| ACCGGGGAAACCAGGACGGT+GGG | - | tig0021435:49201-49220 | Msa1391480:CDS | 65.0% | |
| TCCCACCGTCCTGGTTTCCC+CGG | + | tig0021435:49205-49224 | None:intergenic | 65.0% | |
| AGGACGGTGGGAGGCGATAG+CGG | - | tig0021435:49213-49232 | Msa1391480:CDS | 65.0% | |
| !! | GCGATAGCGGAGGCATTCGG+AGG | - | tig0021435:49226-49245 | Msa1391480:CDS | 65.0% |
| !! | GGCATTCGGAGGGCGTCACA+AGG | - | tig0021435:49237-49256 | Msa1391480:CDS | 65.0% |
| CGGGTGCACCGGACTGATAC+AGG | + | tig0021435:48715-48734 | None:intergenic | 65.0% | |
| GTATCAGTCCGGTGCACCCG+CGG | - | tig0021435:48715-48734 | Msa1391480:CDS | 65.0% | |
| GGCTGTGATTCAGTGGCCGC+GGG | + | tig0021435:48734-48753 | None:intergenic | 65.0% | |
| ACGGGAATCGCCGCCGGTAA+TGG | + | tig0021435:48912-48931 | None:intergenic | 65.0% | |
| ! | CGGCGCTGGAGCTACTACAG+AGG | + | tig0021435:49050-49069 | None:intergenic | 65.0% |
| ! | TGTAGTAGCTCCAGCGCCGG+TGG | - | tig0021435:49051-49070 | Msa1391480:CDS | 65.0% |
| !! | CGGTGTTGCATTGTCGGCGG+CGG | - | tig0021435:49105-49124 | Msa1391480:CDS | 65.0% |
| TGTTGCATTGTCGGCGGCGG+TGG | - | tig0021435:49108-49127 | Msa1391480:CDS | 65.0% | |
| !! | GGTGGTGGAGGAGGAGGAGA+AGG | - | tig0021435:49126-49145 | Msa1391480:CDS | 65.0% |
| ACCGGGGAAACCAGGACGGT+GGG | - | tig0021435:49201-49220 | Msa1391480:CDS | 65.0% | |
| TCCCACCGTCCTGGTTTCCC+CGG | + | tig0021435:49205-49224 | None:intergenic | 65.0% | |
| AGGACGGTGGGAGGCGATAG+CGG | - | tig0021435:49213-49232 | Msa1391480:CDS | 65.0% | |
| !! | GCGATAGCGGAGGCATTCGG+AGG | - | tig0021435:49226-49245 | Msa1391480:CDS | 65.0% |
| !! | GGCATTCGGAGGGCGTCACA+AGG | - | tig0021435:49237-49256 | Msa1391480:CDS | 65.0% |
| TTCAGTGGCCGCGGGTGCAC+CGG | + | tig0021435:48726-48745 | None:intergenic | 70.0% | |
| ACCGGCGGCGATTCCCGTGT+CGG | - | tig0021435:48914-48933 | Msa1391480:CDS | 70.0% | |
| GGCATGACCACGGCCGACAC+GGG | + | tig0021435:48930-48949 | None:intergenic | 70.0% | |
| CGGCATGACCACGGCCGACA+CGG | + | tig0021435:48931-48950 | None:intergenic | 70.0% | |
| TGCATTGTCGGCGGCGGTGG+TGG | - | tig0021435:49111-49130 | Msa1391480:CDS | 70.0% | |
| ! | ATTGTCGGCGGCGGTGGTGG+AGG | - | tig0021435:49114-49133 | Msa1391480:CDS | 70.0% |
| CACCGTCCTGGTTTCCCCGG+TGG | + | tig0021435:49202-49221 | None:intergenic | 70.0% | |
| CACCGGGGAAACCAGGACGG+TGG | - | tig0021435:49200-49219 | Msa1391480:CDS | 70.0% | |
| GGGGAAACCAGGACGGTGGG+AGG | - | tig0021435:49204-49223 | Msa1391480:CDS | 70.0% | |
| GCTATCGCCTCCCACCGTCC+TGG | + | tig0021435:49214-49233 | None:intergenic | 70.0% | |
| ! | ACGGTGGGAGGCGATAGCGG+AGG | - | tig0021435:49216-49235 | Msa1391480:CDS | 70.0% |
| TTCAGTGGCCGCGGGTGCAC+CGG | + | tig0021435:48726-48745 | None:intergenic | 70.0% | |
| ACCGGCGGCGATTCCCGTGT+CGG | - | tig0021435:48914-48933 | Msa1391480:CDS | 70.0% | |
| GGCATGACCACGGCCGACAC+GGG | + | tig0021435:48930-48949 | None:intergenic | 70.0% | |
| CGGCATGACCACGGCCGACA+CGG | + | tig0021435:48931-48950 | None:intergenic | 70.0% | |
| TGCATTGTCGGCGGCGGTGG+TGG | - | tig0021435:49111-49130 | Msa1391480:CDS | 70.0% | |
| ! | ATTGTCGGCGGCGGTGGTGG+AGG | - | tig0021435:49114-49133 | Msa1391480:CDS | 70.0% |
| CACCGTCCTGGTTTCCCCGG+TGG | + | tig0021435:49202-49221 | None:intergenic | 70.0% | |
| CACCGGGGAAACCAGGACGG+TGG | - | tig0021435:49200-49219 | Msa1391480:CDS | 70.0% | |
| GGGGAAACCAGGACGGTGGG+AGG | - | tig0021435:49204-49223 | Msa1391480:CDS | 70.0% | |
| GCTATCGCCTCCCACCGTCC+TGG | + | tig0021435:49214-49233 | None:intergenic | 70.0% | |
| ! | ACGGTGGGAGGCGATAGCGG+AGG | - | tig0021435:49216-49235 | Msa1391480:CDS | 70.0% |
| GCCGACACGGGAATCGCCGC+CGG | + | tig0021435:48918-48937 | None:intergenic | 75.0% | |
| ! | GGCGATTCCCGTGTCGGCCG+TGG | - | tig0021435:48920-48939 | Msa1391480:CDS | 75.0% |
| GCCGACACGGGAATCGCCGC+CGG | + | tig0021435:48918-48937 | None:intergenic | 75.0% | |
| ! | GGCGATTCCCGTGTCGGCCG+TGG | - | tig0021435:48920-48939 | Msa1391480:CDS | 75.0% |
| !!! | GTCGGCGGCGGTGGTGGAGG+AGG | - | tig0021435:49117-49136 | Msa1391480:CDS | 80.0% |
| !!! | GGCGGCGGTGGTGGAGGAGG+AGG | - | tig0021435:49120-49139 | Msa1391480:CDS | 80.0% |
| !!! | GTCGGCGGCGGTGGTGGAGG+AGG | - | tig0021435:49117-49136 | Msa1391480:CDS | 80.0% |
| !!! | GGCGGCGGTGGTGGAGGAGG+AGG | - | tig0021435:49120-49139 | Msa1391480:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021435 | gene | 48677 | 49594 | 48677 | ID=Msa1391480;Name=Msa1391480 |
| tig0021435 | mRNA | 48677 | 49594 | 48677 | ID=Msa1391480-mRNA-1;Parent=Msa1391480;Name=Msa1391480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|305 |
| tig0021435 | exon | 48677 | 49594 | 48677 | ID=Msa1391480-mRNA-1:exon:12725;Parent=Msa1391480-mRNA-1 |
| tig0021435 | CDS | 48677 | 49594 | 48677 | ID=Msa1391480-mRNA-1:cds;Parent=Msa1391480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
