Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030080 | GAU37781.1 | 87.793 | 213 | 10 | 3 | 1 | 198 | 1 | 212 | 2.23e-125 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030080 | A0A2Z6N234 | 87.793 | 213 | 10 | 3 | 1 | 198 | 1 | 212 | 1.07e-125 | 362 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa1030080 | 0.803979 | 2.691194e-49 | -8.615850e-47 |
| Msa0016540 | Msa1030080 | 0.818521 | 1.877388e-52 | -8.615850e-47 |
| Msa0093850 | Msa1030080 | 0.804483 | 2.113786e-49 | -8.615850e-47 |
| Msa0116380 | Msa1030080 | 0.819525 | 1.109486e-52 | -8.615850e-47 |
| Msa0615580 | Msa1030080 | 0.806060 | 9.880711e-50 | -8.615850e-47 |
| Msa0617170 | Msa1030080 | 0.800147 | 1.651788e-48 | -8.615850e-47 |
| Msa0644030 | Msa1030080 | 0.840733 | 7.277353e-58 | -8.615850e-47 |
| Msa0699780 | Msa1030080 | 0.804764 | 1.846951e-49 | -8.615850e-47 |
| Msa0702720 | Msa1030080 | 0.800727 | 1.258455e-48 | -8.615850e-47 |
| Msa0804250 | Msa1030080 | 0.804620 | 1.978915e-49 | -8.615850e-47 |
| Msa0142410 | Msa1030080 | 0.820224 | 7.679090e-53 | -8.615850e-47 |
| Msa0168090 | Msa1030080 | 0.803623 | 3.191291e-49 | -8.615850e-47 |
| Msa0174000 | Msa1030080 | 0.801109 | 1.051370e-48 | -8.615850e-47 |
| Msa0178120 | Msa1030080 | 0.808161 | 3.548399e-50 | -8.615850e-47 |
| Msa0179030 | Msa1030080 | 0.816007 | 6.902457e-52 | -8.615850e-47 |
| Msa0188350 | Msa1030080 | 0.822867 | 1.882776e-53 | -8.615850e-47 |
| Msa0202410 | Msa1030080 | 0.810917 | 9.080032e-51 | -8.615850e-47 |
| Msa0209140 | Msa1030080 | 0.826945 | 2.053347e-54 | -8.615850e-47 |
| Msa0223170 | Msa1030080 | 0.837514 | 4.969617e-57 | -8.615850e-47 |
| Msa0419720 | Msa1030080 | 0.801293 | 9.639756e-49 | -8.615850e-47 |
| Msa1030080 | Msa1079190 | 0.802727 | 4.890983e-49 | -8.615850e-47 |
| Msa1030080 | Msa1089450 | 0.806575 | 7.695511e-50 | -8.615850e-47 |
| Msa1030080 | Msa1115310 | 0.808716 | 2.701841e-50 | -8.615850e-47 |
| Msa1030080 | Msa1123350 | 0.839528 | 1.501491e-57 | -8.615850e-47 |
| Msa1030080 | Msa1127540 | 0.820972 | 5.169538e-53 | -8.615850e-47 |
| Msa1030080 | Msa1127590 | 0.831110 | 2.010243e-55 | -8.615850e-47 |
| Msa1030080 | Msa1131560 | 0.802779 | 4.772398e-49 | -8.615850e-47 |
| Msa1030080 | Msa1165780 | 0.822531 | 2.254050e-53 | -8.615850e-47 |
| Msa1030080 | Msa1169080 | 0.810298 | 1.235580e-50 | -8.615850e-47 |
| Msa1030080 | Msa1206650 | 0.800771 | 1.232655e-48 | -8.615850e-47 |
| Msa1030080 | Msa1262890 | 0.805390 | 1.366147e-49 | -8.615850e-47 |
| Msa1030080 | Msa1265590 | 0.805867 | 1.085035e-49 | -8.615850e-47 |
| Msa1030080 | Msa1351540 | 0.836807 | 7.538146e-57 | -8.615850e-47 |
| Msa1030080 | Msa1373170 | 0.846467 | 2.132701e-59 | -8.615850e-47 |
| Msa1030080 | Msa1373820 | 0.805478 | 1.309623e-49 | -8.615850e-47 |
| Msa1030080 | Msa1391480 | 0.817996 | 2.467703e-52 | -8.615850e-47 |
| Msa1030080 | Msa1395730 | 0.809469 | 1.862975e-50 | -8.615850e-47 |
| Msa1030080 | Msa1398790 | 0.809325 | 2.001177e-50 | -8.615850e-47 |
| Msa1030080 | Msa1403570 | 0.816847 | 4.478177e-52 | -8.615850e-47 |
| Msa1030080 | Msa1411950 | 0.806488 | 8.027370e-50 | -8.615850e-47 |
| Msa1030080 | Msa1418240 | 0.801924 | 7.157007e-49 | -8.615850e-47 |
| Msa1030080 | Msa1418500 | 0.809520 | 1.816585e-50 | -8.615850e-47 |
| Msa1030080 | Msa1427160 | 0.827232 | 1.752403e-54 | -8.615850e-47 |
| Msa1030080 | Msa1434090 | 0.800471 | 1.419375e-48 | -8.615850e-47 |
| Msa1030080 | Msa1459960 | 0.803840 | 2.876369e-49 | -8.615850e-47 |
| Msa1030080 | Msa1462910 | 0.808353 | 3.229207e-50 | -8.615850e-47 |
| Msa0241830 | Msa1030080 | 0.835916 | 1.269568e-56 | -8.615850e-47 |
| Msa0245430 | Msa1030080 | 0.821926 | 3.114372e-53 | -8.615850e-47 |
| Msa0245580 | Msa1030080 | 0.804097 | 2.543641e-49 | -8.615850e-47 |
| Msa0249580 | Msa1030080 | 0.822573 | 2.204148e-53 | -8.615850e-47 |
| Msa0261170 | Msa1030080 | 0.827534 | 1.483606e-54 | -8.615850e-47 |
| Msa0262480 | Msa1030080 | 0.831477 | 1.632923e-55 | -8.615850e-47 |
| Msa0270210 | Msa1030080 | 0.834374 | 3.110889e-56 | -8.615850e-47 |
| Msa0283420 | Msa1030080 | 0.816863 | 4.440450e-52 | -8.615850e-47 |
| Msa0296250 | Msa1030080 | 0.810978 | 8.807634e-51 | -8.615850e-47 |
| Msa0322900 | Msa1030080 | 0.838459 | 2.839495e-57 | -8.615850e-47 |
| Msa0485240 | Msa1030080 | 0.808643 | 2.800708e-50 | -8.615850e-47 |
| Msa0511770 | Msa1030080 | 0.821073 | 4.901708e-53 | -8.615850e-47 |
| Msa0518030 | Msa1030080 | 0.831749 | 1.399349e-55 | -8.615850e-47 |
| Msa0531650 | Msa1030080 | 0.817422 | 3.325479e-52 | -8.615850e-47 |
| Msa0534750 | Msa1030080 | 0.812122 | 4.969527e-51 | -8.615850e-47 |
| Msa0542470 | Msa1030080 | 0.811521 | 6.715748e-51 | -8.615850e-47 |
| Msa0547990 | Msa1030080 | 0.837054 | 6.518411e-57 | -8.615850e-47 |
| Msa0892640 | Msa1030080 | 0.836641 | 8.309219e-57 | -8.615850e-47 |
| Msa0903780 | Msa1030080 | 0.810880 | 9.248595e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030080 | MtrunA17_Chr7g0250781 | 88.732 | 213 | 8 | 3 | 1 | 198 | 1 | 212 | 4.29e-122 | 344 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030080 | AT1G67060.1 | 73.810 | 210 | 40 | 3 | 3 | 198 | 5 | 213 | 9.12e-102 | 293 |
| Msa1030080 | AT1G67060.2 | 79.286 | 140 | 26 | 2 | 61 | 198 | 8 | 146 | 4.46e-69 | 208 |
| Msa1030080 | AT1G67060.3 | 79.286 | 140 | 26 | 2 | 61 | 198 | 8 | 146 | 4.46e-69 | 208 |
Find 44 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATCTTGGTTCATCATTT+TGG | 0.061517 | 7_1:-63934178 | Msa1030080:CDS |
| ATATCGACTCTGTTCTATTT+TGG | 0.116444 | 7_1:-63932230 | Msa1030080:three_prime_UTR |
| CCTTGCCCTTGTAATGGTTT+TGG | 0.181287 | 7_1:-63933421 | Msa1030080:CDS |
| CAAAAGCAATGAAGAGTTTC+TGG | 0.208058 | 7_1:+63937057 | None:intergenic |
| GTTGTGTTTGGTTAAATAAA+AGG | 0.242560 | 7_1:+63937182 | None:intergenic |
| AACACAGTGATGAGCTTAAA+AGG | 0.297704 | 7_1:+63936079 | None:intergenic |
| GAATGACATAGCGAAGGATA+TGG | 0.348587 | 7_1:+63933775 | None:intergenic |
| AGGGGTTATAGAACTATTCT+TGG | 0.370314 | 7_1:-63935523 | Msa1030080:CDS |
| TGGTTTAGGGTGGGTGGAAA+AGG | 0.370667 | 7_1:+63937217 | None:intergenic |
| AAATTATTATCAAAATTGAT+AGG | 0.370755 | 7_1:-63931779 | Msa1030080:three_prime_UTR |
| AAACTGTAGCAATGGCAAAC+TGG | 0.378936 | 7_1:-63937106 | Msa1030080:exon |
| TGGTTGCTTTCTTGCTGCTC+TGG | 0.389334 | 7_1:-63934102 | Msa1030080:CDS |
| GTATCCAAGCTGTTTGTTGC+CGG | 0.391422 | 7_1:-63932257 | Msa1030080:three_prime_UTR |
| ACATTTACAGATTGAGAAAT+CGG | 0.393816 | 7_1:-63932279 | Msa1030080:intron |
| TTGTGTTTGGTTAAATAAAA+GGG | 0.404882 | 7_1:+63937183 | None:intergenic |
| TCTGGTTATTGTGCTCTTTG+TGG | 0.424444 | 7_1:-63934084 | Msa1030080:CDS |
| GTCTGCCCTTGCCCTTGTAA+TGG | 0.430059 | 7_1:-63933427 | Msa1030080:CDS |
| CGCTATGTCATTCTCTTCAT+CGG | 0.432806 | 7_1:-63933765 | Msa1030080:intron |
| ATGATGCTATGGGAGTAATA+TGG | 0.436081 | 7_1:+63932140 | None:intergenic |
| GAACAGAGTCGATATCTTGC+CGG | 0.452821 | 7_1:+63932238 | None:intergenic |
| AACTGTAGCAATGGCAAACT+GGG | 0.462821 | 7_1:-63937105 | Msa1030080:exon |
| GACTCAAACTTTGAAAGGTA+GGG | 0.468284 | 7_1:-63935542 | Msa1030080:CDS |
| GGCTGCAAAGAATGATGCTA+TGG | 0.471853 | 7_1:+63932129 | None:intergenic |
| CTTACTGCAAGGATTGCTGC+TGG | 0.492007 | 7_1:-63934122 | Msa1030080:CDS |
| CCCCACCCAAAACCATTACA+AGG | 0.500731 | 7_1:+63933415 | None:intergenic |
| ATTGCCTGTTTGCTCACTTG+TGG | 0.516164 | 7_1:-63936034 | Msa1030080:CDS |
| CTGTTTGCTCACTTGTGGCA+AGG | 0.521314 | 7_1:-63936029 | Msa1030080:intron |
| AGACTCAAACTTTGAAAGGT+AGG | 0.523159 | 7_1:-63935543 | Msa1030080:CDS |
| CTTGCCACAAGTGAGCAAAC+AGG | 0.537453 | 7_1:+63936030 | None:intergenic |
| TGTCAGACTCAAACTTTGAA+AGG | 0.537532 | 7_1:-63935547 | Msa1030080:intron |
| CTACAAATATTCTTACTGCA+AGG | 0.548085 | 7_1:-63934133 | Msa1030080:CDS |
| ACTCAAACTTTGAAAGGTAG+GGG | 0.552864 | 7_1:-63935541 | Msa1030080:CDS |
| GTTTAAGGAAACTGTAGCAA+TGG | 0.563209 | 7_1:-63937114 | Msa1030080:exon |
| CTTGCCGGCAACAAACAGCT+TGG | 0.570611 | 7_1:+63932253 | None:intergenic |
| ACACTGCGGGGACTCTGTAT+CGG | 0.572546 | 7_1:-63933938 | Msa1030080:intron |
| TTTGGTTAAATAAAAGGGAG+CGG | 0.572775 | 7_1:+63937188 | None:intergenic |
| CCAAAACCATTACAAGGGCA+AGG | 0.586840 | 7_1:+63933421 | None:intergenic |
| GCTGCAAAGAATGATGCTAT+GGG | 0.628527 | 7_1:+63932130 | None:intergenic |
| TGAAGAGAATGACATAGCGA+AGG | 0.629946 | 7_1:+63933769 | None:intergenic |
| AAAGGTGAGAGAAAGTTGCA+AGG | 0.647876 | 7_1:+63937235 | None:intergenic |
| CAAAACCATTACAAGGGCAA+GGG | 0.650178 | 7_1:+63933422 | None:intergenic |
| CCCACCCAAAACCATTACAA+GGG | 0.672104 | 7_1:+63933416 | None:intergenic |
| TGTGGTGATTACAGCTATGG+AGG | 0.679407 | 7_1:-63936117 | Msa1030080:intron |
| AGGTACGAGGAGGATGACAA+CGG | 0.703171 | 7_1:+63937022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAGTTTTTATTTTTTTTAA+TGG | - | chr7_1:63934029-63934048 | Msa1030080:intron | 10.0% |
| !!! | TTTTCAGTTTTAATAAAATA+AGG | + | chr7_1:63934148-63934167 | None:intergenic | 10.0% |
| !!! | ATTTTACAATTAAAATAATC+AGG | + | chr7_1:63934456-63934475 | None:intergenic | 10.0% |
| !!! | ATCAATTTTGATAATAATTT+AGG | + | chr7_1:63937284-63937303 | None:intergenic | 10.0% |
| !! | AAATTATTATCAAAATTGAT+AGG | - | chr7_1:63937284-63937303 | Msa1030080:five_prime_UTR | 10.0% |
| !! | AAAAAATTGCTTATAAGAAA+AGG | + | chr7_1:63931796-63931815 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGTTGTGTT+TGG | + | chr7_1:63931896-63931915 | None:intergenic | 15.0% |
| !!! | AATTAAAATTTGTTTGAGAT+TGG | - | chr7_1:63932451-63932470 | Msa1030080:intron | 15.0% |
| !!! | GATGTATTTTTTTTGTTTTT+TGG | - | chr7_1:63932866-63932885 | Msa1030080:intron | 15.0% |
| !!! | CTGTATTTTTAATTAATTTG+TGG | - | chr7_1:63933828-63933847 | Msa1030080:CDS | 15.0% |
| !! | ATATTTATAAACCTCATTAT+TGG | + | chr7_1:63934744-63934763 | None:intergenic | 15.0% |
| !! | TCTTTACAAAAATAGATTAT+TGG | - | chr7_1:63935863-63935882 | Msa1030080:intron | 15.0% |
| !! | CTTTACAAAAATAGATTATT+GGG | - | chr7_1:63935864-63935883 | Msa1030080:intron | 15.0% |
| !! | GATAATATTTAGATTTAGAT+AGG | + | chr7_1:63936448-63936467 | None:intergenic | 15.0% |
| !!! | GTGTTTTTTTGATAAAATTA+TGG | + | chr7_1:63936727-63936746 | None:intergenic | 15.0% |
| !! | TTGTGTTTGGTTAAATAAAA+GGG | + | chr7_1:63931883-63931902 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTGTTGAGTTTA+AGG | - | chr7_1:63931934-63931953 | Msa1030080:intron | 20.0% |
| !!! | ATTTAGGATTTATTCTGATT+AGG | + | chr7_1:63932656-63932675 | None:intergenic | 20.0% |
| !!! | CAATTGAATTTTTCAAAACA+AGG | - | chr7_1:63932723-63932742 | Msa1030080:intron | 20.0% |
| !! | TAGTATATGATAAAAGACTA+AGG | + | chr7_1:63932755-63932774 | None:intergenic | 20.0% |
| !! | ATACATCACATAAATATCTA+AGG | + | chr7_1:63932853-63932872 | None:intergenic | 20.0% |
| !!! | ATTTTGTTGCATTTTATACA+CGG | - | chr7_1:63933344-63933363 | Msa1030080:intron | 20.0% |
| !!! | TATAATTCATTTTGATGTCA+AGG | + | chr7_1:63933658-63933677 | None:intergenic | 20.0% |
| !! | TGAATTATATGAACAGATAA+AGG | - | chr7_1:63933669-63933688 | Msa1030080:intron | 20.0% |
| !! | GAATTATATGAACAGATAAA+GGG | - | chr7_1:63933670-63933689 | Msa1030080:intron | 20.0% |
| !! | AATTATATGAACAGATAAAG+GGG | - | chr7_1:63933671-63933690 | Msa1030080:intron | 20.0% |
| !!! | TACAATCTTCTGAAATAAAA+AGG | - | chr7_1:63935158-63935177 | Msa1030080:intron | 20.0% |
| !!! | CTAATTATGATTTGATTTTC+AGG | - | chr7_1:63935424-63935443 | Msa1030080:intron | 20.0% |
| !! | AAAATGAAACGTATAAAAAG+TGG | + | chr7_1:63935491-63935510 | None:intergenic | 20.0% |
| !!! | TATACGTTTCATTTTCAATT+TGG | - | chr7_1:63935496-63935515 | Msa1030080:intron | 20.0% |
| !! | ATTCAATCAAATGATATAAG+TGG | + | chr7_1:63935540-63935559 | None:intergenic | 20.0% |
| !!! | TCATTTGATTGAATTTTGTA+TGG | - | chr7_1:63935546-63935565 | Msa1030080:intron | 20.0% |
| !! | AAATTTCAATCCTATAAAAC+CGG | + | chr7_1:63935744-63935763 | None:intergenic | 20.0% |
| !! | AGTGAATTCACAAAATAAAT+AGG | - | chr7_1:63936004-63936023 | Msa1030080:intron | 20.0% |
| !! | ATTCACAAAATAAATAGGAT+AGG | - | chr7_1:63936009-63936028 | Msa1030080:intron | 20.0% |
| !!! | TATAATGTATTCCACTTTTA+GGG | - | chr7_1:63936201-63936220 | Msa1030080:intron | 20.0% |
| !! | CATGAAAGTAATTTGATTAT+TGG | + | chr7_1:63936541-63936560 | None:intergenic | 20.0% |
| !!! | ATACATTTTTTTTCAATTGC+TGG | - | chr7_1:63936887-63936906 | Msa1030080:intron | 20.0% |
| !!! | TACATTTTTTTTCAATTGCT+GGG | - | chr7_1:63936888-63936907 | Msa1030080:intron | 20.0% |
| !! | AATATTGCATATCACAATTT+AGG | + | chr7_1:63937160-63937179 | None:intergenic | 20.0% |
| ! | GTTGTGTTTGGTTAAATAAA+AGG | + | chr7_1:63931884-63931903 | None:intergenic | 25.0% |
| ! | TAGAAAAGAGCTTATGAATT+TGG | - | chr7_1:63932224-63932243 | Msa1030080:three_prime_UTR | 25.0% |
| !!! | TGCTCTATTGATTTGTTTTT+TGG | - | chr7_1:63932264-63932283 | Msa1030080:three_prime_UTR | 25.0% |
| ! | CTCATTTGCAATTAAAATCA+AGG | - | chr7_1:63932311-63932330 | Msa1030080:intron | 25.0% |
| ! | TATGATAAAAGACTAAGGTA+AGG | + | chr7_1:63932750-63932769 | None:intergenic | 25.0% |
| ! | TTTATGTGCTACATTGAATT+TGG | - | chr7_1:63932779-63932798 | Msa1030080:intron | 25.0% |
| ! | AAACATGAAACATGTTATAG+AGG | + | chr7_1:63933127-63933146 | None:intergenic | 25.0% |
| ! | ACCAACTAAAAATTATTAGC+AGG | - | chr7_1:63933385-63933404 | Msa1030080:intron | 25.0% |
| ! | CCAACTAAAAATTATTAGCA+GGG | - | chr7_1:63933386-63933405 | Msa1030080:intron | 25.0% |
| ! | AGATTGTAAAGTTAGTTAAC+CGG | - | chr7_1:63933423-63933442 | Msa1030080:CDS | 25.0% |
| ! | ATTATATGAACAGATAAAGG+GGG | - | chr7_1:63933672-63933691 | Msa1030080:intron | 25.0% |
| ! | ATTATGGATTCATAGATTCA+AGG | - | chr7_1:63933889-63933908 | Msa1030080:intron | 25.0% |
| ! | TTAATAAAATAAGGCTGATG+AGG | + | chr7_1:63934139-63934158 | None:intergenic | 25.0% |
| !! | CTCTATTTGGTAAAAAGTAT+CGG | + | chr7_1:63934600-63934619 | None:intergenic | 25.0% |
| ! | TTTATAAACCTCATTATTGG+CGG | + | chr7_1:63934741-63934760 | None:intergenic | 25.0% |
| !!! | AAATCATATGCTTGCTTTTA+AGG | + | chr7_1:63934808-63934827 | None:intergenic | 25.0% |
| !!! | GTATTTACCATTTTTCTGAT+TGG | - | chr7_1:63934854-63934873 | Msa1030080:intron | 25.0% |
| ! | AGAAAAACCAATCAGAAAAA+TGG | + | chr7_1:63934864-63934883 | None:intergenic | 25.0% |
| ! | TTCTTGATCAATGAATATCA+GGG | - | chr7_1:63935215-63935234 | Msa1030080:intron | 25.0% |
| !!! | TTGTTTTTATTGCTGTGATT+TGG | - | chr7_1:63935242-63935261 | Msa1030080:intron | 25.0% |
| !!! | TGTCATTTCTTTGAAATGTA+TGG | - | chr7_1:63935383-63935402 | Msa1030080:intron | 25.0% |
| !!! | AACAGTTTGTTTTCAGTTTA+TGG | - | chr7_1:63935454-63935473 | Msa1030080:intron | 25.0% |
| !!! | ATTTGGTGAGTTTTTTCTTA+TGG | - | chr7_1:63935675-63935694 | Msa1030080:intron | 25.0% |
| !!! | GGTTTTATAGGATTGAAATT+TGG | - | chr7_1:63935743-63935762 | Msa1030080:intron | 25.0% |
| !!! | TAGTGGGCTTTATTTATTAT+AGG | + | chr7_1:63935789-63935808 | None:intergenic | 25.0% |
| ! | AAACGAGCATAAAAAATAGT+GGG | + | chr7_1:63935805-63935824 | None:intergenic | 25.0% |
| ! | AAAACGAGCATAAAAAATAG+TGG | + | chr7_1:63935806-63935825 | None:intergenic | 25.0% |
| ! | TGGATGATTAATAAGGAAAA+AGG | - | chr7_1:63936036-63936055 | Msa1030080:CDS | 25.0% |
| ! | ATGCTTATCATCTTTAACAT+TGG | - | chr7_1:63936071-63936090 | Msa1030080:CDS | 25.0% |
| ! | AGATGAAGAAAATACGATAA+CGG | - | chr7_1:63936094-63936113 | Msa1030080:CDS | 25.0% |
| ! | AAGTGGAATACATTATAGAA+AGG | + | chr7_1:63936198-63936217 | None:intergenic | 25.0% |
| !!! | CTATAATGTATTCCACTTTT+AGG | - | chr7_1:63936200-63936219 | Msa1030080:intron | 25.0% |
| !!! | ATAATGTATTCCACTTTTAG+GGG | - | chr7_1:63936202-63936221 | Msa1030080:intron | 25.0% |
| ! | TAGATTTAGATAGGAGAAAA+AGG | + | chr7_1:63936439-63936458 | None:intergenic | 25.0% |
| ! | AGTAATTTGATTATTGGAGA+AGG | + | chr7_1:63936535-63936554 | None:intergenic | 25.0% |
| ! | ACATTTACAGATTGAGAAAT+CGG | - | chr7_1:63936784-63936803 | Msa1030080:intron | 25.0% |
| !!! | ATTGCTTTTGTATATGAAAC+TGG | - | chr7_1:63936982-63937001 | Msa1030080:intron | 25.0% |
| !!! | GGTTTTATCTATCAATGTAT+TGG | + | chr7_1:63937263-63937282 | None:intergenic | 25.0% |
| TTTGGTTAAATAAAAGGGAG+CGG | + | chr7_1:63931878-63931897 | None:intergenic | 30.0% | |
| !! | AAACTCTTCATTGCTTTTGT+TGG | - | chr7_1:63932010-63932029 | Msa1030080:intron | 30.0% |
| CCTCAACAATAAAGAACAAT+GGG | + | chr7_1:63932092-63932111 | None:intergenic | 30.0% | |
| TCCTCAACAATAAAGAACAA+TGG | + | chr7_1:63932093-63932112 | None:intergenic | 30.0% | |
| ! | AAACTACGAAGTTTAAGATC+TGG | + | chr7_1:63932417-63932436 | None:intergenic | 30.0% |
| AGTTTGGTAGATAGATCAAT+TGG | - | chr7_1:63932626-63932645 | Msa1030080:intron | 30.0% | |
| GTTTGGTAGATAGATCAATT+GGG | - | chr7_1:63932627-63932646 | Msa1030080:intron | 30.0% | |
| GTTATGCTAATACTTTGTTG+TGG | - | chr7_1:63932928-63932947 | Msa1030080:intron | 30.0% | |
| CAAGGTAAAACTTTAAACGT+AGG | - | chr7_1:63933052-63933071 | Msa1030080:intron | 30.0% | |
| TTCACTAGCAACTTATCTAT+TGG | - | chr7_1:63933313-63933332 | Msa1030080:intron | 30.0% | |
| !!! | CCCTGCTAATAATTTTTAGT+TGG | + | chr7_1:63933389-63933408 | None:intergenic | 30.0% |
| TAAAAATTATTAGCAGGGCA+TGG | - | chr7_1:63933391-63933410 | Msa1030080:intron | 30.0% | |
| GACAATCACTAAGATCATTA+AGG | + | chr7_1:63933483-63933502 | None:intergenic | 30.0% | |
| !!! | AAGTTTTGATTTGACAACGA+GGG | - | chr7_1:63933596-63933615 | Msa1030080:intron | 30.0% |
| AAGATTCTTGCATGTTTACA+AGG | + | chr7_1:63933788-63933807 | None:intergenic | 30.0% | |
| ACTATCCAGCTTACAAATTA+TGG | - | chr7_1:63933873-63933892 | Msa1030080:intron | 30.0% | |
| ! | TGAATCCATAATTTGTAAGC+TGG | + | chr7_1:63933881-63933900 | None:intergenic | 30.0% |
| TAACATGAAGCAGAATGTAT+TGG | + | chr7_1:63934086-63934105 | None:intergenic | 30.0% | |
| GCATGCATTGGAAATAAATA+TGG | + | chr7_1:63934205-63934224 | None:intergenic | 30.0% | |
| !! | ATTGTTACTTTGATGCCAAT+AGG | - | chr7_1:63934231-63934250 | Msa1030080:intron | 30.0% |
| ATATGCGAACTGAAAACTAT+TGG | + | chr7_1:63934356-63934375 | None:intergenic | 30.0% | |
| ! | CAGATTGAATTTGAAGTGTT+TGG | + | chr7_1:63934549-63934568 | None:intergenic | 30.0% |
| CAGAAGATTTAGTCTCTATT+TGG | + | chr7_1:63934613-63934632 | None:intergenic | 30.0% | |
| !!! | TTCTGAAGCCAATTTTGAAA+TGG | - | chr7_1:63934628-63934647 | Msa1030080:intron | 30.0% |
| !!! | TCTGAAGCCAATTTTGAAAT+GGG | - | chr7_1:63934629-63934648 | Msa1030080:intron | 30.0% |
| ATAAAGCCCCATTTCAAAAT+TGG | + | chr7_1:63934639-63934658 | None:intergenic | 30.0% | |
| TTATAAACCTCATTATTGGC+GGG | + | chr7_1:63934740-63934759 | None:intergenic | 30.0% | |
| TCAATGCTATAAACCTTGAA+TGG | - | chr7_1:63934765-63934784 | Msa1030080:intron | 30.0% | |
| !!! | TATGCTTGCTTTTAAGGTTT+GGG | + | chr7_1:63934802-63934821 | None:intergenic | 30.0% |
| !!! | ATATGCTTGCTTTTAAGGTT+TGG | + | chr7_1:63934803-63934822 | None:intergenic | 30.0% |
| ! | AGATCTTGGTTCATCATTTT+GGG | - | chr7_1:63934886-63934905 | Msa1030080:intron | 30.0% |
| CTACAAATATTCTTACTGCA+AGG | - | chr7_1:63934930-63934949 | Msa1030080:intron | 30.0% | |
| AAAGGAAAGACGATATCATT+AGG | - | chr7_1:63935176-63935195 | Msa1030080:intron | 30.0% | |
| AAGGAAAGACGATATCATTA+GGG | - | chr7_1:63935177-63935196 | Msa1030080:intron | 30.0% | |
| CTTCTTGATCAATGAATATC+AGG | - | chr7_1:63935214-63935233 | Msa1030080:intron | 30.0% | |
| ! | TCGATACAAAAAAGTCCTTT+TGG | - | chr7_1:63935707-63935726 | Msa1030080:intron | 30.0% |
| AACATCTGCAAAGTTATTGT+AGG | - | chr7_1:63935909-63935928 | Msa1030080:intron | 30.0% | |
| GAATTACCCACTTTCTTATT+TGG | - | chr7_1:63935959-63935978 | Msa1030080:intron | 30.0% | |
| AAATAAATAGGATAGGACAG+TGG | - | chr7_1:63936016-63936035 | Msa1030080:intron | 30.0% | |
| AAATCTTTCCATAACCACTT+GGG | - | chr7_1:63936326-63936345 | Msa1030080:intron | 30.0% | |
| ATTGATCACAGATAACCATT+CGG | - | chr7_1:63936363-63936382 | Msa1030080:intron | 30.0% | |
| TTTACATTCTTTACACCGAA+TGG | + | chr7_1:63936381-63936400 | None:intergenic | 30.0% | |
| !! | ATTCGGTGTAAAGAATGTAA+AGG | - | chr7_1:63936380-63936399 | Msa1030080:intron | 30.0% |
| TATTATCACATTATGCACAC+TGG | - | chr7_1:63936461-63936480 | Msa1030080:intron | 30.0% | |
| AAAAGAGAAAATTGAGCTCT+CGG | + | chr7_1:63936568-63936587 | None:intergenic | 30.0% | |
| AACTCGTCATCAATAATAAC+TGG | + | chr7_1:63936646-63936665 | None:intergenic | 30.0% | |
| !!! | ATATCGACTCTGTTCTATTT+TGG | - | chr7_1:63936833-63936852 | Msa1030080:intron | 30.0% |
| ! | ATTCTTTGCAGCCTATATTT+TGG | - | chr7_1:63936944-63936963 | Msa1030080:intron | 30.0% |
| ! | TTCTTTGCAGCCTATATTTT+GGG | - | chr7_1:63936945-63936964 | Msa1030080:intron | 30.0% |
| ! | GTGTTATTGAGAAAAAAGAG+AGG | - | chr7_1:63937115-63937134 | Msa1030080:exon | 30.0% |
| TATTGAGAAAAAAGAGAGGT+AGG | - | chr7_1:63937119-63937138 | Msa1030080:five_prime_UTR | 30.0% | |
| ATTGAGAAAAAAGAGAGGTA+GGG | - | chr7_1:63937120-63937139 | Msa1030080:five_prime_UTR | 30.0% | |
| TATTGATATGTCGAAGAAGT+AGG | - | chr7_1:63937208-63937227 | Msa1030080:five_prime_UTR | 30.0% | |
| !!! | ATAAAAGGGAGCGGTTTTTT+TGG | + | chr7_1:63931869-63931888 | None:intergenic | 35.0% |
| GTTTAAGGAAACTGTAGCAA+TGG | - | chr7_1:63931949-63931968 | Msa1030080:intron | 35.0% | |
| CAAAAGCAATGAAGAGTTTC+TGG | + | chr7_1:63932009-63932028 | None:intergenic | 35.0% | |
| CCCATTGTTCTTTATTGTTG+AGG | - | chr7_1:63932089-63932108 | Msa1030080:intron | 35.0% | |
| TTAGTGATTGCATGCTCATA+TGG | - | chr7_1:63932376-63932395 | Msa1030080:intron | 35.0% | |
| ! | AATCTCAGATTAGTTGTGAC+TGG | - | chr7_1:63932598-63932617 | Msa1030080:intron | 35.0% |
| CACACATTCAGGTAGTATTT+AGG | + | chr7_1:63932672-63932691 | None:intergenic | 35.0% | |
| ! | GGATTGTTGTTAAAACAGTG+AGG | - | chr7_1:63932800-63932819 | Msa1030080:intron | 35.0% |
| TGTTGTTAAAACAGTGAGGT+TGG | - | chr7_1:63932804-63932823 | Msa1030080:intron | 35.0% | |
| AACACAGTGATGAGCTTAAA+AGG | + | chr7_1:63932987-63933006 | None:intergenic | 35.0% | |
| CTGTATGTTCATGTTCTTCA+GGG | + | chr7_1:63933166-63933185 | None:intergenic | 35.0% | |
| TCTGTATGTTCATGTTCTTC+AGG | + | chr7_1:63933167-63933186 | None:intergenic | 35.0% | |
| GATAAGTTGCTAGTGAACAA+TGG | + | chr7_1:63933310-63933329 | None:intergenic | 35.0% | |
| ! | TGCATTTTATACACGGATGA+TGG | - | chr7_1:63933351-63933370 | Msa1030080:intron | 35.0% |
| TGTCAGACTCAAACTTTGAA+AGG | - | chr7_1:63933516-63933535 | Msa1030080:intron | 35.0% | |
| ! | AGACTCAAACTTTGAAAGGT+AGG | - | chr7_1:63933520-63933539 | Msa1030080:intron | 35.0% |
| ! | GACTCAAACTTTGAAAGGTA+GGG | - | chr7_1:63933521-63933540 | Msa1030080:intron | 35.0% |
| ! | ACTCAAACTTTGAAAGGTAG+GGG | - | chr7_1:63933522-63933541 | Msa1030080:intron | 35.0% |
| AGGGGTTATAGAACTATTCT+TGG | - | chr7_1:63933540-63933559 | Msa1030080:intron | 35.0% | |
| !!! | TTACGCTCTTTTGAAGCTAT+TGG | - | chr7_1:63933573-63933592 | Msa1030080:intron | 35.0% |
| !!! | GAAGTTTTGATTTGACAACG+AGG | - | chr7_1:63933595-63933614 | Msa1030080:intron | 35.0% |
| AAGGGGGAAAAACACAAAAA+AGG | - | chr7_1:63933688-63933707 | Msa1030080:intron | 35.0% | |
| TACTGTCATGGAATACAAAC+AGG | + | chr7_1:63933716-63933735 | None:intergenic | 35.0% | |
| AAGAACTTGTAGTACTGTCA+TGG | + | chr7_1:63933728-63933747 | None:intergenic | 35.0% | |
| ! | CATAGTTCCTAAGAGTATGA+AGG | + | chr7_1:63933765-63933784 | None:intergenic | 35.0% |
| TGCTTCATGTTAGCATTATG+TGG | - | chr7_1:63934094-63934113 | Msa1030080:CDS | 35.0% | |
| AACAATGATTCAGCATGCAT+TGG | + | chr7_1:63934217-63934236 | None:intergenic | 35.0% | |
| AAAAATGCATTACATCCAGC+AGG | + | chr7_1:63934331-63934350 | None:intergenic | 35.0% | |
| TCGCATATTAACTCTGAGTT+AGG | - | chr7_1:63934368-63934387 | Msa1030080:intron | 35.0% | |
| TCGGATAAGTTAGCAGATAA+AGG | + | chr7_1:63934581-63934600 | None:intergenic | 35.0% | |
| !!! | CTGAAGCCAATTTTGAAATG+GGG | - | chr7_1:63934630-63934649 | Msa1030080:intron | 35.0% |
| !! | GTGGTGTTGTTAGTATCAAA+AGG | + | chr7_1:63934669-63934688 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTTCTCCAGATCT+TGG | - | chr7_1:63934872-63934891 | Msa1030080:intron | 35.0% |
| CAAAATGATGAACCAAGATC+TGG | + | chr7_1:63934887-63934906 | None:intergenic | 35.0% | |
| ! | CAGATCTTGGTTCATCATTT+TGG | - | chr7_1:63934885-63934904 | Msa1030080:intron | 35.0% |
| ! | GATCTTGGTTCATCATTTTG+GGG | - | chr7_1:63934887-63934906 | Msa1030080:intron | 35.0% |
| ATGTTAGCGAGACAGAAAAA+GGG | + | chr7_1:63935086-63935105 | None:intergenic | 35.0% | |
| TATGTTAGCGAGACAGAAAA+AGG | + | chr7_1:63935087-63935106 | None:intergenic | 35.0% | |
| ACATACCCTTATCCAAAAAG+TGG | - | chr7_1:63935102-63935121 | Msa1030080:intron | 35.0% | |
| !!! | AGTGTCCACTTTTTGGATAA+GGG | + | chr7_1:63935110-63935129 | None:intergenic | 35.0% |
| TATTTGAAGAACACGTGAAG+AGG | + | chr7_1:63935335-63935354 | None:intergenic | 35.0% | |
| !! | AAATATTTTGAACCTGTCCC+TGG | - | chr7_1:63935350-63935369 | Msa1030080:intron | 35.0% |
| AATGACACATATACCAACCA+GGG | + | chr7_1:63935370-63935389 | None:intergenic | 35.0% | |
| AAATGACACATATACCAACC+AGG | + | chr7_1:63935371-63935390 | None:intergenic | 35.0% | |
| ! | TTACCCACTTTCTTATTTGG+TGG | - | chr7_1:63935962-63935981 | Msa1030080:intron | 35.0% |
| ! | TACCCACTTTCTTATTTGGT+GGG | - | chr7_1:63935963-63935982 | Msa1030080:intron | 35.0% |
| TTCCCACCAAATAAGAAAGT+GGG | + | chr7_1:63935968-63935987 | None:intergenic | 35.0% | |
| AGGACAGTGGATGATTAATA+AGG | - | chr7_1:63936029-63936048 | Msa1030080:intron | 35.0% | |
| AACGGTAATAGTATAGCCAT+AGG | - | chr7_1:63936112-63936131 | Msa1030080:intron | 35.0% | |
| ACGGTAATAGTATAGCCATA+GGG | - | chr7_1:63936113-63936132 | Msa1030080:intron | 35.0% | |
| ATGATAATATGACCAGTCCA+AGG | + | chr7_1:63936264-63936283 | None:intergenic | 35.0% | |
| CAAATCTTTCCATAACCACT+TGG | - | chr7_1:63936325-63936344 | Msa1030080:intron | 35.0% | |
| ! | ATTTTCAACCCAAGTGGTTA+TGG | + | chr7_1:63936337-63936356 | None:intergenic | 35.0% |
| ATGATGCTATGGGAGTAATA+TGG | + | chr7_1:63936926-63936945 | None:intergenic | 35.0% | |
| TTGAGAAAAAAGAGAGGTAG+GGG | - | chr7_1:63937121-63937140 | Msa1030080:five_prime_UTR | 35.0% | |
| AAAGGTGAGAGAAAGTTGCA+AGG | + | chr7_1:63931831-63931850 | None:intergenic | 40.0% | |
| !!! | TTTTTTTGGTTTAGGGTGGG+TGG | + | chr7_1:63931855-63931874 | None:intergenic | 40.0% |
| !!! | CGGTTTTTTTGGTTTAGGGT+GGG | + | chr7_1:63931858-63931877 | None:intergenic | 40.0% |
| !!! | GGAGCGGTTTTTTTGGTTTA+GGG | + | chr7_1:63931862-63931881 | None:intergenic | 40.0% |
| AAACTGTAGCAATGGCAAAC+TGG | - | chr7_1:63931957-63931976 | Msa1030080:intron | 40.0% | |
| AACTGTAGCAATGGCAAACT+GGG | - | chr7_1:63931958-63931977 | Msa1030080:intron | 40.0% | |
| TCAATGACTGCATGGAATCT+CGG | + | chr7_1:63932338-63932357 | None:intergenic | 40.0% | |
| CATGCTCATATGGTCAAGAT+CGG | - | chr7_1:63932386-63932405 | Msa1030080:intron | 40.0% | |
| ACAATCTGATCAAGACCAGA+CGG | + | chr7_1:63932478-63932497 | None:intergenic | 40.0% | |
| GTTGTGACTGGATCAAAGTT+TGG | - | chr7_1:63932610-63932629 | Msa1030080:intron | 40.0% | |
| GTTGTTGAGTTCACACATTC+AGG | + | chr7_1:63932683-63932702 | None:intergenic | 40.0% | |
| AATGTGTGAACTCAACAACC+AGG | - | chr7_1:63932684-63932703 | Msa1030080:intron | 40.0% | |
| TGTCAAATGTGAAGTCAACC+TGG | + | chr7_1:63932705-63932724 | None:intergenic | 40.0% | |
| TACAATGTCATGTGTCTCAG+TGG | - | chr7_1:63932889-63932908 | Msa1030080:intron | 40.0% | |
| TGTTGTGGTGATTACAGCTA+TGG | - | chr7_1:63932943-63932962 | Msa1030080:intron | 40.0% | |
| TCAAAACCGCAGAGAATTTC+TGG | - | chr7_1:63933235-63933254 | Msa1030080:intron | 40.0% | |
| CAAAACCGCAGAGAATTTCT+GGG | - | chr7_1:63933236-63933255 | Msa1030080:intron | 40.0% | |
| AACAGCAATAAGAGCCACTT+TGG | + | chr7_1:63933263-63933282 | None:intergenic | 40.0% | |
| AGTTGCTAGTGAACAATGGT+TGG | + | chr7_1:63933306-63933325 | None:intergenic | 40.0% | |
| AGATCATTAAGGCAAAACCC+TGG | + | chr7_1:63933472-63933491 | None:intergenic | 40.0% | |
| TGTCTTGCCTTCATACTCTT+AGG | - | chr7_1:63933755-63933774 | Msa1030080:intron | 40.0% | |
| ! | CACTGATGCATTTGGAATTC+AGG | + | chr7_1:63933990-63934009 | None:intergenic | 40.0% |
| ! | ATTATGTGGTTTTCTGCTGC+TGG | - | chr7_1:63934108-63934127 | Msa1030080:CDS | 40.0% |
| ! | GTTACTTTGATGCCAATAGG+TGG | - | chr7_1:63934234-63934253 | Msa1030080:intron | 40.0% |
| ! | AATTCAGGTTCATGCAAACG+AGG | - | chr7_1:63934261-63934280 | Msa1030080:intron | 40.0% |
| ! | ATTCAGGTTCATGCAAACGA+GGG | - | chr7_1:63934262-63934281 | Msa1030080:intron | 40.0% |
| !! | TGGTTCATCATTTTGGGGAA+TGG | - | chr7_1:63934892-63934911 | Msa1030080:intron | 40.0% |
| TCTGGTTATTGTGCTCTTTG+TGG | - | chr7_1:63934979-63934998 | Msa1030080:intron | 40.0% | |
| !!! | CAGTGTCCACTTTTTGGATA+AGG | + | chr7_1:63935111-63935130 | None:intergenic | 40.0% |
| TATCCAAAAAGTGGACACTG+CGG | - | chr7_1:63935111-63935130 | Msa1030080:intron | 40.0% | |
| GAATGACATAGCGAAGGATA+TGG | + | chr7_1:63935291-63935310 | None:intergenic | 40.0% | |
| TGAAGAGAATGACATAGCGA+AGG | + | chr7_1:63935297-63935316 | None:intergenic | 40.0% | |
| CGCTATGTCATTCTCTTCAT+CGG | - | chr7_1:63935298-63935317 | Msa1030080:intron | 40.0% | |
| CAAAACCATTACAAGGGCAA+GGG | + | chr7_1:63935644-63935663 | None:intergenic | 40.0% | |
| ! | CTTGCCCTTGTAATGGTTTT+GGG | - | chr7_1:63935643-63935662 | Msa1030080:intron | 40.0% |
| CCTATAAAACCGGTAACTGT+TGG | + | chr7_1:63935734-63935753 | None:intergenic | 40.0% | |
| !!! | CCAACAGTTACCGGTTTTAT+AGG | - | chr7_1:63935731-63935750 | Msa1030080:intron | 40.0% |
| CTTCCCACCAAATAAGAAAG+TGG | + | chr7_1:63935969-63935988 | None:intergenic | 40.0% | |
| ! | TTCTTATTTGGTGGGAAGAG+AGG | - | chr7_1:63935971-63935990 | Msa1030080:intron | 40.0% |
| ! | TCTTATTTGGTGGGAAGAGA+GGG | - | chr7_1:63935972-63935991 | Msa1030080:intron | 40.0% |
| CGGTAATAGTATAGCCATAG+GGG | - | chr7_1:63936114-63936133 | Msa1030080:intron | 40.0% | |
| GGTAATAGTATAGCCATAGG+GGG | - | chr7_1:63936115-63936134 | Msa1030080:intron | 40.0% | |
| CGATATCATTCCCCTAAAAG+TGG | + | chr7_1:63936215-63936234 | None:intergenic | 40.0% | |
| !! | GGACTGGTCATATTATCATG+AGG | - | chr7_1:63936265-63936284 | Msa1030080:intron | 40.0% |
| ! | CAAGACATTTTCAACCCAAG+TGG | + | chr7_1:63936343-63936362 | None:intergenic | 40.0% |
| TTGGAGAAGGCGATTATGAT+GGG | + | chr7_1:63936522-63936541 | None:intergenic | 40.0% | |
| ATTGGAGAAGGCGATTATGA+TGG | + | chr7_1:63936523-63936542 | None:intergenic | 40.0% | |
| !!! | GATGACGAGTTGACGTTTTT+TGG | - | chr7_1:63936655-63936674 | Msa1030080:intron | 40.0% |
| GCTGCAAAGAATGATGCTAT+GGG | + | chr7_1:63936936-63936955 | None:intergenic | 40.0% | |
| !!! | AGCCTATATTTTGGGTTGCT+CGG | - | chr7_1:63936953-63936972 | Msa1030080:intron | 40.0% |
| TACCGAGCAACCCAAAATAT+AGG | + | chr7_1:63936958-63936977 | None:intergenic | 40.0% | |
| ! | ATTCATTAAGTTGCAGCGAC+AGG | - | chr7_1:63937177-63937196 | Msa1030080:five_prime_UTR | 40.0% |
| !!! | GCGGTTTTTTTGGTTTAGGG+TGG | + | chr7_1:63931859-63931878 | None:intergenic | 45.0% |
| !!! | GGGAGCGGTTTTTTTGGTTT+AGG | + | chr7_1:63931863-63931882 | None:intergenic | 45.0% |
| CTCATATGGTCAAGATCGGA+CGG | - | chr7_1:63932390-63932409 | Msa1030080:intron | 45.0% | |
| ! | TTGTTTGAGATTGGACCGTC+TGG | - | chr7_1:63932460-63932479 | Msa1030080:intron | 45.0% |
| CTCTAAGCTATTCAATCGCG+TGG | + | chr7_1:63932544-63932563 | None:intergenic | 45.0% | |
| CACGCGATTGAATAGCTTAG+AGG | - | chr7_1:63932542-63932561 | Msa1030080:intron | 45.0% | |
| TGTGGTGATTACAGCTATGG+AGG | - | chr7_1:63932946-63932965 | Msa1030080:intron | 45.0% | |
| ATTGCCTGTTTGCTCACTTG+TGG | - | chr7_1:63933029-63933048 | Msa1030080:intron | 45.0% | |
| TTGGTCCCAGAAATTCTCTG+CGG | + | chr7_1:63933244-63933263 | None:intergenic | 45.0% | |
| !! | GAGAATTTCTGGGACCAAAG+TGG | - | chr7_1:63933246-63933265 | Msa1030080:intron | 45.0% |
| AACCGGTGAGTTGCTTATGA+CGG | - | chr7_1:63933440-63933459 | Msa1030080:CDS | 45.0% | |
| ! | TTGATTTGACAACGAGGGAC+AGG | - | chr7_1:63933601-63933620 | Msa1030080:intron | 45.0% |
| !! | ACATGCAGCACTGATGCATT+TGG | + | chr7_1:63933998-63934017 | None:intergenic | 45.0% |
| AAAATAAGGCTGATGAGGCC+CGG | + | chr7_1:63934134-63934153 | None:intergenic | 45.0% | |
| ACTTTGATGCCAATAGGTGG+AGG | - | chr7_1:63934237-63934256 | Msa1030080:intron | 45.0% | |
| CTTTGATGCCAATAGGTGGA+GGG | - | chr7_1:63934238-63934257 | Msa1030080:intron | 45.0% | |
| ! | AGCTCTAACGCTACTTGAAG+TGG | + | chr7_1:63934414-63934433 | None:intergenic | 45.0% |
| CTCATTATTGGCGGGAACTT+AGG | + | chr7_1:63934732-63934751 | None:intergenic | 45.0% | |
| CTAAGTTCCCGCCAATAATG+AGG | - | chr7_1:63934730-63934749 | Msa1030080:intron | 45.0% | |
| GGTGTCTGTGTTTCCATTCA+AGG | + | chr7_1:63934781-63934800 | None:intergenic | 45.0% | |
| ATCCAAAAAGTGGACACTGC+GGG | - | chr7_1:63935112-63935131 | Msa1030080:intron | 45.0% | |
| ! | ATTTTGAACCTGTCCCTGGT+TGG | - | chr7_1:63935354-63935373 | Msa1030080:intron | 45.0% |
| CCAAAACCATTACAAGGGCA+AGG | + | chr7_1:63935645-63935664 | None:intergenic | 45.0% | |
| ! | CCTTGCCCTTGTAATGGTTT+TGG | - | chr7_1:63935642-63935661 | Msa1030080:intron | 45.0% |
| CCCACCCAAAACCATTACAA+GGG | + | chr7_1:63935650-63935669 | None:intergenic | 45.0% | |
| !!! | CCCTTGTAATGGTTTTGGGT+GGG | - | chr7_1:63935647-63935666 | Msa1030080:intron | 45.0% |
| !!! | CCTTGTAATGGTTTTGGGTG+GGG | - | chr7_1:63935648-63935667 | Msa1030080:intron | 45.0% |
| !! | GTTTTGGGTGGGGAGTTATT+TGG | - | chr7_1:63935658-63935677 | Msa1030080:intron | 45.0% |
| ! | CCTTTTGGACCAACAGTTAC+CGG | - | chr7_1:63935722-63935741 | Msa1030080:intron | 45.0% |
| CTATCTCACTTTACCCCCTA+TGG | + | chr7_1:63936131-63936150 | None:intergenic | 45.0% | |
| CTTTGCGCATCTTTGTACCT+TGG | - | chr7_1:63936244-63936263 | Msa1030080:intron | 45.0% | |
| ! | GTATCCAAGCTGTTTGTTGC+CGG | - | chr7_1:63936806-63936825 | Msa1030080:intron | 45.0% |
| GAACAGAGTCGATATCTTGC+CGG | + | chr7_1:63936828-63936847 | None:intergenic | 45.0% | |
| GGCTGCAAAGAATGATGCTA+TGG | + | chr7_1:63936937-63936956 | None:intergenic | 45.0% | |
| ! | TATGAAACTGGCTCATGCGT+CGG | - | chr7_1:63936994-63937013 | Msa1030080:intron | 45.0% |
| ! | TCGAGACTTGTTTCAGAGTG+AGG | - | chr7_1:63937061-63937080 | Msa1030080:CDS | 45.0% |
| ! | AGACTTGTTTCAGAGTGAGG+AGG | - | chr7_1:63937064-63937083 | Msa1030080:CDS | 45.0% |
| TTGTTTCAGAGTGAGGAGGA+TGG | - | chr7_1:63937068-63937087 | Msa1030080:CDS | 45.0% | |
| GAAAAAAGAGAGGTAGGGGA+TGG | - | chr7_1:63937125-63937144 | Msa1030080:five_prime_UTR | 45.0% | |
| ! | TGGTTTAGGGTGGGTGGAAA+AGG | + | chr7_1:63931849-63931868 | None:intergenic | 50.0% |
| AGGTACGAGGAGGATGACAA+CGG | + | chr7_1:63932044-63932063 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr7_1:63932062-63932081 | None:intergenic | 50.0% | |
| CTTGCCACAAGTGAGCAAAC+AGG | + | chr7_1:63933036-63933055 | None:intergenic | 50.0% | |
| CTGTTTGCTCACTTGTGGCA+AGG | - | chr7_1:63933034-63933053 | Msa1030080:intron | 50.0% | |
| CTCCGTCATAAGCAACTCAC+CGG | + | chr7_1:63933445-63933464 | None:intergenic | 50.0% | |
| !! | TGCTTATGACGGAGAGTACC+AGG | - | chr7_1:63933451-63933470 | Msa1030080:CDS | 50.0% |
| !! | GCTTATGACGGAGAGTACCA+GGG | - | chr7_1:63933452-63933471 | Msa1030080:CDS | 50.0% |
| CCTGAATTCCCTCCACCTAT+TGG | + | chr7_1:63934249-63934268 | None:intergenic | 50.0% | |
| CCAATAGGTGGAGGGAATTC+AGG | - | chr7_1:63934246-63934265 | Msa1030080:intron | 50.0% | |
| AGGTTCATGCAAACGAGGGA+GGG | - | chr7_1:63934266-63934285 | Msa1030080:intron | 50.0% | |
| ! | TACTGGTTGATCTTGCCTGC+TGG | - | chr7_1:63934313-63934332 | Msa1030080:intron | 50.0% |
| CACCACAAGTTGCACTGCTA+TGG | - | chr7_1:63934683-63934702 | Msa1030080:intron | 50.0% | |
| AGCCATAGCAGTGCAACTTG+TGG | + | chr7_1:63934688-63934707 | None:intergenic | 50.0% | |
| CTTACTGCAAGGATTGCTGC+TGG | - | chr7_1:63934941-63934960 | Msa1030080:intron | 50.0% | |
| ! | TGGTTGCTTTCTTGCTGCTC+TGG | - | chr7_1:63934961-63934980 | Msa1030080:intron | 50.0% |
| TCCAAAAAGTGGACACTGCG+GGG | - | chr7_1:63935113-63935132 | Msa1030080:intron | 50.0% | |
| GAAGAACACGTGAAGAGGAC+AGG | + | chr7_1:63935330-63935349 | None:intergenic | 50.0% | |
| CACATATACCAACCAGGGAC+AGG | + | chr7_1:63935365-63935384 | None:intergenic | 50.0% | |
| !!! | GCCCTTGTAATGGTTTTGGG+TGG | - | chr7_1:63935646-63935665 | Msa1030080:intron | 50.0% |
| CCCCACCCAAAACCATTACA+AGG | + | chr7_1:63935651-63935670 | None:intergenic | 50.0% | |
| CCGGTAACTGTTGGTCCAAA+AGG | + | chr7_1:63935725-63935744 | None:intergenic | 50.0% | |
| CGCATCTTTGTACCTTGGAC+TGG | - | chr7_1:63936249-63936268 | Msa1030080:intron | 50.0% | |
| ATTGGTCCAGAGACCAACTC+TGG | + | chr7_1:63937245-63937264 | None:intergenic | 50.0% | |
| ! | AGAGAGAGAGAGGTACGAGG+AGG | + | chr7_1:63932054-63932073 | None:intergenic | 55.0% |
| ! | GAGAGAGAGAGAGAGGTACG+AGG | + | chr7_1:63932057-63932076 | None:intergenic | 55.0% |
| GCGTGCAGTCAATGACTGCA+TGG | + | chr7_1:63932346-63932365 | None:intergenic | 55.0% | |
| ! | TGTGGTTTTCTGCTGCTGGC+CGG | - | chr7_1:63934112-63934131 | Msa1030080:CDS | 55.0% |
| CAGGTTCATGCAAACGAGGG+AGG | - | chr7_1:63934265-63934284 | Msa1030080:intron | 55.0% | |
| GGTTCATGCAAACGAGGGAG+GGG | - | chr7_1:63934267-63934286 | Msa1030080:intron | 55.0% | |
| AGACGCGTGGTGGCATATAC+TGG | - | chr7_1:63934296-63934315 | Msa1030080:intron | 55.0% | |
| !! | TCCCCGCAGTGTCCACTTTT+TGG | + | chr7_1:63935117-63935136 | None:intergenic | 55.0% |
| ACACTGCGGGGACTCTGTAT+CGG | - | chr7_1:63935125-63935144 | Msa1030080:intron | 55.0% | |
| GTCTGCCCTTGCCCTTGTAA+TGG | - | chr7_1:63935636-63935655 | Msa1030080:intron | 55.0% | |
| GGTGGGAAGAGAGGGATTAC+AGG | - | chr7_1:63935980-63935999 | Msa1030080:intron | 55.0% | |
| CTTGCCGGCAACAAACAGCT+TGG | + | chr7_1:63936813-63936832 | None:intergenic | 55.0% | |
| GTCCAGAGACCAACTCTGGT+GGG | + | chr7_1:63937241-63937260 | None:intergenic | 55.0% | |
| ! | GTGGTTTTCTGCTGCTGGCC+GGG | - | chr7_1:63934113-63934132 | Msa1030080:CDS | 60.0% |
| GGAACGACACCCACCAGAGT+TGG | - | chr7_1:63937229-63937248 | Msa1030080:five_prime_UTR | 60.0% | |
| ! | CACCCACCAGAGTTGGTCTC+TGG | - | chr7_1:63937236-63937255 | Msa1030080:five_prime_UTR | 60.0% |
| GGTCCAGAGACCAACTCTGG+TGG | + | chr7_1:63937242-63937261 | None:intergenic | 60.0% | |
| GGAGGGGTAACACAGACGCG+TGG | - | chr7_1:63934283-63934302 | Msa1030080:intron | 65.0% | |
| GGGGTAACACAGACGCGTGG+TGG | - | chr7_1:63934286-63934305 | Msa1030080:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 63931765 | 63937320 | 63931765 | ID=Msa1030080;Name=Msa1030080 |
| chr7_1 | mRNA | 63931765 | 63937320 | 63931765 | ID=Msa1030080-mRNA-1;Parent=Msa1030080;Name=Msa1030080-mRNA-1;_AED=0.24;_eAED=0.24;_QI=203|0.66|0.9|0.9|0.88|0.8|10|209|198 |
| chr7_1 | exon | 63931765 | 63931810 | 63931765 | ID=Msa1030080-mRNA-1:exon:13979;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63932128 | 63932291 | 63932128 | ID=Msa1030080-mRNA-1:exon:13978;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63933406 | 63933511 | 63933406 | ID=Msa1030080-mRNA-1:exon:13977;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63933610 | 63933639 | 63933610 | ID=Msa1030080-mRNA-1:exon:13976;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63933766 | 63933849 | 63933766 | ID=Msa1030080-mRNA-1:exon:13975;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63933939 | 63933963 | 63933939 | ID=Msa1030080-mRNA-1:exon:13974;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63934076 | 63934197 | 63934076 | ID=Msa1030080-mRNA-1:exon:13973;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63935521 | 63935563 | 63935521 | ID=Msa1030080-mRNA-1:exon:13972;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63936030 | 63936125 | 63936030 | ID=Msa1030080-mRNA-1:exon:13971;Parent=Msa1030080-mRNA-1 |
| chr7_1 | exon | 63937028 | 63937320 | 63937028 | ID=Msa1030080-mRNA-1:exon:13970;Parent=Msa1030080-mRNA-1 |
| chr7_1 | five_prime_UTR | 63937118 | 63937320 | 63937118 | ID=Msa1030080-mRNA-1:five_prime_utr;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63937028 | 63937117 | 63937028 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63936030 | 63936125 | 63936030 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63935521 | 63935563 | 63935521 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63934076 | 63934197 | 63934076 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63933939 | 63933963 | 63933939 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63933766 | 63933849 | 63933766 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63933610 | 63933639 | 63933610 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63933406 | 63933511 | 63933406 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | CDS | 63932291 | 63932291 | 63932291 | ID=Msa1030080-mRNA-1:cds;Parent=Msa1030080-mRNA-1 |
| chr7_1 | three_prime_UTR | 63932128 | 63932290 | 63932128 | ID=Msa1030080-mRNA-1:three_prime_utr;Parent=Msa1030080-mRNA-1 |
| chr7_1 | three_prime_UTR | 63931765 | 63931810 | 63931765 | ID=Msa1030080-mRNA-1:three_prime_utr;Parent=Msa1030080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
