Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333560 | XP_003618594.1 | 97.765 | 179 | 4 | 0 | 1 | 179 | 1 | 179 | 1.47e-128 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333560 | sp|Q39131|LAML_ARATH | 54.938 | 162 | 71 | 2 | 20 | 179 | 11 | 172 | 8.96e-62 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333560 | Q2HW94 | 97.765 | 179 | 4 | 0 | 1 | 179 | 1 | 179 | 7.03e-129 | 371 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa1333560 | 0.866592 | 2.546625e-65 | -8.615850e-47 |
| Msa0016670 | Msa1333560 | 0.825207 | 5.316916e-54 | -8.615850e-47 |
| Msa0032020 | Msa1333560 | 0.814894 | 1.221003e-51 | -8.615850e-47 |
| Msa0032920 | Msa1333560 | -0.830015 | 3.724433e-55 | -8.615850e-47 |
| Msa0036130 | Msa1333560 | 0.814765 | 1.303780e-51 | -8.615850e-47 |
| Msa0039250 | Msa1333560 | 0.802815 | 4.690543e-49 | -8.615850e-47 |
| Msa0043670 | Msa1333560 | -0.829410 | 5.227381e-55 | -8.615850e-47 |
| Msa0048180 | Msa1333560 | 0.834332 | 3.186465e-56 | -8.615850e-47 |
| Msa0052610 | Msa1333560 | 0.860769 | 1.639502e-63 | -8.615850e-47 |
| Msa0052870 | Msa1333560 | 0.806217 | 9.157406e-50 | -8.615850e-47 |
| Msa0057610 | Msa1333560 | 0.807791 | 4.254160e-50 | -8.615850e-47 |
| Msa0057710 | Msa1333560 | 0.834177 | 3.485118e-56 | -8.615850e-47 |
| Msa0067870 | Msa1333560 | 0.833793 | 4.347995e-56 | -8.615850e-47 |
| Msa0073670 | Msa1333560 | 0.823144 | 1.622395e-53 | -8.615850e-47 |
| Msa0081520 | Msa1333560 | 0.820270 | 7.497022e-53 | -8.615850e-47 |
| Msa0092670 | Msa1333560 | -0.855553 | 5.841577e-62 | -8.615850e-47 |
| Msa0092690 | Msa1333560 | -0.859623 | 3.639856e-63 | -8.615850e-47 |
| Msa0092740 | Msa1333560 | -0.864892 | 8.767017e-65 | -8.615850e-47 |
| Msa0093850 | Msa1333560 | 0.851115 | 1.095144e-60 | -8.615850e-47 |
| Msa0098470 | Msa1333560 | 0.828719 | 7.688984e-55 | -8.615850e-47 |
| Msa0106320 | Msa1333560 | 0.827777 | 1.297315e-54 | -8.615850e-47 |
| Msa0112790 | Msa1333560 | 0.800155 | 1.645866e-48 | -8.615850e-47 |
| Msa0115160 | Msa1333560 | 0.830777 | 2.425597e-55 | -8.615850e-47 |
| Msa0118710 | Msa1333560 | 0.801001 | 1.106272e-48 | -8.615850e-47 |
| Msa0616340 | Msa1333560 | 0.800570 | 1.354556e-48 | -8.615850e-47 |
| Msa0619860 | Msa1333560 | 0.815996 | 6.942095e-52 | -8.615850e-47 |
| Msa0620990 | Msa1333560 | 0.844996 | 5.349272e-59 | -8.615850e-47 |
| Msa0631250 | Msa1333560 | 0.844399 | 7.742752e-59 | -8.615850e-47 |
| Msa0633570 | Msa1333560 | 0.803237 | 3.836897e-49 | -8.615850e-47 |
| Msa0638480 | Msa1333560 | 0.827033 | 1.955585e-54 | -8.615850e-47 |
| Msa0644030 | Msa1333560 | 0.810175 | 1.313389e-50 | -8.615850e-47 |
| Msa0654870 | Msa1333560 | 0.821017 | 5.047714e-53 | -8.615850e-47 |
| Msa0658480 | Msa1333560 | 0.804097 | 2.543869e-49 | -8.615850e-47 |
| Msa0659030 | Msa1333560 | 0.831945 | 1.251774e-55 | -8.615850e-47 |
| Msa0666230 | Msa1333560 | 0.828487 | 8.747760e-55 | -8.615850e-47 |
| Msa0669180 | Msa1333560 | 0.837831 | 4.119874e-57 | -8.615850e-47 |
| Msa0683570 | Msa1333560 | 0.812813 | 3.509467e-51 | -8.615850e-47 |
| Msa0683780 | Msa1333560 | 0.808175 | 3.524187e-50 | -8.615850e-47 |
| Msa0687230 | Msa1333560 | 0.812745 | 3.632369e-51 | -8.615850e-47 |
| Msa0687630 | Msa1333560 | 0.815363 | 9.608756e-52 | -8.615850e-47 |
| Msa0687870 | Msa1333560 | 0.841875 | 3.644142e-58 | -8.615850e-47 |
| Msa0692880 | Msa1333560 | 0.811567 | 6.562904e-51 | -8.615850e-47 |
| Msa0702340 | Msa1333560 | 0.821490 | 3.928213e-53 | -8.615850e-47 |
| Msa0702590 | Msa1333560 | 0.824406 | 8.213596e-54 | -8.615850e-47 |
| Msa0702660 | Msa1333560 | 0.824093 | 9.726202e-54 | -8.615850e-47 |
| Msa0703230 | Msa1333560 | 0.804439 | 2.158724e-49 | -8.615850e-47 |
| Msa0705000 | Msa1333560 | 0.840071 | 1.084164e-57 | -8.615850e-47 |
| Msa0705040 | Msa1333560 | 0.842102 | 3.174367e-58 | -8.615850e-47 |
| Msa0706760 | Msa1333560 | 0.823868 | 1.098509e-53 | -8.615850e-47 |
| Msa0707710 | Msa1333560 | 0.820695 | 5.988301e-53 | -8.615850e-47 |
| Msa0709780 | Msa1333560 | 0.861964 | 7.082461e-64 | -8.615850e-47 |
| Msa0724910 | Msa1333560 | 0.819639 | 1.045210e-52 | -8.615850e-47 |
| Msa0726090 | Msa1333560 | 0.824211 | 9.127048e-54 | -8.615850e-47 |
| Msa0734960 | Msa1333560 | 0.822013 | 2.972592e-53 | -8.615850e-47 |
| Msa0738100 | Msa1333560 | 0.808803 | 2.587638e-50 | -8.615850e-47 |
| Msa0739080 | Msa1333560 | 0.810199 | 1.297877e-50 | -8.615850e-47 |
| Msa0744100 | Msa1333560 | 0.832271 | 1.039595e-55 | -8.615850e-47 |
| Msa0749230 | Msa1333560 | 0.805286 | 1.436631e-49 | -8.615850e-47 |
| Msa0750920 | Msa1333560 | 0.839844 | 1.242215e-57 | -8.615850e-47 |
| Msa0772230 | Msa1333560 | 0.810999 | 8.717070e-51 | -8.615850e-47 |
| Msa0785130 | Msa1333560 | 0.841891 | 3.608025e-58 | -8.615850e-47 |
| Msa0788120 | Msa1333560 | 0.807022 | 6.191157e-50 | -8.615850e-47 |
| Msa0788770 | Msa1333560 | 0.833997 | 3.866827e-56 | -8.615850e-47 |
| Msa0789650 | Msa1333560 | 0.806368 | 8.512032e-50 | -8.615850e-47 |
| Msa0790400 | Msa1333560 | 0.843486 | 1.360308e-58 | -8.615850e-47 |
| Msa0799000 | Msa1333560 | 0.809608 | 1.739328e-50 | -8.615850e-47 |
| Msa0804250 | Msa1333560 | 0.834910 | 2.280106e-56 | -8.615850e-47 |
| Msa0817540 | Msa1333560 | 0.815858 | 7.454365e-52 | -8.615850e-47 |
| Msa0819540 | Msa1333560 | 0.817912 | 2.577836e-52 | -8.615850e-47 |
| Msa0824640 | Msa1333560 | 0.819198 | 1.316893e-52 | -8.615850e-47 |
| Msa0825270 | Msa1333560 | 0.835208 | 1.918670e-56 | -8.615850e-47 |
| Msa0825280 | Msa1333560 | 0.800843 | 1.191316e-48 | -8.615850e-47 |
| Msa0826510 | Msa1333560 | 0.823834 | 1.118950e-53 | -8.615850e-47 |
| Msa0125770 | Msa1333560 | 0.810748 | 9.877397e-51 | -8.615850e-47 |
| Msa0130110 | Msa1333560 | 0.801388 | 9.220235e-49 | -8.615850e-47 |
| Msa0130240 | Msa1333560 | 0.833422 | 5.383437e-56 | -8.615850e-47 |
| Msa0134180 | Msa1333560 | 0.836142 | 1.113020e-56 | -8.615850e-47 |
| Msa0137610 | Msa1333560 | -0.868127 | 8.226006e-66 | -8.615850e-47 |
| Msa0138360 | Msa1333560 | 0.817519 | 3.161701e-52 | -8.615850e-47 |
| Msa0138920 | Msa1333560 | 0.820084 | 8.268557e-53 | -8.615850e-47 |
| Msa0147980 | Msa1333560 | 0.819484 | 1.133547e-52 | -8.615850e-47 |
| Msa0152870 | Msa1333560 | 0.828701 | 7.765242e-55 | -8.615850e-47 |
| Msa0167480 | Msa1333560 | 0.838809 | 2.306373e-57 | -8.615850e-47 |
| Msa0169610 | Msa1333560 | 0.811951 | 5.413665e-51 | -8.615850e-47 |
| Msa0170410 | Msa1333560 | 0.801532 | 8.615109e-49 | -8.615850e-47 |
| Msa0171850 | Msa1333560 | 0.818636 | 1.767205e-52 | -8.615850e-47 |
| Msa0173890 | Msa1333560 | 0.852539 | 4.320904e-61 | -8.615850e-47 |
| Msa0178120 | Msa1333560 | 0.837454 | 5.150395e-57 | -8.615850e-47 |
| Msa0180020 | Msa1333560 | 0.806100 | 9.689068e-50 | -8.615850e-47 |
| Msa0180930 | Msa1333560 | 0.810029 | 1.411843e-50 | -8.615850e-47 |
| Msa0181610 | Msa1333560 | 0.811524 | 6.705878e-51 | -8.615850e-47 |
| Msa0185400 | Msa1333560 | 0.804878 | 1.748772e-49 | -8.615850e-47 |
| Msa0186890 | Msa1333560 | 0.807623 | 4.617902e-50 | -8.615850e-47 |
| Msa0188690 | Msa1333560 | 0.837190 | 6.015062e-57 | -8.615850e-47 |
| Msa0194540 | Msa1333560 | 0.800586 | 1.344306e-48 | -8.615850e-47 |
| Msa0196190 | Msa1333560 | 0.850596 | 1.532983e-60 | -8.615850e-47 |
| Msa0197520 | Msa1333560 | 0.813323 | 2.713245e-51 | -8.615850e-47 |
| Msa0197780 | Msa1333560 | 0.803408 | 3.536868e-49 | -8.615850e-47 |
| Msa0209510 | Msa1333560 | 0.802529 | 5.373745e-49 | -8.615850e-47 |
| Msa0221480 | Msa1333560 | 0.831537 | 1.578291e-55 | -8.615850e-47 |
| Msa0223170 | Msa1333560 | 0.807023 | 6.187358e-50 | -8.615850e-47 |
| Msa0226460 | Msa1333560 | 0.810468 | 1.135327e-50 | -8.615850e-47 |
| Msa0230150 | Msa1333560 | 0.806378 | 8.468544e-50 | -8.615850e-47 |
| Msa0231100 | Msa1333560 | 0.802636 | 5.106753e-49 | -8.615850e-47 |
| Msa1224840 | Msa1333560 | 0.829167 | 5.988137e-55 | -8.615850e-47 |
| Msa1225660 | Msa1333560 | 0.813099 | 3.038265e-51 | -8.615850e-47 |
| Msa1227690 | Msa1333560 | 0.849196 | 3.775722e-60 | -8.615850e-47 |
| Msa1235250 | Msa1333560 | 0.832693 | 8.171000e-56 | -8.615850e-47 |
| Msa1252190 | Msa1333560 | 0.841377 | 4.930560e-58 | -8.615850e-47 |
| Msa1253550 | Msa1333560 | 0.827031 | 1.957824e-54 | -8.615850e-47 |
| Msa1254710 | Msa1333560 | 0.807993 | 3.853668e-50 | -8.615850e-47 |
| Msa1255410 | Msa1333560 | 0.805071 | 1.593523e-49 | -8.615850e-47 |
| Msa1258710 | Msa1333560 | 0.861674 | 8.687564e-64 | -8.615850e-47 |
| Msa1266060 | Msa1333560 | 0.840651 | 7.649559e-58 | -8.615850e-47 |
| Msa1271580 | Msa1333560 | 0.807191 | 5.702133e-50 | -8.615850e-47 |
| Msa1274060 | Msa1333560 | 0.801764 | 7.718194e-49 | -8.615850e-47 |
| Msa1274280 | Msa1333560 | 0.837197 | 5.992790e-57 | -8.615850e-47 |
| Msa1276660 | Msa1333560 | 0.812794 | 3.543518e-51 | -8.615850e-47 |
| Msa1278740 | Msa1333560 | 0.830072 | 3.608495e-55 | -8.615850e-47 |
| Msa1292830 | Msa1333560 | 0.840662 | 7.596267e-58 | -8.615850e-47 |
| Msa1294840 | Msa1333560 | 0.816470 | 5.439756e-52 | -8.615850e-47 |
| Msa1307950 | Msa1333560 | 0.813564 | 2.401705e-51 | -8.615850e-47 |
| Msa1310690 | Msa1333560 | 0.800093 | 1.694314e-48 | -8.615850e-47 |
| Msa1313300 | Msa1333560 | 0.803894 | 2.803412e-49 | -8.615850e-47 |
| Msa1317950 | Msa1333560 | 0.814758 | 1.308629e-51 | -8.615850e-47 |
| Msa1317960 | Msa1333560 | 0.822954 | 1.796610e-53 | -8.615850e-47 |
| Msa1323050 | Msa1333560 | 0.814291 | 1.660564e-51 | -8.615850e-47 |
| Msa1333560 | Msa1352350 | 0.812877 | 3.398022e-51 | -8.615850e-47 |
| Msa1333560 | Msa1356610 | 0.818194 | 2.225696e-52 | -8.615850e-47 |
| Msa1333560 | Msa1356830 | 0.801715 | 7.899493e-49 | -8.615850e-47 |
| Msa1333560 | Msa1363330 | 0.828815 | 7.290095e-55 | -8.615850e-47 |
| Msa1333560 | Msa1363860 | 0.803509 | 3.369870e-49 | -8.615850e-47 |
| Msa1333560 | Msa1365150 | 0.809048 | 2.293720e-50 | -8.615850e-47 |
| Msa1333560 | Msa1369150 | 0.845327 | 4.353336e-59 | -8.615850e-47 |
| Msa1333560 | Msa1371520 | 0.805047 | 1.611810e-49 | -8.615850e-47 |
| Msa1333560 | Msa1373820 | 0.838034 | 3.653826e-57 | -8.615850e-47 |
| Msa1333560 | Msa1376650 | 0.802320 | 5.933477e-49 | -8.615850e-47 |
| Msa1333560 | Msa1380970 | 0.812070 | 5.101167e-51 | -8.615850e-47 |
| Msa1333560 | Msa1386600 | 0.828631 | 8.076205e-55 | -8.615850e-47 |
| Msa1333560 | Msa1401390 | 0.823266 | 1.519450e-53 | -8.615850e-47 |
| Msa1333560 | Msa1403570 | 0.824960 | 6.080387e-54 | -8.615850e-47 |
| Msa1333560 | Msa1409260 | 0.803124 | 4.049862e-49 | -8.615850e-47 |
| Msa1333560 | Msa1410440 | 0.844063 | 9.532589e-59 | -8.615850e-47 |
| Msa1333560 | Msa1411500 | 0.845054 | 5.156836e-59 | -8.615850e-47 |
| Msa1333560 | Msa1411950 | 0.802863 | 4.585013e-49 | -8.615850e-47 |
| Msa1333560 | Msa1413180 | 0.820312 | 7.331579e-53 | -8.615850e-47 |
| Msa1333560 | Msa1418500 | 0.800952 | 1.132141e-48 | -8.615850e-47 |
| Msa1333560 | Msa1427160 | 0.801743 | 7.796702e-49 | -8.615850e-47 |
| Msa1333560 | Msa1429500 | 0.821438 | 4.037573e-53 | -8.615850e-47 |
| Msa1333560 | Msa1432480 | 0.823209 | 1.566592e-53 | -8.615850e-47 |
| Msa1333560 | Msa1432920 | 0.804280 | 2.330797e-49 | -8.615850e-47 |
| Msa1333560 | Msa1437940 | 0.818243 | 2.170093e-52 | -8.615850e-47 |
| Msa1333560 | Msa1438640 | 0.801612 | 8.293619e-49 | -8.615850e-47 |
| Msa1333560 | Msa1440260 | -0.837234 | 5.860862e-57 | -8.615850e-47 |
| Msa1333560 | Msa1442850 | 0.821348 | 4.236365e-53 | -8.615850e-47 |
| Msa1333560 | Msa1443300 | 0.842288 | 2.833373e-58 | -8.615850e-47 |
| Msa1333560 | Msa1443930 | 0.832761 | 7.859389e-56 | -8.615850e-47 |
| Msa1333560 | Msa1446810 | 0.810517 | 1.108123e-50 | -8.615850e-47 |
| Msa1333560 | Msa1449930 | 0.862175 | 6.104112e-64 | -8.615850e-47 |
| Msa1333560 | Msa1457400 | 0.815007 | 1.152334e-51 | -8.615850e-47 |
| Msa1333560 | Msa1459460 | 0.826416 | 2.745355e-54 | -8.615850e-47 |
| Msa1333560 | Msa1459910 | 0.821464 | 3.981188e-53 | -8.615850e-47 |
| Msa1333560 | Msa1459960 | 0.800036 | 1.739850e-48 | -8.615850e-47 |
| Msa0370160 | Msa1333560 | -0.813076 | 3.073259e-51 | -8.615850e-47 |
| Msa0384670 | Msa1333560 | 0.811320 | 7.425422e-51 | -8.615850e-47 |
| Msa0385090 | Msa1333560 | 0.821516 | 3.873338e-53 | -8.615850e-47 |
| Msa0388990 | Msa1333560 | 0.814624 | 1.401141e-51 | -8.615850e-47 |
| Msa0405650 | Msa1333560 | 0.806241 | 9.053045e-50 | -8.615850e-47 |
| Msa0405710 | Msa1333560 | 0.800696 | 1.276754e-48 | -8.615850e-47 |
| Msa0423750 | Msa1333560 | 0.806987 | 6.298459e-50 | -8.615850e-47 |
| Msa0434570 | Msa1333560 | 0.819613 | 1.059554e-52 | -8.615850e-47 |
| Msa0434770 | Msa1333560 | 0.829471 | 5.053522e-55 | -8.615850e-47 |
| Msa0434920 | Msa1333560 | 0.835617 | 1.511938e-56 | -8.615850e-47 |
| Msa0435370 | Msa1333560 | 0.880228 | 6.521811e-70 | -8.615850e-47 |
| Msa0435420 | Msa1333560 | 0.883106 | 5.941734e-71 | -8.615850e-47 |
| Msa0435570 | Msa1333560 | 0.852785 | 3.675145e-61 | -8.615850e-47 |
| Msa0436200 | Msa1333560 | 0.801701 | 7.951359e-49 | -8.615850e-47 |
| Msa0437690 | Msa1333560 | -0.818697 | 1.712245e-52 | -8.615850e-47 |
| Msa0443390 | Msa1333560 | 0.842061 | 3.253267e-58 | -8.615850e-47 |
| Msa0447370 | Msa1333560 | 0.802211 | 6.247673e-49 | -8.615850e-47 |
| Msa0478580 | Msa1333560 | 0.833647 | 4.729233e-56 | -8.615850e-47 |
| Msa0478870 | Msa1333560 | 0.800803 | 1.214106e-48 | -8.615850e-47 |
| Msa0980940 | Msa1333560 | 0.813764 | 2.169875e-51 | -8.615850e-47 |
| Msa1005820 | Msa1333560 | 0.808824 | 2.561382e-50 | -8.615850e-47 |
| Msa1019240 | Msa1333560 | 0.839266 | 1.755864e-57 | -8.615850e-47 |
| Msa1019260 | Msa1333560 | 0.836273 | 1.030562e-56 | -8.615850e-47 |
| Msa1030930 | Msa1333560 | 0.807795 | 4.244026e-50 | -8.615850e-47 |
| Msa1049510 | Msa1333560 | -0.808791 | 2.603736e-50 | -8.615850e-47 |
| Msa1070090 | Msa1333560 | 0.808691 | 2.734375e-50 | -8.615850e-47 |
| Msa1076560 | Msa1333560 | 0.824869 | 6.387545e-54 | -8.615850e-47 |
| Msa1079230 | Msa1333560 | 0.828000 | 1.146362e-54 | -8.615850e-47 |
| Msa1091520 | Msa1333560 | 0.800686 | 1.282928e-48 | -8.615850e-47 |
| Msa1104140 | Msa1333560 | 0.810415 | 1.166176e-50 | -8.615850e-47 |
| Msa1104210 | Msa1333560 | 0.834118 | 3.605802e-56 | -8.615850e-47 |
| Msa0241830 | Msa1333560 | 0.831109 | 2.011542e-55 | -8.615850e-47 |
| Msa0249540 | Msa1333560 | 0.830571 | 2.725112e-55 | -8.615850e-47 |
| Msa0262480 | Msa1333560 | 0.840876 | 6.676293e-58 | -8.615850e-47 |
| Msa0263080 | Msa1333560 | 0.806416 | 8.314621e-50 | -8.615850e-47 |
| Msa0270210 | Msa1333560 | 0.829120 | 6.150336e-55 | -8.615850e-47 |
| Msa0286060 | Msa1333560 | 0.812906 | 3.349715e-51 | -8.615850e-47 |
| Msa0291520 | Msa1333560 | 0.802544 | 5.334691e-49 | -8.615850e-47 |
| Msa0294160 | Msa1333560 | 0.812407 | 4.306274e-51 | -8.615850e-47 |
| Msa0296250 | Msa1333560 | 0.825858 | 3.726626e-54 | -8.615850e-47 |
| Msa0300350 | Msa1333560 | 0.846766 | 1.766787e-59 | -8.615850e-47 |
| Msa0302380 | Msa1333560 | 0.812926 | 3.315260e-51 | -8.615850e-47 |
| Msa0307570 | Msa1333560 | 0.808461 | 3.062611e-50 | -8.615850e-47 |
| Msa0307850 | Msa1333560 | 0.846789 | 1.741745e-59 | -8.615850e-47 |
| Msa0322900 | Msa1333560 | 0.826622 | 2.452710e-54 | -8.615850e-47 |
| Msa0335800 | Msa1333560 | 0.806546 | 7.805377e-50 | -8.615850e-47 |
| Msa0341690 | Msa1333560 | 0.835764 | 1.387447e-56 | -8.615850e-47 |
| Msa0359040 | Msa1333560 | 0.805899 | 1.068440e-49 | -8.615850e-47 |
| Msa1119070 | Msa1333560 | 0.811856 | 5.677958e-51 | -8.615850e-47 |
| Msa1123350 | Msa1333560 | 0.806276 | 8.896565e-50 | -8.615850e-47 |
| Msa1124110 | Msa1333560 | 0.819502 | 1.123299e-52 | -8.615850e-47 |
| Msa1126510 | Msa1333560 | 0.821131 | 4.753307e-53 | -8.615850e-47 |
| Msa1126770 | Msa1333560 | 0.802180 | 6.341134e-49 | -8.615850e-47 |
| Msa1127540 | Msa1333560 | 0.811215 | 7.825505e-51 | -8.615850e-47 |
| Msa1127590 | Msa1333560 | 0.853724 | 1.978193e-61 | -8.615850e-47 |
| Msa1131560 | Msa1333560 | 0.829582 | 4.749496e-55 | -8.615850e-47 |
| Msa1143650 | Msa1333560 | 0.841556 | 4.422645e-58 | -8.615850e-47 |
| Msa1145240 | Msa1333560 | 0.836748 | 7.801220e-57 | -8.615850e-47 |
| Msa1157870 | Msa1333560 | 0.812119 | 4.976888e-51 | -8.615850e-47 |
| Msa1166860 | Msa1333560 | 0.807956 | 3.923890e-50 | -8.615850e-47 |
| Msa1166870 | Msa1333560 | 0.840448 | 8.645067e-58 | -8.615850e-47 |
| Msa1168950 | Msa1333560 | 0.816698 | 4.837137e-52 | -8.615850e-47 |
| Msa1169040 | Msa1333560 | 0.829813 | 4.172316e-55 | -8.615850e-47 |
| Msa1174100 | Msa1333560 | 0.811568 | 6.561673e-51 | -8.615850e-47 |
| Msa1174530 | Msa1333560 | 0.834835 | 2.382251e-56 | -8.615850e-47 |
| Msa1184370 | Msa1333560 | 0.824938 | 6.154911e-54 | -8.615850e-47 |
| Msa1186530 | Msa1333560 | 0.819799 | 9.608385e-53 | -8.615850e-47 |
| Msa1188560 | Msa1333560 | 0.805380 | 1.373043e-49 | -8.615850e-47 |
| Msa1198530 | Msa1333560 | 0.818953 | 1.497288e-52 | -8.615850e-47 |
| Msa1201830 | Msa1333560 | 0.820784 | 5.713578e-53 | -8.615850e-47 |
| Msa1219000 | Msa1333560 | 0.812362 | 4.404457e-51 | -8.615850e-47 |
| Msa1223330 | Msa1333560 | 0.801582 | 8.413706e-49 | -8.615850e-47 |
| Msa0484290 | Msa1333560 | 0.817342 | 3.466735e-52 | -8.615850e-47 |
| Msa0498560 | Msa1333560 | 0.811542 | 6.647423e-51 | -8.615850e-47 |
| Msa0509950 | Msa1333560 | -0.818015 | 2.442962e-52 | -8.615850e-47 |
| Msa0511770 | Msa1333560 | 0.801249 | 9.843794e-49 | -8.615850e-47 |
| Msa0518030 | Msa1333560 | 0.851043 | 1.147427e-60 | -8.615850e-47 |
| Msa0526540 | Msa1333560 | 0.833931 | 4.014982e-56 | -8.615850e-47 |
| Msa0527020 | Msa1333560 | 0.849908 | 2.390370e-60 | -8.615850e-47 |
| Msa0527150 | Msa1333560 | 0.817103 | 3.922532e-52 | -8.615850e-47 |
| Msa0534750 | Msa1333560 | 0.814124 | 1.807186e-51 | -8.615850e-47 |
| Msa0541860 | Msa1333560 | 0.807522 | 4.850510e-50 | -8.615850e-47 |
| Msa0547990 | Msa1333560 | 0.815167 | 1.061846e-51 | -8.615850e-47 |
| Msa0552810 | Msa1333560 | 0.801967 | 7.011509e-49 | -8.615850e-47 |
| Msa0556010 | Msa1333560 | 0.838468 | 2.825594e-57 | -8.615850e-47 |
| Msa0561120 | Msa1333560 | 0.807801 | 4.233229e-50 | -8.615850e-47 |
| Msa0561430 | Msa1333560 | 0.827437 | 1.565267e-54 | -8.615850e-47 |
| Msa0576940 | Msa1333560 | 0.834080 | 3.685268e-56 | -8.615850e-47 |
| Msa0581070 | Msa1333560 | 0.811440 | 6.995529e-51 | -8.615850e-47 |
| Msa0581690 | Msa1333560 | 0.834466 | 2.949792e-56 | -8.615850e-47 |
| Msa0583500 | Msa1333560 | 0.825277 | 5.115926e-54 | -8.615850e-47 |
| Msa0593700 | Msa1333560 | 0.816448 | 5.500429e-52 | -8.615850e-47 |
| Msa0846240 | Msa1333560 | 0.823497 | 1.341546e-53 | -8.615850e-47 |
| Msa0856050 | Msa1333560 | 0.812334 | 4.467891e-51 | -8.615850e-47 |
| Msa0861510 | Msa1333560 | 0.825328 | 4.977422e-54 | -8.615850e-47 |
| Msa0861530 | Msa1333560 | 0.816073 | 6.674457e-52 | -8.615850e-47 |
| Msa0861600 | Msa1333560 | 0.811749 | 5.993045e-51 | -8.615850e-47 |
| Msa0864010 | Msa1333560 | 0.823675 | 1.218855e-53 | -8.615850e-47 |
| Msa0864420 | Msa1333560 | 0.820935 | 5.271978e-53 | -8.615850e-47 |
| Msa0865620 | Msa1333560 | 0.819941 | 8.912535e-53 | -8.615850e-47 |
| Msa0867060 | Msa1333560 | 0.841990 | 3.398639e-58 | -8.615850e-47 |
| Msa0872670 | Msa1333560 | 0.938585 | 5.272630e-99 | -8.615850e-47 |
| Msa0888940 | Msa1333560 | 0.833184 | 6.168031e-56 | -8.615850e-47 |
| Msa0930780 | Msa1333560 | 0.813241 | 2.827403e-51 | -8.615850e-47 |
| Msa0943170 | Msa1333560 | 0.840158 | 1.028998e-57 | -8.615850e-47 |
| Msa0963020 | Msa1333560 | 0.831416 | 1.690038e-55 | -8.615850e-47 |
| Msa0966270 | Msa1333560 | 0.808990 | 2.360578e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333560 | MtrunA17_Chr6g0453921 | 97.765 | 179 | 4 | 0 | 1 | 179 | 1 | 179 | 1.35e-132 | 371 |
| Msa1333560 | MtrunA17_Chr6g0453801 | 69.930 | 143 | 40 | 1 | 1 | 143 | 1 | 140 | 2.88e-71 | 215 |
| Msa1333560 | MtrunA17_Chr6g0453911 | 98.438 | 64 | 1 | 0 | 180 | 243 | 1 | 64 | 2.69e-39 | 130 |
| Msa1333560 | MtrunA17_Chr3g0144921 | 45.522 | 134 | 68 | 3 | 41 | 172 | 34 | 164 | 4.19e-34 | 120 |
| Msa1333560 | MtrunA17_Chr5g0440804 | 49.580 | 119 | 58 | 2 | 35 | 151 | 26 | 144 | 9.21e-33 | 117 |
| Msa1333560 | MtrunA17_Chr6g0453791 | 43.030 | 165 | 85 | 4 | 17 | 178 | 9 | 167 | 1.11e-32 | 117 |
| Msa1333560 | MtrunA17_Chr5g0440711 | 44.961 | 129 | 65 | 2 | 26 | 148 | 13 | 141 | 2.75e-31 | 112 |
| Msa1333560 | MtrunA17_Chr6g0453811 | 83.077 | 65 | 10 | 1 | 180 | 243 | 1 | 65 | 3.05e-31 | 110 |
| Msa1333560 | MtrunA17_Chr4g0041861 | 76.923 | 65 | 14 | 1 | 180 | 243 | 1 | 65 | 2.21e-27 | 100 |
| Msa1333560 | MtrunA17_Chr4g0001571 | 39.416 | 137 | 74 | 2 | 33 | 162 | 24 | 158 | 7.26e-25 | 96.7 |
| Msa1333560 | MtrunA17_Chr5g0440791 | 48.810 | 84 | 42 | 1 | 69 | 151 | 16 | 99 | 6.95e-20 | 82.4 |
| Msa1333560 | MtrunA17_Chr2g0323021 | 35.570 | 149 | 86 | 7 | 18 | 163 | 6 | 147 | 3.72e-19 | 83.2 |
| Msa1333560 | MtrunA17_Chr1g0196801 | 38.636 | 132 | 69 | 4 | 33 | 155 | 18 | 146 | 7.04e-19 | 81.3 |
| Msa1333560 | MtrunA17_Chr3g0132701 | 37.500 | 120 | 70 | 4 | 20 | 136 | 7 | 124 | 9.41e-18 | 79.0 |
| Msa1333560 | MtrunA17_Chr3g0132511 | 36.667 | 120 | 71 | 4 | 20 | 136 | 7 | 124 | 3.33e-17 | 77.8 |
| Msa1333560 | MtrunA17_Chr8g0335571 | 41.228 | 114 | 61 | 4 | 24 | 134 | 10 | 120 | 6.52e-17 | 76.3 |
| Msa1333560 | MtrunA17_Chr3g0132431 | 34.091 | 132 | 82 | 4 | 20 | 149 | 7 | 135 | 1.79e-15 | 72.4 |
| Msa1333560 | MtrunA17_Chr8g0381481 | 61.538 | 65 | 12 | 2 | 180 | 243 | 1 | 53 | 2.22e-15 | 68.2 |
| Msa1333560 | MtrunA17_Chr2g0324711 | 36.134 | 119 | 71 | 3 | 19 | 134 | 6 | 122 | 4.18e-15 | 73.6 |
| Msa1333560 | MtrunA17_Chr2g0331181 | 39.496 | 119 | 60 | 5 | 34 | 145 | 23 | 136 | 5.91e-15 | 70.9 |
| Msa1333560 | MtrunA17_Chr4g0039721 | 29.801 | 151 | 93 | 5 | 8 | 151 | 4 | 148 | 5.99e-15 | 70.9 |
| Msa1333560 | MtrunA17_Chr3g0132441 | 36.441 | 118 | 70 | 4 | 20 | 135 | 7 | 121 | 6.86e-15 | 70.9 |
| Msa1333560 | MtrunA17_Chr7g0253681 | 32.000 | 125 | 80 | 4 | 13 | 134 | 1 | 123 | 1.43e-14 | 69.3 |
| Msa1333560 | MtrunA17_Chr4g0064041 | 41.176 | 102 | 53 | 3 | 38 | 134 | 191 | 290 | 1.64e-14 | 72.0 |
| Msa1333560 | MtrunA17_Chr4g0064041 | 34.532 | 139 | 84 | 3 | 17 | 150 | 8 | 144 | 2.29e-14 | 71.6 |
| Msa1333560 | MtrunA17_Chr5g0394321 | 30.282 | 142 | 89 | 5 | 16 | 154 | 7 | 141 | 1.84e-14 | 69.3 |
| Msa1333560 | MtrunA17_Chr2g0289741 | 30.769 | 130 | 86 | 3 | 18 | 145 | 7 | 134 | 2.08e-14 | 68.9 |
| Msa1333560 | MtrunA17_Chr7g0253701 | 32.258 | 124 | 80 | 3 | 13 | 134 | 1 | 122 | 2.29e-14 | 68.6 |
| Msa1333560 | MtrunA17_Chr7g0253671 | 32.258 | 124 | 80 | 3 | 13 | 134 | 1 | 122 | 2.29e-14 | 68.6 |
| Msa1333560 | MtrunA17_Chr8g0335531 | 38.261 | 115 | 63 | 5 | 24 | 134 | 10 | 120 | 5.20e-14 | 68.2 |
| Msa1333560 | MtrunA17_Chr1g0211101 | 31.452 | 124 | 83 | 2 | 16 | 138 | 11 | 133 | 7.34e-14 | 67.8 |
| Msa1333560 | MtrunA17_Chr8g0360371 | 36.957 | 138 | 77 | 6 | 17 | 148 | 1 | 134 | 8.71e-14 | 69.3 |
| Msa1333560 | MtrunA17_Chr1g0177341 | 31.624 | 117 | 76 | 3 | 20 | 134 | 7 | 121 | 2.02e-13 | 65.9 |
| Msa1333560 | MtrunA17_Chr1g0177331 | 31.624 | 117 | 76 | 3 | 20 | 134 | 7 | 121 | 2.02e-13 | 65.9 |
| Msa1333560 | MtrunA17_Chr1g0205701 | 32.143 | 112 | 71 | 3 | 26 | 134 | 13 | 122 | 3.27e-13 | 66.2 |
| Msa1333560 | MtrunA17_Chr4g0041811 | 33.333 | 123 | 75 | 3 | 17 | 134 | 11 | 131 | 6.46e-13 | 65.9 |
| Msa1333560 | MtrunA17_Chr4g0040291 | 32.026 | 153 | 85 | 5 | 20 | 155 | 7 | 157 | 1.72e-12 | 64.3 |
| Msa1333560 | MtrunA17_Chr6g0459441 | 35.238 | 105 | 65 | 2 | 33 | 136 | 21 | 123 | 2.68e-12 | 63.5 |
| Msa1333560 | MtrunA17_Chr8g0385021 | 36.585 | 123 | 66 | 4 | 19 | 134 | 5 | 122 | 3.42e-12 | 64.7 |
| Msa1333560 | MtrunA17_Chr3g0136871 | 31.544 | 149 | 86 | 5 | 35 | 169 | 24 | 170 | 3.61e-12 | 63.2 |
| Msa1333560 | MtrunA17_Chr8g0385031 | 34.167 | 120 | 73 | 3 | 19 | 134 | 5 | 122 | 4.67e-12 | 64.3 |
| Msa1333560 | MtrunA17_Chr7g0253731 | 30.000 | 100 | 68 | 1 | 21 | 120 | 8 | 105 | 5.57e-12 | 62.0 |
| Msa1333560 | MtrunA17_Chr3g0125791 | 35.000 | 100 | 61 | 2 | 33 | 132 | 28 | 123 | 5.96e-12 | 61.2 |
| Msa1333560 | MtrunA17_Chr7g0253761 | 32.203 | 118 | 77 | 2 | 19 | 135 | 7 | 122 | 7.03e-12 | 62.4 |
| Msa1333560 | MtrunA17_Chr4g0062341 | 30.769 | 143 | 86 | 6 | 14 | 148 | 9 | 146 | 7.73e-12 | 62.4 |
| Msa1333560 | MtrunA17_Chr4g0062311 | 30.769 | 143 | 86 | 6 | 14 | 148 | 9 | 146 | 7.73e-12 | 62.4 |
| Msa1333560 | MtrunA17_Chr6g0458331 | 36.036 | 111 | 61 | 4 | 30 | 134 | 29 | 135 | 8.67e-12 | 61.6 |
| Msa1333560 | MtrunA17_Chr8g0380901 | 34.188 | 117 | 72 | 3 | 16 | 132 | 7 | 118 | 8.87e-12 | 60.5 |
| Msa1333560 | MtrunA17_Chr1g0150131 | 31.343 | 134 | 77 | 5 | 10 | 137 | 4 | 128 | 1.31e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333560 | AT5G15350.1 | 54.938 | 162 | 71 | 2 | 20 | 179 | 11 | 172 | 9.11e-63 | 194 |
| Msa1333560 | AT4G12880.1 | 56.034 | 116 | 51 | 0 | 20 | 135 | 11 | 126 | 2.06e-44 | 146 |
| Msa1333560 | AT3G01070.1 | 56.329 | 158 | 61 | 5 | 18 | 167 | 4 | 161 | 2.10e-38 | 132 |
| Msa1333560 | AT5G03850.1 | 81.250 | 64 | 12 | 0 | 180 | 243 | 1 | 64 | 3.13e-31 | 110 |
| Msa1333560 | AT3G10090.1 | 81.250 | 64 | 12 | 0 | 180 | 243 | 1 | 64 | 3.13e-31 | 110 |
| Msa1333560 | AT2G27035.1 | 42.063 | 126 | 70 | 2 | 26 | 151 | 17 | 139 | 1.47e-30 | 111 |
| Msa1333560 | AT5G64140.1 | 81.250 | 64 | 12 | 0 | 180 | 243 | 1 | 64 | 4.93e-30 | 107 |
| Msa1333560 | AT4G12880.2 | 59.420 | 69 | 28 | 0 | 67 | 135 | 20 | 88 | 9.22e-23 | 89.7 |
| Msa1333560 | AT3G20570.1 | 40.164 | 122 | 64 | 4 | 20 | 134 | 9 | 128 | 1.93e-17 | 78.2 |
| Msa1333560 | AT2G25060.1 | 35.043 | 117 | 68 | 4 | 24 | 134 | 17 | 131 | 1.73e-16 | 75.1 |
| Msa1333560 | AT5G26330.1 | 35.398 | 113 | 68 | 3 | 25 | 134 | 11 | 121 | 1.41e-15 | 72.8 |
| Msa1333560 | AT2G32300.1 | 38.614 | 101 | 59 | 2 | 35 | 134 | 23 | 121 | 4.66e-15 | 72.8 |
| Msa1333560 | AT4G32490.1 | 34.711 | 121 | 72 | 4 | 17 | 134 | 12 | 128 | 5.41e-15 | 72.0 |
| Msa1333560 | AT2G32300.2 | 38.614 | 101 | 59 | 2 | 35 | 134 | 53 | 151 | 9.54e-15 | 72.4 |
| Msa1333560 | AT3G17675.1 | 33.333 | 123 | 75 | 3 | 15 | 134 | 9 | 127 | 1.25e-14 | 68.9 |
| Msa1333560 | AT5G07475.1 | 32.308 | 130 | 82 | 4 | 27 | 153 | 19 | 145 | 5.18e-14 | 68.9 |
| Msa1333560 | AT5G53870.2 | 33.548 | 155 | 93 | 5 | 19 | 167 | 13 | 163 | 6.76e-14 | 70.5 |
| Msa1333560 | AT5G53870.1 | 33.548 | 155 | 93 | 5 | 19 | 167 | 13 | 163 | 1.07e-13 | 70.1 |
| Msa1333560 | AT1G17800.1 | 36.364 | 99 | 60 | 2 | 36 | 133 | 39 | 135 | 1.30e-13 | 66.6 |
| Msa1333560 | AT4G28365.1 | 33.884 | 121 | 71 | 4 | 17 | 134 | 12 | 126 | 1.38e-13 | 67.8 |
| Msa1333560 | AT4G27520.1 | 36.441 | 118 | 68 | 4 | 20 | 134 | 15 | 128 | 2.73e-13 | 68.9 |
| Msa1333560 | AT2G23990.1 | 37.500 | 120 | 65 | 5 | 40 | 152 | 29 | 145 | 1.53e-12 | 65.1 |
| Msa1333560 | AT2G31050.1 | 38.261 | 115 | 67 | 3 | 33 | 145 | 24 | 136 | 1.59e-12 | 64.7 |
| Msa1333560 | AT3G60280.1 | 37.736 | 106 | 62 | 3 | 30 | 134 | 16 | 118 | 7.54e-12 | 63.5 |
| Msa1333560 | AT4G31840.1 | 32.283 | 127 | 77 | 5 | 14 | 134 | 4 | 127 | 1.36e-11 | 62.0 |
| Msa1333560 | AT3G27200.1 | 30.508 | 118 | 79 | 2 | 18 | 134 | 6 | 121 | 1.39e-11 | 61.6 |
| Msa1333560 | AT3G60270.1 | 35.577 | 104 | 65 | 2 | 31 | 134 | 19 | 120 | 4.19e-11 | 60.8 |
| Msa1333560 | AT5G14345.1 | 33.577 | 137 | 80 | 5 | 24 | 153 | 2 | 134 | 4.84e-11 | 59.7 |
| Msa1333560 | AT4G30590.1 | 35.922 | 103 | 58 | 4 | 38 | 134 | 28 | 128 | 5.74e-11 | 60.5 |
| Msa1333560 | AT2G26720.1 | 35.577 | 104 | 63 | 3 | 33 | 134 | 24 | 125 | 8.99e-11 | 60.1 |
Find 58 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTCTGCCACAAGGTTTA+TGG | 0.190110 | 8_4:+53711797 | Msa1333560:CDS |
| GGGATTCATTCATTTATTTA+TGG | 0.202648 | 8_4:+53714029 | Msa1333560:CDS |
| TATATTATGTTTGGAGTTCT+TGG | 0.223464 | 8_4:+53717366 | Msa1333560:three_prime_UTR |
| TATATTATGTTTGGAGTTCT+TGG | 0.223464 | 8_4:+53717500 | Msa1333560:three_prime_UTR |
| TGCAAATGCTTATGATTATT+AGG | 0.237384 | 8_4:+53717406 | Msa1333560:three_prime_UTR |
| TGCAAATGCTTATGATTATT+AGG | 0.237384 | 8_4:+53717540 | Msa1333560:three_prime_UTR |
| GTTTGACTCTATATTATGTT+TGG | 0.286542 | 8_4:+53717357 | Msa1333560:three_prime_UTR |
| GTTTGACTCTATATTATGTT+TGG | 0.286542 | 8_4:+53717491 | Msa1333560:three_prime_UTR |
| AATGACATCTCCTTCTCTAA+TGG | 0.346915 | 8_4:-53717127 | None:intergenic |
| TCAAAACTCAGCCAAATAAA+AGG | 0.363604 | 8_4:-53717322 | None:intergenic |
| TCAAAACTCAGCCAAATAAA+AGG | 0.363604 | 8_4:-53717456 | None:intergenic |
| CCGACCATCCACTTCACAAT+TGG | 0.372838 | 8_4:+53713786 | Msa1333560:CDS |
| TCACTTCTAGTACATTCATT+TGG | 0.385696 | 8_4:-53713736 | None:intergenic |
| GTTTATGGTTGGTGGTAGAA+TGG | 0.400420 | 8_4:+53711812 | Msa1333560:CDS |
| CCACTTCACAATTGGACAAC+TGG | 0.404662 | 8_4:+53713794 | Msa1333560:CDS |
| ACAATGGTGTTTCTGTTACT+TGG | 0.406835 | 8_4:+53711747 | Msa1333560:CDS |
| CGCTCAAGTTGAGAAAGTTA+TGG | 0.416411 | 8_4:+53717017 | Msa1333560:CDS |
| ATGACATCTCCTTCTCTAAT+GGG | 0.417593 | 8_4:-53717126 | None:intergenic |
| GCAACATTCCTTTCTTCTAA+AGG | 0.419170 | 8_4:+53713962 | Msa1333560:CDS |
| AGCATTTCTACAATGGTGAT+TGG | 0.420256 | 8_4:+53711877 | Msa1333560:CDS |
| AGATTTGTCCTTTAGAAGAA+AGG | 0.430408 | 8_4:-53713970 | None:intergenic |
| GCCACAAGGTTTATGGTTGG+TGG | 0.435295 | 8_4:+53711804 | Msa1333560:CDS |
| AAGGTCTAGTAATAATAAAT+AGG | 0.443893 | 8_4:-53717303 | None:intergenic |
| AGTAATAATAAATAGGTCAT+AGG | 0.445981 | 8_4:-53717296 | None:intergenic |
| CACAATTGGACAACTGGAGC+TGG | 0.466848 | 8_4:+53713800 | Msa1333560:CDS |
| TGTTCTTGTCATGTTGCCTA+TGG | 0.468041 | 8_4:+53711776 | Msa1333560:CDS |
| TACTATTTCATCAGCGGCAA+AGG | 0.470534 | 8_4:+53713857 | Msa1333560:CDS |
| GCTCAAGTTGAGAAAGTTAT+GGG | 0.472061 | 8_4:+53717018 | Msa1333560:CDS |
| TAACTACACTACTTGGGCTA+AGG | 0.476475 | 8_4:+53711851 | Msa1333560:CDS |
| TTTATGGTTGGTGGTAGAAT+GGG | 0.481424 | 8_4:+53711813 | Msa1333560:CDS |
| GAGAAAGTTATGGGTCGTAC+TGG | 0.491245 | 8_4:+53717027 | Msa1333560:CDS |
| CTTCTCTCTCAGACTCAAGT+AGG | 0.493446 | 8_4:-53717152 | None:intergenic |
| TGCCTATGGTTTCTGCCACA+AGG | 0.493859 | 8_4:+53711790 | Msa1333560:CDS |
| AGTAACAGAAACACCATTGT+TGG | 0.496883 | 8_4:-53711744 | None:intergenic |
| AAGATATAATAAAGCAATGC+TGG | 0.501496 | 8_4:+53717220 | Msa1333560:three_prime_UTR |
| AACTACACTACTTGGGCTAA+GGG | 0.519375 | 8_4:+53711852 | Msa1333560:CDS |
| TTCAACAATTTCACCAACAA+TGG | 0.536080 | 8_4:+53711731 | Msa1333560:CDS |
| TCTGCCACAAGGTTTATGGT+TGG | 0.540361 | 8_4:+53711801 | Msa1333560:CDS |
| TAATGGCGAGTCACGTTCAA+CGG | 0.551424 | 8_4:-53713836 | None:intergenic |
| TGAGAAAAGCTACTCTCTAT+CGG | 0.552479 | 8_4:-53717185 | None:intergenic |
| AGAAGAAAGGAATGTTGCAC+CGG | 0.561585 | 8_4:-53713957 | None:intergenic |
| TGGTTGGTGGTAGAATGGGT+TGG | 0.565349 | 8_4:+53711817 | Msa1333560:CDS |
| ATCTAGAGGACAGGTCACTC+AGG | 0.566307 | 8_4:+53717050 | Msa1333560:CDS |
| CGCCATTACTATTTCATCAG+CGG | 0.567316 | 8_4:+53713851 | Msa1333560:CDS |
| TCGTACTGGATCTAGAGGAC+AGG | 0.594159 | 8_4:+53717041 | Msa1333560:CDS |
| TGCCGCTGATGAAATAGTAA+TGG | 0.603131 | 8_4:-53713853 | None:intergenic |
| ATGAGAATCGCTACATCATG+AGG | 0.604858 | 8_4:+53717091 | Msa1333560:CDS |
| TTCTCTCTCAGACTCAAGTA+GGG | 0.606054 | 8_4:-53717151 | None:intergenic |
| AACCTTGTGGCAGAAACCAT+AGG | 0.607502 | 8_4:-53711792 | None:intergenic |
| GTGAAGGGACCCATTAGAGA+AGG | 0.608349 | 8_4:+53717117 | Msa1333560:CDS |
| CCAGTTGTCCAATTGTGAAG+TGG | 0.610427 | 8_4:-53713794 | None:intergenic |
| ATGGGTCGTACTGGATCTAG+AGG | 0.632832 | 8_4:+53717036 | Msa1333560:CDS |
| AAGGGCAAGCATTTCTACAA+TGG | 0.634172 | 8_4:+53711870 | Msa1333560:CDS |
| CTACATCATGAGGAATGTGA+AGG | 0.634929 | 8_4:+53717101 | Msa1333560:CDS |
| TACATCATGAGGAATGTGAA+GGG | 0.647475 | 8_4:+53717102 | Msa1333560:CDS |
| TTGTCCAATTGTGAAGTGGA+TGG | 0.661754 | 8_4:-53713790 | None:intergenic |
| CCAATTGTGAAGTGGATGGT+CGG | 0.668169 | 8_4:-53713786 | None:intergenic |
| ACCACCAACCATAAACCTTG+TGG | 0.669362 | 8_4:-53711805 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTTAATTTGATATTTTA+TGG | + | chr8_4:53712044-53712063 | Msa1333560:intron | 10.0% |
| !!! | ATCATTAATTTGATATTTTA+TGG | + | chr8_4:53712302-53712321 | Msa1333560:intron | 10.0% |
| !!! | TCATTTTCTTAAATTATTAA+TGG | - | chr8_4:53712888-53712907 | None:intergenic | 10.0% |
| !!! | AATTAAATATTTTCTTCTTT+AGG | + | chr8_4:53713299-53713318 | Msa1333560:intron | 10.0% |
| !!! | ATTAAATATTTTCTTCTTTA+GGG | + | chr8_4:53713300-53713319 | Msa1333560:intron | 10.0% |
| !!! | ACTTGTTTAATTTAATTTAT+TGG | + | chr8_4:53714292-53714311 | Msa1333560:intron | 10.0% |
| !! | TAAATTATTTATGAAATATG+TGG | - | chr8_4:53714632-53714651 | None:intergenic | 10.0% |
| !!! | TTAAAACTTTTGAAATTTAA+AGG | - | chr8_4:53715050-53715069 | None:intergenic | 10.0% |
| !!! | AGTCATTTTATTAATTAAAT+TGG | + | chr8_4:53715893-53715912 | Msa1333560:intron | 10.0% |
| !!! | GTCATTTTATTAATTAAATT+GGG | + | chr8_4:53715894-53715913 | Msa1333560:intron | 10.0% |
| !!! | TAATTTTTTATTTTAAGACT+CGG | - | chr8_4:53715985-53716004 | None:intergenic | 10.0% |
| !! | TTTCATAAACAAAAATATTA+AGG | - | chr8_4:53716609-53716628 | None:intergenic | 10.0% |
| !!! | TTGATATTTTATGGATTAAT+AGG | + | chr8_4:53712311-53712330 | Msa1333560:intron | 15.0% |
| !!! | ATTGGTTAATCTTAAATTTT+TGG | + | chr8_4:53712347-53712366 | Msa1333560:intron | 15.0% |
| !!! | TTGGTTAATCTTAAATTTTT+GGG | + | chr8_4:53712348-53712367 | Msa1333560:intron | 15.0% |
| !! | ATAGTAAATAAACAATCAAA+AGG | - | chr8_4:53712545-53712564 | None:intergenic | 15.0% |
| !!! | ATTTACTATTTTCTTTCAAT+AGG | + | chr8_4:53712556-53712575 | Msa1333560:intron | 15.0% |
| !!! | TTTACTATTTTCTTTCAATA+GGG | + | chr8_4:53712557-53712576 | Msa1333560:intron | 15.0% |
| !! | TAACAAAAAATGATAGAAAA+AGG | - | chr8_4:53712610-53712629 | None:intergenic | 15.0% |
| !!! | TGTATTATTTTACTTCATTT+TGG | - | chr8_4:53713136-53713155 | None:intergenic | 15.0% |
| !!! | AAATCACTTTTATAACAATA+TGG | - | chr8_4:53713494-53713513 | None:intergenic | 15.0% |
| !!! | TCATTTATAATATTTTGCAT+TGG | + | chr8_4:53714132-53714151 | Msa1333560:intron | 15.0% |
| !! | AAAAAAAATGATCATTTGTA+GGG | - | chr8_4:53715284-53715303 | None:intergenic | 15.0% |
| !! | AAAAAAAAATGATCATTTGT+AGG | - | chr8_4:53715285-53715304 | None:intergenic | 15.0% |
| !!! | AAATTTTACAATGACAATAT+AGG | - | chr8_4:53715819-53715838 | None:intergenic | 15.0% |
| !!! | TATTGTCATTGTAAAATTTT+AGG | + | chr8_4:53715820-53715839 | Msa1333560:intron | 15.0% |
| !!! | ATTGTCATTGTAAAATTTTA+GGG | + | chr8_4:53715821-53715840 | Msa1333560:intron | 15.0% |
| !!! | AAAATTGTTTTTTTGCAATT+GGG | - | chr8_4:53716370-53716389 | None:intergenic | 15.0% |
| !!! | AAAAATTGTTTTTTTGCAAT+TGG | - | chr8_4:53716371-53716390 | None:intergenic | 15.0% |
| !! | AAAATAAAAGTAACATACAA+GGG | - | chr8_4:53716640-53716659 | None:intergenic | 15.0% |
| !!! | AAATTTTAACTACACTACTT+GGG | + | chr8_4:53711845-53711864 | Msa1333560:CDS | 20.0% |
| !!! | TTATGGACTAATTAGTAAAA+TGG | + | chr8_4:53712061-53712080 | Msa1333560:intron | 20.0% |
| !!! | TTAGTTAATCTTAGATCTTT+TGG | + | chr8_4:53712089-53712108 | Msa1333560:intron | 20.0% |
| !!! | TAGTTAATCTTAGATCTTTT+GGG | + | chr8_4:53712090-53712109 | Msa1333560:intron | 20.0% |
| !!! | TTGATTAATCTTAGATCTTT+TGG | + | chr8_4:53712213-53712232 | Msa1333560:intron | 20.0% |
| !!! | TGATTAATCTTAGATCTTTT+GGG | + | chr8_4:53712214-53712233 | Msa1333560:intron | 20.0% |
| !! | GGGTTTATTTAATTAATCTT+AGG | + | chr8_4:53712234-53712253 | Msa1333560:intron | 20.0% |
| !!! | AATCACCTTTTTTAACAAAT+AGG | - | chr8_4:53713326-53713345 | None:intergenic | 20.0% |
| !! | AAACTGAAAAAATGAAATCA+AGG | - | chr8_4:53713700-53713719 | None:intergenic | 20.0% |
| !!! | TTTATAATATTTTGCATTGG+TGG | + | chr8_4:53714135-53714154 | Msa1333560:intron | 20.0% |
| !! | TTAAGAAACAAGAAAAATGA+TGG | - | chr8_4:53714418-53714437 | None:intergenic | 20.0% |
| !! | TTGAATATATAGTTTGATCA+AGG | + | chr8_4:53714473-53714492 | Msa1333560:intron | 20.0% |
| !! | ACAAAAATAACTATGATTGA+TGG | - | chr8_4:53714734-53714753 | None:intergenic | 20.0% |
| !! | TTGTAAAATGAAACAAGAAT+AGG | + | chr8_4:53714837-53714856 | Msa1333560:intron | 20.0% |
| !!! | GCTTTCTAAAATTATGTTTA+TGG | + | chr8_4:53715523-53715542 | Msa1333560:intron | 20.0% |
| !!! | TTTTTGCTTATAATAGTAAC+CGG | - | chr8_4:53715589-53715608 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAATTGACTTTTT+AGG | + | chr8_4:53715599-53715618 | Msa1333560:intron | 20.0% |
| !!! | TAAGCAAAAATTGACTTTTT+AGG | - | chr8_4:53715599-53715618 | None:intergenic | 20.0% |
| !! | ACCAACTAAATATGATTATA+AGG | + | chr8_4:53715863-53715882 | Msa1333560:intron | 20.0% |
| !! | CCAACTAAATATGATTATAA+GGG | + | chr8_4:53715864-53715883 | Msa1333560:intron | 20.0% |
| !!! | TTGCAAAAAAACAATTTTTG+TGG | + | chr8_4:53716372-53716391 | Msa1333560:intron | 20.0% |
| !! | CAAAATAAAAGTAACATACA+AGG | - | chr8_4:53716641-53716660 | None:intergenic | 20.0% |
| !! | AGTAATAATAAATAGGTCAT+AGG | - | chr8_4:53717299-53717318 | None:intergenic | 20.0% |
| !! | AAGGTCTAGTAATAATAAAT+AGG | - | chr8_4:53717306-53717325 | None:intergenic | 20.0% |
| !!! | TTATTACTAGACCTTTTATT+TGG | + | chr8_4:53717311-53717330 | Msa1333560:three_prime_UTR | 20.0% |
| !!! | TTATTACTAGACCTTTTATT+TGG | + | chr8_4:53717311-53717330 | Msa1333560:three_prime_UTR | 20.0% |
| !!! | CAAATTTTAACTACACTACT+TGG | + | chr8_4:53711844-53711863 | Msa1333560:CDS | 25.0% |
| !!! | TCTCTCTAAAATAGTTACTT+TGG | + | chr8_4:53711941-53711960 | Msa1333560:intron | 25.0% |
| !! | TTTGTGTACTTTGTTTAGAT+TGG | + | chr8_4:53711964-53711983 | Msa1333560:intron | 25.0% |
| !!! | TTAGATCTTTTGGGATTATT+TGG | + | chr8_4:53712099-53712118 | Msa1333560:intron | 25.0% |
| !! | TTGATATTTTCTTGACCAAT+AGG | + | chr8_4:53712167-53712186 | Msa1333560:intron | 25.0% |
| !! | TTTATGGATTAATAGGCAAA+AGG | + | chr8_4:53712318-53712337 | Msa1333560:intron | 25.0% |
| !! | TTATGGATTAATAGGCAAAA+GGG | + | chr8_4:53712319-53712338 | Msa1333560:intron | 25.0% |
| !! | TTTACTTGTGTTTCTATGTT+TGG | + | chr8_4:53712984-53713003 | Msa1333560:intron | 25.0% |
| !!! | TAAGCAAGTTTAGCTATTTT+AGG | + | chr8_4:53713021-53713040 | Msa1333560:intron | 25.0% |
| ! | ATTATTGAGTTCATAAACAG+TGG | - | chr8_4:53713056-53713075 | None:intergenic | 25.0% |
| !!! | CTTCATTTTGGTTGAAATAT+GGG | - | chr8_4:53713124-53713143 | None:intergenic | 25.0% |
| !!! | ACTTCATTTTGGTTGAAATA+TGG | - | chr8_4:53713125-53713144 | None:intergenic | 25.0% |
| ! | GTGATTTATCATTACTCTTA+AGG | + | chr8_4:53713235-53713254 | Msa1333560:intron | 25.0% |
| ! | TTAAGACTATGACCAAAATT+AGG | - | chr8_4:53713262-53713281 | None:intergenic | 25.0% |
| !! | TTTCAGTTTTTGTGTATGAT+AGG | + | chr8_4:53713711-53713730 | Msa1333560:intron | 25.0% |
| ! | GGGATTCATTCATTTATTTA+TGG | + | chr8_4:53714029-53714048 | Msa1333560:CDS | 25.0% |
| ! | TTTATTGGAGAAATCAAATG+CGG | + | chr8_4:53714307-53714326 | Msa1333560:intron | 25.0% |
| !!! | GAAATGTTGTTTTATGCTTT+TGG | + | chr8_4:53714338-53714357 | Msa1333560:intron | 25.0% |
| !! | TAGTATCAAAAAATGGACTT+AGG | - | chr8_4:53714442-53714461 | None:intergenic | 25.0% |
| ! | TAGACGATAGTATCAAAAAA+TGG | - | chr8_4:53714449-53714468 | None:intergenic | 25.0% |
| ! | GAAATTTAAAGGACTAACTT+GGG | - | chr8_4:53715039-53715058 | None:intergenic | 25.0% |
| ! | TGAAATTTAAAGGACTAACT+TGG | - | chr8_4:53715040-53715059 | None:intergenic | 25.0% |
| !! | ATCAAAACACTGCATTTTAA+AGG | + | chr8_4:53715165-53715184 | Msa1333560:intron | 25.0% |
| ! | AATCAAAACACTGTGTTTAA+TGG | - | chr8_4:53715309-53715328 | None:intergenic | 25.0% |
| ! | TGTTAAGTTTCAAAGACTTT+GGG | - | chr8_4:53715333-53715352 | None:intergenic | 25.0% |
| ! | ATGTTAAGTTTCAAAGACTT+TGG | - | chr8_4:53715334-53715353 | None:intergenic | 25.0% |
| !! | TAGTTCTTAAGTTGTTGAAT+TGG | - | chr8_4:53715363-53715382 | None:intergenic | 25.0% |
| !!! | ATTGACAAGTTTTGATTGAA+TGG | - | chr8_4:53715444-53715463 | None:intergenic | 25.0% |
| !! | ACTTGTCAATAAGTTCTTTT+TGG | + | chr8_4:53715454-53715473 | Msa1333560:intron | 25.0% |
| ! | AAGCAAAAAAAAAACTCAAG+TGG | - | chr8_4:53715507-53715526 | None:intergenic | 25.0% |
| ! | CATCTAATAAATGATGTATG+TGG | - | chr8_4:53715662-53715681 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr8_4:53715697-53715716 | Msa1333560:intron | 25.0% |
| ! | TTTACAATGACAATATAGGT+TGG | - | chr8_4:53715815-53715834 | None:intergenic | 25.0% |
| ! | CCCTTATAATCATATTTAGT+TGG | - | chr8_4:53715867-53715886 | None:intergenic | 25.0% |
| ! | CCAAATAACATTAGCATAAA+AGG | - | chr8_4:53716469-53716488 | None:intergenic | 25.0% |
| !! | CCTTTTATGCTAATGTTATT+TGG | + | chr8_4:53716466-53716485 | Msa1333560:intron | 25.0% |
| ! | TGAGATATGATGTATTCAAT+TGG | + | chr8_4:53716571-53716590 | Msa1333560:intron | 25.0% |
| !!! | CGGTGTTTAAAAGTTTTAAA+TGG | + | chr8_4:53716800-53716819 | Msa1333560:intron | 25.0% |
| ! | AAGATATAATAAAGCAATGC+TGG | + | chr8_4:53717220-53717239 | Msa1333560:three_prime_UTR | 25.0% |
| !!! | TGAGTTTTGAGTAAAGATTT+TGG | + | chr8_4:53717335-53717354 | Msa1333560:three_prime_UTR | 25.0% |
| ! | GTTTGACTCTATATTATGTT+TGG | + | chr8_4:53717357-53717376 | Msa1333560:three_prime_UTR | 25.0% |
| !! | TATATTATGTTTGGAGTTCT+TGG | + | chr8_4:53717366-53717385 | Msa1333560:three_prime_UTR | 25.0% |
| ! | TGCAAATGCTTATGATTATT+AGG | + | chr8_4:53717406-53717425 | Msa1333560:three_prime_UTR | 25.0% |
| !!! | TGAGTTTTGAGTAAAGATTT+TGG | + | chr8_4:53717335-53717354 | Msa1333560:three_prime_UTR | 25.0% |
| ! | GTTTGACTCTATATTATGTT+TGG | + | chr8_4:53717357-53717376 | Msa1333560:three_prime_UTR | 25.0% |
| !! | TATATTATGTTTGGAGTTCT+TGG | + | chr8_4:53717366-53717385 | Msa1333560:three_prime_UTR | 25.0% |
| ! | TGCAAATGCTTATGATTATT+AGG | + | chr8_4:53717406-53717425 | Msa1333560:three_prime_UTR | 25.0% |
| TTCAACAATTTCACCAACAA+TGG | + | chr8_4:53711731-53711750 | Msa1333560:CDS | 30.0% | |
| ! | ATCTGAACTTGTTTGAGTAT+AGG | + | chr8_4:53711987-53712006 | Msa1333560:intron | 30.0% |
| ! | ATTGAAACTCTTTTGCCTAT+TGG | - | chr8_4:53712185-53712204 | None:intergenic | 30.0% |
| ! | AGCTTTTTGTGTCAATTTCA+TGG | + | chr8_4:53712390-53712409 | Msa1333560:intron | 30.0% |
| AGTGTTCTTGAAGAATATTG+TGG | + | chr8_4:53712458-53712477 | Msa1333560:intron | 30.0% | |
| ! | TGTCCAAAAGTATAGATTTG+AGG | + | chr8_4:53712488-53712507 | Msa1333560:intron | 30.0% |
| ! | GTCCAAAAGTATAGATTTGA+GGG | + | chr8_4:53712489-53712508 | Msa1333560:intron | 30.0% |
| AACCAAAAAAACACTCAACA+GGG | - | chr8_4:53712750-53712769 | None:intergenic | 30.0% | |
| AAACCAAAAAAACACTCAAC+AGG | - | chr8_4:53712751-53712770 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTGAAATATGGGT+GGG | - | chr8_4:53713120-53713139 | None:intergenic | 30.0% |
| TTCATTTGCAAATTAAGCCA+TGG | - | chr8_4:53713174-53713193 | None:intergenic | 30.0% | |
| AAGTAAAGAAAGTCAACATC+TGG | - | chr8_4:53713207-53713226 | None:intergenic | 30.0% | |
| ! | TACTCTTAAGGTCCTAATTT+TGG | + | chr8_4:53713247-53713266 | Msa1333560:intron | 30.0% |
| ! | TAGGGCCTATTTGTTAAAAA+AGG | + | chr8_4:53713318-53713337 | Msa1333560:intron | 30.0% |
| AGAATCTAACAAGTGTACTT+AGG | - | chr8_4:53713566-53713585 | None:intergenic | 30.0% | |
| TCACTTCTAGTACATTCATT+TGG | - | chr8_4:53713739-53713758 | None:intergenic | 30.0% | |
| ! | AGATTTGTCCTTTAGAAGAA+AGG | - | chr8_4:53713973-53713992 | None:intergenic | 30.0% |
| !!! | ATGCCTATTGTTTTTGCTAT+TGG | + | chr8_4:53713998-53714017 | Msa1333560:CDS | 30.0% |
| TGAACAAATGTAACACCATT+TGG | - | chr8_4:53714099-53714118 | None:intergenic | 30.0% | |
| ! | TGATTGTTATTGACCTCAAA+TGG | + | chr8_4:53714158-53714177 | Msa1333560:intron | 30.0% |
| ! | GATTGTTATTGACCTCAAAT+GGG | + | chr8_4:53714159-53714178 | Msa1333560:intron | 30.0% |
| ! | ATTGTTATTGACCTCAAATG+GGG | + | chr8_4:53714160-53714179 | Msa1333560:intron | 30.0% |
| !!! | TGTAGTTTTTAGGTAGTGTT+TGG | + | chr8_4:53714203-53714222 | Msa1333560:intron | 30.0% |
| GAAATCAAATGCGGAAATTA+TGG | + | chr8_4:53714316-53714335 | Msa1333560:intron | 30.0% | |
| ATGTGGATATCTACAAATTG+TGG | - | chr8_4:53714615-53714634 | None:intergenic | 30.0% | |
| !! | TATTTTTGTCATCCCTAAAC+CGG | + | chr8_4:53714745-53714764 | Msa1333560:intron | 30.0% |
| TTAAAAACAGCACATAGAAC+CGG | - | chr8_4:53714767-53714786 | None:intergenic | 30.0% | |
| CAAACTAAAAGGATCAAAAG+TGG | - | chr8_4:53715008-53715027 | None:intergenic | 30.0% | |
| CAGTTTAACTGATGTTAATG+TGG | + | chr8_4:53715122-53715141 | Msa1333560:intron | 30.0% | |
| GTTACAAATGATCATTTACG+TGG | + | chr8_4:53715218-53715237 | Msa1333560:intron | 30.0% | |
| TCAAGTGGTTCATAACTTAA+TGG | - | chr8_4:53715492-53715511 | None:intergenic | 30.0% | |
| CATCCAATAAATGATGTATG+TGG | + | chr8_4:53715624-53715643 | Msa1333560:intron | 30.0% | |
| AGACCACATACATCATTTAT+TGG | - | chr8_4:53715656-53715675 | None:intergenic | 30.0% | |
| AAAATGTGACTAGTAAGATG+AGG | + | chr8_4:53715922-53715941 | Msa1333560:intron | 30.0% | |
| AAATGTGACTAGTAAGATGA+GGG | + | chr8_4:53715923-53715942 | Msa1333560:intron | 30.0% | |
| TTGTGTGATTTACATGTTTG+TGG | + | chr8_4:53716433-53716452 | Msa1333560:intron | 30.0% | |
| AATATTGCGTGTATCATGTT+CGG | + | chr8_4:53716780-53716799 | Msa1333560:intron | 30.0% | |
| ATAATCTATGTGACAGAGTA+AGG | - | chr8_4:53716916-53716935 | None:intergenic | 30.0% | |
| TCAAAACTCAGCCAAATAAA+AGG | - | chr8_4:53717325-53717344 | None:intergenic | 30.0% | |
| TCAAAACTCAGCCAAATAAA+AGG | - | chr8_4:53717325-53717344 | None:intergenic | 30.0% | |
| AGTAACAGAAACACCATTGT+TGG | - | chr8_4:53711747-53711766 | None:intergenic | 35.0% | |
| ! | ACAATGGTGTTTCTGTTACT+TGG | + | chr8_4:53711747-53711766 | Msa1333560:CDS | 35.0% |
| !! | TTTATGGTTGGTGGTAGAAT+GGG | + | chr8_4:53711813-53711832 | Msa1333560:CDS | 35.0% |
| AGCATTTCTACAATGGTGAT+TGG | + | chr8_4:53711877-53711896 | Msa1333560:CDS | 35.0% | |
| ATAGGCAAAAGGGTTTGAAT+TGG | + | chr8_4:53712329-53712348 | Msa1333560:intron | 35.0% | |
| ! | TGCCCTCAAATCTATACTTT+TGG | - | chr8_4:53712494-53712513 | None:intergenic | 35.0% |
| ATTCTCAGATCCACAATTCT+TGG | + | chr8_4:53712641-53712660 | Msa1333560:intron | 35.0% | |
| TCAAAAGAAGCCAAGAATTG+TGG | - | chr8_4:53712654-53712673 | None:intergenic | 35.0% | |
| TATCAATGTCGTGATTGTGT+CGG | - | chr8_4:53712851-53712870 | None:intergenic | 35.0% | |
| !!! | CATTTTGGTTGAAATATGGG+TGG | - | chr8_4:53713121-53713140 | None:intergenic | 35.0% |
| TAATCTTCCAAGCACTTTCA+TGG | - | chr8_4:53713626-53713645 | None:intergenic | 35.0% | |
| ! | TGGTAGATTTTCAACACGAA+CGG | - | chr8_4:53713909-53713928 | None:intergenic | 35.0% |
| GCAACATTCCTTTCTTCTAA+AGG | + | chr8_4:53713962-53713981 | Msa1333560:CDS | 35.0% | |
| GCACCAATAGCAAAAACAAT+AGG | - | chr8_4:53714004-53714023 | None:intergenic | 35.0% | |
| CATCCTTAAACAATGCCAAA+TGG | + | chr8_4:53714081-53714100 | Msa1333560:intron | 35.0% | |
| ACACCATTTGGCATTGTTTA+AGG | - | chr8_4:53714087-53714106 | None:intergenic | 35.0% | |
| ! | GTGTGGTGTTTGTAGTTTTT+AGG | + | chr8_4:53714193-53714212 | Msa1333560:intron | 35.0% |
| !!! | TTTTGGACTAGTAGAGTAGT+AGG | + | chr8_4:53714355-53714374 | Msa1333560:intron | 35.0% |
| TAGTTTGAACAGTGTCTAAC+CGG | + | chr8_4:53714504-53714523 | Msa1333560:intron | 35.0% | |
| ATATCAACGTTGGTATGGAT+AGG | - | chr8_4:53714586-53714605 | None:intergenic | 35.0% | |
| GGGAATTCTGTCAAACTAAA+AGG | - | chr8_4:53715019-53715038 | None:intergenic | 35.0% | |
| TTAAACTGAGACTGACAACA+GGG | - | chr8_4:53715110-53715129 | None:intergenic | 35.0% | |
| TGTCAAAACGATGCGTTTAA+TGG | + | chr8_4:53715196-53715215 | Msa1333560:intron | 35.0% | |
| GTGGTTCATAACTTAATGGT+GGG | - | chr8_4:53715488-53715507 | None:intergenic | 35.0% | |
| AGTGGTTCATAACTTAATGG+TGG | - | chr8_4:53715489-53715508 | None:intergenic | 35.0% | |
| ACATAAACATATACTCCCTC+CGG | + | chr8_4:53715567-53715586 | Msa1333560:intron | 35.0% | |
| TGCTTATAATAGTAACCGGA+GGG | - | chr8_4:53715585-53715604 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTAACCGG+AGG | - | chr8_4:53715586-53715605 | None:intergenic | 35.0% | |
| AATGTGACTAGTAAGATGAG+GGG | + | chr8_4:53715924-53715943 | Msa1333560:intron | 35.0% | |
| ! | ACTAGTACTTTTCGTGTTCT+TGG | + | chr8_4:53715951-53715970 | Msa1333560:intron | 35.0% |
| AACCTAAGAACAAGGAAGAA+AGG | + | chr8_4:53716055-53716074 | Msa1333560:intron | 35.0% | |
| AACCTTTCTTCCTTGTTCTT+AGG | - | chr8_4:53716060-53716079 | None:intergenic | 35.0% | |
| !! | TTCACGTTGTTGGTTTCAAT+TGG | + | chr8_4:53716404-53716423 | Msa1333560:intron | 35.0% |
| TACATGTTTGTGGTCTCAAT+TGG | + | chr8_4:53716443-53716462 | Msa1333560:intron | 35.0% | |
| ACACCTTCAACCTAAAGTAT+CGG | - | chr8_4:53716522-53716541 | None:intergenic | 35.0% | |
| AGTGATTGAATGCAATGTGT+CGG | - | chr8_4:53716745-53716764 | None:intergenic | 35.0% | |
| ! | TGGATATTCAGATTGACTTC+AGG | + | chr8_4:53716820-53716839 | Msa1333560:intron | 35.0% |
| ATCACAACATTTGACTCTCA+TGG | - | chr8_4:53716857-53716876 | None:intergenic | 35.0% | |
| !! | GCTCAAGTTGAGAAAGTTAT+GGG | + | chr8_4:53717018-53717037 | Msa1333560:CDS | 35.0% |
| TACATCATGAGGAATGTGAA+GGG | + | chr8_4:53717102-53717121 | Msa1333560:CDS | 35.0% | |
| ATGACATCTCCTTCTCTAAT+GGG | - | chr8_4:53717129-53717148 | None:intergenic | 35.0% | |
| AATGACATCTCCTTCTCTAA+TGG | - | chr8_4:53717130-53717149 | None:intergenic | 35.0% | |
| TGAGAAAAGCTACTCTCTAT+CGG | - | chr8_4:53717188-53717207 | None:intergenic | 35.0% | |
| ! | TAGAGAGTAGCTTTTCTCAA+TGG | + | chr8_4:53717189-53717208 | Msa1333560:exon | 35.0% |
| ! | AGTAGCTTTTCTCAATGGTT+TGG | + | chr8_4:53717194-53717213 | Msa1333560:three_prime_UTR | 35.0% |
| !!! | ATAAAGCAATGCTGGTTTTG+TGG | + | chr8_4:53717228-53717247 | Msa1333560:three_prime_UTR | 35.0% |
| TGTTCTTGTCATGTTGCCTA+TGG | + | chr8_4:53711776-53711795 | Msa1333560:CDS | 40.0% | |
| !! | GTTTATGGTTGGTGGTAGAA+TGG | + | chr8_4:53711812-53711831 | Msa1333560:CDS | 40.0% |
| TAACTACACTACTTGGGCTA+AGG | + | chr8_4:53711851-53711870 | Msa1333560:CDS | 40.0% | |
| AACTACACTACTTGGGCTAA+GGG | + | chr8_4:53711852-53711871 | Msa1333560:CDS | 40.0% | |
| AAGGGCAAGCATTTCTACAA+TGG | + | chr8_4:53711870-53711889 | Msa1333560:CDS | 40.0% | |
| CTCAACAGGGAGAAAAAAGA+GGG | - | chr8_4:53712737-53712756 | None:intergenic | 40.0% | |
| ACTCAACAGGGAGAAAAAAG+AGG | - | chr8_4:53712738-53712757 | None:intergenic | 40.0% | |
| !!! | CTCCCTGTTGAGTGTTTTTT+TGG | + | chr8_4:53712745-53712764 | Msa1333560:intron | 40.0% |
| !! | GACTGTAGCTTAATTTGTGC+TGG | + | chr8_4:53712802-53712821 | Msa1333560:intron | 40.0% |
| TGAGTTCATAAACAGTGGCA+GGG | - | chr8_4:53713051-53713070 | None:intergenic | 40.0% | |
| TTGAGTTCATAAACAGTGGC+AGG | - | chr8_4:53713052-53713071 | None:intergenic | 40.0% | |
| ! | ATTAAGCCATGGATTGAGGA+GGG | - | chr8_4:53713163-53713182 | None:intergenic | 40.0% |
| ! | AATTAAGCCATGGATTGAGG+AGG | - | chr8_4:53713164-53713183 | None:intergenic | 40.0% |
| ! | GCAAATTAAGCCATGGATTG+AGG | - | chr8_4:53713167-53713186 | None:intergenic | 40.0% |
| ATGTAGCGATCTTACTCAGT+GGG | - | chr8_4:53713459-53713478 | None:intergenic | 40.0% | |
| !! | AGCACTTTCATGGATTGGAT+TGG | - | chr8_4:53713616-53713635 | None:intergenic | 40.0% |
| !! | ATCCAATCCATGAAAGTGCT+TGG | + | chr8_4:53713616-53713635 | Msa1333560:intron | 40.0% |
| TTCCAAGCACTTTCATGGAT+TGG | - | chr8_4:53713621-53713640 | None:intergenic | 40.0% | |
| TTGTCCAATTGTGAAGTGGA+TGG | - | chr8_4:53713793-53713812 | None:intergenic | 40.0% | |
| CGCCATTACTATTTCATCAG+CGG | + | chr8_4:53713851-53713870 | Msa1333560:CDS | 40.0% | |
| TGCCGCTGATGAAATAGTAA+TGG | - | chr8_4:53713856-53713875 | None:intergenic | 40.0% | |
| TACTATTTCATCAGCGGCAA+AGG | + | chr8_4:53713857-53713876 | Msa1333560:CDS | 40.0% | |
| AGAAGAAAGGAATGTTGCAC+CGG | - | chr8_4:53713960-53713979 | None:intergenic | 40.0% | |
| !!! | TTTTTGCTATTGGTGCAGCA+TGG | + | chr8_4:53714008-53714027 | Msa1333560:CDS | 40.0% |
| !!! | TTTTGCTATTGGTGCAGCAT+GGG | + | chr8_4:53714009-53714028 | Msa1333560:CDS | 40.0% |
| TTGACCTCAAATGGGGTTAA+AGG | + | chr8_4:53714167-53714186 | Msa1333560:intron | 40.0% | |
| TGACCTCAAATGGGGTTAAA+GGG | + | chr8_4:53714168-53714187 | Msa1333560:intron | 40.0% | |
| TATCCATTGACATCCCTAGA+AGG | - | chr8_4:53714535-53714554 | None:intergenic | 40.0% | |
| GCATGATATCAACGTTGGTA+TGG | - | chr8_4:53714591-53714610 | None:intergenic | 40.0% | |
| CTAACAGCATGCGAATAATG+TGG | + | chr8_4:53714960-53714979 | Msa1333560:intron | 40.0% | |
| GTTAAACTGAGACTGACAAC+AGG | - | chr8_4:53715111-53715130 | None:intergenic | 40.0% | |
| !! | ACTGCATTTTAAAGGCTCGA+GGG | + | chr8_4:53715173-53715192 | Msa1333560:intron | 40.0% |
| !! | GTCAATGTCATTGACTTGTG+TGG | - | chr8_4:53715417-53715436 | None:intergenic | 40.0% |
| TTGCTTATAATAGTGACCGG+AGG | + | chr8_4:53715700-53715719 | Msa1333560:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr8_4:53715701-53715720 | Msa1333560:intron | 40.0% | |
| ! | TTCATTTGAAGTACTCCCTC+CGG | - | chr8_4:53715719-53715738 | None:intergenic | 40.0% |
| TTGTTCTTAGGTTTGTGGTC+TGG | - | chr8_4:53716048-53716067 | None:intergenic | 40.0% | |
| AGACCACAAACCTAAGAACA+AGG | + | chr8_4:53716047-53716066 | Msa1333560:intron | 40.0% | |
| CTTCCTTGTTCTTAGGTTTG+TGG | - | chr8_4:53716053-53716072 | None:intergenic | 40.0% | |
| ! | ACGAACTTGATGTTGGTGAA+GGG | - | chr8_4:53716127-53716146 | None:intergenic | 40.0% |
| ! | AACGAACTTGATGTTGGTGA+AGG | - | chr8_4:53716128-53716147 | None:intergenic | 40.0% |
| CAGAGAAACGAACTTGATGT+TGG | - | chr8_4:53716134-53716153 | None:intergenic | 40.0% | |
| !! | GCTCTTGTTGTGTTTTTGTG+AGG | + | chr8_4:53716245-53716264 | Msa1333560:intron | 40.0% |
| GTTCAAACACTTCACGTTGT+TGG | + | chr8_4:53716394-53716413 | Msa1333560:intron | 40.0% | |
| TGTCCAACACTTACTTGCAT+CGG | - | chr8_4:53716722-53716741 | None:intergenic | 40.0% | |
| ! | ATTCAGATTGACTTCAGGCA+CGG | + | chr8_4:53716825-53716844 | Msa1333560:intron | 40.0% |
| GAATGTGTTTGTGTTTGAGC+AGG | + | chr8_4:53716974-53716993 | Msa1333560:intron | 40.0% | |
| !! | CGCTCAAGTTGAGAAAGTTA+TGG | + | chr8_4:53717017-53717036 | Msa1333560:CDS | 40.0% |
| ATGAGAATCGCTACATCATG+AGG | + | chr8_4:53717091-53717110 | Msa1333560:CDS | 40.0% | |
| CTACATCATGAGGAATGTGA+AGG | + | chr8_4:53717101-53717120 | Msa1333560:CDS | 40.0% | |
| TTCTCTCTCAGACTCAAGTA+GGG | - | chr8_4:53717154-53717173 | None:intergenic | 40.0% | |
| AACCTTGTGGCAGAAACCAT+AGG | - | chr8_4:53711795-53711814 | None:intergenic | 45.0% | |
| GGTTTCTGCCACAAGGTTTA+TGG | + | chr8_4:53711797-53711816 | Msa1333560:CDS | 45.0% | |
| TCTGCCACAAGGTTTATGGT+TGG | + | chr8_4:53711801-53711820 | Msa1333560:CDS | 45.0% | |
| ACCACCAACCATAAACCTTG+TGG | - | chr8_4:53711808-53711827 | None:intergenic | 45.0% | |
| !! | GGGAGAAAAAAGAGGGCATT+TGG | - | chr8_4:53712730-53712749 | None:intergenic | 45.0% |
| ACGACATTGATACTGACACG+TGG | + | chr8_4:53712859-53712878 | Msa1333560:intron | 45.0% | |
| CAATTTCCCTCCTCAATCCA+TGG | + | chr8_4:53713154-53713173 | Msa1333560:intron | 45.0% | |
| TTACTCAGTGGGATAAGGCT+TGG | - | chr8_4:53713448-53713467 | None:intergenic | 45.0% | |
| CGATCTTACTCAGTGGGATA+AGG | - | chr8_4:53713453-53713472 | None:intergenic | 45.0% | |
| CATGTAGCGATCTTACTCAG+TGG | - | chr8_4:53713460-53713479 | None:intergenic | 45.0% | |
| CACTGAGTAAGATCGCTACA+TGG | + | chr8_4:53713458-53713477 | Msa1333560:intron | 45.0% | |
| CCAATTGTGAAGTGGATGGT+CGG | - | chr8_4:53713789-53713808 | None:intergenic | 45.0% | |
| CCAGTTGTCCAATTGTGAAG+TGG | - | chr8_4:53713797-53713816 | None:intergenic | 45.0% | |
| CCACTTCACAATTGGACAAC+TGG | + | chr8_4:53713794-53713813 | Msa1333560:CDS | 45.0% | |
| TAATGGCGAGTCACGTTCAA+CGG | - | chr8_4:53713839-53713858 | None:intergenic | 45.0% | |
| ! | AGCGGCAAAGGATTTTGCTT+TGG | + | chr8_4:53713869-53713888 | Msa1333560:CDS | 45.0% |
| ! | GGCAAAGGATTTTGCTTTGG+TGG | + | chr8_4:53713872-53713891 | Msa1333560:CDS | 45.0% |
| !!! | TTTTCAGGTGCAGCTTTTGG+TGG | - | chr8_4:53713935-53713954 | None:intergenic | 45.0% |
| !!! | GCTTTTTCAGGTGCAGCTTT+TGG | - | chr8_4:53713938-53713957 | None:intergenic | 45.0% |
| AAAGCTGCACCTGAAAAAGC+CGG | + | chr8_4:53713938-53713957 | Msa1333560:CDS | 45.0% | |
| !!! | AATGTTGCACCGGCTTTTTC+AGG | - | chr8_4:53713950-53713969 | None:intergenic | 45.0% |
| TAGGTCCTTCTTGTCCATGT+GGG | + | chr8_4:53714374-53714393 | Msa1333560:intron | 45.0% | |
| ! | TAGCCTTCTAGGGATGTCAA+TGG | + | chr8_4:53714529-53714548 | Msa1333560:intron | 45.0% |
| ! | CAGCACATAGAACCGGTTTA+GGG | - | chr8_4:53714760-53714779 | None:intergenic | 45.0% |
| ! | ACAGCACATAGAACCGGTTT+AGG | - | chr8_4:53714761-53714780 | None:intergenic | 45.0% |
| GAGACTGACAACAGGGATAA+TGG | - | chr8_4:53715103-53715122 | None:intergenic | 45.0% | |
| !! | CACTGCATTTTAAAGGCTCG+AGG | + | chr8_4:53715172-53715191 | Msa1333560:intron | 45.0% |
| GATCATTTACGTGGCCAGAA+AGG | + | chr8_4:53715227-53715246 | Msa1333560:intron | 45.0% | |
| GACAACAAGAACTGCCTTTC+TGG | - | chr8_4:53715244-53715263 | None:intergenic | 45.0% | |
| TAACCGCAGCTGCGAAATTA+GGG | + | chr8_4:53716091-53716110 | Msa1333560:intron | 45.0% | |
| ! | AACTTGATGTTGGTGAAGGG+AGG | - | chr8_4:53716124-53716143 | None:intergenic | 45.0% |
| TATAGCACCGCCGATACTTT+AGG | + | chr8_4:53716509-53716528 | Msa1333560:intron | 45.0% | |
| !! | CCTTCAACCTAAAGTATCGG+CGG | - | chr8_4:53716519-53716538 | None:intergenic | 45.0% |
| TGTCCGATGCAAGTAAGTGT+TGG | + | chr8_4:53716716-53716735 | Msa1333560:intron | 45.0% | |
| GTGTTTGTGTTTGAGCAGGA+TGG | + | chr8_4:53716978-53716997 | Msa1333560:intron | 45.0% | |
| GAGAAAGTTATGGGTCGTAC+TGG | + | chr8_4:53717027-53717046 | Msa1333560:CDS | 45.0% | |
| CTTCTCTCTCAGACTCAAGT+AGG | - | chr8_4:53717155-53717174 | None:intergenic | 45.0% | |
| !! | TGTAAATTTAAAAATAAATT+TGG | + | chr8_4:53712582-53712601 | Msa1333560:intron | 5.0% |
| TGCCTATGGTTTCTGCCACA+AGG | + | chr8_4:53711790-53711809 | Msa1333560:CDS | 50.0% | |
| GCCACAAGGTTTATGGTTGG+TGG | + | chr8_4:53711804-53711823 | Msa1333560:CDS | 50.0% | |
| !! | TGGTTGGTGGTAGAATGGGT+TGG | + | chr8_4:53711817-53711836 | Msa1333560:CDS | 50.0% |
| CCGACCATCCACTTCACAAT+TGG | + | chr8_4:53713786-53713805 | Msa1333560:CDS | 50.0% | |
| CACAATTGGACAACTGGAGC+TGG | + | chr8_4:53713800-53713819 | Msa1333560:CDS | 50.0% | |
| CCACCCTTTAACCCCATTTG+AGG | - | chr8_4:53714174-53714193 | None:intergenic | 50.0% | |
| CCTCAAATGGGGTTAAAGGG+TGG | + | chr8_4:53714171-53714190 | Msa1333560:intron | 50.0% | |
| AATGGGGTTAAAGGGTGGTG+TGG | + | chr8_4:53714176-53714195 | Msa1333560:intron | 50.0% | |
| GTAGGTCCTTCTTGTCCATG+TGG | + | chr8_4:53714373-53714392 | Msa1333560:intron | 50.0% | |
| TTCCACCCACATGGACAAGA+AGG | - | chr8_4:53714382-53714401 | None:intergenic | 50.0% | |
| CAACTAGTGTTCCACCCACA+TGG | - | chr8_4:53714391-53714410 | None:intergenic | 50.0% | |
| ! | TCTAACCGGTCTAGCCTTCT+AGG | + | chr8_4:53714518-53714537 | Msa1333560:intron | 50.0% |
| ! | CTAACCGGTCTAGCCTTCTA+GGG | + | chr8_4:53714519-53714538 | Msa1333560:intron | 50.0% |
| ACATCCCTAGAAGGCTAGAC+CGG | - | chr8_4:53714526-53714545 | None:intergenic | 50.0% | |
| GTGGCGCATGATATCAACGT+TGG | - | chr8_4:53714596-53714615 | None:intergenic | 50.0% | |
| GTAACCGCAGCTGCGAAATT+AGG | + | chr8_4:53716090-53716109 | Msa1333560:intron | 50.0% | |
| GAACCCTAATTTCGCAGCTG+CGG | - | chr8_4:53716097-53716116 | None:intergenic | 50.0% | |
| !! | CCGCCGATACTTTAGGTTGA+AGG | + | chr8_4:53716516-53716535 | Msa1333560:intron | 50.0% |
| ATGGGTCGTACTGGATCTAG+AGG | + | chr8_4:53717036-53717055 | Msa1333560:CDS | 50.0% | |
| TCGTACTGGATCTAGAGGAC+AGG | + | chr8_4:53717041-53717060 | Msa1333560:CDS | 50.0% | |
| ATCTAGAGGACAGGTCACTC+AGG | + | chr8_4:53717050-53717069 | Msa1333560:CDS | 50.0% | |
| GTGAAGGGACCCATTAGAGA+AGG | + | chr8_4:53717117-53717136 | Msa1333560:CDS | 50.0% | |
| ! | TCAGGTGCAGCTTTTGGTGG+TGG | - | chr8_4:53713932-53713951 | None:intergenic | 55.0% |
| GTCCTTCTTGTCCATGTGGG+TGG | + | chr8_4:53714377-53714396 | Msa1333560:intron | 55.0% | |
| GATGTCCGATGCGTGCGTAT+CGG | + | chr8_4:53716546-53716565 | Msa1333560:intron | 55.0% | |
| TCAGTCCGATACGCACGCAT+CGG | - | chr8_4:53716554-53716573 | None:intergenic | 55.0% | |
| !!! | GGTGCAGCTTTTGGTGGTGG+TGG | - | chr8_4:53713929-53713948 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 53711702 | 53717577 | 53711702 | ID=Msa1333560;Name=Msa1333560 |
| chr8_4 | mRNA | 53711702 | 53717577 | 53711702 | ID=Msa1333560-mRNA-1;Parent=Msa1333560;Name=Msa1333560-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0.33|0.66|1|1|3|386|243 |
| chr8_4 | exon | 53711702 | 53711903 | 53711702 | ID=Msa1333560-mRNA-1:exon:16525;Parent=Msa1333560-mRNA-1 |
| chr8_4 | exon | 53713717 | 53714050 | 53713717 | ID=Msa1333560-mRNA-1:exon:16526;Parent=Msa1333560-mRNA-1 |
| chr8_4 | exon | 53716996 | 53717577 | 53716996 | ID=Msa1333560-mRNA-1:exon:16527;Parent=Msa1333560-mRNA-1 |
| chr8_4 | CDS | 53711702 | 53711903 | 53711702 | ID=Msa1333560-mRNA-1:cds;Parent=Msa1333560-mRNA-1 |
| chr8_4 | CDS | 53713717 | 53714050 | 53713717 | ID=Msa1333560-mRNA-1:cds;Parent=Msa1333560-mRNA-1 |
| chr8_4 | CDS | 53716996 | 53717191 | 53716996 | ID=Msa1333560-mRNA-1:cds;Parent=Msa1333560-mRNA-1 |
| chr8_4 | three_prime_UTR | 53717192 | 53717577 | 53717192 | ID=Msa1333560-mRNA-1:three_prime_utr;Parent=Msa1333560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
