AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0037410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0037410 MtrunA17_Chr1g0201121 94.686 207 2 1 1 198 1 207 1.05e-145 403
Msa0037410 MtrunA17_Chr6g0466301 85.096 208 19 3 1 198 1 206 2.23e-127 357
Msa0037410 MtrunA17_Chr6g0465491 85.096 208 19 3 1 198 1 206 2.23e-127 357
Msa0037410 MtrunA17_Chr8g0383261 69.417 206 52 2 2 198 6 209 8.00e-105 300
Msa0037410 MtrunA17_Chr2g0331691 70.149 201 44 2 4 195 6 199 1.05e-101 292
Msa0037410 MtrunA17_Chr4g0004661 68.599 207 56 1 1 198 57 263 1.74e-101 293
Msa0037410 MtrunA17_Chr4g0034871 67.943 209 53 3 1 198 1 206 9.37e-99 284
Msa0037410 MtrunA17_Chr6g0466161 70.000 180 52 1 19 198 10 187 2.33e-86 253
Msa0037410 MtrunA17_Chr6g0465471 69.444 180 53 1 19 198 10 187 1.14e-85 251
Msa0037410 MtrunA17_Chr6g0466431 72.277 101 28 0 1 101 1 101 4.67e-52 162
Msa0037410 MtrunA17_Chr6g0465611 72.277 101 28 0 1 101 1 101 4.67e-52 162
Msa0037410 MtrunA17_Chr2g0276941 38.068 176 86 5 1 160 1 169 7.02e-32 115
Msa0037410 MtrunA17_Chr8g0351861 38.650 163 84 4 8 161 16 171 1.56e-31 114
Msa0037410 MtrunA17_Chr1g0174281 39.394 165 84 4 8 163 15 172 4.81e-31 112
Msa0037410 MtrunA17_Chr4g0040781 33.673 196 114 4 8 194 13 201 5.67e-31 112
Msa0037410 MtrunA17_Chr1g0182301 34.673 199 113 5 8 197 15 205 6.85e-31 112
Msa0037410 MtrunA17_Chr2g0327911 37.126 167 91 4 8 165 15 176 1.16e-30 111
Msa0037410 MtrunA17_Chr7g0214241 37.791 172 91 4 8 170 15 179 1.16e-30 111
Msa0037410 MtrunA17_Chr6g0465601 64.865 74 26 0 100 173 4 77 1.24e-30 107
Msa0037410 MtrunA17_Chr1g0212521 34.158 202 114 6 8 198 15 208 1.38e-30 111
Msa0037410 MtrunA17_Chr8g0381841 37.576 165 87 4 8 163 17 174 1.44e-30 111
Msa0037410 MtrunA17_Chr6g0466421 67.606 71 23 0 103 173 17 87 1.90e-30 107
Msa0037410 MtrunA17_Chr4g0046261 37.037 162 86 4 8 160 13 167 2.43e-30 110
Msa0037410 MtrunA17_Chr1g0182321 34.171 199 114 5 8 197 15 205 2.94e-30 110
Msa0037410 MtrunA17_Chr4g0032201 33.173 208 113 6 8 196 12 212 3.67e-30 110
Msa0037410 MtrunA17_Chr3g0123821 37.576 165 87 4 8 163 16 173 6.31e-30 110
Msa0037410 MtrunA17_Chr4g0055081 31.527 203 118 4 10 198 11 206 8.75e-30 109
Msa0037410 MtrunA17_Chr4g0030911 34.184 196 112 5 8 194 15 202 1.11e-29 108
Msa0037410 MtrunA17_Chr2g0325091 38.554 166 84 5 8 163 11 168 1.40e-29 108
Msa0037410 MtrunA17_Chr8g0382221 33.824 204 113 6 10 198 11 207 1.42e-29 108
Msa0037410 MtrunA17_Chr2g0283131 32.984 191 112 4 8 189 13 196 1.43e-29 108
Msa0037410 MtrunA17_Chr2g0276931 34.940 166 92 4 8 164 9 167 1.66e-29 108
Msa0037410 MtrunA17_Chr7g0231131 35.377 212 108 7 8 198 15 218 1.72e-29 108
Msa0037410 MtrunA17_Chr7g0263071 37.126 167 90 4 8 165 15 175 2.12e-29 108
Msa0037410 MtrunA17_Chr8g0390561 36.264 182 98 6 10 180 11 185 2.53e-29 107
Msa0037410 MtrunA17_Chr3g0112681 35.758 165 90 4 8 163 12 169 3.40e-29 107
Msa0037410 MtrunA17_Chr4g0055651 36.145 166 90 4 8 164 8 166 3.70e-29 107
Msa0037410 MtrunA17_Chr8g0335471 36.145 166 90 4 8 164 8 166 5.17e-29 107
Msa0037410 MtrunA17_Chr6g0458081 36.047 172 94 4 8 170 6 170 6.36e-29 107
Msa0037410 MtrunA17_Chr5g0400131 31.373 204 118 5 10 198 11 207 8.95e-29 106
Msa0037410 MtrunA17_Chr2g0315551 37.654 162 85 5 8 160 13 167 1.05e-28 106
Msa0037410 MtrunA17_Chr7g0250531 35.714 168 92 4 8 166 8 168 1.34e-28 105
Msa0037410 MtrunA17_Chr5g0433561 36.970 165 88 4 10 165 12 169 1.54e-28 105
Msa0037410 MtrunA17_Chr3g0123971 32.020 203 117 4 10 198 11 206 1.55e-28 105
Msa0037410 MtrunA17_Chr3g0109721 36.970 165 88 4 10 165 12 169 7.35e-28 103
Msa0037410 MtrunA17_Chr7g0234201 35.465 172 95 4 8 170 13 177 8.07e-28 104
Msa0037410 MtrunA17_Chr2g0290891 32.227 211 114 7 8 196 6 209 4.54e-27 102
Msa0037410 MtrunA17_Chr8g0349711 32.203 177 104 4 3 170 1 170 9.60e-27 101
Msa0037410 MtrunA17_Chr2g0319951 35.185 162 89 4 8 160 13 167 2.02e-26 100
Msa0037410 MtrunA17_Chr8g0349681 35.088 171 95 4 9 170 176 339 3.17e-26 105
Msa0037410 MtrunA17_Chr8g0349681 32.584 178 104 4 8 176 384 554 3.46e-23 96.3
Msa0037410 MtrunA17_Chr8g0349681 34.132 167 94 5 3 160 8 167 1.04e-22 94.7
Msa0037410 MtrunA17_Chr1g0189361 34.731 167 93 3 8 165 14 173 5.41e-26 99.8
Msa0037410 MtrunA17_Chr7g0275991 35.583 163 89 4 8 161 20 175 6.43e-26 99.8
Msa0037410 MtrunA17_Chr6g0482721 34.969 163 90 4 8 161 12 167 4.29e-25 97.4
Msa0037410 MtrunA17_Chr1g0199331 35.928 167 90 5 9 165 32 191 9.69e-25 95.9
Msa0037410 MtrunA17_Chr8g0346421 34.969 163 90 4 8 161 26 181 1.33e-24 96.3
Msa0037410 MtrunA17_Chr8g0392931 33.871 186 105 5 8 182 14 192 1.64e-24 95.9
Msa0037410 MtrunA17_Chr8g0384311 30.693 202 121 6 8 196 13 208 1.76e-21 87.4
Msa0037410 MtrunA17_Chr7g0265001 34.568 162 88 6 10 160 18 172 8.16e-21 85.9
Msa0037410 MtrunA17_Chr1g0159481 34.568 162 91 5 8 160 17 172 3.22e-20 84.3
Msa0037410 MtrunA17_Chr3g0130271 34.969 163 90 6 8 160 12 168 3.76e-20 84.0
Msa0037410 MtrunA17_Chr3g0138121 25.654 191 120 5 9 190 14 191 5.71e-19 81.3
Msa0037410 MtrunA17_Chr3g0138101 25.654 191 120 5 9 190 14 191 5.83e-19 81.3
Msa0037410 MtrunA17_Chr3g0138111 25.654 191 120 5 9 190 14 191 6.14e-19 81.3
Msa0037410 MtrunA17_Chr1g0180291 31.343 201 119 6 9 196 15 209 8.86e-19 80.5
Msa0037410 MtrunA17_Chr2g0326141 64.912 57 20 0 120 176 299 355 2.50e-18 81.6
Msa0037410 MtrunA17_Chr1g0197331 35.583 163 88 6 9 160 16 172 5.72e-18 78.6
Msa0037410 MtrunA17_Chr6g0486041 28.877 187 109 6 8 176 6 186 1.57e-16 74.3
Msa0037410 MtrunA17_Chr2g0325101 28.495 186 107 7 1 168 1 178 1.97e-13 65.9
Msa0037410 MtrunA17_Chr5g0405791 29.775 178 99 8 1 160 1 170 5.18e-13 64.7
Msa0037410 MtrunA17_Chr8g0371501 30.337 178 98 8 1 160 1 170 8.72e-13 64.3
Msa0037410 MtrunA17_Chr4g0037021 26.178 191 117 6 8 180 6 190 1.14e-12 63.9
Msa0037410 MtrunA17_Chr3g0117931 26.486 185 112 6 8 174 8 186 1.57e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0037410 AT4G09720.1 78.261 207 35 2 1 198 1 206 5.89e-119 336
Msa0037410 AT1G22740.1 78.261 207 32 2 1 198 1 203 5.66e-116 328
Msa0037410 AT4G09720.4 76.415 212 35 3 1 198 1 211 2.01e-115 327
Msa0037410 AT4G09720.3 74.312 218 35 3 1 198 1 217 2.15e-115 327
Msa0037410 AT4G09720.6 81.395 172 31 1 27 198 2 172 6.13e-104 296
Msa0037410 AT4G09720.5 81.395 172 31 1 27 198 2 172 6.13e-104 296
Msa0037410 AT4G09720.2 81.395 172 31 1 27 198 2 172 6.13e-104 296
Msa0037410 AT1G52280.1 68.900 209 51 3 1 198 1 206 7.43e-101 290
Msa0037410 AT3G16100.1 67.464 209 54 3 1 198 1 206 2.37e-99 286
Msa0037410 AT3G18820.1 66.986 209 55 3 1 198 1 206 4.12e-97 281
Msa0037410 AT2G21880.1 66.038 212 55 4 2 198 3 212 1.31e-96 280
Msa0037410 AT1G49300.2 64.115 209 61 3 1 198 1 206 2.71e-93 271
Msa0037410 AT1G49300.1 64.115 209 61 3 1 198 1 206 2.71e-93 271
Msa0037410 AT2G21880.4 67.204 186 53 3 19 198 4 187 4.05e-88 257
Msa0037410 AT2G21880.3 67.204 186 53 3 19 198 4 187 4.05e-88 257
Msa0037410 AT2G21880.2 62.264 212 55 5 2 198 3 204 7.64e-87 254
Msa0037410 AT5G39620.1 52.683 205 82 3 6 198 3 204 3.74e-70 212
Msa0037410 AT3G12160.1 35.849 212 108 6 8 198 15 219 1.75e-33 119
Msa0037410 AT5G47960.1 35.377 212 107 7 8 196 15 219 1.94e-32 117
Msa0037410 AT5G59840.1 34.000 200 117 4 8 198 15 208 1.69e-31 114
Msa0037410 AT2G33870.1 38.889 162 83 5 8 160 13 167 2.84e-31 113
Msa0037410 AT3G53610.2 33.668 199 115 5 8 197 15 205 8.32e-31 112
Msa0037410 AT3G53610.3 33.668 199 115 5 8 197 15 205 8.32e-31 112
Msa0037410 AT3G53610.1 33.668 199 115 5 8 197 15 205 8.32e-31 112
Msa0037410 AT1G28550.1 38.889 162 83 4 8 160 13 167 1.03e-30 112
Msa0037410 AT1G09630.1 37.576 165 87 4 8 163 12 169 2.07e-30 111
Msa0037410 AT5G45750.1 37.654 162 85 4 8 160 13 167 2.18e-30 111
Msa0037410 AT3G46060.2 33.000 200 119 4 8 198 15 208 2.73e-30 111
Msa0037410 AT3G46060.3 33.000 200 119 4 8 198 15 208 2.73e-30 111
Msa0037410 AT3G46060.1 33.000 200 119 4 8 198 15 208 2.73e-30 111
Msa0037410 AT5G60860.1 37.654 162 85 4 8 160 13 167 2.95e-30 110
Msa0037410 AT3G15060.1 38.272 162 84 4 8 160 13 167 5.49e-30 110
Msa0037410 AT3G11730.1 36.416 173 94 4 1 164 1 166 2.29e-29 108
Msa0037410 AT2G44610.1 32.195 205 116 5 10 198 11 208 2.44e-29 108
Msa0037410 AT4G17530.1 35.227 176 95 5 8 171 8 176 3.51e-29 107
Msa0037410 AT5G47200.1 35.227 176 95 5 8 171 8 176 4.74e-29 107
Msa0037410 AT5G59150.1 34.545 165 92 4 8 163 12 169 7.77e-29 107
Msa0037410 AT1G05810.1 37.349 166 88 4 4 160 8 166 8.39e-29 107
Msa0037410 AT1G07410.1 31.884 207 116 6 8 196 12 211 1.07e-28 107
Msa0037410 AT1G05810.2 37.349 166 88 4 4 160 54 212 2.12e-28 107
Msa0037410 AT2G31680.1 34.302 172 97 4 8 170 12 176 2.69e-28 105
Msa0037410 AT5G65270.1 36.970 165 88 4 8 163 17 174 2.79e-28 106
Msa0037410 AT4G18800.1 35.802 162 88 4 8 160 13 167 3.19e-28 105
Msa0037410 AT1G16920.1 36.420 162 87 4 8 160 13 167 4.23e-28 105
Msa0037410 AT1G18200.1 36.364 165 89 5 8 163 13 170 6.43e-28 105
Msa0037410 AT2G43130.1 34.884 172 96 4 8 170 12 176 6.80e-28 104
Msa0037410 AT3G46830.1 34.545 165 92 4 8 163 12 169 9.33e-28 104
Msa0037410 AT3G46830.2 34.545 165 92 4 8 163 12 169 9.33e-28 104
Msa0037410 AT4G35860.1 33.721 172 98 4 8 170 6 170 9.60e-28 104
Msa0037410 AT1G02130.1 32.308 195 107 5 8 184 8 195 1.62e-27 103
Msa0037410 AT3G09900.1 35.417 192 107 5 8 190 15 198 2.24e-27 103
Msa0037410 AT4G18430.1 29.319 191 119 4 8 189 13 196 2.26e-27 103
Msa0037410 AT1G73640.1 35.758 165 90 4 8 163 13 170 3.02e-27 103
Msa0037410 AT4G17170.1 32.701 211 113 7 8 196 6 209 3.68e-27 102
Msa0037410 AT4G39990.1 35.185 162 89 4 8 160 17 171 8.73e-27 102
Msa0037410 AT5G03520.1 34.896 192 108 5 8 190 15 198 9.00e-27 102
Msa0037410 AT5G10260.1 31.068 206 116 6 10 198 11 207 1.82e-26 100
Msa0037410 AT5G45130.1 36.364 165 89 4 10 165 12 169 3.59e-26 100
Msa0037410 AT4G17160.1 34.731 167 93 4 9 166 7 166 4.84e-26 99.8
Msa0037410 AT4G39890.1 34.545 165 93 4 9 164 10 168 7.22e-26 99.8
Msa0037410 AT4G19640.1 35.758 165 90 4 10 165 12 169 9.56e-26 99.0
Msa0037410 AT1G06400.1 34.568 162 90 3 8 160 13 167 1.71e-25 98.6
Msa0037410 AT2G22290.1 31.373 204 118 6 10 198 11 207 1.92e-25 98.2
Msa0037410 AT1G01200.1 35.583 163 90 4 8 161 28 184 2.79e-25 98.6
Msa0037410 AT5G45130.2 36.196 163 88 4 12 165 22 177 3.03e-25 97.8
Msa0037410 AT3G07410.1 34.302 172 97 3 8 170 12 176 3.72e-25 97.8
Msa0037410 AT5G64990.1 36.000 175 88 5 10 171 9 172 5.37e-25 97.1
Msa0037410 AT5G03520.2 40.458 131 72 3 35 165 41 165 2.14e-24 95.5
Msa0037410 AT5G47520.1 34.132 167 94 4 8 165 14 173 2.17e-24 95.9
Msa0037410 AT3G54840.2 34.146 164 91 5 9 162 34 190 6.53e-23 91.3
Msa0037410 AT3G54840.1 34.132 167 93 5 9 165 34 193 1.45e-22 90.5
Msa0037410 AT4G35860.2 36.154 130 76 3 41 170 2 124 2.35e-22 89.0
Msa0037410 AT5G64990.2 34.615 182 88 6 10 171 9 179 2.41e-22 90.5
Msa0037410 AT3G54840.3 33.939 165 92 5 11 165 2 159 3.83e-22 88.6
Msa0037410 AT1G43890.3 36.810 163 86 6 8 160 13 168 8.29e-22 89.0
Msa0037410 AT1G43890.1 36.810 163 86 6 8 160 13 168 8.29e-22 89.0
Msa0037410 AT1G43890.2 36.810 163 86 6 8 160 13 168 8.29e-22 89.0
Msa0037410 AT4G19640.2 35.766 137 74 3 10 137 12 143 1.26e-21 86.7
Msa0037410 AT4G19640.3 37.500 120 62 2 10 120 12 127 8.41e-21 85.9
Msa0037410 AT5G03530.2 31.841 201 116 7 10 196 15 208 5.70e-20 84.0
Msa0037410 AT5G03530.1 31.841 201 116 7 10 196 15 208 5.70e-20 84.0
Msa0037410 AT5G20010.1 26.203 187 116 5 9 186 14 187 1.18e-19 83.6
Msa0037410 AT5G20020.1 26.203 187 116 5 9 186 14 187 1.91e-19 82.8
Msa0037410 AT5G59150.2 34.146 123 74 3 41 163 3 118 4.19e-19 80.9
Msa0037410 AT5G55190.1 25.654 191 120 5 9 190 14 191 9.81e-19 80.9
Msa0037410 AT4G28950.1 29.730 185 108 7 8 176 6 184 2.40e-17 77.0
Msa0037410 AT5G55080.1 24.865 185 117 5 9 184 14 185 1.84e-16 75.1
Msa0037410 AT3G09910.3 31.515 165 90 6 9 160 14 168 3.15e-16 73.9
Msa0037410 AT3G09910.1 31.515 165 90 6 9 160 14 168 3.15e-16 73.9
Msa0037410 AT3G09910.2 31.515 165 90 6 9 160 14 168 3.15e-16 73.9
Msa0037410 AT3G09910.5 31.056 161 96 5 9 160 14 168 5.55e-16 73.2
Msa0037410 AT3G09910.4 31.056 161 96 5 9 160 14 168 5.55e-16 73.2
Msa0037410 AT5G45970.1 27.933 179 105 6 8 168 6 178 1.56e-13 66.6
Msa0037410 AT1G20090.1 28.492 179 104 6 8 168 5 177 4.64e-13 65.5
Msa0037410 AT1G75840.1 29.032 186 106 7 1 168 1 178 5.67e-13 65.1
Msa0037410 AT4G35020.1 28.495 186 107 7 1 168 1 178 1.82e-12 63.5
Msa0037410 AT4G35020.2 28.495 186 107 7 1 168 1 178 1.82e-12 63.5
Msa0037410 AT4G35020.3 28.495 186 107 7 1 168 1 178 1.82e-12 63.5
Msa0037410 AT3G51300.1 28.652 178 101 7 1 160 1 170 3.27e-12 63.2
Msa0037410 AT3G48040.1 28.090 178 104 6 1 160 1 172 9.64e-12 62.0
Msa0037410 AT2G44690.1 27.485 171 100 6 8 160 18 182 1.34e-11 61.6
Msa0037410 AT2G17800.2 28.090 178 102 7 1 160 1 170 1.73e-11 61.2
Msa0037410 AT2G17800.1 28.090 178 102 7 1 160 1 170 1.73e-11 61.2
Msa0037410 AT5G62880.1 27.528 178 105 6 1 160 1 172 1.90e-11 61.2
Msa0037410 AT4G35950.1 28.090 178 102 7 1 160 1 170 2.35e-11 60.8
Msa0037410 AT5G62880.2 27.222 180 107 6 1 162 1 174 6.10e-11 59.3

Find 78 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTCCAAGCAATATAAA+TGG 0.260081 1_1:-66402016 None:intergenic
AAACAATAGTACTATCAAAA+AGG 0.261754 1_1:-66404859 None:intergenic
AATGGAAATGCCCTTGTATC+AGG 0.343477 1_1:-66401998 None:intergenic
GGTGGATGTGCATGCTGATA+TGG 0.355032 1_1:+66404710 Msa0037410:exon
CTCGAACTACCTATGTATAA+TGG 0.355553 1_1:-66400109 None:intergenic
CAAGTTTAGTCAGCAGTATA+AGG 0.371559 1_1:+66400911 Msa0037410:CDS
GCATTTCCATTTATATTGCT+TGG 0.372285 1_1:+66402010 Msa0037410:CDS
TGATTTACCACGAATTAGAT+AGG 0.376006 1_1:+66404933 Msa0037410:three_prime_UTR
CGTTTGATTCACTTGACAAC+TGG 0.386540 1_1:+66401213 Msa0037410:CDS
TGCGTGAAATTGAGCTTAAT+TGG 0.388931 1_1:-66400303 None:intergenic
CCACCACTTTGCTCACTCTC+TGG 0.394400 1_1:-66404686 None:intergenic
AAAAGTGAGTAGTTTATATA+TGG 0.396519 1_1:-66399979 None:intergenic
GGAAACAAGATTGATATTGA+TGG 0.401120 1_1:+66402031 Msa0037410:CDS
CCTGTTCACGCTCATTGGCC+AGG 0.406113 1_1:-66402261 None:intergenic
CTTTGAGACATCTGCAAAAG+AGG 0.406390 1_1:+66402195 Msa0037410:CDS
CTTGAGAATGTTGCACTCCT+AGG 0.412075 1_1:+66404895 Msa0037410:three_prime_UTR
TTGCTCAAGGTCATTGTTCT+CGG 0.416277 1_1:+66400365 Msa0037410:CDS
CATGTCCTGTTCACGCTCAT+TGG 0.416752 1_1:-66402266 None:intergenic
CTCAAAAGGGGAAAAGGAAA+AGG 0.427399 1_1:-66400187 None:intergenic
TCACTCTCTGGAACCGCCTC+AGG 0.429595 1_1:-66404674 None:intergenic
AAGGACTGGTGTGCTTCAAA+AGG 0.438389 1_1:+66402160 Msa0037410:CDS
ATGATGATTCTGTATTGTAT+TGG 0.441236 1_1:-66400228 None:intergenic
CCTGGCCAATGAGCGTGAAC+AGG 0.444323 1_1:+66402261 Msa0037410:CDS
TCATTGTTCTCGGCGATAGC+GGG 0.448213 1_1:+66400375 Msa0037410:CDS
TTATGAATGAAAACGATTGA+AGG 0.448624 1_1:+66400146 Msa0037410:five_prime_UTR
ATGTCAACTTCGAACTCAAA+AGG 0.448824 1_1:-66400201 None:intergenic
TGGAAGTACTGAATAATTGC+AGG 0.450628 1_1:+66404730 Msa0037410:three_prime_UTR
TTCGAACTCAAAAGGGGAAA+AGG 0.453130 1_1:-66400193 None:intergenic
AAAACGCAACTCCAAGACTT+TGG 0.454601 1_1:-66401139 None:intergenic
TCTAATTCGTGGTAAATCAA+TGG 0.457966 1_1:-66404929 None:intergenic
TGCTGAGTACATCATTCAAA+TGG 0.459338 1_1:-66405018 None:intergenic
GCACGAGGAGTTTCTCAAAC+AGG 0.463788 1_1:+66401235 Msa0037410:CDS
TGTCATTTCTTTGTTTATGT+CGG 0.468037 1_1:+66400082 Msa0037410:five_prime_UTR
CAGCAGTATAAGGCAACAAT+TGG 0.468961 1_1:+66400921 Msa0037410:CDS
CGCAATGACATAGCTGGTTA+CGG 0.471076 1_1:-66400332 None:intergenic
TGTCAACTTCGAACTCAAAA+GGG 0.471997 1_1:-66400200 None:intergenic
AGTGAGCAAAGTGGTGGTGG+TGG 0.473564 1_1:+66404692 Msa0037410:CDS
CAAGAGAGATTCCAAAGTCT+TGG 0.473805 1_1:+66401128 Msa0037410:CDS
AATTTGAAACACAGCATTGA+AGG 0.485101 1_1:-66404758 None:intergenic
CAGTGCTTCACATAGTTGAA+TGG 0.491680 1_1:+66405055 Msa0037410:three_prime_UTR
AGGCAAACCCTCCTGATACA+AGG 0.497414 1_1:+66401987 Msa0037410:intron
CTGTTCACGCTCATTGGCCA+GGG 0.503718 1_1:-66402260 None:intergenic
CTTCAAGCCTATCTAATTCG+TGG 0.509000 1_1:-66404940 None:intergenic
TTTGCAGATGTCTCAAAGTA+GGG 0.510999 1_1:-66402190 None:intergenic
ACAATTTACCCACACAATCA+TGG 0.519807 1_1:-66404822 None:intergenic
CACTGTATGCCATGATTGTG+TGG 0.520653 1_1:+66404813 Msa0037410:three_prime_UTR
GTCATTGTTCTCGGCGATAG+CGG 0.540348 1_1:+66400374 Msa0037410:CDS
AGGACTGGTGTGCTTCAAAA+GGG 0.543802 1_1:+66402161 Msa0037410:CDS
TTGAGAATGTTGCACTCCTA+GGG 0.559466 1_1:+66404896 Msa0037410:three_prime_UTR
CGTCTGCGCAATGACATAGC+TGG 0.563049 1_1:-66400338 None:intergenic
ATTTGAAACACAGCATTGAA+GGG 0.563465 1_1:-66404757 None:intergenic
ATGAATTGTTTAGCGTTGAG+AGG 0.565012 1_1:-66400277 None:intergenic
CTGAGAAGAAAGCAAAGGAC+TGG 0.565046 1_1:+66402146 Msa0037410:CDS
ATGACATAGCTGGTTACGGT+GGG 0.565949 1_1:-66400328 None:intergenic
TGGTAGATATGGGACACTGC+TGG 0.568483 1_1:+66401104 Msa0037410:intron
GGCAAACCCTCCTGATACAA+GGG 0.575107 1_1:+66401988 Msa0037410:intron
ACAAGATTGATATTGATGGC+GGG 0.576782 1_1:+66402035 Msa0037410:CDS
GTGTATTGCAAAGACTGCCC+TGG 0.577400 1_1:+66402243 Msa0037410:CDS
GAGAGTGAGCAAAGTGGTGG+TGG 0.590052 1_1:+66404689 Msa0037410:CDS
TCAAAAGGGGAAAAGGAAAA+GGG 0.595793 1_1:-66400186 None:intergenic
GTCGGTAATCCATTATACAT+AGG 0.607162 1_1:+66400100 Msa0037410:five_prime_UTR
AACAAGATTGATATTGATGG+CGG 0.609685 1_1:+66402034 Msa0037410:CDS
TTGGTGTTCAAATTGAGATG+TGG 0.611490 1_1:+66404978 Msa0037410:three_prime_UTR
GAGAACAATGACCTTGAGCA+AGG 0.617108 1_1:-66400363 None:intergenic
GGAAATGCCCTTGTATCAGG+AGG 0.623997 1_1:-66401995 None:intergenic
GCGCAGACGAACCTTGCTCA+AGG 0.628869 1_1:+66400352 Msa0037410:CDS
GTCAACTTCGAACTCAAAAG+GGG 0.633038 1_1:-66400199 None:intergenic
TTCACTTGACAACTGGCACG+AGG 0.633292 1_1:+66401220 Msa0037410:CDS
GAAATGCCCTTGTATCAGGA+GGG 0.644750 1_1:-66401994 None:intergenic
CGTATGATGTGAACGTCATG+AGG 0.648807 1_1:+66401189 Msa0037410:CDS
TGATTATTTATAGCTAAACA+AGG 0.651063 1_1:-66400036 None:intergenic
CCAGAGAGTGAGCAAAGTGG+TGG 0.665389 1_1:+66404686 Msa0037410:CDS
GGTTTCTGAGAAGAAAGCAA+AGG 0.667441 1_1:+66402141 Msa0037410:intron
ACTGTATGCCATGATTGTGT+GGG 0.672430 1_1:+66404814 Msa0037410:three_prime_UTR
TGACATAGCTGGTTACGGTG+GGG 0.672648 1_1:-66400327 None:intergenic
AATGACATAGCTGGTTACGG+TGG 0.700311 1_1:-66400329 None:intergenic
TGATGGCGGGAATAGTCGAG+TGG 0.710562 1_1:+66402048 Msa0037410:CDS
GTTCCAGAGAGTGAGCAAAG+TGG 0.720662 1_1:+66404683 Msa0037410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTAATTATAATGTTTTTAT+TGG + chr1_1:66402383-66402402 Msa0037410:intron 10.0%
!! ACAAATATTTAACAAATTAA+AGG - chr1_1:66402432-66402451 None:intergenic 10.0%
!!! TGAATATAATTTTAAGAAAA+TGG - chr1_1:66402701-66402720 None:intergenic 10.0%
!! AAATAAAAACTTTATGAGAT+GGG - chr1_1:66400611-66400630 None:intergenic 15.0%
!! AAAATAAAAACTTTATGAGA+TGG - chr1_1:66400612-66400631 None:intergenic 15.0%
!!! AAAGTTTTGACTTTATTTTT+TGG + chr1_1:66400769-66400788 Msa0037410:intron 15.0%
!!! AAGTTTTGACTTTATTTTTT+GGG + chr1_1:66400770-66400789 Msa0037410:intron 15.0%
!! TTATAGATATTATTTCCTTA+TGG + chr1_1:66400841-66400860 Msa0037410:intron 15.0%
!! TATAGATATTATTTCCTTAT+GGG + chr1_1:66400842-66400861 Msa0037410:intron 15.0%
!!! AAAATTTTGTTTATTTGAGT+GGG + chr1_1:66401066-66401085 Msa0037410:intron 15.0%
!!! TCTTGATATTTTATAGTTTA+TGG + chr1_1:66401347-66401366 Msa0037410:intron 15.0%
!!! AATAAATACATGCTTTTTTT+AGG + chr1_1:66401491-66401510 Msa0037410:intron 15.0%
!! AGGATTGTTTATATAATAAT+AGG + chr1_1:66401511-66401530 Msa0037410:intron 15.0%
!!! TATTTTTTTTAGAAACAAAC+AGG - chr1_1:66401772-66401791 None:intergenic 15.0%
!!! TTTGTTTCTAAAAAAAATAC+TGG + chr1_1:66401773-66401792 Msa0037410:intron 15.0%
!! ATAAGATAATTAGACATTTA+TGG - chr1_1:66402116-66402135 None:intergenic 15.0%
!!! ATTAGTTTGTTATTATTCTT+TGG + chr1_1:66402489-66402508 Msa0037410:intron 15.0%
!!! GAAATATTTTTTGTCAATAT+AGG - chr1_1:66402752-66402771 None:intergenic 15.0%
!! TCAAAGAAATCTTTATATTT+GGG - chr1_1:66402906-66402925 None:intergenic 15.0%
!! ATCAAAGAAATCTTTATATT+TGG - chr1_1:66402907-66402926 None:intergenic 15.0%
!! TATTAACAAAATACTAAGTT+AGG + chr1_1:66403846-66403865 Msa0037410:intron 15.0%
!! TTTAAAAATTCCTATTTGAA+AGG + chr1_1:66404317-66404336 Msa0037410:intron 15.0%
!! TGATTATTTATAGCTAAACA+AGG - chr1_1:66400039-66400058 None:intergenic 20.0%
!! CAATGAAAATGAAAGAAAAA+GGG - chr1_1:66400470-66400489 None:intergenic 20.0%
!! TTAAGTGTGAAATTAACAAA+CGG - chr1_1:66400549-66400568 None:intergenic 20.0%
!!! GTTTTTATTTTTAACTCATC+TGG + chr1_1:66400621-66400640 Msa0037410:intron 20.0%
!!! TAAGTGATAATTAGTTTGTT+TGG + chr1_1:66400698-66400717 Msa0037410:intron 20.0%
!!! AACTTCTGTTGTTTTTATTA+TGG + chr1_1:66400734-66400753 Msa0037410:intron 20.0%
!! ATAGATATTATTTCCTTATG+GGG + chr1_1:66400843-66400862 Msa0037410:intron 20.0%
!! CACATATCTAATTTAGTTAA+GGG - chr1_1:66400886-66400905 None:intergenic 20.0%
!!! GAAAATTTTGTTTATTTGAG+TGG + chr1_1:66401065-66401084 Msa0037410:intron 20.0%
!! TCAAGAAAAAAATTAATAGC+AGG - chr1_1:66401333-66401352 None:intergenic 20.0%
!!! ACATTCATTTTAATGTCTAT+TGG - chr1_1:66401420-66401439 None:intergenic 20.0%
!!! AGTGTTCTATCTTTTAAATT+GGG + chr1_1:66401739-66401758 Msa0037410:intron 20.0%
!! GTTATAAAAAGATGAAAGAA+TGG - chr1_1:66401821-66401840 None:intergenic 20.0%
!! ACATTTATGGACATAAATTA+AGG - chr1_1:66402103-66402122 None:intergenic 20.0%
!!! TTATTCTTTGGAAAATATCA+AGG + chr1_1:66402501-66402520 Msa0037410:intron 20.0%
!!! CTCTTACTTTTTATGAAATA+AGG - chr1_1:66402667-66402686 None:intergenic 20.0%
!! TATTTCATAAAAAGTAAGAG+CGG + chr1_1:66402667-66402686 Msa0037410:intron 20.0%
!! ATATATTAAAACAACGATGA+TGG - chr1_1:66402877-66402896 None:intergenic 20.0%
!!! TCATCGTTGTTTTAATATAT+TGG + chr1_1:66402877-66402896 Msa0037410:intron 20.0%
!! AAAGAAATCTTTATATTTGG+GGG - chr1_1:66402904-66402923 None:intergenic 20.0%
!! CAAAGAAATCTTTATATTTG+GGG - chr1_1:66402905-66402924 None:intergenic 20.0%
!!! TTATGATACTACTAATTTTG+AGG - chr1_1:66403373-66403392 None:intergenic 20.0%
!!! ACTTAGTATTTTGTTAATAG+AGG - chr1_1:66403845-66403864 None:intergenic 20.0%
!! ATGAAAAAGATAAGAGTTAT+TGG + chr1_1:66404126-66404145 Msa0037410:intron 20.0%
!!! TAGGAATTTTTAAAGATGAT+TGG - chr1_1:66404311-66404330 None:intergenic 20.0%
!!! TAAAATTTTCTTCCTTTTCT+GGG + chr1_1:66404526-66404545 Msa0037410:intron 20.0%
!! ACTCAATTTGAAAATTTAGA+AGG - chr1_1:66404577-66404596 None:intergenic 20.0%
!!! CAAATTCTTCAAATTCTTTT+TGG + chr1_1:66404775-66404794 Msa0037410:three_prime_UTR 20.0%
!! AACAATAGTACTATCAAAAA+GGG - chr1_1:66404861-66404880 None:intergenic 20.0%
!! AAACAATAGTACTATCAAAA+AGG - chr1_1:66404862-66404881 None:intergenic 20.0%
!!! TTTTGATAGTACTATTGTTT+TGG + chr1_1:66404862-66404881 Msa0037410:three_prime_UTR 20.0%
!!! TTTGATAGTACTATTGTTTT+GGG + chr1_1:66404863-66404882 Msa0037410:three_prime_UTR 20.0%
!! TGTCATTTCTTTGTTTATGT+CGG + chr1_1:66400082-66400101 Msa0037410:five_prime_UTR 25.0%
! TTATGAATGAAAACGATTGA+AGG + chr1_1:66400146-66400165 Msa0037410:five_prime_UTR 25.0%
! ATGATGATTCTGTATTGTAT+TGG - chr1_1:66400231-66400250 None:intergenic 25.0%
! TACGATTTGAATGGAAAATA+CGG - chr1_1:66400433-66400452 None:intergenic 25.0%
! TCGAATTATTACGATTTGAA+TGG - chr1_1:66400442-66400461 None:intergenic 25.0%
! GCAATGAAAATGAAAGAAAA+AGG - chr1_1:66400471-66400490 None:intergenic 25.0%
! TAAGTGTGAAATTAACAAAC+GGG - chr1_1:66400548-66400567 None:intergenic 25.0%
! ATTTCACACTTAATTGTTCA+CGG + chr1_1:66400556-66400575 Msa0037410:intron 25.0%
! GCACATATCTAATTTAGTTA+AGG - chr1_1:66400887-66400906 None:intergenic 25.0%
!!! CAACAAAAGTGTTGTTTATA+AGG - chr1_1:66401274-66401293 None:intergenic 25.0%
! CATAATGATCAAATTAAGTG+TGG - chr1_1:66401397-66401416 None:intergenic 25.0%
! TAATAGGTTTATGTTAGTTG+AGG + chr1_1:66401527-66401546 Msa0037410:intron 25.0%
! AATAGGTTTATGTTAGTTGA+GGG + chr1_1:66401528-66401547 Msa0037410:intron 25.0%
! ATGTAACCTATAAATTAGTC+AGG + chr1_1:66401636-66401655 Msa0037410:intron 25.0%
!! TAATCAACGGATAAAGTTTT+GGG + chr1_1:66401676-66401695 Msa0037410:intron 25.0%
!! CAGTGTTCTATCTTTTAAAT+TGG + chr1_1:66401738-66401757 Msa0037410:intron 25.0%
!! GTGTTCTATCTTTTAAATTG+GGG + chr1_1:66401740-66401759 Msa0037410:intron 25.0%
! AAGAATGGAAGTCAAATATA+AGG - chr1_1:66401806-66401825 None:intergenic 25.0%
! TTGTTTCCAAGCAATATAAA+TGG - chr1_1:66402019-66402038 None:intergenic 25.0%
! GAATTGTATTAACCATTGTA+TGG + chr1_1:66402405-66402424 Msa0037410:intron 25.0%
!! TTTTTCTCTGAATTTACAAC+AGG - chr1_1:66402460-66402479 None:intergenic 25.0%
!!! ATTTTTTGTCAATATAGGTG+TGG - chr1_1:66402747-66402766 None:intergenic 25.0%
! CTAAAAGAGGATAAATTAGA+TGG - chr1_1:66402774-66402793 None:intergenic 25.0%
!! TCTTGTGAATATTCTAAAAG+AGG - chr1_1:66402787-66402806 None:intergenic 25.0%
! GAATCAAATTATCTTCTAGA+AGG - chr1_1:66403301-66403320 None:intergenic 25.0%
! AGATAATTTGATTCAGATGA+TGG + chr1_1:66403307-66403326 Msa0037410:intron 25.0%
! TTATCTGTTAGAAAGAAGAA+TGG + chr1_1:66403731-66403750 Msa0037410:intron 25.0%
! TTTCATGCATCATATCTAAA+TGG - chr1_1:66403782-66403801 None:intergenic 25.0%
!!! ATTTCTTTTTCAGTTGCTAA+GGG - chr1_1:66403936-66403955 None:intergenic 25.0%
!!! AATTTCTTTTTCAGTTGCTA+AGG - chr1_1:66403937-66403956 None:intergenic 25.0%
!!! ATAAGAGTTATTGGTTCAAA+AGG + chr1_1:66404135-66404154 Msa0037410:intron 25.0%
! ATTGAAAGATCAATGTCTTT+CGG - chr1_1:66404224-66404243 None:intergenic 25.0%
! TGAGTTAAATGCATCAAAAT+TGG - chr1_1:66404254-66404273 None:intergenic 25.0%
! ATTCCTATTACAAACATCAA+TGG + chr1_1:66404375-66404394 Msa0037410:intron 25.0%
! CTAAATAAGATAGGTTTAGA+AGG + chr1_1:66404451-66404470 Msa0037410:intron 25.0%
!! CTAAAATTTTCTTCCTTTTC+TGG + chr1_1:66404525-66404544 Msa0037410:intron 25.0%
!! AAAATTTTCTTCCTTTTCTG+GGG + chr1_1:66404527-66404546 Msa0037410:intron 25.0%
!! TTGAATTGCAGATATTTTCA+AGG + chr1_1:66404647-66404666 Msa0037410:intron 25.0%
!! TGAATTGCAGATATTTTCAA+GGG + chr1_1:66404648-66404667 Msa0037410:intron 25.0%
!!! GAAGTGATTTTTGTTTTCTT+TGG + chr1_1:66404959-66404978 Msa0037410:three_prime_UTR 25.0%
! TTTCTTTCATTTTCATTGCC+AGG + chr1_1:66400472-66400491 Msa0037410:intron 30.0%
! TTCTTTCATTTTCATTGCCA+GGG + chr1_1:66400473-66400492 Msa0037410:intron 30.0%
TTTCACACTTAATTGTTCAC+GGG + chr1_1:66400557-66400576 Msa0037410:intron 30.0%
AACCTTAAAGAAGTCAAATC+AGG - chr1_1:66400804-66400823 None:intergenic 30.0%
!!! GCTTTTGTTTTTTCTGTTCT+TGG + chr1_1:66401034-66401053 Msa0037410:intron 30.0%
!! TATGATATGGTTGGTAGATA+TGG + chr1_1:66401093-66401112 Msa0037410:intron 30.0%
!! ATGATATGGTTGGTAGATAT+GGG + chr1_1:66401094-66401113 Msa0037410:intron 30.0%
! AACACTTTTGTTGCATTTTG+TGG + chr1_1:66401281-66401300 Msa0037410:intron 30.0%
! TTTGTTGCATTTTGTGGTTT+AGG + chr1_1:66401287-66401306 Msa0037410:intron 30.0%
TTATGGTTATGACGAGAAAA+AGG + chr1_1:66401364-66401383 Msa0037410:intron 30.0%
GACATTAAAATGAATGTAGC+TGG + chr1_1:66401423-66401442 Msa0037410:intron 30.0%
CTTACAAAAAGTCAGAATCT+TGG + chr1_1:66401454-66401473 Msa0037410:intron 30.0%
TCACAACCTGACTAATTTAT+AGG - chr1_1:66401645-66401664 None:intergenic 30.0%
! ATAAATTAGTCAGGTTGTGA+AGG + chr1_1:66401645-66401664 Msa0037410:intron 30.0%
! CTAATCAACGGATAAAGTTT+TGG + chr1_1:66401675-66401694 Msa0037410:intron 30.0%
GCATTTCCATTTATATTGCT+TGG + chr1_1:66402010-66402029 Msa0037410:CDS 30.0%
GGAAACAAGATTGATATTGA+TGG + chr1_1:66402031-66402050 Msa0037410:CDS 30.0%
AACAAGATTGATATTGATGG+CGG + chr1_1:66402034-66402053 Msa0037410:CDS 30.0%
ATTAAGGAAACTTAGAAGTG+AGG - chr1_1:66402087-66402106 None:intergenic 30.0%
TGTCTAATTATCTTATGTGC+AGG + chr1_1:66402120-66402139 Msa0037410:intron 30.0%
CAAATTAAAGGTCCATACAA+TGG - chr1_1:66402420-66402439 None:intergenic 30.0%
TACGATCTTGTAAATCTCTA+TGG - chr1_1:66402639-66402658 None:intergenic 30.0%
GATCATATCTCTAATTAACG+TGG + chr1_1:66402924-66402943 Msa0037410:intron 30.0%
!! CTGGAATTCTAAGATAGTAT+TGG - chr1_1:66403098-66403117 None:intergenic 30.0%
ACTATCTTAGAATTCCAGTT+AGG + chr1_1:66403100-66403119 Msa0037410:intron 30.0%
TTGATTGTAACAAAAGGCTT+GGG - chr1_1:66403161-66403180 None:intergenic 30.0%
TTTGATTGTAACAAAAGGCT+TGG - chr1_1:66403162-66403181 None:intergenic 30.0%
CGTAGTTTGATTGTAACAAA+AGG - chr1_1:66403167-66403186 None:intergenic 30.0%
AATCAAACTACGTAGTATGT+AGG + chr1_1:66403175-66403194 Msa0037410:intron 30.0%
! AGTTTTCATTCCCATGAAAT+AGG + chr1_1:66403340-66403359 Msa0037410:intron 30.0%
TCTTCATTATCCCTATGAAA+TGG + chr1_1:66403399-66403418 Msa0037410:intron 30.0%
CTTCATTATCCCTATGAAAT+GGG + chr1_1:66403400-66403419 Msa0037410:intron 30.0%
AATTGGGAGCAAAAGAAAAT+GGG - chr1_1:66403476-66403495 None:intergenic 30.0%
AAATTGGGAGCAAAAGAAAA+TGG - chr1_1:66403477-66403496 None:intergenic 30.0%
!! GACCTATTGGTTCAAAAATT+GGG - chr1_1:66403492-66403511 None:intergenic 30.0%
!! AGACCTATTGGTTCAAAAAT+TGG - chr1_1:66403493-66403512 None:intergenic 30.0%
!!! TGTTTTAGCATGCCTATTAT+TGG + chr1_1:66403869-66403888 Msa0037410:intron 30.0%
TTGCTTTCTGTTCCAATAAT+AGG - chr1_1:66403884-66403903 None:intergenic 30.0%
!!! TTTCTTTTTCAGTTGCTAAG+GGG - chr1_1:66403935-66403954 None:intergenic 30.0%
GTATCTGCATCTAAATAGAA+AGG + chr1_1:66404339-66404358 Msa0037410:intron 30.0%
CTAAATAGAAAGGAACTGTA+AGG + chr1_1:66404349-66404368 Msa0037410:intron 30.0%
TCACCATTGATGTTTGTAAT+AGG - chr1_1:66404381-66404400 None:intergenic 30.0%
ATTACAAACATCAATGGTGA+AGG + chr1_1:66404381-66404400 Msa0037410:intron 30.0%
GAGGAGATTCTAAATAAGAT+AGG + chr1_1:66404442-66404461 Msa0037410:intron 30.0%
! AAATTTTCTTCCTTTTCTGG+GGG + chr1_1:66404528-66404547 Msa0037410:intron 30.0%
! ATTTGAAACACAGCATTGAA+GGG - chr1_1:66404760-66404779 None:intergenic 30.0%
! AATTTGAAACACAGCATTGA+AGG - chr1_1:66404761-66404780 None:intergenic 30.0%
!!! ATAGTACTATTGTTTTGGGA+AGG + chr1_1:66404867-66404886 Msa0037410:three_prime_UTR 30.0%
TCTAATTCGTGGTAAATCAA+TGG - chr1_1:66404932-66404951 None:intergenic 30.0%
TGATTTACCACGAATTAGAT+AGG + chr1_1:66404933-66404952 Msa0037410:three_prime_UTR 30.0%
GTCGGTAATCCATTATACAT+AGG + chr1_1:66400100-66400119 Msa0037410:five_prime_UTR 35.0%
CTCGAACTACCTATGTATAA+TGG - chr1_1:66400112-66400131 None:intergenic 35.0%
TCAAAAGGGGAAAAGGAAAA+GGG - chr1_1:66400189-66400208 None:intergenic 35.0%
TGTCAACTTCGAACTCAAAA+GGG - chr1_1:66400203-66400222 None:intergenic 35.0%
ATGTCAACTTCGAACTCAAA+AGG - chr1_1:66400204-66400223 None:intergenic 35.0%
! ATGAATTGTTTAGCGTTGAG+AGG - chr1_1:66400280-66400299 None:intergenic 35.0%
TGCGTGAAATTGAGCTTAAT+TGG - chr1_1:66400306-66400325 None:intergenic 35.0%
! CACCTGATTTGACTTCTTTA+AGG + chr1_1:66400799-66400818 Msa0037410:intron 35.0%
!! CTTCTTTAAGGTTGTGTTTG+AGG + chr1_1:66400811-66400830 Msa0037410:intron 35.0%
TTTAGTTAAGGGTCCACAAA+AGG - chr1_1:66400875-66400894 None:intergenic 35.0%
CAAGTTTAGTCAGCAGTATA+AGG + chr1_1:66400911-66400930 Msa0037410:CDS 35.0%
! TTGAGTGGGTTTGTATGATA+TGG + chr1_1:66401080-66401099 Msa0037410:intron 35.0%
! TTGGAGTTGCGTTTTATAGA+GGG + chr1_1:66401147-66401166 Msa0037410:CDS 35.0%
ACAATCTGATCAGTAAGAGA+TGG - chr1_1:66401858-66401877 None:intergenic 35.0%
TTATGTTCTTCTTGTGACAC+AGG + chr1_1:66401967-66401986 Msa0037410:intron 35.0%
! ACAAGATTGATATTGATGGC+GGG + chr1_1:66402035-66402054 Msa0037410:CDS 35.0%
TTTGCAGATGTCTCAAAGTA+GGG - chr1_1:66402193-66402212 None:intergenic 35.0%
! TTTTGCAGATGTCTCAAAGT+AGG - chr1_1:66402194-66402213 None:intergenic 35.0%
ACTGATATGAATTGAAGCTG+TGG + chr1_1:66402310-66402329 Msa0037410:intron 35.0%
TCTCTGAATTTACAACAGGA+TGG - chr1_1:66402456-66402475 None:intergenic 35.0%
TAACTTGAATAGTGCTCCTT+AGG + chr1_1:66402534-66402553 Msa0037410:intron 35.0%
AACTTGAATAGTGCTCCTTA+GGG + chr1_1:66402535-66402554 Msa0037410:intron 35.0%
! ATTGAGTGTTTTCAGCTTGT+GGG - chr1_1:66402576-66402595 None:intergenic 35.0%
ATAGCAGAAACAATGTGCAA+TGG - chr1_1:66402852-66402871 None:intergenic 35.0%
!!! ATCTAGTTTTCGACGTGAAA+GGG - chr1_1:66402962-66402981 None:intergenic 35.0%
CTTATCCTAGATCTGTCATA+TGG - chr1_1:66403073-66403092 None:intergenic 35.0%
CAGTATCTATTGAAAGTCTG+CGG + chr1_1:66403220-66403239 Msa0037410:intron 35.0%
AAGTGCCTCAAAATTAATGC+TGG + chr1_1:66403425-66403444 Msa0037410:intron 35.0%
! ACTCACCAGCATTAATTTTG+AGG - chr1_1:66403433-66403452 None:intergenic 35.0%
! CTCCCAATTTTTGAACCAAT+AGG + chr1_1:66403487-66403506 Msa0037410:intron 35.0%
TTTGAGTAAGACAGACCTAT+TGG - chr1_1:66403505-66403524 None:intergenic 35.0%
AATAGGTCTGTCTTACTCAA+AGG + chr1_1:66403504-66403523 Msa0037410:intron 35.0%
ATAGGTCTGTCTTACTCAAA+GGG + chr1_1:66403505-66403524 Msa0037410:intron 35.0%
TATAATTTCATCCCAACTCC+AGG - chr1_1:66403677-66403696 None:intergenic 35.0%
GAGTTGGGATGAAATTATAC+AGG + chr1_1:66403678-66403697 Msa0037410:intron 35.0%
GAAGAATGGAAGTTAGTTCA+CGG + chr1_1:66403745-66403764 Msa0037410:intron 35.0%
AAGAATGGAAGTTAGTTCAC+GGG + chr1_1:66403746-66403765 Msa0037410:intron 35.0%
TCTACCTAATGAGTGATTGA+CGG + chr1_1:66403956-66403975 Msa0037410:intron 35.0%
! TCAACTTGCTTTGTTGATGT+GGG - chr1_1:66404026-66404045 None:intergenic 35.0%
! TTCAACTTGCTTTGTTGATG+TGG - chr1_1:66404027-66404046 None:intergenic 35.0%
! TGCAATCCAACTTGTAGTTT+TGG + chr1_1:66404050-66404069 Msa0037410:intron 35.0%
!!! ATCCAACTTGTAGTTTTGGT+TGG + chr1_1:66404054-66404073 Msa0037410:intron 35.0%
!!! TCCAACTTGTAGTTTTGGTT+GGG + chr1_1:66404055-66404074 Msa0037410:intron 35.0%
! GGTTGGGTTAAACAAGTTTT+TGG + chr1_1:66404071-66404090 Msa0037410:intron 35.0%
TTCATAGACTTCACTTGAGA+CGG - chr1_1:66404111-66404130 None:intergenic 35.0%
TTCAAAAGGTTAGAGTGCAT+GGG + chr1_1:66404149-66404168 Msa0037410:intron 35.0%
AAAAGTTGGCAAATGCCATA+TGG + chr1_1:66404172-66404191 Msa0037410:intron 35.0%
AAAGTTGGCAAATGCCATAT+GGG + chr1_1:66404173-66404192 Msa0037410:intron 35.0%
GATGCAGATACCTTTCAAAT+AGG - chr1_1:66404330-66404349 None:intergenic 35.0%
AATCTGTTCTTTCATGTTGC+TGG - chr1_1:66404422-66404441 None:intergenic 35.0%
CAACATGAAAGAACAGATTG+AGG + chr1_1:66404423-66404442 Msa0037410:intron 35.0%
! AATTTTCTTCCTTTTCTGGG+GGG + chr1_1:66404529-66404548 Msa0037410:intron 35.0%
GATGCATGTACTAAGATTTG+AGG - chr1_1:66404555-66404574 None:intergenic 35.0%
!! ATATTTTCAAGGGATTCCTG+AGG + chr1_1:66404658-66404677 Msa0037410:CDS 35.0%
!! TGGAAGTACTGAATAATTGC+AGG + chr1_1:66404730-66404749 Msa0037410:three_prime_UTR 35.0%
ACAATTTACCCACACAATCA+TGG - chr1_1:66404825-66404844 None:intergenic 35.0%
CTATCAAAAAGGGAACATCA+AGG - chr1_1:66404851-66404870 None:intergenic 35.0%
! TTGGTGTTCAAATTGAGATG+TGG + chr1_1:66404978-66404997 Msa0037410:three_prime_UTR 35.0%
TGCTGAGTACATCATTCAAA+TGG - chr1_1:66405021-66405040 None:intergenic 35.0%
CTCAAAAGGGGAAAAGGAAA+AGG - chr1_1:66400190-66400209 None:intergenic 40.0%
TTCGAACTCAAAAGGGGAAA+AGG - chr1_1:66400196-66400215 None:intergenic 40.0%
GTCAACTTCGAACTCAAAAG+GGG - chr1_1:66400202-66400221 None:intergenic 40.0%
TTGCTCAAGGTCATTGTTCT+CGG + chr1_1:66400365-66400384 Msa0037410:CDS 40.0%
!! AAATACGGTGTTGCAGAGAA+AGG - chr1_1:66400418-66400437 None:intergenic 40.0%
! TTCATTTTCATTGCCAGGGT+TGG + chr1_1:66400477-66400496 Msa0037410:intron 40.0%
!! AGGATACTGATTCATCAAGG+AGG - chr1_1:66400508-66400527 None:intergenic 40.0%
!! ACGAGGATACTGATTCATCA+AGG - chr1_1:66400511-66400530 None:intergenic 40.0%
AACAAACGGGTAAGAAACCA+AGG - chr1_1:66400535-66400554 None:intergenic 40.0%
CAAAAGGCTAAATCCCCATA+AGG - chr1_1:66400859-66400878 None:intergenic 40.0%
!! TATGGGGATTTAGCCTTTTG+TGG + chr1_1:66400859-66400878 Msa0037410:intron 40.0%
CAGCAGTATAAGGCAACAAT+TGG + chr1_1:66400921-66400940 Msa0037410:CDS 40.0%
GTGGGTTTGTATGATATGGT+TGG + chr1_1:66401084-66401103 Msa0037410:intron 40.0%
CAAGAGAGATTCCAAAGTCT+TGG + chr1_1:66401128-66401147 Msa0037410:CDS 40.0%
AAAACGCAACTCCAAGACTT+TGG - chr1_1:66401142-66401161 None:intergenic 40.0%
! CTTGGAGTTGCGTTTTATAG+AGG + chr1_1:66401146-66401165 Msa0037410:CDS 40.0%
! TGGAGTTGCGTTTTATAGAG+GGG + chr1_1:66401148-66401167 Msa0037410:CDS 40.0%
CGTTTGATTCACTTGACAAC+TGG + chr1_1:66401213-66401232 Msa0037410:CDS 40.0%
ACTTGTAGTTGAGACTTGAG+AGG + chr1_1:66401588-66401607 Msa0037410:intron 40.0%
CTTGTAGTTGAGACTTGAGA+GGG + chr1_1:66401589-66401608 Msa0037410:intron 40.0%
AGGGACGCAATGTGATAATT+TGG + chr1_1:66401608-66401627 Msa0037410:intron 40.0%
! AATTAGTCAGGTTGTGAAGG+AGG + chr1_1:66401648-66401667 Msa0037410:intron 40.0%
! ATTAGTCAGGTTGTGAAGGA+GGG + chr1_1:66401649-66401668 Msa0037410:intron 40.0%
!! GAAGGAGGGTATCTAATCAA+CGG + chr1_1:66401663-66401682 Msa0037410:intron 40.0%
TACATCTGCCAATGCACAAA+TGG - chr1_1:66401702-66401721 None:intergenic 40.0%
AGAACACTGCTGATGTTTGA+GGG - chr1_1:66401727-66401746 None:intergenic 40.0%
TAGAACACTGCTGATGTTTG+AGG - chr1_1:66401728-66401747 None:intergenic 40.0%
! AGAGATGGAGCATTATCACA+AGG - chr1_1:66401843-66401862 None:intergenic 40.0%
!! TGATTAGCCTTCCAACTTAC+TGG + chr1_1:66401919-66401938 Msa0037410:intron 40.0%
AATGGAAATGCCCTTGTATC+AGG - chr1_1:66402001-66402020 None:intergenic 40.0%
! GGTTTCTGAGAAGAAAGCAA+AGG + chr1_1:66402141-66402160 Msa0037410:intron 40.0%
!! CTTTGAGACATCTGCAAAAG+AGG + chr1_1:66402195-66402214 Msa0037410:CDS 40.0%
! CATTGAGTGTTTTCAGCTTG+TGG - chr1_1:66402577-66402596 None:intergenic 40.0%
AGTGAACATATCAGTGACTG+AGG - chr1_1:66402616-66402635 None:intergenic 40.0%
!!! GATCTAGTTTTCGACGTGAA+AGG - chr1_1:66402963-66402982 None:intergenic 40.0%
!! GACATGAGGGTGTTGTAATT+GGG - chr1_1:66403012-66403031 None:intergenic 40.0%
!! AGACATGAGGGTGTTGTAAT+TGG - chr1_1:66403013-66403032 None:intergenic 40.0%
ATTACAACACCCTCATGTCT+AGG + chr1_1:66403013-66403032 Msa0037410:intron 40.0%
ATGTCTAGTCCTAGACATGA+GGG - chr1_1:66403025-66403044 None:intergenic 40.0%
TGTGACCATATGACAGATCT+AGG + chr1_1:66403065-66403084 Msa0037410:intron 40.0%
ACTACGTAGTATGTAGGAAG+AGG + chr1_1:66403181-66403200 Msa0037410:intron 40.0%
ATTGAAAGTCTGCGGTAATG+TGG + chr1_1:66403228-66403247 Msa0037410:intron 40.0%
TTGAAAGTCTGCGGTAATGT+GGG + chr1_1:66403229-66403248 Msa0037410:intron 40.0%
AGGCACTTGACCTATTTCAT+GGG - chr1_1:66403353-66403372 None:intergenic 40.0%
GGCACTTAACCCATTTCATA+GGG - chr1_1:66403412-66403431 None:intergenic 40.0%
AGGCACTTAACCCATTTCAT+AGG - chr1_1:66403413-66403432 None:intergenic 40.0%
GGGAAAATGTGACAAAAGCA+AGG - chr1_1:66403456-66403475 None:intergenic 40.0%
AAGACAATAGATGCTTAGCC+TGG + chr1_1:66403656-66403675 Msa0037410:intron 40.0%
TTGGAACAGAAAGCAAGCTT+TGG + chr1_1:66403888-66403907 Msa0037410:intron 40.0%
TGGAACAGAAAGCAAGCTTT+GGG + chr1_1:66403889-66403908 Msa0037410:intron 40.0%
TATAGCATGCCTATTGTGGT+AGG - chr1_1:66403986-66404005 None:intergenic 40.0%
CTAGTATAGCATGCCTATTG+TGG - chr1_1:66403990-66404009 None:intergenic 40.0%
CACAATAGGCATGCTATACT+AGG + chr1_1:66403988-66404007 Msa0037410:intron 40.0%
ATAGGCATGCTATACTAGGA+TGG + chr1_1:66403992-66404011 Msa0037410:intron 40.0%
ACCCAACCAAAACTACAAGT+TGG - chr1_1:66404059-66404078 None:intergenic 40.0%
GTTCAAAAGGTTAGAGTGCA+TGG + chr1_1:66404148-66404167 Msa0037410:intron 40.0%
TTAGAGTGCATGGGAAAAGT+TGG + chr1_1:66404158-66404177 Msa0037410:intron 40.0%
AAGTTGGCAAATGCCATATG+GGG + chr1_1:66404174-66404193 Msa0037410:intron 40.0%
ACTGTATGCCATGATTGTGT+GGG + chr1_1:66404814-66404833 Msa0037410:three_prime_UTR 40.0%
TTGAGAATGTTGCACTCCTA+GGG + chr1_1:66404896-66404915 Msa0037410:three_prime_UTR 40.0%
! CAATGGAACATGTTTTCCCT+AGG - chr1_1:66404915-66404934 None:intergenic 40.0%
CTTCAAGCCTATCTAATTCG+TGG - chr1_1:66404943-66404962 None:intergenic 40.0%
CAGTGCTTCACATAGTTGAA+TGG + chr1_1:66405055-66405074 Msa0037410:three_prime_UTR 40.0%
ATGACATAGCTGGTTACGGT+GGG - chr1_1:66400331-66400350 None:intergenic 45.0%
AATGACATAGCTGGTTACGG+TGG - chr1_1:66400332-66400351 None:intergenic 45.0%
CGCAATGACATAGCTGGTTA+CGG - chr1_1:66400335-66400354 None:intergenic 45.0%
GAGAACAATGACCTTGAGCA+AGG - chr1_1:66400366-66400385 None:intergenic 45.0%
TGCAGAGAAAGGAGGGAAAA+AGG - chr1_1:66400407-66400426 None:intergenic 45.0%
GAATCAGTATCCTCGTTCCT+TGG + chr1_1:66400515-66400534 Msa0037410:intron 45.0%
AGACTCGTCACACTACAAGT+GGG + chr1_1:66400981-66401000 Msa0037410:intron 45.0%
! AGTTGCGTTTTATAGAGGGG+CGG + chr1_1:66401151-66401170 Msa0037410:CDS 45.0%
CGTATGATGTGAACGTCATG+AGG + chr1_1:66401189-66401208 Msa0037410:CDS 45.0%
!! GTTTTGGGCCATTTGTGCAT+TGG + chr1_1:66401691-66401710 Msa0037410:intron 45.0%
! GACAAGTCCAGTAAGTTGGA+AGG - chr1_1:66401929-66401948 None:intergenic 45.0%
GTGAGACAAGTCCAGTAAGT+TGG - chr1_1:66401933-66401952 None:intergenic 45.0%
GAAATGCCCTTGTATCAGGA+GGG - chr1_1:66401997-66402016 None:intergenic 45.0%
CTGAGAAGAAAGCAAAGGAC+TGG + chr1_1:66402146-66402165 Msa0037410:CDS 45.0%
! AAGGACTGGTGTGCTTCAAA+AGG + chr1_1:66402160-66402179 Msa0037410:CDS 45.0%
! AGGACTGGTGTGCTTCAAAA+GGG + chr1_1:66402161-66402180 Msa0037410:CDS 45.0%
GATGTCTAGTCCTAGACATG+AGG - chr1_1:66403026-66403045 None:intergenic 45.0%
CGTAGTATGTAGGAAGAGGA+TGG + chr1_1:66403185-66403204 Msa0037410:intron 45.0%
! GAGGCACTTGACCTATTTCA+TGG - chr1_1:66403354-66403373 None:intergenic 45.0%
!!! CACCAAACCTTTTGAAGCAG+CGG + chr1_1:66403602-66403621 Msa0037410:intron 45.0%
ATCCGCTGCTTCAAAAGGTT+TGG - chr1_1:66403607-66403626 None:intergenic 45.0%
TGTGAATCCGCTGCTTCAAA+AGG - chr1_1:66403612-66403631 None:intergenic 45.0%
GCGGATTCACATGAAAATGC+TGG + chr1_1:66403621-66403640 Msa0037410:intron 45.0%
ATAGATGCTTAGCCTGGAGT+TGG + chr1_1:66403662-66403681 Msa0037410:intron 45.0%
TAGATGCTTAGCCTGGAGTT+GGG + chr1_1:66403663-66403682 Msa0037410:intron 45.0%
GGAACAGAAAGCAAGCTTTG+GGG + chr1_1:66403890-66403909 Msa0037410:intron 45.0%
! GAACAGAAAGCAAGCTTTGG+GGG + chr1_1:66403891-66403910 Msa0037410:intron 45.0%
!! AACAGAAAGCAAGCTTTGGG+GGG + chr1_1:66403892-66403911 Msa0037410:intron 45.0%
CAGTTGCTAAGGGGAAAGTA+AGG - chr1_1:66403926-66403945 None:intergenic 45.0%
TTGGCCGTCAATCACTCATT+AGG - chr1_1:66403963-66403982 None:intergenic 45.0%
CAAATGCCATATGGGGACTT+GGG + chr1_1:66404181-66404200 Msa0037410:intron 45.0%
AAATGCCATATGGGGACTTG+GGG + chr1_1:66404182-66404201 Msa0037410:intron 45.0%
GGTGAAGGAGTTCTCTAAAC+TGG + chr1_1:66404396-66404415 Msa0037410:intron 45.0%
!! TTTTCAAGGGATTCCTGAGG+CGG + chr1_1:66404661-66404680 Msa0037410:CDS 45.0%
CACTGTATGCCATGATTGTG+TGG + chr1_1:66404813-66404832 Msa0037410:three_prime_UTR 45.0%
CTTGAGAATGTTGCACTCCT+AGG + chr1_1:66404895-66404914 Msa0037410:three_prime_UTR 45.0%
TGACATAGCTGGTTACGGTG+GGG - chr1_1:66400330-66400349 None:intergenic 50.0%
GTCATTGTTCTCGGCGATAG+CGG + chr1_1:66400374-66400393 Msa0037410:CDS 50.0%
TCATTGTTCTCGGCGATAGC+GGG + chr1_1:66400375-66400394 Msa0037410:CDS 50.0%
!! ACGGTGTTGCAGAGAAAGGA+GGG - chr1_1:66400414-66400433 None:intergenic 50.0%
!! TACGGTGTTGCAGAGAAAGG+AGG - chr1_1:66400415-66400434 None:intergenic 50.0%
! CAAGGAGGTTTTTCCAACCC+TGG - chr1_1:66400493-66400512 None:intergenic 50.0%
GGGTAAGAAACCAAGGAACG+AGG - chr1_1:66400528-66400547 None:intergenic 50.0%
CAGACTCGTCACACTACAAG+TGG + chr1_1:66400980-66400999 Msa0037410:intron 50.0%
TGGTAGATATGGGACACTGC+TGG + chr1_1:66401104-66401123 Msa0037410:intron 50.0%
TTCACTTGACAACTGGCACG+AGG + chr1_1:66401220-66401239 Msa0037410:CDS 50.0%
GCACGAGGAGTTTCTCAAAC+AGG + chr1_1:66401235-66401254 Msa0037410:CDS 50.0%
AGGCAAACCCTCCTGATACA+AGG + chr1_1:66401987-66402006 Msa0037410:intron 50.0%
GGCAAACCCTCCTGATACAA+GGG + chr1_1:66401988-66402007 Msa0037410:intron 50.0%
GGAAATGCCCTTGTATCAGG+AGG - chr1_1:66401998-66402017 None:intergenic 50.0%
GTGTATTGCAAAGACTGCCC+TGG + chr1_1:66402243-66402262 Msa0037410:CDS 50.0%
CATGTCCTGTTCACGCTCAT+TGG - chr1_1:66402269-66402288 None:intergenic 50.0%
CTGAACAGGGATCTTCCCTA+AGG - chr1_1:66402553-66402572 None:intergenic 50.0%
! TTCAGCTTGTGGGCTGAACA+GGG - chr1_1:66402566-66402585 None:intergenic 50.0%
! TTTCAGCTTGTGGGCTGAAC+AGG - chr1_1:66402567-66402586 None:intergenic 50.0%
! TCTAGAACGTGATCGAACGC+AGG + chr1_1:66402983-66403002 Msa0037410:intron 50.0%
AGGACTAGACATCTCGAGTG+TGG + chr1_1:66403033-66403052 Msa0037410:intron 50.0%
TCAGCCTGTAGCTCAAGATG+CGG + chr1_1:66403129-66403148 Msa0037410:intron 50.0%
TCTACGTCAACCTAGCCCAA+AGG + chr1_1:66403802-66403821 Msa0037410:intron 50.0%
TCATCGACCAACCCTCCTTT+GGG - chr1_1:66403820-66403839 None:intergenic 50.0%
TTCATCGACCAACCCTCCTT+TGG - chr1_1:66403821-66403840 None:intergenic 50.0%
GCATGCCTATTGTGGTAGGT+TGG - chr1_1:66403982-66404001 None:intergenic 50.0%
GCAAATGCCATATGGGGACT+TGG + chr1_1:66404180-66404199 Msa0037410:intron 50.0%
GTTCCAGAGAGTGAGCAAAG+TGG + chr1_1:66404683-66404702 Msa0037410:CDS 50.0%
GGTGGATGTGCATGCTGATA+TGG + chr1_1:66404710-66404729 Msa0037410:exon 50.0%
CGTCTGCGCAATGACATAGC+TGG - chr1_1:66400341-66400360 None:intergenic 55.0%
!! TGATGGCGGGAATAGTCGAG+TGG + chr1_1:66402048-66402067 Msa0037410:CDS 55.0%
CTGTTCACGCTCATTGGCCA+GGG - chr1_1:66402263-66402282 None:intergenic 55.0%
CAGGCTGAGCAAGACCTAAC+TGG - chr1_1:66403117-66403136 None:intergenic 55.0%
CAGCCTGTAGCTCAAGATGC+GGG + chr1_1:66403130-66403149 Msa0037410:intron 55.0%
AGCCTGTAGCTCAAGATGCG+GGG + chr1_1:66403131-66403150 Msa0037410:intron 55.0%
ACGTCAACCTAGCCCAAAGG+AGG + chr1_1:66403805-66403824 Msa0037410:intron 55.0%
CGTCAACCTAGCCCAAAGGA+GGG + chr1_1:66403806-66403825 Msa0037410:intron 55.0%
AACCTAGCCCAAAGGAGGGT+TGG + chr1_1:66403810-66403829 Msa0037410:intron 55.0%
!! GAAAGCAAGCTTTGGGGGGT+TGG + chr1_1:66403896-66403915 Msa0037410:intron 55.0%
GACGGCCAACCTACCACAAT+AGG + chr1_1:66403974-66403993 Msa0037410:intron 55.0%
! GATTTGAGGCCCCCCAGAAA+AGG - chr1_1:66404541-66404560 None:intergenic 55.0%
CCACCACTTTGCTCACTCTC+TGG - chr1_1:66404689-66404708 None:intergenic 55.0%
CCAGAGAGTGAGCAAAGTGG+TGG + chr1_1:66404686-66404705 Msa0037410:CDS 55.0%
GAGAGTGAGCAAAGTGGTGG+TGG + chr1_1:66404689-66404708 Msa0037410:CDS 55.0%
!! AGTGAGCAAAGTGGTGGTGG+TGG + chr1_1:66404692-66404711 Msa0037410:CDS 55.0%
GCGCAGACGAACCTTGCTCA+AGG + chr1_1:66400352-66400371 Msa0037410:CDS 60.0%
CCTGTTCACGCTCATTGGCC+AGG - chr1_1:66402264-66402283 None:intergenic 60.0%
CCTGGCCAATGAGCGTGAAC+AGG + chr1_1:66402261-66402280 Msa0037410:CDS 60.0%
GCCTGTAGCTCAAGATGCGG+GGG + chr1_1:66403132-66403151 Msa0037410:intron 60.0%
ACCCCCGCATCTTGAGCTAC+AGG - chr1_1:66403136-66403155 None:intergenic 60.0%
GACCAACCCTCCTTTGGGCT+AGG - chr1_1:66403815-66403834 None:intergenic 60.0%
TGCCATATGGGGACTTGGGG+AGG + chr1_1:66404185-66404204 Msa0037410:intron 60.0%
AGCCTCCCCAAGTCCCCATA+TGG - chr1_1:66404190-66404209 None:intergenic 60.0%
!! TCACTCTCTGGAACCGCCTC+AGG - chr1_1:66404677-66404696 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 66399980 66405121 66399980 ID=Msa0037410;Name=Msa0037410
chr1_1 mRNA 66399980 66405121 66399980 ID=Msa0037410-mRNA-1;Parent=Msa0037410;Name=Msa0037410-mRNA-1;_AED=0.17;_eAED=0.17;_QI=364|0.8|1|1|1|1|6|394|198
chr1_1 exon 66399980 66400396 66399980 ID=Msa0037410-mRNA-1:exon:21488;Parent=Msa0037410-mRNA-1
chr1_1 exon 66400899 66400998 66400899 ID=Msa0037410-mRNA-1:exon:21489;Parent=Msa0037410-mRNA-1
chr1_1 exon 66401110 66401256 66401110 ID=Msa0037410-mRNA-1:exon:21490;Parent=Msa0037410-mRNA-1
chr1_1 exon 66401989 66402069 66401989 ID=Msa0037410-mRNA-1:exon:21491;Parent=Msa0037410-mRNA-1
chr1_1 exon 66402142 66402287 66402142 ID=Msa0037410-mRNA-1:exon:21492;Parent=Msa0037410-mRNA-1
chr1_1 exon 66404658 66405121 66404658 ID=Msa0037410-mRNA-1:exon:21493;Parent=Msa0037410-mRNA-1
chr1_1 five_prime_UTR 66399980 66400343 66399980 ID=Msa0037410-mRNA-1:five_prime_utr;Parent=Msa0037410-mRNA-1
chr1_1 CDS 66400344 66400396 66400344 ID=Msa0037410-mRNA-1:cds;Parent=Msa0037410-mRNA-1
chr1_1 CDS 66400899 66400998 66400899 ID=Msa0037410-mRNA-1:cds;Parent=Msa0037410-mRNA-1
chr1_1 CDS 66401110 66401256 66401110 ID=Msa0037410-mRNA-1:cds;Parent=Msa0037410-mRNA-1
chr1_1 CDS 66401989 66402069 66401989 ID=Msa0037410-mRNA-1:cds;Parent=Msa0037410-mRNA-1
chr1_1 CDS 66402142 66402287 66402142 ID=Msa0037410-mRNA-1:cds;Parent=Msa0037410-mRNA-1
chr1_1 CDS 66404658 66404727 66404658 ID=Msa0037410-mRNA-1:cds;Parent=Msa0037410-mRNA-1
chr1_1 three_prime_UTR 66404728 66405121 66404728 ID=Msa0037410-mRNA-1:three_prime_utr;Parent=Msa0037410-mRNA-1
Gene Sequence

>Msa0037410

ATGTCATTGCGCAGACGAACCTTGCTCAAGGTCATTGTTCTCGGCGATAGCGGATATGTGCACAACAAGTTTAGTCAGCAGTATAAGGCAACAATTGGTGCTGATTTTGTCACTAAAGAACTTCAAATTGACGACAGACTCGTCACACTACAAATATGGGACACTGCTGGACAAGAGAGATTCCAAAGTCTTGGAGTTGCGTTTTATAGAGGGGCGGATTGCTGTGTTCTTGCGTATGATGTGAACGTCATGAGGTCGTTTGATTCACTTGACAACTGGCACGAGGAGTTTCTCAAACAGGCAAACCCTCCTGATACAAGGGCATTTCCATTTATATTGCTTGGAAACAAGATTGATATTGATGGCGGGAATAGTCGAGTGGTTTCTGAGAAGAAAGCAAAGGACTGGTGTGCTTCAAAAGGGAATATTCCCTACTTTGAGACATCTGCAAAAGAGGATTACAATGTTGATGCTGCATTCTTGTGTATTGCAAAGACTGCCCTGGCCAATGAGCGTGAACAGGACATATATTTTCAAGGGATTCCTGAGGCGGTTCCAGAGAGTGAGCAAAGTGGTGGTGGTGGATGTGCATGCTGA
Protein sequence

>Msa0037410

MSLRRRTLLKVIVLGDSGYVHNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMRSFDSLDNWHEEFLKQANPPDTRAFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANEREQDIYFQGIPEAVPESEQSGGGGCAC*