AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0196130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0196130 MtrunA17_Chr2g0287731 97.150 386 5 3 1 380 1 386 0.0 754
Msa0196130 MtrunA17_Chr4g0065661 72.868 258 65 3 124 379 103 357 1.15e-136 394
Msa0196130 MtrunA17_Chr1g0181351 43.567 342 163 7 40 375 25 342 1.46e-84 261
Msa0196130 MtrunA17_Chr7g0264071 47.656 256 104 4 124 379 103 328 4.95e-78 243
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0196130 AT5G19080.1 59.283 307 97 8 91 379 79 375 1.73e-117 346
Msa0196130 AT3G06140.1 53.693 352 132 8 34 379 30 356 4.11e-106 317
Msa0196130 AT3G09770.1 49.455 275 128 5 106 375 101 369 1.39e-86 268
Msa0196130 AT3G53410.1 46.290 283 140 5 98 379 26 297 9.89e-81 249
Msa0196130 AT5G03200.1 48.289 263 120 4 111 373 87 333 1.37e-74 235
Msa0196130 AT3G09770.2 46.721 244 119 5 106 344 101 338 4.64e-66 213

Find 167 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAATTTGTCTATAATT+TGG 0.138857 2_1:+13176965 Msa0196130:three_prime_UTR
CTGGCCAACTCCTTTCTTAA+AGG 0.165355 2_1:-13175505 None:intergenic
CTGAAGGCTGAGCAAATTTC+TGG 0.188908 2_1:-13175524 None:intergenic
TGGGGCTGTGGTTGAGGTTG+GGG 0.204184 2_1:-13170411 None:intergenic
AGTGGTGGTGGTTGTGGTGG+TGG 0.206257 2_1:-13170157 None:intergenic
ACGGCATATAGGGCATTTAT+TGG 0.230340 2_1:-13176754 None:intergenic
CCTTACTGCAGACATGTAAA+AGG 0.242471 2_1:-13176907 None:intergenic
GCAGCAGCAGGAGCGTAAAA+AGG 0.256123 2_1:-13170564 None:intergenic
AATACGATTGGTAGTAGAAT+TGG 0.267852 2_1:-13170472 None:intergenic
CAGAAATTTGCTCAGCCTTC+AGG 0.272025 2_1:+13175525 Msa0196130:CDS
GGGGCTGTGGTTGAGGTTGG+GGG 0.272540 2_1:-13170410 None:intergenic
TCCCTTGTTCGGTGAACATT+AGG 0.272828 2_1:-13177110 None:intergenic
ATGGGGCTGTGGTTGAGGTT+GGG 0.273790 2_1:-13170412 None:intergenic
TTACAAACAAAGAATTTCTA+AGG 0.281637 2_1:-13176870 None:intergenic
TTGGGAGGATAGTTATTGTT+AGG 0.287510 2_1:-13170453 None:intergenic
CAATAATTTGTCTATAATTT+GGG 0.288444 2_1:+13176966 Msa0196130:three_prime_UTR
AGTTGTGGTGGTTGTGGAGG+TGG 0.300822 2_1:-13170276 None:intergenic
GGTGGTGGTGGCGGTGGTGG+TGG 0.305078 2_1:-13170300 None:intergenic
GATGGGAGTGGTGGTGGTTG+TGG 0.329259 2_1:-13170163 None:intergenic
TGAGGTGGTGGTGGAGGTGG+AGG 0.329529 2_1:-13170348 None:intergenic
GGTGGAAGTTGTGGTGGTTG+TGG 0.336374 2_1:-13170282 None:intergenic
AATGGGGCTGTGGTTGAGGT+TGG 0.339703 2_1:-13170413 None:intergenic
TTCTTAAAGGGGACTTTGAC+TGG 0.344717 2_1:-13175492 None:intergenic
CAATTGGCTGACGGCATATA+GGG 0.347981 2_1:-13176764 None:intergenic
CCTTGTTTGCTTCCCTTGTT+CGG 0.352364 2_1:-13177121 None:intergenic
TGTTGAGGTGGTGGTGGAGG+TGG 0.354310 2_1:-13170351 None:intergenic
GTTGTGGTGGTTGTGGAGGT+GGG 0.354321 2_1:-13170275 None:intergenic
TCAATTGGCTGACGGCATAT+AGG 0.355159 2_1:-13176765 None:intergenic
TGGCCAACTCCTTTCTTAAA+GGG 0.357604 2_1:-13175504 None:intergenic
TAAGGTGGTGGTGGCGGTGG+TGG 0.361132 2_1:-13170303 None:intergenic
TTTGCTCAGCCTTCAGGAAC+AGG 0.362178 2_1:+13175531 Msa0196130:CDS
GGCTTTGATGACAGTGATCC+TGG 0.364670 2_1:+13175846 Msa0196130:CDS
CTTTGTTGAGGTGGTGGTGG+AGG 0.366121 2_1:-13170354 None:intergenic
TACGTGTTTGAGGGAAGATT+TGG 0.366507 2_1:+13176993 Msa0196130:three_prime_UTR
GGGCTGTGGTTGAGGTTGGG+GGG 0.370014 2_1:-13170409 None:intergenic
TCAACCTTATCACACTCAAA+TGG 0.371823 2_1:+13170209 Msa0196130:exon
GTGGTGGTGGTTGTGGTGGT+GGG 0.376307 2_1:-13170156 None:intergenic
AGGATAGTTATTGTTAGGGT+TGG 0.378115 2_1:-13170448 None:intergenic
TCAGCCAATTGAGGAACTTA+TGG 0.388032 2_1:+13176776 Msa0196130:CDS
TTAAGAGAACTATATGGAAT+AGG 0.390290 2_1:+13175807 Msa0196130:CDS
GTCTGCAGTAAGGTAATATA+TGG 0.391862 2_1:+13176917 Msa0196130:three_prime_UTR
TTGACTACAGTTAACAGAAA+AGG 0.392889 2_1:-13176946 None:intergenic
GCAAATTACTCAAGCTGTCT+TGG 0.394705 2_1:+13175707 Msa0196130:CDS
AAACAATGTTAATGTTCATA+AGG 0.399525 2_1:+13170638 Msa0196130:CDS
CCCTTGTTCGGTGAACATTA+GGG 0.408798 2_1:-13177109 None:intergenic
TTGAGGAACTTATGGAGATC+AGG 0.413330 2_1:+13176784 Msa0196130:CDS
ATACGATTGGTAGTAGAATT+GGG 0.424103 2_1:-13170471 None:intergenic
GGTAAGACAGCTGTATCCTT+TGG 0.424454 2_1:-13175897 None:intergenic
AAAGAAACAAGGTAATGATC+AGG 0.424687 2_1:-13170693 None:intergenic
GCAGTTTGATGATCAACATA+AGG 0.425772 2_1:-13170603 None:intergenic
TAACTTTGTTGAGGTGGTGG+TGG 0.426451 2_1:-13170357 None:intergenic
TATGAGTTAAGAGAACTATA+TGG 0.428547 2_1:+13175801 Msa0196130:CDS
AATGAATGGGGCTGTGGTTG+AGG 0.432432 2_1:-13170417 None:intergenic
TGACTACAGTTAACAGAAAA+GGG 0.436276 2_1:-13176945 None:intergenic
TGGGAGGATAGTTATTGTTA+GGG 0.438633 2_1:-13170452 None:intergenic
CGAAGGAAGAAGATAAATGT+AGG 0.439842 2_1:+13175439 Msa0196130:CDS
TGTCTTACCTTGTCGACATA+TGG 0.443782 2_1:+13175911 Msa0196130:CDS
AATATGCGCTGAAACATGTT+TGG 0.444189 2_1:+13175626 Msa0196130:CDS
GAGGTGGTGGTGGAGGTGGA+GGG 0.445106 2_1:-13170347 None:intergenic
TAGTAAGGTGGTGGTGGCGG+TGG 0.449369 2_1:-13170306 None:intergenic
GGGAGTGGTGGTGGTTGTGG+TGG 0.449443 2_1:-13170160 None:intergenic
ATCTCCATAAGTTCCTCAAT+TGG 0.455073 2_1:-13176780 None:intergenic
GGCGGTGGTGGTGGAAGTTG+TGG 0.458515 2_1:-13170291 None:intergenic
TTTGGGTGCGTACGTGTTTG+AGG 0.459978 2_1:+13176983 Msa0196130:three_prime_UTR
CAACCTTATCACACTCAAAT+GGG 0.468509 2_1:+13170210 Msa0196130:exon
AGACAGATTCTGTGGATTGA+TGG 0.470345 2_1:+13175771 Msa0196130:CDS
CTTACTGCAGACATGTAAAA+GGG 0.472787 2_1:-13176906 None:intergenic
GGGGTGTAAGGAGTAGTTGA+GGG 0.474874 2_1:-13170390 None:intergenic
GGAAGTTGTGGTGGTTGTGG+AGG 0.475161 2_1:-13170279 None:intergenic
GCATCTAGCACGGAATCATC+AGG 0.477136 2_1:-13175672 None:intergenic
CCGAACAAGGGAAGCAAACA+AGG 0.483246 2_1:+13177121 Msa0196130:three_prime_UTR
TCCCTAATGTTCACCGAACA+AGG 0.486532 2_1:+13177108 Msa0196130:three_prime_UTR
GGTTGGAGAAGTAGAATGAA+TGG 0.487810 2_1:-13170431 None:intergenic
ATACCCATTTGAGTGTGATA+AGG 0.490658 2_1:-13170213 None:intergenic
CCGTGTCATCTATACTGTAT+AGG 0.492595 2_1:+13177050 Msa0196130:three_prime_UTR
GTTGGAGAAGTAGAATGAAT+GGG 0.498547 2_1:-13170430 None:intergenic
CATATTACACACTCCTTCCC+AGG 0.500384 2_1:-13175864 None:intergenic
TAGTAGTAACTTTGTTGAGG+TGG 0.501465 2_1:-13170363 None:intergenic
TAATAGTAAGGTGGTGGTGG+CGG 0.503251 2_1:-13170309 None:intergenic
TAGTAACTTTGTTGAGGTGG+TGG 0.505643 2_1:-13170360 None:intergenic
TTGGGTGCGTACGTGTTTGA+GGG 0.507585 2_1:+13176984 Msa0196130:three_prime_UTR
AAGAGGAAAGACATCTTCCC+CGG 0.508656 2_1:-13175601 None:intergenic
GGGTGTAAGGAGTAGTTGAG+GGG 0.509446 2_1:-13170389 None:intergenic
AAATATAATGACACCTGGCT+TGG 0.510867 2_1:+13177147 Msa0196130:three_prime_UTR
TGTTCTGTTGAGTAATAGTA+AGG 0.512362 2_1:-13170321 None:intergenic
GTCCCCTTTAAGAAAGGAGT+TGG 0.514493 2_1:+13175501 Msa0196130:CDS
TTACAAACACGAATTCAATA+CGG 0.515356 2_1:-13177171 None:intergenic
GTCAAAGTCCCCTTTAAGAA+AGG 0.515621 2_1:+13175495 Msa0196130:CDS
TTGACTGGCACAAATGCATC+AGG 0.516809 2_1:-13175477 None:intergenic
CATCTAACTCAAAGAAGCCT+AGG 0.517494 2_1:-13175560 None:intergenic
AATTCAATACGGACCAAGCC+AGG 0.523734 2_1:-13177160 None:intergenic
TCATGCAATTCAACTTAACA+TGG 0.528197 2_1:-13176843 None:intergenic
GGTGTAAGGAGTAGTTGAGG+GGG 0.528977 2_1:-13170388 None:intergenic
CTTGAGTAATTTGCATGTGA+GGG 0.532696 2_1:-13175698 None:intergenic
GATCTTTCAAAGCCTTCACC+CGG 0.537883 2_1:+13175582 Msa0196130:CDS
TCGATGCCGTCTTTGATGGA+AGG 0.538621 2_1:+13170721 Msa0196130:CDS
GGAGTGGAAGAAGCAGCAGC+AGG 0.541795 2_1:-13170576 None:intergenic
AAGACATCTTCCCCGGGTGA+AGG 0.546093 2_1:-13175594 None:intergenic
ATAGGAAGCTCAGAAGCTGC+AGG 0.551666 2_1:+13175825 Msa0196130:CDS
AGGTCAATCCCTGTTCCTGA+AGG 0.552318 2_1:-13175540 None:intergenic
AAACGGTGCAAATAACAAGA+TGG 0.554009 2_1:-13170181 None:intergenic
TGTTGATTGAGATGATATGA+AGG 0.555406 2_1:-13170504 None:intergenic
TGGTGGTGGGTGAGAAATCA+CGG 0.557116 2_1:-13170143 None:intergenic
AAGTAGAATGAATGGGGCTG+TGG 0.560453 2_1:-13170423 None:intergenic
AACAACAACCGCAATATGCA+TGG 0.563639 2_1:+13170526 Msa0196130:CDS
AACCACTGCAAAAGTGTACA+TGG 0.563738 2_1:-13177016 None:intergenic
TGAGGAACTTATGGAGATCA+GGG 0.564292 2_1:+13176785 Msa0196130:CDS
GGCCAACTCCTTTCTTAAAG+GGG 0.565364 2_1:-13175503 None:intergenic
AACGGTGCAAATAACAAGAT+GGG 0.566574 2_1:-13170180 None:intergenic
AGGATGATATTGAATACGAT+TGG 0.567391 2_1:-13170484 None:intergenic
GCTTGAGTAATTTGCATGTG+AGG 0.568254 2_1:-13175699 None:intergenic
AACATGTTTGGAAACTCCCT+CGG 0.570776 2_1:+13175638 Msa0196130:CDS
TATATGCCGTCAGCCAATTG+AGG 0.570906 2_1:+13176767 Msa0196130:CDS
TAACAAGATGGGAGTGGTGG+TGG 0.576356 2_1:-13170169 None:intergenic
TTGCTCAGCCTTCAGGAACA+GGG 0.578956 2_1:+13175532 Msa0196130:CDS
TGATAAGGTTGAAGAAGAAA+CGG 0.579846 2_1:-13170198 None:intergenic
ATCTTTCAAAGCCTTCACCC+GGG 0.580947 2_1:+13175583 Msa0196130:CDS
GTTTCAGCGCATATTACAAG+AGG 0.581361 2_1:-13175618 None:intergenic
GTGTAAGGAGTAGTTGAGGG+GGG 0.583331 2_1:-13170387 None:intergenic
GTTGAGTAATAGTAAGGTGG+TGG 0.583381 2_1:-13170315 None:intergenic
GACTTACCTTCCATCAAAGA+CGG 0.589000 2_1:-13170727 None:intergenic
GCTTTGATGACAGTGATCCT+GGG 0.589338 2_1:+13175847 Msa0196130:CDS
GGTGGTGGTGGAAGTTGTGG+TGG 0.595150 2_1:-13170288 None:intergenic
GAGTAATAGTAAGGTGGTGG+TGG 0.595861 2_1:-13170312 None:intergenic
TCAGGAACAGGGATTGACCT+AGG 0.597428 2_1:+13175543 Msa0196130:CDS
TGCAAATAACAAGATGGGAG+TGG 0.598240 2_1:-13170175 None:intergenic
AAGAAACAAGGTAATGATCA+GGG 0.599115 2_1:-13170692 None:intergenic
TGATGATCAACATAAGGAGG+TGG 0.603587 2_1:-13170597 None:intergenic
CCTATACAGTATAGATGACA+CGG 0.604567 2_1:-13177050 None:intergenic
AAGTAGTTAGACAGATTCTG+TGG 0.607111 2_1:+13175763 Msa0196130:CDS
GGATAGTAGTAACTTTGTTG+AGG 0.607650 2_1:-13170366 None:intergenic
TAAGTTCCTCAATTGGCTGA+CGG 0.613922 2_1:-13176773 None:intergenic
GCTGTCTTGGAGAAAAGTAA+TGG 0.618568 2_1:+13175720 Msa0196130:CDS
GGTTAAGCTGATCAATCTCA+AGG 0.622530 2_1:-13170671 None:intergenic
TGATGACAGTGATCCTGGGA+AGG 0.623579 2_1:+13175851 Msa0196130:CDS
GTGAGGGGATGCATCTAGCA+CGG 0.624270 2_1:-13175682 None:intergenic
ATCAACATAAGGAGGTGGAG+TGG 0.626424 2_1:-13170592 None:intergenic
ACAAATGCATCAGGAAAGAG+TGG 0.630441 2_1:-13175468 None:intergenic
TTGGAGAAGTAGAATGAATG+GGG 0.634290 2_1:-13170429 None:intergenic
CCCTAATGTTCACCGAACAA+GGG 0.634336 2_1:+13177109 Msa0196130:three_prime_UTR
TACTGCAGACATGTAAAAGG+GGG 0.635320 2_1:-13176904 None:intergenic
CTGCAGACATGTAAAAGGGG+GGG 0.636119 2_1:-13176902 None:intergenic
GGTGGAGGCCATGCATATTG+CGG 0.636895 2_1:-13170534 None:intergenic
TCTTTCAAAGCCTTCACCCG+GGG 0.642784 2_1:+13175584 Msa0196130:CDS
CATGCAATTCAACTTAACAT+GGG 0.644199 2_1:-13176842 None:intergenic
AATATGCATGACTGAACCAA+AGG 0.650537 2_1:+13175881 Msa0196130:CDS
TCTGTTGAGTAATAGTAAGG+TGG 0.650740 2_1:-13170318 None:intergenic
TTACTGCAGACATGTAAAAG+GGG 0.651725 2_1:-13176905 None:intergenic
GGGCGAAATATAATGACACC+TGG 0.651878 2_1:+13177142 Msa0196130:three_prime_UTR
CATCGAAAACAAAAGAAACA+AGG 0.651934 2_1:-13170704 None:intergenic
AGAGGAAAGACATCTTCCCC+GGG 0.652934 2_1:-13175600 None:intergenic
ACACTCAAATGGGTATTACG+TGG 0.668710 2_1:+13170220 Msa0196130:exon
CGAACAAGGGAAGCAAACAA+GGG 0.675376 2_1:+13177122 Msa0196130:three_prime_UTR
AATCTTACCATATGTCGACA+AGG 0.677295 2_1:-13175918 None:intergenic
ATGCAATTCAACTTAACATG+GGG 0.677496 2_1:-13176841 None:intergenic
TTGGAGAAAAGTAATGGTGG+TGG 0.678741 2_1:+13175726 Msa0196130:CDS
GTTTGATGATCAACATAAGG+AGG 0.683417 2_1:-13170600 None:intergenic
TTGAGTAATTTGCATGTGAG+GGG 0.691901 2_1:-13175697 None:intergenic
ACTGCAGACATGTAAAAGGG+GGG 0.694211 2_1:-13176903 None:intergenic
AAATAACAAGATGGGAGTGG+TGG 0.701409 2_1:-13170172 None:intergenic
CAGAAAAGAGTACGACTCGG+TGG 0.714961 2_1:-13170073 None:intergenic
GTCTTGGAGAAAAGTAATGG+TGG 0.719546 2_1:+13175723 Msa0196130:CDS
AAACAGAAAAGAGTACGACT+CGG 0.729013 2_1:-13170076 None:intergenic
CTATACAGTATAGATGACAC+GGG 0.741653 2_1:-13177049 None:intergenic
CGATTGGTAGTAGAATTGGG+AGG 0.746574 2_1:-13170468 None:intergenic
GTGAGTGTGCAAAAGCTCTG+CGG 0.761192 2_1:+13176724 Msa0196130:CDS
TGGTGGGTGAGAAATCACGG+CGG 0.845233 2_1:-13170140 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATTTATAATTAATT+TGG + chr2_1:13174671-13174690 Msa0196130:intron 0.0%
!!! ATATATAATTCATAAACTTT+TGG - chr2_1:13171414-13171433 None:intergenic 10.0%
!!! TGAATTTATATTATTAGTTT+TGG + chr2_1:13174730-13174749 Msa0196130:intron 10.0%
!!! TTTCAAGTTAAAATTAATTC+TGG - chr2_1:13171127-13171146 None:intergenic 15.0%
!!! ATTAATTTTAACTTGAAACT+AGG + chr2_1:13171129-13171148 Msa0196130:intron 15.0%
!!! GAATTTTAAAAACTTAGTTA+TGG - chr2_1:13171952-13171971 None:intergenic 15.0%
!!! AAGTTTTTAAAATTCTTATC+TGG + chr2_1:13171957-13171976 Msa0196130:intron 15.0%
!! ACAATTTCATTAATATACTA+TGG - chr2_1:13173068-13173087 None:intergenic 15.0%
!! ATATAAAATAGTATCTTAGT+AGG - chr2_1:13173516-13173535 None:intergenic 15.0%
!!! ATGTTTCTTGTAATTTTTAA+AGG - chr2_1:13174143-13174162 None:intergenic 15.0%
!! TATTATATATACAAAATGCA+CGG + chr2_1:13174590-13174609 Msa0196130:intron 15.0%
!! AATGAAATGTTATATATGTA+TGG + chr2_1:13175015-13175034 Msa0196130:intron 15.0%
!!! ATATTACTAAAAGTGTAAAA+TGG + chr2_1:13176326-13176345 Msa0196130:intron 15.0%
!!! TCAATAATTTGTCTATAATT+TGG + chr2_1:13176965-13176984 Msa0196130:three_prime_UTR 15.0%
!!! CAATAATTTGTCTATAATTT+GGG + chr2_1:13176966-13176985 Msa0196130:three_prime_UTR 15.0%
!! TTTCTTTCTCATAGAAAAAA+AGG + chr2_1:13170097-13170116 Msa0196130:five_prime_UTR 20.0%
!! TTCTTTCTCATAGAAAAAAA+GGG + chr2_1:13170098-13170117 Msa0196130:five_prime_UTR 20.0%
!! AAACAATGTTAATGTTCATA+AGG + chr2_1:13170638-13170657 Msa0196130:CDS 20.0%
!! AATTTATAGTGGTTTATGTT+TGG - chr2_1:13171222-13171241 None:intergenic 20.0%
!! CAAAAACATAAAAAAGAAGA+AGG + chr2_1:13171559-13171578 Msa0196130:intron 20.0%
!!! AAGTTAGTACATTTTTCTTA+CGG - chr2_1:13171608-13171627 None:intergenic 20.0%
!! GTTTCTATATATACTAGATT+AGG - chr2_1:13171668-13171687 None:intergenic 20.0%
!! CATATAGTCATATATTATGT+AGG + chr2_1:13171915-13171934 Msa0196130:intron 20.0%
!! AAATTACAAAACAATTCACA+TGG - chr2_1:13172080-13172099 None:intergenic 20.0%
!! GTAATGTTTGTTTATGAAAA+TGG - chr2_1:13172659-13172678 None:intergenic 20.0%
!! TTTCATTAATATACTATGGT+CGG - chr2_1:13173064-13173083 None:intergenic 20.0%
!! TTAGATTCTAATCTTATGAA+TGG - chr2_1:13173209-13173228 None:intergenic 20.0%
!!! GCTGATATTTTAAGAAAAAA+AGG + chr2_1:13173426-13173445 Msa0196130:intron 20.0%
!!! TTTTTTTAAGAGACTTAAAG+TGG + chr2_1:13173622-13173641 Msa0196130:intron 20.0%
!! ATAATATACCAAGTATATGT+TGG + chr2_1:13173870-13173889 Msa0196130:intron 20.0%
!! GTTTCAAGAATATGAAAAAA+CGG + chr2_1:13174956-13174975 Msa0196130:intron 20.0%
!! ACATTATTAAATTGCCAATA+TGG - chr2_1:13175088-13175107 None:intergenic 20.0%
!! GGATAAGTATAATTGTATAA+TGG + chr2_1:13175345-13175364 Msa0196130:intron 20.0%
!! ATGAAGAAAACAAAAATTGA+AGG - chr2_1:13176381-13176400 None:intergenic 20.0%
!!! ACATGTATTGTTTAAAATCA+TGG + chr2_1:13176464-13176483 Msa0196130:intron 20.0%
!!! CATGTATTGTTTAAAATCAT+GGG + chr2_1:13176465-13176484 Msa0196130:intron 20.0%
!! TTACAAACAAAGAATTTCTA+AGG - chr2_1:13176873-13176892 None:intergenic 20.0%
! CTTGTTTGTTTATGTATGTT+TGG + chr2_1:13170780-13170799 Msa0196130:intron 25.0%
! TAGTAGAATTAGTGTATGTT+TGG + chr2_1:13170842-13170861 Msa0196130:intron 25.0%
! TCTGATTAAAAGTGAATTGA+AGG + chr2_1:13170902-13170921 Msa0196130:intron 25.0%
! TAAAAGTGAATTGAAGGTAA+AGG + chr2_1:13170908-13170927 Msa0196130:intron 25.0%
! AAAAGTGAATTGAAGGTAAA+GGG + chr2_1:13170909-13170928 Msa0196130:intron 25.0%
!!! TACAAATTTTAGCTTCAAGT+AGG + chr2_1:13171006-13171025 Msa0196130:intron 25.0%
! TAAAATTAATTCTGGACACA+TGG - chr2_1:13171119-13171138 None:intergenic 25.0%
!! AAAGTGAGTTGAATTTATAG+TGG - chr2_1:13171233-13171252 None:intergenic 25.0%
! ATCAGAGTTGTTAACTAATT+TGG + chr2_1:13171449-13171468 Msa0196130:intron 25.0%
! TAATAACATCATGTTTACGT+TGG - chr2_1:13171640-13171659 None:intergenic 25.0%
! TCTAGTATATATAGAAACCT+TGG + chr2_1:13171670-13171689 Msa0196130:intron 25.0%
! CTAGTATATATAGAAACCTT+GGG + chr2_1:13171671-13171690 Msa0196130:intron 25.0%
! TAGTATATATAGAAACCTTG+GGG + chr2_1:13171672-13171691 Msa0196130:intron 25.0%
!! TCTAATTGATTCAAAACTCT+TGG + chr2_1:13171762-13171781 Msa0196130:intron 25.0%
! AAAACTCTTGGAAATTGTTT+AGG + chr2_1:13171774-13171793 Msa0196130:intron 25.0%
! CACATGGTTACATAATATAT+GGG - chr2_1:13172064-13172083 None:intergenic 25.0%
! TCACATGGTTACATAATATA+TGG - chr2_1:13172065-13172084 None:intergenic 25.0%
! TCAAATATCTCTGTCATTAT+AGG + chr2_1:13172135-13172154 Msa0196130:intron 25.0%
! CAAATATCTCTGTCATTATA+GGG + chr2_1:13172136-13172155 Msa0196130:intron 25.0%
! AAGATGAATGAGTATATTGT+AGG - chr2_1:13172429-13172448 None:intergenic 25.0%
!! AGTTAAAATGATTTTCAGAG+TGG + chr2_1:13172983-13173002 Msa0196130:intron 25.0%
!! GTTAAAATGATTTTCAGAGT+GGG + chr2_1:13172984-13173003 Msa0196130:intron 25.0%
!! TTAAAATGATTTTCAGAGTG+GGG + chr2_1:13172985-13173004 Msa0196130:intron 25.0%
!! TTGTACTTCTTTGATACTTT+TGG + chr2_1:13173279-13173298 Msa0196130:intron 25.0%
!!! TTTTAAGAAAAAAAGGTAGC+AGG + chr2_1:13173433-13173452 Msa0196130:intron 25.0%
!! CACTAAAATCTAAAATAACG+AGG - chr2_1:13173788-13173807 None:intergenic 25.0%
!!! TTTAGATTTTAGTGAAAGTG+TGG + chr2_1:13173794-13173813 Msa0196130:intron 25.0%
! ATTACAAGAAACATGTTTGA+TGG + chr2_1:13174149-13174168 Msa0196130:intron 25.0%
! ACGTAAAGGTAATATTTACA+TGG - chr2_1:13174355-13174374 None:intergenic 25.0%
!! TTATTTTCCAAATTTAGCGA+GGG - chr2_1:13174430-13174449 None:intergenic 25.0%
!!! TTTATTTTCCAAATTTAGCG+AGG - chr2_1:13174431-13174450 None:intergenic 25.0%
!!! TCTATGAACTCGTTATTTTA+AGG - chr2_1:13174552-13174571 None:intergenic 25.0%
!!! CAAGAAATTTTAAGTAGTGT+AGG - chr2_1:13175041-13175060 None:intergenic 25.0%
!! TTCTATTTTGTTCTTCTGTT+AGG - chr2_1:13175235-13175254 None:intergenic 25.0%
! TATACTTATCCATCTTCAAA+CGG - chr2_1:13175336-13175355 None:intergenic 25.0%
! TATGAGTTAAGAGAACTATA+TGG + chr2_1:13175801-13175820 Msa0196130:CDS 25.0%
! TTAAGAGAACTATATGGAAT+AGG + chr2_1:13175807-13175826 Msa0196130:CDS 25.0%
! AGTAATATTAGCAATGACAT+TGG - chr2_1:13176314-13176333 None:intergenic 25.0%
!! TACTAAAAGTGTAAAATGGA+TGG + chr2_1:13176330-13176349 Msa0196130:intron 25.0%
! ATAAATTAAGATTATACCGC+AGG - chr2_1:13176406-13176425 None:intergenic 25.0%
!!! TCTTAATTTATTTTCAGCGA+TGG + chr2_1:13176415-13176434 Msa0196130:intron 25.0%
!!! CTTAATTTATTTTCAGCGAT+GGG + chr2_1:13176416-13176435 Msa0196130:intron 25.0%
! TCACAATAGGAAATGAAATA+TGG - chr2_1:13176662-13176681 None:intergenic 25.0%
! AATATGAGAATAGTCACAAT+AGG - chr2_1:13176675-13176694 None:intergenic 25.0%
! TTACAAACACGAATTCAATA+CGG - chr2_1:13177174-13177193 None:intergenic 25.0%
TGATAAGGTTGAAGAAGAAA+CGG - chr2_1:13170201-13170220 None:intergenic 30.0%
TGTTCTGTTGAGTAATAGTA+AGG - chr2_1:13170324-13170343 None:intergenic 30.0%
! ATACGATTGGTAGTAGAATT+GGG - chr2_1:13170474-13170493 None:intergenic 30.0%
! AATACGATTGGTAGTAGAAT+TGG - chr2_1:13170475-13170494 None:intergenic 30.0%
AGGATGATATTGAATACGAT+TGG - chr2_1:13170487-13170506 None:intergenic 30.0%
! TGTTGATTGAGATGATATGA+AGG - chr2_1:13170507-13170526 None:intergenic 30.0%
AAGAAACAAGGTAATGATCA+GGG - chr2_1:13170695-13170714 None:intergenic 30.0%
AAAGAAACAAGGTAATGATC+AGG - chr2_1:13170696-13170715 None:intergenic 30.0%
CATCGAAAACAAAAGAAACA+AGG - chr2_1:13170707-13170726 None:intergenic 30.0%
AAGGTAAAGGGATTTATGTA+TGG + chr2_1:13170921-13170940 Msa0196130:intron 30.0%
GTTGTAATCAATTATACACC+TGG + chr2_1:13171058-13171077 Msa0196130:intron 30.0%
GATCTTGAGTTAATTTCTTG+AGG + chr2_1:13171386-13171405 Msa0196130:intron 30.0%
AGAGTTGTTAACTAATTTGG+TGG + chr2_1:13171452-13171471 Msa0196130:intron 30.0%
! ATTTTGCTTGATTGCATAGT+AGG + chr2_1:13171478-13171497 Msa0196130:intron 30.0%
! TTTTGCTTGATTGCATAGTA+GGG + chr2_1:13171479-13171498 Msa0196130:intron 30.0%
! TTAGTACATTTTTCTTACGG+AGG - chr2_1:13171605-13171624 None:intergenic 30.0%
AGTATATATAGAAACCTTGG+GGG + chr2_1:13171673-13171692 Msa0196130:intron 30.0%
TTGATACTACTTAGAAACAG+TGG - chr2_1:13171733-13171752 None:intergenic 30.0%
AATTGTTTAGGTAATCTGCA+AGG + chr2_1:13171786-13171805 Msa0196130:intron 30.0%
ATTGTTTAGGTAATCTGCAA+GGG + chr2_1:13171787-13171806 Msa0196130:intron 30.0%
TGGATAAGATGTTATGAACT+AGG + chr2_1:13171837-13171856 Msa0196130:intron 30.0%
GGATAAGATGTTATGAACTA+GGG + chr2_1:13171838-13171857 Msa0196130:intron 30.0%
TACATCCTCTTTAACATGTT+AGG + chr2_1:13172100-13172119 Msa0196130:intron 30.0%
AACAACCTAACATGTTAAAG+AGG - chr2_1:13172108-13172127 None:intergenic 30.0%
ATCGAAGTCATTCTGAATTT+AGG - chr2_1:13172176-13172195 None:intergenic 30.0%
TTCATGATAGTTTCTCCAAT+AGG + chr2_1:13172325-13172344 Msa0196130:intron 30.0%
TATAGAAAGGAGAATACATC+AGG - chr2_1:13172392-13172411 None:intergenic 30.0%
GTCTGAAAATACTAGGTTAT+AGG - chr2_1:13172502-13172521 None:intergenic 30.0%
! CACTTGATTTTCTCTCATAT+TGG + chr2_1:13172550-13172569 Msa0196130:intron 30.0%
TTTGTCTCATACAACATTGT+TGG + chr2_1:13172591-13172610 Msa0196130:intron 30.0%
AAACACACACACAAAAGAAA+GGG - chr2_1:13172682-13172701 None:intergenic 30.0%
TAAACACACACACAAAAGAA+AGG - chr2_1:13172683-13172702 None:intergenic 30.0%
AACACTTCAAAATTGATGAG+AGG + chr2_1:13172783-13172802 Msa0196130:intron 30.0%
!!! TCTATTTTAACACTGGAAAG+GGG - chr2_1:13172959-13172978 None:intergenic 30.0%
!!! CTCTATTTTAACACTGGAAA+GGG - chr2_1:13172960-13172979 None:intergenic 30.0%
!!! TCTCTATTTTAACACTGGAA+AGG - chr2_1:13172961-13172980 None:intergenic 30.0%
!!! ACTACTCTCTATTTTAACAC+TGG - chr2_1:13172966-13172985 None:intergenic 30.0%
GATTCTAATCTTATGAATGG+TGG - chr2_1:13173206-13173225 None:intergenic 30.0%
TAGACACAGAAGACAAAATA+TGG - chr2_1:13173237-13173256 None:intergenic 30.0%
CAGGATAGAAGATAAAATCA+TGG + chr2_1:13173452-13173471 Msa0196130:intron 30.0%
!! TAATTCAAGTTGAGAGTCAA+AGG - chr2_1:13173591-13173610 None:intergenic 30.0%
ACTCTCAACTTGAATTAAAG+TGG + chr2_1:13173594-13173613 Msa0196130:intron 30.0%
! GACTTAAAGTGGTTAGTTAA+TGG + chr2_1:13173633-13173652 Msa0196130:intron 30.0%
!!! TCTACAGTCACTTTTGAATT+AGG + chr2_1:13173751-13173770 Msa0196130:intron 30.0%
AAGTTCTTCCAACATATACT+TGG - chr2_1:13173881-13173900 None:intergenic 30.0%
AGAACTTCTAACTTGAATGA+AGG + chr2_1:13173894-13173913 Msa0196130:intron 30.0%
GTTGCTATGGTTTCAATATA+TGG + chr2_1:13173916-13173935 Msa0196130:intron 30.0%
ACTGAATCAAGAATAACAAG+TGG - chr2_1:13173959-13173978 None:intergenic 30.0%
! CTCTTGATTTTGAACCATAT+TGG + chr2_1:13173982-13174001 Msa0196130:intron 30.0%
CATGTTTATAATGCATGTGA+TGG - chr2_1:13174096-13174115 None:intergenic 30.0%
CATCACATGCATTATAAACA+TGG + chr2_1:13174094-13174113 Msa0196130:intron 30.0%
GTCGAAATTATCTTCTTGTT+AGG + chr2_1:13174230-13174249 Msa0196130:intron 30.0%
ACGAGTTCATAGATAATAGA+AGG + chr2_1:13174559-13174578 Msa0196130:intron 30.0%
CGAGTTCATAGATAATAGAA+GGG + chr2_1:13174560-13174579 Msa0196130:intron 30.0%
GTATGCATCATTCATTGTAA+AGG + chr2_1:13175106-13175125 Msa0196130:intron 30.0%
AACTAATTTGAGAGATCATG+CGG - chr2_1:13175161-13175180 None:intergenic 30.0%
!!! AATTAGTTTTACCTGTGTTC+TGG + chr2_1:13175173-13175192 Msa0196130:intron 30.0%
CAAAATAGAACCACAGTTTA+TGG + chr2_1:13175245-13175264 Msa0196130:intron 30.0%
! GAAGTTGCAATTAGTTTGAT+TGG + chr2_1:13175271-13175290 Msa0196130:intron 30.0%
!! TCTGTCTAACTACTTTTATC+TGG - chr2_1:13175758-13175777 None:intergenic 30.0%
! CCTGGAATAAATGCATTTTA+CGG + chr2_1:13175985-13176004 Msa0196130:intron 30.0%
! ATAAATGCATTTTACGGTCT+TGG + chr2_1:13175991-13176010 Msa0196130:intron 30.0%
TATCAACTATATGTAACGCA+AGG - chr2_1:13176616-13176635 None:intergenic 30.0%
ATGCAATTCAACTTAACATG+GGG - chr2_1:13176844-13176863 None:intergenic 30.0%
CATGCAATTCAACTTAACAT+GGG - chr2_1:13176845-13176864 None:intergenic 30.0%
TCATGCAATTCAACTTAACA+TGG - chr2_1:13176846-13176865 None:intergenic 30.0%
TGACTACAGTTAACAGAAAA+GGG - chr2_1:13176948-13176967 None:intergenic 30.0%
TTGACTACAGTTAACAGAAA+AGG - chr2_1:13176949-13176968 None:intergenic 30.0%
! AAACAGAAAAGAGTACGACT+CGG - chr2_1:13170079-13170098 None:intergenic 35.0%
AACGGTGCAAATAACAAGAT+GGG - chr2_1:13170183-13170202 None:intergenic 35.0%
AAACGGTGCAAATAACAAGA+TGG - chr2_1:13170184-13170203 None:intergenic 35.0%
TCAACCTTATCACACTCAAA+TGG + chr2_1:13170209-13170228 Msa0196130:exon 35.0%
CAACCTTATCACACTCAAAT+GGG + chr2_1:13170210-13170229 Msa0196130:exon 35.0%
ATACCCATTTGAGTGTGATA+AGG - chr2_1:13170216-13170235 None:intergenic 35.0%
TCTGTTGAGTAATAGTAAGG+TGG - chr2_1:13170321-13170340 None:intergenic 35.0%
TAGTAGTAACTTTGTTGAGG+TGG - chr2_1:13170366-13170385 None:intergenic 35.0%
GGATAGTAGTAACTTTGTTG+AGG - chr2_1:13170369-13170388 None:intergenic 35.0%
TTGGAGAAGTAGAATGAATG+GGG - chr2_1:13170432-13170451 None:intergenic 35.0%
GTTGGAGAAGTAGAATGAAT+GGG - chr2_1:13170433-13170452 None:intergenic 35.0%
AGGATAGTTATTGTTAGGGT+TGG - chr2_1:13170451-13170470 None:intergenic 35.0%
TGGGAGGATAGTTATTGTTA+GGG - chr2_1:13170455-13170474 None:intergenic 35.0%
TTGGGAGGATAGTTATTGTT+AGG - chr2_1:13170456-13170475 None:intergenic 35.0%
! GTTTGATGATCAACATAAGG+AGG - chr2_1:13170603-13170622 None:intergenic 35.0%
! GCAGTTTGATGATCAACATA+AGG - chr2_1:13170606-13170625 None:intergenic 35.0%
TTAGTGTATGTTTGGATCTG+CGG + chr2_1:13170850-13170869 Msa0196130:intron 35.0%
GTAATCAATTATACACCTGG+CGG + chr2_1:13171061-13171080 Msa0196130:intron 35.0%
! ATTGACATGTTTCTAAGCAG+TGG + chr2_1:13171361-13171380 Msa0196130:intron 35.0%
TTTGCTTGATTGCATAGTAG+GGG + chr2_1:13171480-13171499 Msa0196130:intron 35.0%
TGCAAAAAAAGTTTCTCGCA+GGG - chr2_1:13171520-13171539 None:intergenic 35.0%
ATACTACTTAGAAACAGTGG+CGG - chr2_1:13171730-13171749 None:intergenic 35.0%
AGTGTGTAGCTTAGTGTTAT+AGG + chr2_1:13171810-13171829 Msa0196130:intron 35.0%
AGCTTAGTGTTATAGGATAC+TGG + chr2_1:13171817-13171836 Msa0196130:intron 35.0%
TGGAATGTATTGTAATGCAC+AGG + chr2_1:13172008-13172027 Msa0196130:intron 35.0%
GGAATGTATTGTAATGCACA+GGG + chr2_1:13172009-13172028 Msa0196130:intron 35.0%
GAATGTATTGTAATGCACAG+GGG + chr2_1:13172010-13172029 Msa0196130:intron 35.0%
AACTATCATGAAAGACCTAG+AGG - chr2_1:13172317-13172336 None:intergenic 35.0%
AGTTTCTCCAATAGGTTTCT+TGG + chr2_1:13172333-13172352 Msa0196130:intron 35.0%
AGGAAAACCAAGAAACCTAT+TGG - chr2_1:13172343-13172362 None:intergenic 35.0%
ATAGTCATTGCTATAGGCAA+AGG - chr2_1:13172363-13172382 None:intergenic 35.0%
TCTCCTTTCTATAGAATCCA+TGG + chr2_1:13172399-13172418 Msa0196130:intron 35.0%
CTCCTTTCTATAGAATCCAT+GGG + chr2_1:13172400-13172419 Msa0196130:intron 35.0%
ATAGTGTTAAGAGAGAGTTG+GGG - chr2_1:13172469-13172488 None:intergenic 35.0%
GATAGTGTTAAGAGAGAGTT+GGG - chr2_1:13172470-13172489 None:intergenic 35.0%
! TGATAGTGTTAAGAGAGAGT+TGG - chr2_1:13172471-13172490 None:intergenic 35.0%
GTATGAGACAAATTGTTGTG+TGG - chr2_1:13172583-13172602 None:intergenic 35.0%
AACACACACACAAAAGAAAG+GGG - chr2_1:13172681-13172700 None:intergenic 35.0%
ATGCATTATGCAGAACAAAC+AGG + chr2_1:13172719-13172738 Msa0196130:intron 35.0%
ATTATGCAGAACAAACAGGA+AGG + chr2_1:13172723-13172742 Msa0196130:intron 35.0%
TTCGTGTGTTAAGAAATGTG+AGG + chr2_1:13172913-13172932 Msa0196130:intron 35.0%
! CAGGGAACTTTTGAATTACA+TGG - chr2_1:13173110-13173129 None:intergenic 35.0%
TAGAGATCTCAGGTATTAAG+TGG - chr2_1:13173156-13173175 None:intergenic 35.0%
! TCTAGAGCAACTTGCATAAT+AGG + chr2_1:13173172-13173191 Msa0196130:intron 35.0%
AGCATAAGAGTAAATGTGGT+CGG - chr2_1:13173348-13173367 None:intergenic 35.0%
! CAGAAGCATAAGAGTAAATG+TGG - chr2_1:13173352-13173371 None:intergenic 35.0%
GCAAATGTGATATTCTCTCT+CGG + chr2_1:13173371-13173390 Msa0196130:intron 35.0%
! TAAAGTGGTTAGTTAATGGC+AGG + chr2_1:13173637-13173656 Msa0196130:intron 35.0%
! AAAGTGGTTAGTTAATGGCA+GGG + chr2_1:13173638-13173657 Msa0196130:intron 35.0%
ATCATCCTATTGTTAGAGGA+GGG - chr2_1:13173668-13173687 None:intergenic 35.0%
AGCTGAGTTTGAAAGTTAGT+AGG + chr2_1:13173831-13173850 Msa0196130:intron 35.0%
AACTTGAATGAAGGTTGCTA+TGG + chr2_1:13173903-13173922 Msa0196130:intron 35.0%
GACTTATGAGTCTACCAATA+TGG - chr2_1:13173999-13174018 None:intergenic 35.0%
!!! CATGGTTTTATTCTTGTGAG+AGG + chr2_1:13174112-13174131 Msa0196130:intron 35.0%
TCCACTGCTGTTAGAATTAT+TGG + chr2_1:13174280-13174299 Msa0196130:intron 35.0%
ACCAATAATTCTAACAGCAG+TGG - chr2_1:13174284-13174303 None:intergenic 35.0%
AAAACTAGTACCCATTGTGT+TGG + chr2_1:13174455-13174474 Msa0196130:intron 35.0%
TATCTTACCACCAACACAAT+GGG - chr2_1:13174468-13174487 None:intergenic 35.0%
GGTTAAAAAGTTAGAGAGTC+TGG - chr2_1:13174531-13174550 None:intergenic 35.0%
ACGTCTAAATGTAGCCATAT+TGG + chr2_1:13175071-13175090 Msa0196130:intron 35.0%
CAACTTCAATCCATAAACTG+TGG - chr2_1:13175258-13175277 None:intergenic 35.0%
AAAATGAGACCGTTTGAAGA+TGG + chr2_1:13175324-13175343 Msa0196130:intron 35.0%
! TACTGTCTTTTACTTTGCGA+AGG + chr2_1:13175422-13175441 Msa0196130:CDS 35.0%
CGAAGGAAGAAGATAAATGT+AGG + chr2_1:13175439-13175458 Msa0196130:CDS 35.0%
AATATGCGCTGAAACATGTT+TGG + chr2_1:13175626-13175645 Msa0196130:CDS 35.0%
! TTGAGTAATTTGCATGTGAG+GGG - chr2_1:13175700-13175719 None:intergenic 35.0%
! CTTGAGTAATTTGCATGTGA+GGG - chr2_1:13175701-13175720 None:intergenic 35.0%
AAGTAGTTAGACAGATTCTG+TGG + chr2_1:13175763-13175782 Msa0196130:CDS 35.0%
AATATGCATGACTGAACCAA+AGG + chr2_1:13175881-13175900 Msa0196130:CDS 35.0%
AATCTTACCATATGTCGACA+AGG - chr2_1:13175921-13175940 None:intergenic 35.0%
CTACGTACACATATATAGAG+TGG + chr2_1:13175951-13175970 Msa0196130:intron 35.0%
AGAGTGGATAATCAATTACC+TGG + chr2_1:13175967-13175986 Msa0196130:intron 35.0%
CCGTAAAATGCATTTATTCC+AGG - chr2_1:13175988-13176007 None:intergenic 35.0%
TGTTATAGCAGAGCAGAATT+TGG + chr2_1:13176101-13176120 Msa0196130:intron 35.0%
TTAGTGTTGTCATTCGCATA+TGG - chr2_1:13176232-13176251 None:intergenic 35.0%
!! TTTGTTTTCTTCATCTCCTG+CGG + chr2_1:13176387-13176406 Msa0196130:intron 35.0%
ATCTCCATAAGTTCCTCAAT+TGG - chr2_1:13176783-13176802 None:intergenic 35.0%
TTACTGCAGACATGTAAAAG+GGG - chr2_1:13176908-13176927 None:intergenic 35.0%
CTTACTGCAGACATGTAAAA+GGG - chr2_1:13176909-13176928 None:intergenic 35.0%
GTCTGCAGTAAGGTAATATA+TGG + chr2_1:13176917-13176936 Msa0196130:three_prime_UTR 35.0%
CTATACAGTATAGATGACAC+GGG - chr2_1:13177052-13177071 None:intergenic 35.0%
CCTATACAGTATAGATGACA+CGG - chr2_1:13177053-13177072 None:intergenic 35.0%
AAATATAATGACACCTGGCT+TGG + chr2_1:13177147-13177166 Msa0196130:three_prime_UTR 35.0%
AAATAACAAGATGGGAGTGG+TGG - chr2_1:13170175-13170194 None:intergenic 40.0%
TGCAAATAACAAGATGGGAG+TGG - chr2_1:13170178-13170197 None:intergenic 40.0%
ACACTCAAATGGGTATTACG+TGG + chr2_1:13170220-13170239 Msa0196130:exon 40.0%
GTTGAGTAATAGTAAGGTGG+TGG - chr2_1:13170318-13170337 None:intergenic 40.0%
TAGTAACTTTGTTGAGGTGG+TGG - chr2_1:13170363-13170382 None:intergenic 40.0%
GGTTGGAGAAGTAGAATGAA+TGG - chr2_1:13170434-13170453 None:intergenic 40.0%
AACAACAACCGCAATATGCA+TGG + chr2_1:13170526-13170545 Msa0196130:CDS 40.0%
TGATGATCAACATAAGGAGG+TGG - chr2_1:13170600-13170619 None:intergenic 40.0%
GGTTAAGCTGATCAATCTCA+AGG - chr2_1:13170674-13170693 None:intergenic 40.0%
GACTTACCTTCCATCAAAGA+CGG - chr2_1:13170730-13170749 None:intergenic 40.0%
! ATGTTTGGTTTCCCTTCTAG+TGG - chr2_1:13171093-13171112 None:intergenic 40.0%
TTGTAACCCTTGTCATGTGA+TGG + chr2_1:13171332-13171351 Msa0196130:intron 40.0%
TCTTCTCCATCACATGACAA+GGG - chr2_1:13171341-13171360 None:intergenic 40.0%
TTCTTCTCCATCACATGACA+AGG - chr2_1:13171342-13171361 None:intergenic 40.0%
TTGCTTGATTGCATAGTAGG+GGG + chr2_1:13171481-13171500 Msa0196130:intron 40.0%
GTGCAAAAAAAGTTTCTCGC+AGG - chr2_1:13171521-13171540 None:intergenic 40.0%
!!! CAACTTTTGTACTGGTTCAG+TGG - chr2_1:13171985-13172004 None:intergenic 40.0%
CACTGAACCAGTACAAAAGT+TGG + chr2_1:13171983-13172002 Msa0196130:intron 40.0%
!! AACCAGTACAAAAGTTGGTG+TGG + chr2_1:13171988-13172007 Msa0196130:intron 40.0%
! TTCCACACCAACTTTTGTAC+TGG - chr2_1:13171993-13172012 None:intergenic 40.0%
!! TAGACAAGCCTTATTCCACT+AGG + chr2_1:13172221-13172240 Msa0196130:intron 40.0%
TATCCAAACCATTGACCTCT+AGG + chr2_1:13172299-13172318 Msa0196130:intron 40.0%
ATGAAAGACCTAGAGGTCAA+TGG - chr2_1:13172310-13172329 None:intergenic 40.0%
TCGAGGATAGTCATTGCTAT+AGG - chr2_1:13172369-13172388 None:intergenic 40.0%
GACCCATGGATTCTATAGAA+AGG - chr2_1:13172405-13172424 None:intergenic 40.0%
AGTATATTGTAGGAGACCCA+TGG - chr2_1:13172419-13172438 None:intergenic 40.0%
GCAGGATGTCTGAAAATACT+AGG - chr2_1:13172509-13172528 None:intergenic 40.0%
TGATCGTCTCTTAAGGTTAG+TGG - chr2_1:13172823-13172842 None:intergenic 40.0%
!! ATGGCTTTGATCGTCTCTTA+AGG - chr2_1:13172830-13172849 None:intergenic 40.0%
GATCATCCTATTGTTAGAGG+AGG - chr2_1:13173669-13173688 None:intergenic 40.0%
CTGGATCATCCTATTGTTAG+AGG - chr2_1:13173672-13173691 None:intergenic 40.0%
AGACACAACTGTCTATCAGT+TGG - chr2_1:13174031-13174050 None:intergenic 40.0%
! AATGCATGTGATGGAAAAGC+CGG - chr2_1:13174087-13174106 None:intergenic 40.0%
TTTAGACGTCAGCAACGTAA+AGG - chr2_1:13174369-13174388 None:intergenic 40.0%
CTATCTTACCACCAACACAA+TGG - chr2_1:13174469-13174488 None:intergenic 40.0%
CAGATGTGAAATCACAAGAG+AGG + chr2_1:13174850-13174869 Msa0196130:intron 40.0%
GAAATCACAAGAGAGGTGAA+TGG + chr2_1:13174857-13174876 Msa0196130:intron 40.0%
GAGAGGTGAATGGTAAAATG+AGG + chr2_1:13174867-13174886 Msa0196130:intron 40.0%
ACAAATGCATCAGGAAAGAG+TGG - chr2_1:13175471-13175490 None:intergenic 40.0%
TTCTTAAAGGGGACTTTGAC+TGG - chr2_1:13175495-13175514 None:intergenic 40.0%
! GTCAAAGTCCCCTTTAAGAA+AGG + chr2_1:13175495-13175514 Msa0196130:CDS 40.0%
TGGCCAACTCCTTTCTTAAA+GGG - chr2_1:13175507-13175526 None:intergenic 40.0%
CATCTAACTCAAAGAAGCCT+AGG - chr2_1:13175563-13175582 None:intergenic 40.0%
GTTTCAGCGCATATTACAAG+AGG - chr2_1:13175621-13175640 None:intergenic 40.0%
AACATGTTTGGAAACTCCCT+CGG + chr2_1:13175638-13175657 Msa0196130:CDS 40.0%
! GCTTGAGTAATTTGCATGTG+AGG - chr2_1:13175702-13175721 None:intergenic 40.0%
GCAAATTACTCAAGCTGTCT+TGG + chr2_1:13175707-13175726 Msa0196130:CDS 40.0%
GCTGTCTTGGAGAAAAGTAA+TGG + chr2_1:13175720-13175739 Msa0196130:CDS 40.0%
GTCTTGGAGAAAAGTAATGG+TGG + chr2_1:13175723-13175742 Msa0196130:CDS 40.0%
TTGGAGAAAAGTAATGGTGG+TGG + chr2_1:13175726-13175745 Msa0196130:CDS 40.0%
! AGACAGATTCTGTGGATTGA+TGG + chr2_1:13175771-13175790 Msa0196130:CDS 40.0%
TGTCTTACCTTGTCGACATA+TGG + chr2_1:13175911-13175930 Msa0196130:CDS 40.0%
CTGATGTAGCATCAGTTGTA+TGG + chr2_1:13176268-13176287 Msa0196130:intron 40.0%
TGTAGCATCAGTTGTATGGA+TGG + chr2_1:13176272-13176291 Msa0196130:intron 40.0%
GTAGCATCAGTTGTATGGAT+GGG + chr2_1:13176273-13176292 Msa0196130:intron 40.0%
ATGTCAGAACTTATAGACCG+TGG + chr2_1:13176524-13176543 Msa0196130:intron 40.0%
ACTTATAGACCGTGGAAAAG+TGG + chr2_1:13176532-13176551 Msa0196130:intron 40.0%
!! GACACTTAACCACTTTTCCA+CGG - chr2_1:13176544-13176563 None:intergenic 40.0%
! AGTGTCACTCTATATTCCAC+TGG + chr2_1:13176558-13176577 Msa0196130:intron 40.0%
! ACGGCATATAGGGCATTTAT+TGG - chr2_1:13176757-13176776 None:intergenic 40.0%
TAAGTTCCTCAATTGGCTGA+CGG - chr2_1:13176776-13176795 None:intergenic 40.0%
TCAGCCAATTGAGGAACTTA+TGG + chr2_1:13176776-13176795 Msa0196130:CDS 40.0%
TTGAGGAACTTATGGAGATC+AGG + chr2_1:13176784-13176803 Msa0196130:CDS 40.0%
TGAGGAACTTATGGAGATCA+GGG + chr2_1:13176785-13176804 Msa0196130:CDS 40.0%
TACTGCAGACATGTAAAAGG+GGG - chr2_1:13176907-13176926 None:intergenic 40.0%
CCTTACTGCAGACATGTAAA+AGG - chr2_1:13176910-13176929 None:intergenic 40.0%
! CCTTTTACATGTCTGCAGTA+AGG + chr2_1:13176907-13176926 Msa0196130:three_prime_UTR 40.0%
TACGTGTTTGAGGGAAGATT+TGG + chr2_1:13176993-13177012 Msa0196130:three_prime_UTR 40.0%
! AACCACTGCAAAAGTGTACA+TGG - chr2_1:13177019-13177038 None:intergenic 40.0%
CCGTGTCATCTATACTGTAT+AGG + chr2_1:13177050-13177069 Msa0196130:three_prime_UTR 40.0%
!! TAATAGTAAGGTGGTGGTGG+CGG - chr2_1:13170312-13170331 None:intergenic 45.0%
! GAGTAATAGTAAGGTGGTGG+TGG - chr2_1:13170315-13170334 None:intergenic 45.0%
! TAACTTTGTTGAGGTGGTGG+TGG - chr2_1:13170360-13170379 None:intergenic 45.0%
AAGTAGAATGAATGGGGCTG+TGG - chr2_1:13170426-13170445 None:intergenic 45.0%
! CGATTGGTAGTAGAATTGGG+AGG - chr2_1:13170471-13170490 None:intergenic 45.0%
ATCAACATAAGGAGGTGGAG+TGG - chr2_1:13170595-13170614 None:intergenic 45.0%
! GTTTTCGATGCCGTCTTTGA+TGG + chr2_1:13170717-13170736 Msa0196130:CDS 45.0%
GTAGGATCAGTTCTACTCGA+AGG + chr2_1:13171024-13171043 Msa0196130:intron 45.0%
! GACATGTTTCTAAGCAGTGG+CGG + chr2_1:13171364-13171383 Msa0196130:intron 45.0%
TCATGTTTACGTTGGTGCAG+TGG - chr2_1:13171632-13171651 None:intergenic 45.0%
TGTATTGTAATGCACAGGGG+TGG + chr2_1:13172013-13172032 Msa0196130:intron 45.0%
GTATTGTAATGCACAGGGGT+GGG + chr2_1:13172014-13172033 Msa0196130:intron 45.0%
TATTGTAATGCACAGGGGTG+GGG + chr2_1:13172015-13172034 Msa0196130:intron 45.0%
!! CAAGCCTTATTCCACTAGGT+CGG + chr2_1:13172225-13172244 Msa0196130:intron 45.0%
TTGACCGACCTAGTGGAATA+AGG - chr2_1:13172232-13172251 None:intergenic 45.0%
AGACCTAGAGGTCAATGGTT+TGG - chr2_1:13172305-13172324 None:intergenic 45.0%
AAGGAGAATACATCAGGTCG+AGG - chr2_1:13172386-13172405 None:intergenic 45.0%
CAGTGATGAAAATGCTACGC+AGG - chr2_1:13172527-13172546 None:intergenic 45.0%
TGGCTGTACATTTGGTACCT+CGG - chr2_1:13172868-13172887 None:intergenic 45.0%
!! TTTTACCCAAACCTGACTCG+TGG - chr2_1:13172888-13172907 None:intergenic 45.0%
! TTAACACTGGAAAGGGGTGT+CGG - chr2_1:13172953-13172972 None:intergenic 45.0%
TCAGAGTGGGGATTATAAGC+AGG + chr2_1:13172997-13173016 Msa0196130:intron 45.0%
CAGAGTGGGGATTATAAGCA+GGG + chr2_1:13172998-13173017 Msa0196130:intron 45.0%
AAGCAGGGAAACACATGATC+TGG + chr2_1:13173013-13173032 Msa0196130:intron 45.0%
AGCAGGGAAACACATGATCT+GGG + chr2_1:13173014-13173033 Msa0196130:intron 45.0%
! GGAAACACATGATCTGGGAT+TGG + chr2_1:13173019-13173038 Msa0196130:intron 45.0%
CAAAAGTTCCCTGCTGATGA+TGG + chr2_1:13173117-13173136 Msa0196130:intron 45.0%
AAAACCCTCCATCATCAGCA+GGG - chr2_1:13173128-13173147 None:intergenic 45.0%
TAAAACCCTCCATCATCAGC+AGG - chr2_1:13173129-13173148 None:intergenic 45.0%
!! CAAGTTGCTCTAGAGATCTC+AGG - chr2_1:13173166-13173185 None:intergenic 45.0%
GACTTCCCTCCTCTAACAAT+AGG + chr2_1:13173660-13173679 Msa0196130:intron 45.0%
ACCCCTCTAACATATCCGTA+AGG + chr2_1:13173692-13173711 Msa0196130:intron 45.0%
CCCTTACGGATATGTTAGAG+GGG - chr2_1:13173696-13173715 None:intergenic 45.0%
CCCCTCTAACATATCCGTAA+GGG + chr2_1:13173693-13173712 Msa0196130:intron 45.0%
CCCCTTACGGATATGTTAGA+GGG - chr2_1:13173697-13173716 None:intergenic 45.0%
CCCTCTAACATATCCGTAAG+GGG + chr2_1:13173694-13173713 Msa0196130:intron 45.0%
!! TGGACTCTGAGATAACTCGT+TGG + chr2_1:13174169-13174188 Msa0196130:intron 45.0%
TACGTTGCTGACGTCTAAAC+AGG + chr2_1:13174370-13174389 Msa0196130:intron 45.0%
ACTAGTACCCATTGTGTTGG+TGG + chr2_1:13174458-13174477 Msa0196130:intron 45.0%
ACTTCTCATAGCCAGAACAC+AGG - chr2_1:13175187-13175206 None:intergenic 45.0%
TTGACTGGCACAAATGCATC+AGG - chr2_1:13175480-13175499 None:intergenic 45.0%
! GTCCCCTTTAAGAAAGGAGT+TGG + chr2_1:13175501-13175520 Msa0196130:CDS 45.0%
GGCCAACTCCTTTCTTAAAG+GGG - chr2_1:13175506-13175525 None:intergenic 45.0%
CTGGCCAACTCCTTTCTTAA+AGG - chr2_1:13175508-13175527 None:intergenic 45.0%
CTGAAGGCTGAGCAAATTTC+TGG - chr2_1:13175527-13175546 None:intergenic 45.0%
! CAGAAATTTGCTCAGCCTTC+AGG + chr2_1:13175525-13175544 Msa0196130:CDS 45.0%
GATCTTTCAAAGCCTTCACC+CGG + chr2_1:13175582-13175601 Msa0196130:CDS 45.0%
ATCTTTCAAAGCCTTCACCC+GGG + chr2_1:13175583-13175602 Msa0196130:CDS 45.0%
AAGAGGAAAGACATCTTCCC+CGG - chr2_1:13175604-13175623 None:intergenic 45.0%
! TCAGGAGTTTCGTTTTCCGA+GGG - chr2_1:13175657-13175676 None:intergenic 45.0%
! ATCAGGAGTTTCGTTTTCCG+AGG - chr2_1:13175658-13175677 None:intergenic 45.0%
! GCTTTGATGACAGTGATCCT+GGG + chr2_1:13175847-13175866 Msa0196130:CDS 45.0%
CATATTACACACTCCTTCCC+AGG - chr2_1:13175867-13175886 None:intergenic 45.0%
GGTAAGACAGCTGTATCCTT+TGG - chr2_1:13175900-13175919 None:intergenic 45.0%
! CTCTATATTCCACTGGCTAG+TGG + chr2_1:13176565-13176584 Msa0196130:intron 45.0%
CAATTGGCTGACGGCATATA+GGG - chr2_1:13176767-13176786 None:intergenic 45.0%
TCAATTGGCTGACGGCATAT+AGG - chr2_1:13176768-13176787 None:intergenic 45.0%
TATATGCCGTCAGCCAATTG+AGG + chr2_1:13176767-13176786 Msa0196130:CDS 45.0%
GGGGAGAGAAAAAACTGTCA+TGG - chr2_1:13176825-13176844 None:intergenic 45.0%
ACTGCAGACATGTAAAAGGG+GGG - chr2_1:13176906-13176925 None:intergenic 45.0%
TCCCTAATGTTCACCGAACA+AGG + chr2_1:13177108-13177127 Msa0196130:three_prime_UTR 45.0%
! CCCTTGTTCGGTGAACATTA+GGG - chr2_1:13177112-13177131 None:intergenic 45.0%
CCCTAATGTTCACCGAACAA+GGG + chr2_1:13177109-13177128 Msa0196130:three_prime_UTR 45.0%
! TCCCTTGTTCGGTGAACATT+AGG - chr2_1:13177113-13177132 None:intergenic 45.0%
! CCTTGTTTGCTTCCCTTGTT+CGG - chr2_1:13177124-13177143 None:intergenic 45.0%
CGAACAAGGGAAGCAAACAA+GGG + chr2_1:13177122-13177141 Msa0196130:three_prime_UTR 45.0%
GGGCGAAATATAATGACACC+TGG + chr2_1:13177142-13177161 Msa0196130:three_prime_UTR 45.0%
AATTCAATACGGACCAAGCC+AGG - chr2_1:13177163-13177182 None:intergenic 45.0%
!! AAATATAATAATATTCATTA+TGG + chr2_1:13176037-13176056 Msa0196130:intron 5.0%
! CAGAAAAGAGTACGACTCGG+TGG - chr2_1:13170076-13170095 None:intergenic 50.0%
!! TGGTGGTGGGTGAGAAATCA+CGG - chr2_1:13170146-13170165 None:intergenic 50.0%
TAACAAGATGGGAGTGGTGG+TGG - chr2_1:13170172-13170191 None:intergenic 50.0%
GTGTAAGGAGTAGTTGAGGG+GGG - chr2_1:13170390-13170409 None:intergenic 50.0%
GGTGTAAGGAGTAGTTGAGG+GGG - chr2_1:13170391-13170410 None:intergenic 50.0%
GGGTGTAAGGAGTAGTTGAG+GGG - chr2_1:13170392-13170411 None:intergenic 50.0%
GGGGTGTAAGGAGTAGTTGA+GGG - chr2_1:13170393-13170412 None:intergenic 50.0%
AATGAATGGGGCTGTGGTTG+AGG - chr2_1:13170420-13170439 None:intergenic 50.0%
! AGCAGCAGGAGCGTAAAAAG+GGG - chr2_1:13170565-13170584 None:intergenic 50.0%
! CAGCAGCAGGAGCGTAAAAA+GGG - chr2_1:13170566-13170585 None:intergenic 50.0%
TCGATGCCGTCTTTGATGGA+AGG + chr2_1:13170721-13170740 Msa0196130:CDS 50.0%
CTGGACACATGGTGCATGTT+TGG - chr2_1:13171108-13171127 None:intergenic 50.0%
!! ATAGAAACCTTGGGGGTACC+AGG + chr2_1:13171680-13171699 Msa0196130:intron 50.0%
!! TAGAAACCTTGGGGGTACCA+GGG + chr2_1:13171681-13171700 Msa0196130:intron 50.0%
!! AACAGTGGCGGATCTTCCTT+GGG - chr2_1:13171718-13171737 None:intergenic 50.0%
!! AAACAGTGGCGGATCTTCCT+TGG - chr2_1:13171719-13171738 None:intergenic 50.0%
CATGTAGTTGACCGACCTAG+TGG - chr2_1:13172239-13172258 None:intergenic 50.0%
CACTAGGTCGGTCAACTACA+TGG + chr2_1:13172237-13172256 Msa0196130:intron 50.0%
TCGGAGAACGACTTTGGACA+TGG - chr2_1:13172849-13172868 None:intergenic 50.0%
ATGTCCAAAGTCGTTCTCCG+AGG + chr2_1:13172848-13172867 Msa0196130:intron 50.0%
! CTGACTCGTGGCTGTACATT+TGG - chr2_1:13172876-13172895 None:intergenic 50.0%
CAAATGTACAGCCACGAGTC+AGG + chr2_1:13172874-13172893 Msa0196130:intron 50.0%
TACAGCCACGAGTCAGGTTT+GGG + chr2_1:13172880-13172899 Msa0196130:intron 50.0%
! ACACATGATCTGGGATTGGC+TGG + chr2_1:13173023-13173042 Msa0196130:intron 50.0%
!! AAGTTCCCTGCTGATGATGG+AGG + chr2_1:13173120-13173139 Msa0196130:intron 50.0%
!! AGTTCCCTGCTGATGATGGA+GGG + chr2_1:13173121-13173140 Msa0196130:intron 50.0%
ACGGATATGTTAGAGGGGTC+TGG - chr2_1:13173691-13173710 None:intergenic 50.0%
GCCCCTTACGGATATGTTAG+AGG - chr2_1:13173698-13173717 None:intergenic 50.0%
AACATATCCGTAAGGGGCTG+AGG + chr2_1:13173700-13173719 Msa0196130:intron 50.0%
CTTGCACCTAGAAGCTTCTC+CGG + chr2_1:13174065-13174084 Msa0196130:intron 50.0%
GAAAAGCCGGAGAAGCTTCT+AGG - chr2_1:13174074-13174093 None:intergenic 50.0%
TGCTGACGTCTAAACAGGCA+CGG + chr2_1:13174375-13174394 Msa0196130:intron 50.0%
ACCCAGGTAGAGCTTTCTGT+GGG + chr2_1:13174398-13174417 Msa0196130:intron 50.0%
ACAAAATGCACGGCAGAGAG+AGG + chr2_1:13174600-13174619 Msa0196130:intron 50.0%
CAAAATGCACGGCAGAGAGA+GGG + chr2_1:13174601-13174620 Msa0196130:intron 50.0%
AAAATGCACGGCAGAGAGAG+GGG + chr2_1:13174602-13174621 Msa0196130:intron 50.0%
TTTGCTCAGCCTTCAGGAAC+AGG + chr2_1:13175531-13175550 Msa0196130:CDS 50.0%
TTGCTCAGCCTTCAGGAACA+GGG + chr2_1:13175532-13175551 Msa0196130:CDS 50.0%
AGGTCAATCCCTGTTCCTGA+AGG - chr2_1:13175543-13175562 None:intergenic 50.0%
TCAGGAACAGGGATTGACCT+AGG + chr2_1:13175543-13175562 Msa0196130:CDS 50.0%
TCTTTCAAAGCCTTCACCCG+GGG + chr2_1:13175584-13175603 Msa0196130:CDS 50.0%
AGAGGAAAGACATCTTCCCC+GGG - chr2_1:13175603-13175622 None:intergenic 50.0%
GCATCTAGCACGGAATCATC+AGG - chr2_1:13175675-13175694 None:intergenic 50.0%
ATAGGAAGCTCAGAAGCTGC+AGG + chr2_1:13175825-13175844 Msa0196130:CDS 50.0%
! GGCTTTGATGACAGTGATCC+TGG + chr2_1:13175846-13175865 Msa0196130:CDS 50.0%
TGATGACAGTGATCCTGGGA+AGG + chr2_1:13175851-13175870 Msa0196130:CDS 50.0%
TAGTATTCGCCACTAGCCAG+TGG - chr2_1:13176577-13176596 None:intergenic 50.0%
GTGAGTGTGCAAAAGCTCTG+CGG + chr2_1:13176724-13176743 Msa0196130:CDS 50.0%
TGCAGACATGTAAAAGGGGG+GGG - chr2_1:13176904-13176923 None:intergenic 50.0%
CTGCAGACATGTAAAAGGGG+GGG - chr2_1:13176905-13176924 None:intergenic 50.0%
TTTGGGTGCGTACGTGTTTG+AGG + chr2_1:13176983-13177002 Msa0196130:three_prime_UTR 50.0%
TTGGGTGCGTACGTGTTTGA+GGG + chr2_1:13176984-13177003 Msa0196130:three_prime_UTR 50.0%
! GGCCATGTACACTTTTGCAG+TGG + chr2_1:13177014-13177033 Msa0196130:three_prime_UTR 50.0%
CCGAACAAGGGAAGCAAACA+AGG + chr2_1:13177121-13177140 Msa0196130:three_prime_UTR 50.0%
! TGGTGGGTGAGAAATCACGG+CGG - chr2_1:13170143-13170162 None:intergenic 55.0%
GTTGTGGTGGTTGTGGAGGT+GGG - chr2_1:13170278-13170297 None:intergenic 55.0%
AGTTGTGGTGGTTGTGGAGG+TGG - chr2_1:13170279-13170298 None:intergenic 55.0%
GGAAGTTGTGGTGGTTGTGG+AGG - chr2_1:13170282-13170301 None:intergenic 55.0%
GGTGGAAGTTGTGGTGGTTG+TGG - chr2_1:13170285-13170304 None:intergenic 55.0%
!! CTTTGTTGAGGTGGTGGTGG+AGG - chr2_1:13170357-13170376 None:intergenic 55.0%
! GGGGGTGTAAGGAGTAGTTG+AGG - chr2_1:13170394-13170413 None:intergenic 55.0%
ATGGGGCTGTGGTTGAGGTT+GGG - chr2_1:13170415-13170434 None:intergenic 55.0%
AATGGGGCTGTGGTTGAGGT+TGG - chr2_1:13170416-13170435 None:intergenic 55.0%
GGTGGAGGCCATGCATATTG+CGG - chr2_1:13170537-13170556 None:intergenic 55.0%
TAAAAAGGGGGAGGAGGTGG+AGG - chr2_1:13170552-13170571 None:intergenic 55.0%
! GCAGCAGGAGCGTAAAAAGG+GGG - chr2_1:13170564-13170583 None:intergenic 55.0%
! GCAGCAGCAGGAGCGTAAAA+AGG - chr2_1:13170567-13170586 None:intergenic 55.0%
GGTACCTCGGAGAACGACTT+TGG - chr2_1:13172855-13172874 None:intergenic 55.0%
GTACAGCCACGAGTCAGGTT+TGG + chr2_1:13172879-13172898 Msa0196130:intron 55.0%
AACAGCACCTCAGCCCCTTA+CGG - chr2_1:13173710-13173729 None:intergenic 55.0%
CGGAGAAGCTTCTAGGTGCA+AGG - chr2_1:13174067-13174086 None:intergenic 55.0%
GACCCAGGTAGAGCTTTCTG+TGG + chr2_1:13174397-13174416 Msa0196130:intron 55.0%
GCCCACAGAAAGCTCTACCT+GGG - chr2_1:13174402-13174421 None:intergenic 55.0%
GTAGAGCTTTCTGTGGGCCT+GGG + chr2_1:13174404-13174423 Msa0196130:intron 55.0%
TCCAAATTTAGCGAGGGCCC+AGG - chr2_1:13174424-13174443 None:intergenic 55.0%
AAGACATCTTCCCCGGGTGA+AGG - chr2_1:13175597-13175616 None:intergenic 55.0%
GTGAGGGGATGCATCTAGCA+CGG - chr2_1:13175685-13175704 None:intergenic 55.0%
!! GTGGTGGTGGTTGTGGTGGT+GGG - chr2_1:13170159-13170178 None:intergenic 60.0%
!! AGTGGTGGTGGTTGTGGTGG+TGG - chr2_1:13170160-13170179 None:intergenic 60.0%
!! GATGGGAGTGGTGGTGGTTG+TGG - chr2_1:13170166-13170185 None:intergenic 60.0%
!! GGTGGTGGTGGAAGTTGTGG+TGG - chr2_1:13170291-13170310 None:intergenic 60.0%
!! TAGTAAGGTGGTGGTGGCGG+TGG - chr2_1:13170309-13170328 None:intergenic 60.0%
!! TGTTGAGGTGGTGGTGGAGG+TGG - chr2_1:13170354-13170373 None:intergenic 60.0%
! GGTTGAGGTTGGGGGGTGTA+AGG - chr2_1:13170405-13170424 None:intergenic 60.0%
TGGGGCTGTGGTTGAGGTTG+GGG - chr2_1:13170414-13170433 None:intergenic 60.0%
GCGTAAAAAGGGGGAGGAGG+TGG - chr2_1:13170555-13170574 None:intergenic 60.0%
GGAGCGTAAAAAGGGGGAGG+AGG - chr2_1:13170558-13170577 None:intergenic 60.0%
! GCAGGAGCGTAAAAAGGGGG+AGG - chr2_1:13170561-13170580 None:intergenic 60.0%
GGAGTGGAAGAAGCAGCAGC+AGG - chr2_1:13170579-13170598 None:intergenic 60.0%
! TTCTAGTGGTGCTAGCCGCC+AGG - chr2_1:13171079-13171098 None:intergenic 60.0%
TGGCGGCTAGCACCACTAGA+AGG + chr2_1:13171078-13171097 Msa0196130:intron 60.0%
GGCGGCTAGCACCACTAGAA+GGG + chr2_1:13171079-13171098 Msa0196130:intron 60.0%
CGGATCTTCCTTGGGACCCA+TGG - chr2_1:13171710-13171729 None:intergenic 60.0%
GTCTAAACAGGCACGGACCC+AGG + chr2_1:13174382-13174401 Msa0196130:intron 60.0%
GGCCCACAGAAAGCTCTACC+TGG - chr2_1:13174403-13174422 None:intergenic 60.0%
GGTAGAGCTTTCTGTGGGCC+TGG + chr2_1:13174403-13174422 Msa0196130:intron 60.0%
GCCTGGGCCCTCGCTAAATT+TGG + chr2_1:13174420-13174439 Msa0196130:intron 60.0%
!! GGGAGTGGTGGTGGTTGTGG+TGG - chr2_1:13170163-13170182 None:intergenic 65.0%
!! GGCGGTGGTGGTGGAAGTTG+TGG - chr2_1:13170294-13170313 None:intergenic 65.0%
!! TAAGGTGGTGGTGGCGGTGG+TGG - chr2_1:13170306-13170325 None:intergenic 65.0%
!! GAGGTGGTGGTGGAGGTGGA+GGG - chr2_1:13170350-13170369 None:intergenic 65.0%
!! TGAGGTGGTGGTGGAGGTGG+AGG - chr2_1:13170351-13170370 None:intergenic 65.0%
GGGCTGTGGTTGAGGTTGGG+GGG - chr2_1:13170412-13170431 None:intergenic 65.0%
GGGGCTGTGGTTGAGGTTGG+GGG - chr2_1:13170413-13170432 None:intergenic 65.0%
TGGAAGCCCTGGTACCCCCA+AGG - chr2_1:13171690-13171709 None:intergenic 65.0%
!! TGGGGGTACCAGGGCTTCCA+TGG + chr2_1:13171690-13171709 Msa0196130:intron 65.0%
!! GGGGGTACCAGGGCTTCCAT+GGG + chr2_1:13171691-13171710 Msa0196130:intron 65.0%
CTTGGGACCCATGGAAGCCC+TGG - chr2_1:13171701-13171720 None:intergenic 65.0%
CAGGGCTTCCATGGGTCCCA+AGG + chr2_1:13171699-13171718 Msa0196130:intron 65.0%
!! GGTGGTGGTGGCGGTGGTGG+TGG - chr2_1:13170303-13170322 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 13170068 13177216 13170068 ID=Msa0196130;Name=Msa0196130
chr2_1 mRNA 13170068 13177216 13170068 ID=Msa0196130-mRNA-1;Parent=Msa0196130;Name=Msa0196130-mRNA-1;_AED=0.03;_eAED=0.03;_QI=160|1|1|1|1|1|3|389|380
chr2_1 exon 13170068 13170742 13170068 ID=Msa0196130-mRNA-1:exon:5704;Parent=Msa0196130-mRNA-1
chr2_1 exon 13175419 13175932 13175419 ID=Msa0196130-mRNA-1:exon:5705;Parent=Msa0196130-mRNA-1
chr2_1 exon 13176714 13177216 13176714 ID=Msa0196130-mRNA-1:exon:5706;Parent=Msa0196130-mRNA-1
chr2_1 five_prime_UTR 13170068 13170227 13170068 ID=Msa0196130-mRNA-1:five_prime_utr;Parent=Msa0196130-mRNA-1
chr2_1 CDS 13170228 13170742 13170228 ID=Msa0196130-mRNA-1:cds;Parent=Msa0196130-mRNA-1
chr2_1 CDS 13175419 13175932 13175419 ID=Msa0196130-mRNA-1:cds;Parent=Msa0196130-mRNA-1
chr2_1 CDS 13176714 13176827 13176714 ID=Msa0196130-mRNA-1:cds;Parent=Msa0196130-mRNA-1
chr2_1 three_prime_UTR 13176828 13177216 13176828 ID=Msa0196130-mRNA-1:three_prime_utr;Parent=Msa0196130-mRNA-1
Gene Sequence

>Msa0196130

ATGGGTATTACGTGGAGTAACAGAAGAAGAAACAATTTCATTCAAAACCCACCTCCACAACCACCACAACTTCCACCACCACCGCCACCACCACCTTACTATTACTCAACAGAACAACACCCTCCACCTCCACCACCACCTCAACAAAGTTACTACTATCCCCCCTCAACTACTCCTTACACCCCCCAACCTCAACCACAGCCCCATTCATTCTACTTCTCCAACCCTAACAATAACTATCCTCCCAATTCTACTACCAATCGTATTCAATATCATCCTTCATATCATCTCAATCAACAACAACAACCGCAATATGCATGGCCTCCACCTCCTCCCCCTTTTTACGCTCCTGCTGCTGCTTCTTCCACTCCACCTCCTTATGTTGATCATCAAACTGCTAAAAAGATTAGAAACAATGTTAATGTTCATAAGGATACGCTTCGCCTTGAGATTGATCAGCTTAACCCTGATCATTACCTTGTTTCTTTTGTTTTCGATGCCGTCTTTGATGGAAGCATTACTGTCTTTTACTTTGCGAAGGAAGAAGATAAATGTAGGTTTGTTCCACTCTTTCCTGATGCATTTGTGCCAGTCAAAGTCCCCTTTAAGAAAGGAGTTGGCCAGAAATTTGCTCAGCCTTCAGGAACAGGGATTGACCTAGGCTTCTTTGAGTTAGATGATCTTTCAAAGCCTTCACCCGGGGAAGATGTCTTTCCTCTTGTAATATGCGCTGAAACATGTTTGGAAACTCCCTCGGAAAACGAAACTCCTGATGATTCCGTGCTAGATGCATCCCCTCACATGCAAATTACTCAAGCTGTCTTGGAGAAAAGTAATGGTGGTGGTGCTTTCCAGATAAAAGTAGTTAGACAGATTCTGTGGATTGATGGTGTTCGTTATGAGTTAAGAGAACTATATGGAATAGGAAGCTCAGAAGCTGCAGGCTTTGATGACAGTGATCCTGGGAAGGAGTGTGTAATATGCATGACTGAACCAAAGGATACAGCTGTCTTACCTTGTCGACATATGTGTTTGTGCAGTGAGTGTGCAAAAGCTCTGCGGCTTCAATCCAATAAATGCCCTATATGCCGTCAGCCAATTGAGGAACTTATGGAGATCAGGGTGAAGAGTAGCGATCCATGA
Protein sequence

>Msa0196130

MGITWSNRRRNNFIQNPPPQPPQLPPPPPPPPYYYSTEQHPPPPPPPQQSYYYPPSTTPYTPQPQPQPHSFYFSNPNNNYPPNSTTNRIQYHPSYHLNQQQQPQYAWPPPPPPFYAPAAASSTPPPYVDHQTAKKIRNNVNVHKDTLRLEIDQLNPDHYLVSFVFDAVFDGSITVFYFAKEEDKCRFVPLFPDAFVPVKVPFKKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENETPDDSVLDASPHMQITQAVLEKSNGGGAFQIKVVRQILWIDGVRYELRELYGIGSSEAAGFDDSDPGKECVICMTEPKDTAVLPCRHMCLCSECAKALRLQSNKCPICRQPIEELMEIRVKSSDP*